chr1	779824	779825	chr1:779825:C:G	rs141090730	C	G	.	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	779847	779848	chr1:779848:T:C	rs370780494	T	C	.	Hoxd3_MA0912.1	8	1	-	8.122878961386695	1.2343065018213326	CTGGCCCAATTACTTT
chr1	1161910	1161911	chr1:1161911:C:A	rs61768478	C	A	C	Hoxd3_MA0912.1	1	1	+	8.178241147381502	9.036065420755694	TCGGGCTAATTACAGA
chr1	1250505	1250506	chr1:1250506:A:G	rs149239240	A	G	-	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	1290578	1290579	chr1:1290579:C:G	rs1570867	C	G	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	1951105	1951106	chr1:1951106:G:A	rs2490539	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	2531378	2531379	chr1:2531379:T:C	rs2494603	T	C	.	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	2531395	2531396	chr1:2531396:A:G	rs10910087	A	G	.	Hoxd3_MA0912.1	3	1	+	7.868775965561332	7.754678214522309	TTGAGGCAATGAATCC
chr1	2806779	2806780	chr1:2806780:C:T	rs4648360	C	T	C	Hoxd3_MA0912.1	13	1	+	10.184520435389194	9.58028370687682	TTGGTATAATTATCGT
chr1	2806986	2806987	chr1:2806987:T:G	rs10909872	T	G	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	2928793	2928794	chr1:2928794:A:G	rs77791532	A	G	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	2988138	2988139	chr1:2988139:G:C	rs34083170	G	C	G	Hoxd3_MA0912.1	0	1	-	7.459272143837709	5.474895713954601	CTGTTCCAATTAAGCC
chr1	3153992	3153993	chr1:3153993:A:G	rs183609114	A	G	A	Hoxd3_MA0912.1	8	1	+	8.022317261299815	1.1337448017344547	CTGAAGCAATTAGGCT
chr1	3268290	3268291	chr1:3268291:G:T	rs2455119	G	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	3807425	3807426	chr1:3807426:G:A	rs12723501	G	A	G	Hoxd3_MA0912.1	2	1	-	9.388679713770355	9.85496356191356	CTCAGGTAATTGCCCT
chr1	3846797	3846798	chr1:3846798:A:G	rs540795368	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	3883915	3883916	chr1:3883916:G:T	rs7555538	G	T	t	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	4346258	4346259	chr1:4346259:A:G	rs581219	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	4400201	4400202	chr1:4400202:C:T	rs12043606	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	4436598	4436599	chr1:4436599:C:T	rs1674877	C	T	C	Hoxd3_MA0912.1	12	1	+	8.923252303511768	7.716500383506905	CTGGGCTAATTGCTTC
chr1	4534937	4534938	chr1:4534938:T:G	rs34231005	T	G	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	4618705	4618706	chr1:4618706:G:C	rs6688492	G	C	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	4778085	4778086	chr1:4778086:G:T	rs10915599	G	T	G	Hoxd3_MA0912.1	5	1	+	7.811623756070166	7.940418864275737	CAGTGGTCATTACACC
chr1	4920298	4920299	chr1:4920299:A:G	rs11585512	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	4951249	4951250	chr1:4951250:G:A	rs12411011	G	A	G	Hoxd3_MA0912.1	2	1	+	9.106578994084675	7.656743949927636	AAGAACTAATTACATT
chr1	5251253	5251254	chr1:5251254:T:C	rs11803805	T	C	C	Hoxd3_MA0912.1	8	1	-	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr1	5271808	5271809	chr1:5271809:G:A	rs2945622	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	5271854	5271855	chr1:5271855:T:C	rs4633300	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	5456630	5456631	chr1:5456631:C:T	rs112645865	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	5465630	5465631	chr1:5465631:G:A	rs72855699	G	A	g	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	5578941	5578942	chr1:5578942:G:A	rs147249038	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	5579706	5579707	chr1:5579707:A:G	rs1695635	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	5584503	5584504	chr1:5584504:G:T	rs72860523	G	T	G	Hoxd3_MA0912.1	5	1	-	7.617310070799974	7.081273027687487	GTGAGCCAATTAAACC
chr1	5602841	5602842	chr1:5602842:A:G	rs770689	A	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	5602854	5602855	chr1:5602855:A:G	rs145520185	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr1	5650281	5650282	chr1:5650282:G:A	rs79507074	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	6026584	6026585	chr1:6026585:G:A	rs139698123	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	6153102	6153103	chr1:6153103:G:T	rs6679857	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	6265328	6265329	chr1:6265329:T:C	rs75157532	T	C	c	Hoxd3_MA0912.1	8	1	-	7.121772700779321	0.23320024121395777	CTGGGGCAATGGCCGT
chr1	6322722	6322723	chr1:6322723:G:T	rs72633419	G	T	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	6354105	6354106	chr1:6354106:G:A	rs114967191	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	6971164	6971165	chr1:6971165:T:A	rs6685497	T	A	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	7209262	7209263	chr1:7209263:T:C	rs4908607	T	C	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	7556532	7556533	chr1:7556533:A:C	rs4908656	A	C	A	Hoxd3_MA0912.1	13	1	+	8.197515970386851	8.801752698899225	ATGTGGTCATTACAGC
chr1	7556549	7556550	chr1:7556550:T:C	rs1193159	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	7591288	7591289	chr1:7591289:A:G	rs558594881	A	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	7964531	7964532	chr1:7964532:T:C	rs4908488	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	7973258	7973259	chr1:7973259:C:T	rs58741883	C	T	C	Hoxd3_MA0912.1	4	1	-	9.618934905928048	9.014698177415674	CAGAGATAATTACCTG
chr1	8091163	8091164	chr1:8091164:G:A	rs11121086	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	8121046	8121047	chr1:8121047:A:T	rs2061151	A	T	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	8259163	8259164	chr1:8259164:G:A	rs111292725	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	8259164	8259165	chr1:8259165:T:G	rs573671155	T	G	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	8302399	8302400	chr1:8302400:G:A	rs11121153	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	8302816	8302817	chr1:8302817:A:C	rs57048608	A	C	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	8579297	8579298	chr1:8579298:T:C	rs11121202	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	8638987	8638988	chr1:8638988:T:C	rs6577509	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	8639019	8639020	chr1:8639020:A:G	rs6577510	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	8639622	8639623	chr1:8639623:G:A	rs10779705	G	A	A	Hoxd3_MA0912.1	2	1	-	9.342103852745879	9.808387700889082	ATCTGGTAATTACTCT
chr1	8826270	8826271	chr1:8826271:A:G	rs11799902	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	8835483	8835484	chr1:8835484:G:A	rs6699790	G	A	G	Hoxd3_MA0912.1	15	1	+	8.862085573464665	8.021086946505449	TTTTTTTAATTAGCCG
chr1	8854336	8854337	chr1:8854337:T:C	rs6577538	T	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	8854351	8854352	chr1:8854352:A:G	rs77361602	A	G	A	Hoxd3_MA0912.1	11	1	+	9.556333624344447	7.770407676163455	TGGGTTTAATTACTGT
chr1	8914569	8914570	chr1:8914570:A:G	rs74050935	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	9066051	9066052	chr1:9066052:G:T	rs1705297	G	T	G	Hoxd3_MA0912.1	3	1	+	10.926907505150655	10.476668810057388	ATGGGTTAATTAATCC
chr1	9138551	9138552	chr1:9138552:C:T	rs11487886	C	T	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	9346919	9346920	chr1:9346920:T:C	rs2075972	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr1	9412727	9412728	chr1:9412728:G:A	rs563679168	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	9412743	9412744	chr1:9412744:C:T	rs74051671	C	T	C	Hoxd3_MA0912.1	2	1	-	7.102910032137882	5.653074987980843	CTGGTCTCATGACCGG
chr1	9492357	9492358	chr1:9492358:A:G	chr1:9492358:A:G	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	9828143	9828144	chr1:9828144:C:T	rs1767277	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	9882384	9882385	chr1:9882385:G:C	rs188201124	G	C	G	Hoxd3_MA0912.1	0	1	-	7.869411659978086	5.885035230094976	CTGAGATCATTGATCT
chr1	10664100	10664101	chr1:10664101:G:A	rs145136221	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	10835341	10835342	chr1:10835342:G:A	rs550465695	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	10849350	10849351	chr1:10849351:A:C	rs74359633	A	C	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	11479834	11479835	chr1:11479835:T:C	rs6695628	T	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	11881878	11881879	chr1:11881879:C:T	rs11588551	C	T	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	12096178	12096179	chr1:12096179:A:G	rs11121855	A	G	A	Hoxd3_MA0912.1	8	1	+	8.608302703133937	1.719730243568574	CTGAGCCAATTATATT
chr1	12152083	12152084	chr1:12152084:G:A	rs114444558	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	12384765	12384766	chr1:12384766:A:G	rs114226847	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	12577370	12577371	chr1:12577371:A:C	rs61776828	A	C	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	12581547	12581548	chr1:12581548:A:G	rs11121943	A	G	A	Hoxd3_MA0912.1	0	1	+	7.057565786370646	5.7371179910483425	ATGGACTCATTACGCC
chr1	12599031	12599032	chr1:12599032:C:T	rs150526729	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	12599048	12599049	chr1:12599049:G:A	rs55636637	G	A	G	Hoxd3_MA0912.1	15	1	+	9.610338960506374	8.769340333547158	TTCAGCTAATTAAACG
chr1	13598367	13598368	chr1:13598368:A:G	rs1262460	A	G	a	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	14113446	14113447	chr1:14113447:G:A	rs10928014	G	A	G	Hoxd3_MA0912.1	14	1	-	8.23453226159751	7.670195815465219	CTGGGCTAATTGTACG
chr1	14113474	14113475	chr1:14113475:A:G	rs72862579	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	14266209	14266210	chr1:14266210:C:T	rs80201832	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	14281319	14281320	chr1:14281320:A:G	rs116258744	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	14365422	14365423	chr1:14365423:C:G	rs76719920	C	G	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	14654917	14654918	chr1:14654918:T:A	rs7530665	T	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	14683212	14683213	chr1:14683213:G:A	rs7532295	G	A	G	Hoxd3_MA0912.1	1	1	+	7.828543169371757	8.686367442745949	CGGAGTTAATTGCCTG
chr1	14733451	14733452	chr1:14733452:T:G	rs12096885	T	G	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	14811242	14811243	chr1:14811243:G:A	rs57044337	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	15025410	15025411	chr1:15025411:G:A	rs2871890	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	15075056	15075057	chr1:15075057:A:T	rs61772203	A	T	T	Hoxd3_MA0912.1	6	1	-	8.47637568673664	4.1386846256426	TTGGGCTAATTGCTGA
chr1	15109514	15109515	chr1:15109515:T:C	rs72873829	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	15258866	15258867	chr1:15258867:T:G	rs1927185	T	G	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	16245771	16245772	chr1:16245772:A:G	rs61769794	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	16270433	16270434	chr1:16270434:A:G	rs67829531	A	G	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	16713111	16713112	chr1:16713112:C:A	rs1736699	C	A	.	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	16721715	16721716	chr1:16721716:C:G	rs3856295	C	G	.	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	16721732	16721733	chr1:16721733:A:G	rs9662076	A	G	.	Hoxd3_MA0912.1	0	1	+	9.696016716260566	8.375568920938262	ATGTTTTAATTAAAGC
chr1	16870123	16870124	chr1:16870124:C:G	rs112914085	C	G	c	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	17112858	17112859	chr1:17112859:G:A	rs2746496	G	A	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	17112862	17112863	chr1:17112863:T:C	rs11203301	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	17342067	17342068	chr1:17342068:G:A	rs35903413	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	17384895	17384896	chr1:17384896:G:A	rs72637458	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	17761497	17761498	chr1:17761498:C:T	rs6676457	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	17765989	17765990	chr1:17765990:C:A	rs547494946	C	A	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	17801259	17801260	chr1:17801260:G:A	rs11581277	G	A	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	18134468	18134469	chr1:18134469:T:C	rs79804203	T	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	18564738	18564739	chr1:18564739:C:T	rs11261034	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	18599017	18599018	chr1:18599018:A:T	rs1883583	A	T	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	18725609	18725610	chr1:18725610:C:T	rs114351869	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	18807765	18807766	chr1:18807766:A:G	rs7411058	A	G	A	Hoxd3_MA0912.1	14	1	-	9.195851068529318	9.76018751466161	CTTGCCTAATTACCTT
chr1	18893387	18893388	chr1:18893388:T:C	rs75986840	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	18997743	18997744	chr1:18997744:C:G	rs28690197	C	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	19028483	19028484	chr1:19028484:A:G	rs145985894	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	19690355	19690356	chr1:19690356:G:A	rs2050121	G	A	g	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	19736301	19736302	chr1:19736302:G:T	rs192147021	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	19929105	19929106	chr1:19929106:G:A	rs1093731	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	19929205	19929206	chr1:19929206:G:T	rs6668942	G	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	20604785	20604786	chr1:20604786:C:T	rs111333323	C	T	C	Hoxd3_MA0912.1	3	1	+	8.15703771573635	8.893718938316022	TTGCCCTAATTGCCCT
chr1	20950360	20950361	chr1:20950361:A:G	rs3767248	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	21183064	21183065	chr1:21183065:A:G	rs4654905	A	G	a	Hoxd3_MA0912.1	1	1	-	8.979514527732725	6.895454040196594	ATGCCTTAATTACCTT
chr1	21279810	21279811	chr1:21279811:C:T	rs28367936	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	21410005	21410006	chr1:21410006:A:G	chr1:21410006:A:G	A	G	a	Hoxd3_MA0912.1	9	1	-	10.476668810057388	3.588096350492026	ATGATTTAATTACCTC
chr1	21542056	21542057	chr1:21542057:A:C	rs539472305	A	C	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	21595747	21595748	chr1:21595748:A:G	rs75042787	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	21668365	21668366	chr1:21668366:G:A	rs114988363	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	21779074	21779075	chr1:21779075:C:T	rs6664248	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	21953394	21953395	chr1:21953395:T:C	rs4233281	T	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	22053815	22053816	chr1:22053816:C:T	rs17837945	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	22077951	22077952	chr1:22077952:C:T	rs985608841	C	T	c	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	22205059	22205060	chr1:22205060:C:T	rs17356059	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	22215845	22215846	chr1:22215846:C:A	rs3004222	C	A	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	22215846	22215847	chr1:22215847:C:A	rs2473261	C	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	22252620	22252621	chr1:22252621:C:T	rs10799741	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	22313470	22313471	chr1:22313471:C:T	rs16826892	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	22379904	22379905	chr1:22379905:G:A	rs76906310	G	A	G	Hoxd3_MA0912.1	14	1	+	7.801265122220616	6.857299792456482	TTGAGTTAATTTCCGG
chr1	22483327	22483328	chr1:22483328:T:C	rs1769819	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	22500750	22500751	chr1:22500751:C:T	rs139824941	C	T	C	Hoxd3_MA0912.1	1	1	+	8.975612511460756	11.059672998996886	ACGGGGTAATTAACAT
chr1	22640901	22640902	chr1:22640902:G:A	rs17884494	G	A	g	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	22782607	22782608	chr1:22782608:A:G	rs139994430	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	23351534	23351535	chr1:23351535:T:G	rs72659795	T	G	T	Hoxd3_MA0912.1	1	1	-	7.076715790604688	6.218891517230498	CAGGGCCAATTGCAGT
chr1	23370957	23370958	chr1:23370958:T:C	rs375885150	T	C	T	Hoxd3_MA0912.1	10	1	+	8.963256172525412	2.183572929894985	CTGAAGTAATTGCAGG
chr1	23564925	23564926	chr1:23564926:A:C	rs1883168	A	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	23573961	23573962	chr1:23573962:G:A	rs2742953	G	A	G	Hoxd3_MA0912.1	15	1	-	10.00882962565224	10.786534194240248	TTTGGCTAATTACTCC
chr1	23982421	23982422	chr1:23982422:C:T	rs4543740	C	T	C	Hoxd3_MA0912.1	15	1	+	8.023608589970001	8.80131315855801	CTGACCTAATTGATCC
chr1	24010839	24010840	chr1:24010840:A:G	rs375619845	A	G	A	Hoxd3_MA0912.1	7	1	+	8.01929084276128	1.2396076001308518	CTGAAGTAATTGCAAG
chr1	24150082	24150083	chr1:24150083:A:G	rs186836361	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	24150096	24150097	chr1:24150097:T:C	rs766645300	T	C	T	Hoxd3_MA0912.1	8	1	-	7.657885478015844	0.7693130184504814	CTGAAGTAATGAGGGT
chr1	24191715	24191716	chr1:24191716:T:C	rs10794648	T	C	T	Hoxd3_MA0912.1	1	1	+	8.031406968571355	5.947346481035225	ATGGACTCATTAATCC
chr1	24318379	24318380	chr1:24318380:C:A	rs72652521	C	A	C	Hoxd3_MA0912.1	3	1	-	7.688791128232975	7.2385524331397075	GTGGAGTAATTGCTGT
chr1	24324862	24324863	chr1:24324863:A:C	rs115453535	A	C	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	24382392	24382393	chr1:24382393:C:T	rs12087313	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	24382410	24382411	chr1:24382411:G:A	rs34968455	G	A	G	Hoxd3_MA0912.1	13	1	-	8.141349568546948	7.537112840034574	CTGGGCAAATTAACGT
chr1	24413865	24413866	chr1:24413866:C:T	chr1:24413866:C:T	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	24413867	24413868	chr1:24413868:G:C	rs57545686	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	24704950	24704951	chr1:24704951:C:G	rs183919160	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	24977413	24977414	chr1:24977414:G:A	rs2063112	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	24995684	24995685	chr1:24995685:C:T	rs72657064	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	25168752	25168753	chr1:25168753:G:A	rs143379223	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	25247674	25247675	chr1:25247675:C:T	rs373874377	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	25568559	25568560	chr1:25568560:G:A	rs1008034182	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	25867979	25867980	chr1:25867980:A:G	rs114053951	A	G	A	Hoxd3_MA0912.1	4	1	+	8.077948898644985	8.682185627157361	CTGCACTAATTGACGG
chr1	26061749	26061750	chr1:26061750:C:G	rs2997446	C	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	26181801	26181802	chr1:26181802:G:A	rs3819033	G	A	G	Hoxd3_MA0912.1	5	1	-	7.488147091520242	7.80546853340665	CAGAGCCAATTACTCA
chr1	26306895	26306896	chr1:26306896:A:G	rs4233460	A	G	A	Hoxd3_MA0912.1	11	1	+	8.997268795339842	7.211342847158848	TTAGGTTAATGAAACT
chr1	26472410	26472411	chr1:26472411:A:G	chr1:26472411:A:G	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	26603004	26603005	chr1:26603005:G:T	rs72879054	G	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	26603010	26603011	chr1:26603011:C:A	chr1:26603011:C:A	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	26619674	26619675	chr1:26619675:A:G	rs77111432	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	26788898	26788899	chr1:26788899:A:T	rs41303635	A	T	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	27527453	27527454	chr1:27527454:G:T	rs72884658	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	28322246	28322247	chr1:28322247:A:C	rs75459246	A	C	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	28457132	28457133	chr1:28457133:C:T	rs74064847	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	28848487	28848488	chr1:28848488:T:C	rs498952	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	29368589	29368590	chr1:29368590:C:T	rs6692485	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	29388815	29388816	chr1:29388816:C:T	rs56178150	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	29409303	29409304	chr1:29409304:C:T	rs546079405	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	29428965	29428966	chr1:29428966:A:T	rs7534522	A	T	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	29524795	29524796	chr1:29524796:C:G	rs4256781	C	G	C	Hoxd3_MA0912.1	2	1	-	8.686096149763157	6.902621732069211	AAGTTTTAATTACCTC
chr1	29591839	29591840	chr1:29591840:C:T	rs12121429	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	29620720	29620721	chr1:29620721:G:A	rs9729003	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	29708422	29708423	chr1:29708423:G:A	rs11589959	G	A	G	Hoxd3_MA0912.1	4	1	-	8.843664971425138	9.817506153625846	CTCTCCTAATTAACCT
chr1	29788583	29788584	chr1:29788584:A:G	rs72881796	A	G	t	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	29806453	29806454	chr1:29806454:A:T	rs10914476	A	T	-	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	29807340	29807341	chr1:29807341:T:C	rs2121952	T	C	-	Hoxd3_MA0912.1	0	1	-	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr1	29834869	29834870	chr1:29834870:G:A	rs4614307	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	29855542	29855543	chr1:29855543:A:G	rs6425687	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	29888590	29888591	chr1:29888591:G:A	rs61763491	G	A	g	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	29949854	29949855	chr1:29949855:C:T	rs4949524	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	29956095	29956096	chr1:29956096:A:T	rs2015244	A	T	A	Hoxd3_MA0912.1	1	1	-	8.373421419989986	7.147185205828049	ATGATCCAATTACCTC
chr1	29986564	29986565	chr1:29986565:T:C	rs904300	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	30089218	30089219	chr1:30089219:G:A	rs6661562	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	30220468	30220469	chr1:30220469:G:A	rs13374985	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	30220776	30220777	chr1:30220777:T:C	rs56245189	T	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	30268180	30268181	chr1:30268181:T:C	rs4949570	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	30268212	30268213	chr1:30268213:A:G	rs4949571	A	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	30300787	30300788	chr1:30300788:T:C	rs116419771	T	C	T	Hoxd3_MA0912.1	9	1	+	8.937757866122277	2.0491854065569153	ATGATCCAATTACCCC
chr1	30300808	30300809	chr1:30300809:G:C	rs2377271	G	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	30314321	30314322	chr1:30314322:G:T	rs411289	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	30345742	30345743	chr1:30345743:A:G	rs74068747	A	G	.	Hoxd3_MA0912.1	1	1	+	9.555848177519579	8.698023904145387	CAGAAGTAATTAGACT
chr1	30358633	30358634	chr1:30358634:G:A	rs140786029	G	A	.	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	30368773	30368774	chr1:30368774:A:G	rs75878100	A	G	.	Hoxd3_MA0912.1	13	1	+	9.327136390533061	8.353295208332353	CTAAGCTAATTAAATG
chr1	30448027	30448028	chr1:30448028:G:A	rs593280	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	30460538	30460539	chr1:30460539:G:A	rs12023056	G	A	G	Hoxd3_MA0912.1	7	1	-	7.478336670212938	2.6725957937630294	CTGTGGTCATGAGCCT
chr1	30494538	30494539	chr1:30494539:C:T	rs113372905	C	T	-	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	30603853	30603854	chr1:30603854:C:G	rs7551073	C	G	C	Hoxd3_MA0912.1	5	1	+	8.80302906850958	8.991555402190418	CTGAGCTCATTAAATG
chr1	30615534	30615535	chr1:30615535:C:T	rs57942902	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	30664640	30664641	chr1:30664641:C:T	rs72876407	C	T	C	Hoxd3_MA0912.1	1	1	-	8.045731480813812	8.903555754188003	CGTGTCTAATTACTCT
chr1	30664657	30664658	chr1:30664658:A:G	rs137870159	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	30678471	30678472	chr1:30678472:C:A	rs2700541	C	A	A	Hoxd3_MA0912.1	3	1	-	7.897525905930002	7.447287210836736	TTCGGTCAATTACAGC
chr1	31005742	31005743	chr1:31005743:T:C	rs146796740	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	31152541	31152542	chr1:31152542:C:T	rs12095326	C	T	T	Hoxd3_MA0912.1	4	1	-	7.389736515557024	6.78549978704465	TTGGGCCAATGAAAGC
chr1	31265568	31265569	chr1:31265569:A:G	rs7524117	A	G	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	31412088	31412089	chr1:31412089:C:G	rs7545902	C	G	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	31454901	31454902	chr1:31454902:T:C	rs77874533	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	31522746	31522747	chr1:31522747:C:T	rs1044859760	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	31523659	31523660	chr1:31523660:C:G	rs41263957	C	G	C	Hoxd3_MA0912.1	0	1	+	6.928076474553862	4.943700044670752	CCCAGCTCATTACCCT
chr1	31523687	31523688	chr1:31523688:A:G	rs72662915	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	31550898	31550899	chr1:31550899:C:T	rs6698094	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	31616785	31616786	chr1:31616786:T:G	rs72885456	T	G	T	Hoxd3_MA0912.1	3	1	-	7.304619226234225	6.003601557522261	CCCAGGCAATTAACCT
chr1	31616808	31616809	chr1:31616809:C:G	rs3753612	C	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	31806799	31806800	chr1:31806800:G:A	rs61779651	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	31889918	31889919	chr1:31889919:T:C	rs1790046	T	C	T	Hoxd3_MA0912.1	11	1	-	8.901848704668668	7.1159227564876755	CTTAACTAATTACATC
chr1	31927958	31927959	chr1:31927959:C:T	rs10914504	C	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	31927976	31927977	chr1:31927977:G:T	rs10914505	G	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	31961786	31961787	chr1:31961787:C:T	rs4949486	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	31987114	31987115	chr1:31987115:T:C	rs148705717	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	33036417	33036418	chr1:33036418:T:A	rs76114965	T	A	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	33268378	33268379	chr1:33268379:T:A	rs12034407	T	A	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	33285780	33285781	chr1:33285781:G:T	rs66878579	G	T	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	33459575	33459576	chr1:33459576:T:A	rs7537510	T	A	A	Hoxd3_MA0912.1	5	1	+	7.4368420247666105	6.583483539767716	AAGAGTTAATGGCCCT
chr1	33459584	33459585	chr1:33459585:C:T	rs35253336	C	T	C	Hoxd3_MA0912.1	14	1	+	7.4368420247666105	6.872505578634319	AAGAGTTAATGGCCCT
chr1	34474365	34474366	chr1:34474366:T:C	rs798069	T	C	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	34711003	34711004	chr1:34711004:G:T	rs539009868	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	34835064	34835065	chr1:34835065:C:G	rs11264004	C	G	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	34836259	34836260	chr1:34836260:T:C	rs6689367	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	35215625	35215626	chr1:35215626:C:T	rs12091697	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	36348307	36348308	chr1:36348308:C:T	rs10908300	C	T	T	Hoxd3_MA0912.1	14	1	-	7.115737970683327	6.171772640919192	TTGGAGCAATTGCAGG
chr1	36711180	36711181	chr1:36711181:C:A	chr1:36711181:C:A	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	36765054	36765055	chr1:36765055:C:T	rs1886913	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	36865301	36865302	chr1:36865302:T:G	chr1:36865302:T:G	T	G	T	Hoxd3_MA0912.1	6	1	+	11.11936490504532	4.374728735632989	CTGGGGTAATTAAAAT
chr1	37070532	37070533	chr1:37070533:A:T	rs709297	A	T	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	37078621	37078622	chr1:37078622:A:G	rs218428	A	G	G	Hoxd3_MA0912.1	14	1	-	8.048315577489078	8.612652023621369	CCGAATTAATTGCCTT
chr1	37234747	37234748	chr1:37234748:G:A	rs17508677	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	37275285	37275286	chr1:37275286:C:T	rs55832054	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	37328039	37328040	chr1:37328040:A:C	rs6696660	A	C	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	37593091	37593092	chr1:37593092:T:C	rs10908360	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	37746452	37746453	chr1:37746453:A:G	rs680064	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	38095295	38095296	chr1:38095296:G:A	rs523864	G	A	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	38210281	38210282	chr1:38210282:G:T	rs41270769	G	T	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	38611881	38611882	chr1:38611882:A:G	rs72670919	A	G	A	Hoxd3_MA0912.1	0	1	-	7.714744001191379	7.66223850381345	TTGCTGTAATTGCAGG
chr1	38674232	38674233	chr1:38674233:T:C	rs16825366	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	38777857	38777858	chr1:38777858:G:T	rs16866176	G	T	G	Hoxd3_MA0912.1	13	1	-	7.2262110139089994	6.621974285396625	CTCAGCCAATGAACCT
chr1	38987017	38987018	chr1:38987018:T:C	rs80076808	T	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	39278039	39278040	chr1:39278040:A:T	rs2252549	A	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	39415795	39415796	chr1:39415796:T:A	rs17343193	T	A	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	39683103	39683104	chr1:39683104:G:A	rs147693003	G	A	G	Hoxd3_MA0912.1	15	1	-	8.070337739293073	8.848042307881082	CTGAGGTAATGAGTTC
chr1	39683114	39683115	chr1:39683115:C:A	rs4459101	C	A	C	Hoxd3_MA0912.1	4	1	-	8.070337739293073	7.466101010780701	CTGAGGTAATGAGTTC
chr1	39683136	39683137	chr1:39683137:C:G	rs784632	C	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	39701133	39701134	chr1:39701134:T:G	chr1:39701134:T:G	T	G	T	Hoxd3_MA0912.1	6	1	+	9.088603848410761	2.34396767899843	CTGGGGTAATTATAAG
chr1	39720414	39720415	chr1:39720415:T:C	chr1:39720415:T:C	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	39800188	39800189	chr1:39800189:C:T	rs746787992	C	T	C	Hoxd3_MA0912.1	13	1	+	9.570626017087786	8.966389288575412	CTGGGATAATTATCTC
chr1	39853702	39853703	chr1:39853703:C:T	rs61779834	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	39886912	39886913	chr1:39886913:C:T	rs116654038	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	39990762	39990763	chr1:39990763:G:A	rs3131694	G	A	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	40392446	40392447	chr1:40392447:C:A	rs185110523	C	A	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	40584175	40584176	chr1:40584176:T:C	rs11208461	T	C	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	40584381	40584382	chr1:40584382:G:A	rs11806098	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	40662424	40662425	chr1:40662425:C:G	chr1:40662425:C:G	C	G	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	40662429	40662430	chr1:40662430:T:G	chr1:40662430:T:G	T	G	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	40692258	40692259	chr1:40692259:C:A	rs1240356897	C	A	C	Hoxd3_MA0912.1	6	1	+	8.306409445656753	5.754644332743705	CTGGGGCAATGACCCC
chr1	40703447	40703448	chr1:40703448:T:C	rs2744798	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	40938286	40938287	chr1:40938287:T:C	rs28559846	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	40985763	40985764	chr1:40985764:T:C	rs4430318	T	C	T	Hoxd3_MA0912.1	9	1	+	6.98188889037203	0.09331643080666766	CTGGGCTAATTGGGTC
chr1	41173862	41173863	chr1:41173863:G:C	rs12406305	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	41291384	41291385	chr1:41291385:C:T	rs12035913	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	41366795	41366796	chr1:41366796:T:G	rs78921918	T	G	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr1	41447010	41447011	chr1:41447011:A:G	rs116124041	A	G	.	Hoxd3_MA0912.1	13	1	-	8.56102236681696	9.165259095329334	TTGCCCTAATTACTCC
chr1	41494476	41494477	chr1:41494477:G:A	rs114711091	G	A	G	Hoxd3_MA0912.1	2	1	+	8.266992025397094	6.817156981240054	CTGTAATAATGACCCG
chr1	41540333	41540334	chr1:41540334:T:C	rs2475839	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	41624031	41624032	chr1:41624032:T:C	rs11210499	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	41951840	41951841	chr1:41951841:G:T	rs1408949	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	41953349	41953350	chr1:41953350:A:G	rs78922068	A	G	A	Hoxd3_MA0912.1	8	1	+	8.088454605888797	1.1998821463234344	TTGGGCCAATTACTTA
chr1	42177853	42177854	chr1:42177854:T:C	rs11554182	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	42177863	42177864	chr1:42177864:A:G	rs78061258	A	G	A	Hoxd3_MA0912.1	1	1	+	9.251238140187565	8.393413866813376	TAAGGCTAATTAAAGT
chr1	42753320	42753321	chr1:42753321:G:A	rs149585714	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	42935570	42935571	chr1:42935571:T:G	rs182231082	T	G	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	42955852	42955853	chr1:42955853:C:T	rs3768045	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	43346403	43346404	chr1:43346404:G:A	rs1760670	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	43348246	43348247	chr1:43348247:T:C	rs186944771	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	43513165	43513166	chr1:43513166:T:C	rs11210858	T	C	T	Hoxd3_MA0912.1	1	1	+	9.673759094427217	7.589698606891085	CTGGGATAATTAAAGA
chr1	43515235	43515236	chr1:43515236:A:G	rs16830898	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	43636042	43636043	chr1:43636043:A:T	rs664728	A	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	43708409	43708410	chr1:43708410:G:A	rs7528454	G	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	44013399	44013400	chr1:44013400:A:C	rs558263153	A	C	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	44089805	44089806	chr1:44089806:A:G	rs34200648	A	G	A	Hoxd3_MA0912.1	15	1	-	8.934810340913465	8.157105772325457	ATGAACTAATTGATGT
chr1	44485811	44485812	chr1:44485812:A:T	rs546987973	A	T	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr1	44819375	44819376	chr1:44819376:A:C	rs16832249	A	C	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	45266387	45266388	chr1:45266388:C:A	chr1:45266388:C:A	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	45383258	45383259	chr1:45383259:G:T	rs4660852	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	45864211	45864212	chr1:45864212:G:C	rs6688365	G	C	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	45967429	45967430	chr1:45967430:G:T	rs12029972	G	T	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	46491951	46491952	chr1:46491952:C:A	rs76452763	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	46692813	46692814	chr1:46692814:C:T	rs4660956	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	46719482	46719483	chr1:46719483:G:A	rs17102473	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	47143734	47143735	chr1:47143735:C:T	rs10890469	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	47434224	47434225	chr1:47434225:T:C	rs3814005	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr1	47564663	47564664	chr1:47564664:C:T	rs12138825	C	T	C	Hoxd3_MA0912.1	5	1	+	8.445348985470655	8.762670427357063	CTGAGCTCATTGCCTT
chr1	47564677	47564678	chr1:47564678:G:A	rs11583750	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	47625782	47625783	chr1:47625783:C:T	rs11585515	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	47650073	47650074	chr1:47650074:C:T	rs12402179	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	47650095	47650096	chr1:47650096:A:G	rs76043409	A	G	A	Hoxd3_MA0912.1	0	1	-	9.217425326365221	9.16491982898729	TTGGAACAATTAACTT
chr1	47829046	47829047	chr1:47829047:A:C	rs12070946	A	C	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	47894670	47894671	chr1:47894671:A:C	rs1158930	A	C	A	Hoxd3_MA0912.1	7	1	+	7.923510796339895	5.949568430159375	TTGTGTCAATTAGCAC
chr1	48004310	48004311	chr1:48004311:G:A	rs1022705585	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	48025269	48025270	chr1:48025270:T:C	rs74075345	T	C	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	48025303	48025304	chr1:48025304:T:C	rs74075346	T	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	48051984	48051985	chr1:48051985:A:C	rs11582141	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	48159584	48159585	chr1:48159585:C:A	rs12128656	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	48352279	48352280	chr1:48352280:A:G	rs4926522	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr1	48499748	48499749	chr1:48499749:T:C	rs12021554	T	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	48499811	48499812	chr1:48499812:T:C	rs12021583	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	48611016	48611017	chr1:48611017:C:T	rs894178262	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	48611038	48611039	chr1:48611039:C:T	rs12023224	C	T	C	Hoxd3_MA0912.1	13	1	+	7.522119654632125	6.917882926119751	CTAGGGTCATTAACAC
chr1	48744433	48744434	chr1:48744434:T:A	rs923030	T	A	A	Hoxd3_MA0912.1	1	1	-	9.298585618665879	10.524821832827818	TATAAGTAATTACCTT
chr1	50111037	50111038	chr1:50111038:T:A	rs4357572	T	A	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	50278961	50278962	chr1:50278962:G:A	rs113801687	G	A	G	Hoxd3_MA0912.1	0	1	-	7.770894417982754	7.823399915360685	CGGTGCCAATTACCTT
chr1	50967989	50967990	chr1:50967990:A:G	rs3176446	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	51583975	51583976	chr1:51583976:A:G	rs190425596	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	51583986	51583987	chr1:51583987:A:G	rs11205869	A	G	G	Hoxd3_MA0912.1	7	1	+	8.206918162678694	1.4272349200482664	CTGAACTAATGATCCC
chr1	51949657	51949658	chr1:51949658:T:C	rs2809941	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	52140113	52140114	chr1:52140114:C:G	rs117845895	C	G	C	Hoxd3_MA0912.1	2	1	-	8.390437669237897	6.6069632515439505	TTGAGATCATTAGCGC
chr1	52370040	52370041	chr1:52370041:T:C	rs72899818	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	52707648	52707649	chr1:52707649:C:G	rs437954	C	G	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	53143630	53143631	chr1:53143631:A:G	rs57606030	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	53327416	53327417	chr1:53327417:A:G	rs563206123	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	53546229	53546230	chr1:53546230:A:G	rs540126	A	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	53567754	53567755	chr1:53567755:C:T	rs1037296650	C	T	C	Hoxd3_MA0912.1	5	1	-	7.205629454009426	6.4810660772161	CTGAAGCAATGACCTG
chr1	53576713	53576714	chr1:53576714:A:G	rs941127	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	53576714	53576715	chr1:53576715:T:C	rs941128	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	53608320	53608321	chr1:53608321:C:T	rs12083120	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	53642538	53642539	chr1:53642539:C:G	rs11206185	C	G	C	Hoxd3_MA0912.1	5	1	+	7.245600009620995	7.434126343301832	TGGTGCTAATGAACGC
chr1	53650742	53650743	chr1:53650743:A:G	rs6697692	A	G	A	Hoxd3_MA0912.1	15	1	+	7.4279281358536515	8.268926762812868	CTCCGGTAATTACAGA
chr1	53732531	53732532	chr1:53732532:C:T	rs79380987	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	53732532	53732533	chr1:53732533:G:A	rs797910	G	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	53890195	53890196	chr1:53890196:A:G	rs6588495	A	G	A	Hoxd3_MA0912.1	0	1	+	9.468447430464403	8.1479996351421	ATGAGTCAATTACATT
chr1	54303107	54303108	chr1:54303108:G:C	rs17392881	G	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	54837667	54837668	chr1:54837668:G:T	rs6692540	G	T	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	54915521	54915522	chr1:54915522:C:T	rs12563927	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	55230873	55230874	chr1:55230874:G:A	rs7512894	G	A	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	55353114	55353115	chr1:55353115:T:G	rs60144498	T	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	55353153	55353154	chr1:55353154:T:C	rs60396564	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	55419046	55419047	chr1:55419047:T:C	rs6588558	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	55518839	55518840	chr1:55518840:T:G	rs390415	T	G	G	Hoxd3_MA0912.1	1	1	+	8.690742861876394	6.606682374340265	ATGTGTCAATTACTCC
chr1	55607584	55607585	chr1:55607585:A:G	rs11206636	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	55659065	55659066	chr1:55659066:G:C	rs1949254	G	C	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	55883694	55883695	chr1:55883695:G:A	rs74072547	G	A	G	Hoxd3_MA0912.1	13	1	-	9.09562880788563	8.491392079373256	ATGTTCTAATTACCGA
chr1	55966541	55966542	chr1:55966542:T:C	rs10399899	T	C	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	56077201	56077202	chr1:56077202:T:G	rs1331856	T	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	56150528	56150529	chr1:56150529:A:T	rs952187828	A	T	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	56215224	56215225	chr1:56215225:T:A	rs188582392	T	A	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	56236713	56236714	chr1:56236714:G:A	rs778401	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	56249160	56249161	chr1:56249161:C:T	rs113459309	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	56249188	56249189	chr1:56249189:G:A	rs7548377	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	56302878	56302879	chr1:56302879:C:T	rs12126612	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	56358556	56358557	chr1:56358557:G:T	rs4912418	G	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	56437762	56437763	chr1:56437763:C:A	rs914836	C	A	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	56646548	56646549	chr1:56646549:T:G	rs1124900	T	G	G	Hoxd3_MA0912.1	1	1	+	10.498262029455384	8.414201541919253	GTGATTTAATTAACCT
chr1	56676654	56676655	chr1:56676655:T:A	rs72668305	T	A	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	56878223	56878224	chr1:56878224:C:T	rs2269115	C	T	C	Hoxd3_MA0912.1	13	1	-	10.601975783332385	11.575816965533093	ATGGGGTAATTAAGCT
chr1	57239104	57239105	chr1:57239105:T:C	rs561248	T	C	T	Hoxd3_MA0912.1	9	1	+	7.612355884823838	0.7237834252584763	TTAAGCTCATTGCCCT
chr1	57381402	57381403	chr1:57381403:A:C	rs10493218	A	C	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	57461749	57461750	chr1:57461750:T:A	rs17426688	T	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	57472609	57472610	chr1:57472610:C:G	rs12410761	C	G	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	57861439	57861440	chr1:57861440:G:A	rs763789817	G	A	.	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	58651972	58651973	chr1:58651973:A:C	rs55677434	A	C	a	Hoxd3_MA0912.1	15	1	-	9.344132719277034	8.52012358264734	CACAGGTAATTAATCT
chr1	58783243	58783244	chr1:58783244:C:A	rs4647011	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	58783294	58783295	chr1:58783295:A:C	rs555165165	A	C	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	58785849	58785850	chr1:58785850:C:T	rs72678844	C	T	C	Hoxd3_MA0912.1	15	1	+	8.487710051240253	9.265414619828261	TTGGGTTCATTGCCCC
chr1	58893048	58893049	chr1:58893049:G:C	rs80226064	G	C	G	Hoxd3_MA0912.1	2	1	+	10.02922161186839	8.245747194174442	CTGTTCTAATTAGTCT
chr1	58912189	58912190	chr1:58912190:C:A	rs983208610	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	58935143	58935144	chr1:58935144:G:A	rs6678724	G	A	G	Hoxd3_MA0912.1	3	1	-	7.116542002774999	7.853223225354673	CTGCGGCAATGACTGT
chr1	58943479	58943480	chr1:58943480:G:A	rs72680107	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	59002838	59002839	chr1:59002839:A:G	rs11207366	A	G	a	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	59385482	59385483	chr1:59385483:G:A	rs11582929	G	A	G	Hoxd3_MA0912.1	14	1	+	7.327306870157816	6.383341540393682	GTGGTGTCATTACCGC
chr1	59395146	59395147	chr1:59395147:T:C	rs17481692	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	59594026	59594027	chr1:59594027:T:C	rs34568925	T	C	c	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	59594044	59594045	chr1:59594045:A:T	rs116421204	A	T	a	Hoxd3_MA0912.1	1	1	-	8.801714277113827	7.575478062951889	TTGTGTTAATTGTTGT
chr1	60017464	60017465	chr1:60017465:C:T	rs77821813	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	60037577	60037578	chr1:60037578:G:T	rs631469	G	T	G	Hoxd3_MA0912.1	4	1	+	9.091001162026789	8.486764433514415	CTGAGATAATGACATT
chr1	60174315	60174316	chr1:60174316:T:A	rs6689245	T	A	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	60487894	60487895	chr1:60487895:A:G	rs72673449	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	60487929	60487930	chr1:60487930:T:C	rs34386369	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	60487942	60487943	chr1:60487943:G:A	rs11207621	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	60740322	60740323	chr1:60740323:G:A	rs34263213	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr1	60889840	60889841	chr1:60889841:G:A	rs12121159	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	60920754	60920755	chr1:60920755:T:C	rs580880	T	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	60924740	60924741	chr1:60924741:C:G	rs10889203	C	G	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	60936245	60936246	chr1:60936246:C:T	rs576349	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	60936246	60936247	chr1:60936247:G:C	rs189584640	G	C	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	60970288	60970289	chr1:60970289:G:C	rs558944870	G	C	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	61997372	61997373	chr1:61997373:C:T	rs2067506	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	62127193	62127194	chr1:62127194:T:C	rs72677961	T	C	t	Hoxd3_MA0912.1	9	1	+	11.079270280225039	4.190697820659676	TTGAGATAATTATCCT
chr1	62178445	62178446	chr1:62178446:A:G	rs2481703	A	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	62269949	62269950	chr1:62269950:G:A	rs11803521	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	62760151	62760152	chr1:62760152:C:T	rs11208023	C	T	C	Hoxd3_MA0912.1	12	1	+	9.72774575285276	8.520993832847896	CTTAACTAATTACCAT
chr1	62876797	62876798	chr1:62876798:C:T	rs6587998	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	62926584	62926585	chr1:62926585:G:A	rs4915857	G	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	63007175	63007176	chr1:63007176:T:C	rs7534421	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	63007196	63007197	chr1:63007197:G:A	rs7522596	G	A	G	Hoxd3_MA0912.1	14	1	+	10.08887795294762	9.144912623183487	CTGGACCAATTACCGT
chr1	63330289	63330290	chr1:63330290:C:T	rs75284175	C	T	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	63586397	63586398	chr1:63586398:A:T	rs11208249	A	T	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	63888906	63888907	chr1:63888907:G:A	rs855844	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	64917948	64917949	chr1:64917949:A:T	rs11208537	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	65036843	65036844	chr1:65036844:C:T	rs79695825	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	65151765	65151766	chr1:65151766:T:A	rs10889523	T	A	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	65222705	65222706	chr1:65222706:A:C	rs12022787	A	C	A	Hoxd3_MA0912.1	11	1	+	9.012669310884517	2.2680331414721877	ATGTGATAATTACATG
chr1	66143470	66143471	chr1:66143471:G:A	rs2503174	G	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	66354587	66354588	chr1:66354588:C:T	rs79353179	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	66758646	66758647	chr1:66758647:T:C	rs672230	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	66855132	66855133	chr1:66855133:A:G	rs1104705	A	G	A	Hoxd3_MA0912.1	7	1	+	8.277955900328433	1.4982726576980046	TTGCCCTAATTACCCA
chr1	67134417	67134418	chr1:67134418:C:T	rs12069782	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	67134458	67134459	chr1:67134459:T:C	rs12095536	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	67159425	67159426	chr1:67159426:C:T	chr1:67159426:C:T	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	67453615	67453616	chr1:67453616:A:G	rs114521500	A	G	G	Hoxd3_MA0912.1	1	1	-	9.096760312742239	7.012699825206111	ATGGCATAATTAATGT
chr1	67463800	67463801	chr1:67463801:A:G	rs147964605	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	67533305	67533306	chr1:67533306:C:A	rs4655724	C	A	C	Hoxd3_MA0912.1	4	1	+	9.472716853785837	10.446558035986545	CTGGCCTAATTAATGG
chr1	67535689	67535690	chr1:67535690:G:T	rs4233318	G	T	G	Hoxd3_MA0912.1	14	1	-	7.5559185073521995	6.435537812303618	CTGTGTTAATGGTCCT
chr1	67570948	67570949	chr1:67570949:A:C	rs928729663	A	C	A	Hoxd3_MA0912.1	11	1	+	8.895587680563924	2.150951511151595	CTGGGCCAATGACCCT
chr1	67574506	67574507	chr1:67574507:T:C	rs12127727	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	67599655	67599656	chr1:67599656:A:G	rs787508	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	67604955	67604956	chr1:67604956:T:C	rs115857346	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	67687454	67687455	chr1:67687455:A:G	rs3783474	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	68103237	68103238	chr1:68103238:T:C	rs11805150	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	68143807	68143808	chr1:68143808:T:G	rs2052959	T	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	69195250	69195251	chr1:69195251:A:C	rs10518308	A	C	A	Hoxd3_MA0912.1	1	1	-	8.661177891315887	6.5771174037797575	TTGGGTTCATTGCACT
chr1	69527555	69527556	chr1:69527556:G:A	rs4471216	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	69540731	69540732	chr1:69540732:G:A	rs140759095	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	69605111	69605112	chr1:69605112:G:T	rs1773320	G	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	70045500	70045501	chr1:70045501:G:A	rs17131157	G	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	70245552	70245553	chr1:70245553:A:G	rs1412867	A	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	70441131	70441132	chr1:70441132:T:G	rs59320305	T	G	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	70488250	70488251	chr1:70488251:C:T	rs12094445	C	T	C	Hoxd3_MA0912.1	2	1	-	10.15934736817098	8.709512324013941	ATGAACTAATTACCTC
chr1	70629766	70629767	chr1:70629767:A:G	rs7526430	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	71366051	71366052	chr1:71366052:A:G	rs552897495	A	G	A	Hoxd3_MA0912.1	0	1	-	8.203062272609133	8.150556775231202	TTGTGGTCATTACTCA
chr1	71885235	71885236	chr1:71885236:A:G	rs11209863	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	72037888	72037889	chr1:72037889:C:T	rs570961957	C	T	C	Hoxd3_MA0912.1	4	1	-	9.134403093598111	8.530166365085737	CTCTGTTAATTACAGG
chr1	72064182	72064183	chr1:72064183:T:C	rs12131816	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	73097080	73097081	chr1:73097081:A:G	rs12065149	A	G	A	Hoxd3_MA0912.1	9	1	-	8.198239339145974	1.3096668795806115	CTGAGCTAATTGACAA
chr1	73097092	73097093	chr1:73097093:A:G	rs12122055	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	73518042	73518043	chr1:73518043:A:G	rs12724603	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	73607457	73607458	chr1:73607458:C:G	rs34895167	C	G	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	74647372	74647373	chr1:74647373:C:A	rs1834189	C	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	74674874	74674875	chr1:74674875:A:T	rs7546095	A	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	74946577	74946578	chr1:74946578:T:A	rs67879852	T	A	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	75170840	75170841	chr1:75170841:T:C	rs17096324	T	C	C	Hoxd3_MA0912.1	4	1	+	8.338625751425159	7.364784569224451	TTGCTCTCATTAATCT
chr1	75234661	75234662	chr1:75234662:T:C	rs611309	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	75324655	75324656	chr1:75324656:C:T	rs1249657	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	75347460	75347461	chr1:75347461:T:C	rs17096785	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	75526333	75526334	chr1:75526334:A:G	rs211786	A	G	G	Hoxd3_MA0912.1	9	1	-	9.039617435291035	2.151044975725672	TGGGAGTAATTAATTT
chr1	77020812	77020813	chr1:77020813:G:A	rs199682	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	77539043	77539044	chr1:77539044:A:G	rs181231170	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	77771205	77771206	chr1:77771206:G:A	rs61777140	G	A	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	78038726	78038727	chr1:78038727:T:G	rs6702939	T	G	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	78047091	78047092	chr1:78047092:T:G	rs6424664	T	G	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	78091485	78091486	chr1:78091486:T:G	rs56140793	T	G	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	78177925	78177926	chr1:78177926:C:A	rs17101472	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	78280852	78280853	chr1:78280853:C:G	rs1328444	C	G	G	Hoxd3_MA0912.1	12	1	+	9.372846362962362	8.405324132023333	ATTTGTTAATTACTTT
chr1	78293440	78293441	chr1:78293441:G:T	rs61778176	G	T	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	78494892	78494893	chr1:78494893:C:G	rs12740498	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	78560986	78560987	chr1:78560987:C:A	rs11162507	C	A	C	Hoxd3_MA0912.1	3	1	-	8.678497253767967	8.2282585586747	GTGGGCTAATTACATG
chr1	79051448	79051449	chr1:79051449:G:A	chr1:79051449:G:A	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	79260083	79260084	chr1:79260084:G:C	rs1408371660	G	C	G	Hoxd3_MA0912.1	13	1	-	9.74259541651722	8.164517505804136	TATAGATAATTACCCT
chr1	79260085	79260086	chr1:79260086:T:G	rs12751253	T	G	T	Hoxd3_MA0912.1	11	1	-	9.74259541651722	2.9979592471048906	TATAGATAATTACCCT
chr1	79265204	79265205	chr1:79265205:T:G	rs11162666	T	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	79599572	79599573	chr1:79599573:G:T	rs111767094	G	T	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	79911932	79911933	chr1:79911933:T:G	rs7547365	T	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr1	80050440	80050441	chr1:80050441:G:A	rs12124976	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr1	80064536	80064537	chr1:80064537:G:A	rs7548193	G	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	80382679	80382680	chr1:80382680:T:C	rs67811998	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	80619577	80619578	chr1:80619578:G:T	rs7556395	G	T	G	Hoxd3_MA0912.1	10	1	+	9.044060899568349	11.018003265748868	TTGAAGTAATGACCTG
chr1	80743211	80743212	chr1:80743212:G:T	rs5020501	G	T	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	81314007	81314008	chr1:81314008:G:T	rs17106395	G	T	G	Hoxd3_MA0912.1	12	1	-	8.74421045026164	8.74421045026164	TCGACGTAATTACACT
chr1	81314018	81314019	chr1:81314019:G:A	rs6669537	G	A	G	Hoxd3_MA0912.1	1	1	-	8.74421045026164	10.828270937797772	TCGACGTAATTACACT
chr1	81478161	81478162	chr1:81478162:C:T	rs34104697	C	T	c	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	81478385	81478386	chr1:81478386:A:G	rs111620896	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	81707187	81707188	chr1:81707188:A:G	rs80209424	A	G	A	Hoxd3_MA0912.1	15	1	-	9.938211336403665	9.160506767815656	TTCTGATAATTAACCT
chr1	81743573	81743574	chr1:81743574:C:T	rs79294682	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	81812767	81812768	chr1:81812768:T:C	rs12059795	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	81853282	81853283	chr1:81853283:C:A	rs12144010	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	81926071	81926072	chr1:81926072:A:G	rs1342128	A	G	G	Hoxd3_MA0912.1	3	1	-	7.930678757511824	7.1939975349321506	GTCTGTTAATTACCCG
chr1	82318487	82318488	chr1:82318488:G:A	rs78729203	G	A	G	Hoxd3_MA0912.1	5	1	-	8.707279143088066	9.024600584974475	TTGAACTAATTGCTAT
chr1	82496576	82496577	chr1:82496577:A:G	rs6675779	A	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	82496595	82496596	chr1:82496596:C:T	rs6670990	C	T	C	Hoxd3_MA0912.1	12	1	+	7.205629454009424	5.99887753400456	CTGAAGTAATGGCCTG
chr1	82700884	82700885	chr1:82700885:G:A	rs1433759	G	A	G	Hoxd3_MA0912.1	11	1	+	9.514739562447826	11.30066551062882	TTGGTTTAATTGACAT
chr1	82741255	82741256	chr1:82741256:T:C	rs1409795	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	82797452	82797453	chr1:82797453:G:A	rs115922495	G	A	G	Hoxd3_MA0912.1	13	1	-	9.690568631956113	9.086331903443739	TAGCACTAATTACCCT
chr1	82813874	82813875	chr1:82813875:A:G	rs493742	A	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	82977919	82977920	chr1:82977920:A:T	rs72711212	A	T	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	82991772	82991773	chr1:82991773:T:C	rs539117349	T	C	T	Hoxd3_MA0912.1	6	1	+	9.722902513487009	7.936976565306016	CTGTTATAATTACCTC
chr1	83142043	83142044	chr1:83142044:T:C	rs12410798	T	C	t	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	83218226	83218227	chr1:83218227:C:T	rs550456453	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	83641644	83641645	chr1:83641645:C:T	rs12138207	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr1	83698263	83698264	chr1:83698264:T:C	rs11580318	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	83698300	83698301	chr1:83698301:G:A	rs182133288	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	83960962	83960963	chr1:83960963:T:A	rs17535312	T	A	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	84507787	84507788	chr1:84507788:T:A	rs182706117	T	A	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	84570854	84570855	chr1:84570855:G:T	rs1891126	G	T	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	84785720	84785721	chr1:84785721:T:C	rs9324136	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	84954360	84954361	chr1:84954361:A:C	rs504504	A	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	85003444	85003445	chr1:85003445:A:G	rs6576740	A	G	a	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	85224503	85224504	chr1:85224504:C:A	rs1498380	C	A	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	85244231	85244232	chr1:85244232:C:T	rs7531640	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	85279762	85279763	chr1:85279763:G:A	rs528190547	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	85372109	85372110	chr1:85372110:T:C	rs233050	T	C	T	Hoxd3_MA0912.1	11	1	-	9.531784821615599	7.745858873434605	CAGAATTAATTACTAT
chr1	85491284	85491285	chr1:85491285:G:A	rs562724613	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	85906193	85906194	chr1:85906194:G:A	rs1481202	G	A	A	Hoxd3_MA0912.1	2	1	+	8.48612873909766	7.036293694940622	TTGAAGTCATTACTTC
chr1	85984844	85984845	chr1:85984845:A:G	rs10493781	A	G	A	Hoxd3_MA0912.1	9	1	-	7.989738308259035	1.1011658486936735	CTGATGTCATTGAACT
chr1	86335793	86335794	chr1:86335794:G:C	rs1334141	G	C	G	Hoxd3_MA0912.1	4	1	+	8.20078551171182	6.622707600998737	CTCTGTTCATTACCTT
chr1	86409515	86409516	chr1:86409516:T:C	rs80173692	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	86774988	86774989	chr1:86774989:C:T	rs74097458	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	86988720	86988721	chr1:86988721:A:C	rs185771938	A	C	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	87240261	87240262	chr1:87240262:C:T	rs4623672	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	87344065	87344066	chr1:87344066:A:T	rs6660709	A	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr1	87636247	87636248	chr1:87636248:C:T	rs114298771	C	T	C	Hoxd3_MA0912.1	15	1	-	7.467341815421853	6.626343188462637	CTGGTCTCATTGACCG
chr1	87636269	87636270	chr1:87636270:C:A	chr1:87636270:C:A	C	A	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	87772014	87772015	chr1:87772015:C:A	rs35913405	C	A	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	87873672	87873673	chr1:87873673:C:T	rs72951231	C	T	C	Hoxd3_MA0912.1	1	1	-	8.407510787821918	9.265335061196106	CGGGAGTAATTAGAGT
chr1	87903256	87903257	chr1:87903257:A:T	rs12753599	A	T	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	88013413	88013414	chr1:88013414:C:A	rs6673685	C	A	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	88328146	88328147	chr1:88328147:T:C	rs78901449	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	89405314	89405315	chr1:89405315:A:G	rs4658157	A	G	G	Hoxd3_MA0912.1	9	1	-	7.16562575835058	0.27705329878521784	CTGGGACAATTGAACC
chr1	89602715	89602716	chr1:89602716:T:C	rs12129905	T	C	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	89731735	89731736	chr1:89731736:A:G	rs1462109122	A	G	A	Hoxd3_MA0912.1	13	1	-	9.9661322049266	10.570368933438974	CTCATGTAATTACTCT
chr1	89762481	89762482	chr1:89762482:C:T	rs1458457367	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	89762483	89762484	chr1:89762484:A:C	rs1275526467	A	C	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	89762817	89762818	chr1:89762818:C:A	rs576879	C	A	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	89762825	89762826	chr1:89762826:G:A	chr1:89762826:G:A	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	89883787	89883788	chr1:89883788:C:T	rs17498135	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	89906787	89906788	chr1:89906788:C:A	rs147608973	C	A	C	Hoxd3_MA0912.1	2	1	-	8.43362324171973	7.116432672168987	CTGTAGTCATTACTCC
chr1	89906792	89906793	chr1:89906793:G:A	rs114983867	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	89908114	89908115	chr1:89908115:G:A	rs2816847	G	A	a	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	90075035	90075036	chr1:90075036:A:T	rs2703998	A	T	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	90548792	90548793	chr1:90548793:A:C	rs867434	A	C	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	91011946	91011947	chr1:91011947:T:A	rs145036081	T	A	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	91092145	91092146	chr1:91092146:G:C	rs10922951	G	C	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	91226923	91226924	chr1:91226924:C:T	rs78116664	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	91240867	91240868	chr1:91240868:C:A	rs694581	C	A	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	91263588	91263589	chr1:91263589:A:T	rs4658206	A	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	91548493	91548494	chr1:91548494:G:T	rs963911	G	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	91575944	91575945	chr1:91575945:A:G	rs4658231	A	G	A	Hoxd3_MA0912.1	9	1	-	9.078663942724237	2.1900914831588763	ATGAGTTAATTGCTGC
chr1	91673041	91673042	chr1:91673042:G:A	rs141395440	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	91743108	91743109	chr1:91743109:T:C	rs4658112	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	91777922	91777923	chr1:91777923:A:G	rs11165480	A	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	91777961	91777962	chr1:91777962:C:T	rs4658268	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	91820281	91820282	chr1:91820282:A:G	rs2799539	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	92805774	92805775	chr1:92805775:G:A	rs2180976	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	93080257	93080258	chr1:93080258:A:C	chr1:93080258:A:C	A	C	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	93264031	93264032	chr1:93264032:T:G	rs631966	T	G	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	93630986	93630987	chr1:93630987:C:T	rs145285510	C	T	C	Hoxd3_MA0912.1	12	1	-	9.088564223258539	10.056086454197569	TTGTGGTAATTGGTCT
chr1	93694394	93694395	chr1:93694395:C:A	rs1390740642	C	A	C	Hoxd3_MA0912.1	10	1	-	6.687199637306345	8.661142003486864	CTGGAGTCATGACTGG
chr1	93706215	93706216	chr1:93706216:G:A	rs147095822	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	93711366	93711367	chr1:93711367:A:G	chr1:93711367:A:G	A	G	A	Hoxd3_MA0912.1	5	1	+	7.578898543654617	8.30346192044794	CTGGGACAATGAAAGT
chr1	93840331	93840332	chr1:93840332:C:T	rs12122176	C	T	C	Hoxd3_MA0912.1	6	1	+	7.213433459679091	8.999359407860085	ATGGGGCAATGATCCT
chr1	93874999	93875000	chr1:93875000:G:T	rs4847264	G	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	94040634	94040635	chr1:94040635:G:T	rs6703052	G	T	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	94077213	94077214	chr1:94077214:G:T	rs3120133	G	T	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr1	94335875	94335876	chr1:94335876:C:T	rs550238711	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	94590976	94590977	chr1:94590977:A:G	rs927635	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	94590999	94591000	chr1:94591000:C:T	rs11587053	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr1	94883880	94883881	chr1:94883881:C:T	rs859074	C	T	T	Hoxd3_MA0912.1	13	1	+	9.06583690182023	8.461600173307858	ATGAGTTCATTATCGT
chr1	95022637	95022638	chr1:95022638:C:A	rs1356046925	C	A	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	95234778	95234779	chr1:95234779:A:G	rs181487166	A	G	A	Hoxd3_MA0912.1	10	1	-	7.480414775275889	0.7007315326454608	CTGGAGTCATTACCAA
chr1	95409233	95409234	chr1:95409234:A:G	rs79944397	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	95415303	95415304	chr1:95415304:T:A	rs7551396	T	A	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	95805569	95805570	chr1:95805570:C:T	rs4345843	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	95850717	95850718	chr1:95850718:T:C	rs4949973	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr1	95997137	95997138	chr1:95997138:G:A	rs321263	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	96253485	96253486	chr1:96253486:C:T	rs12085212	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	96321651	96321652	chr1:96321652:A:G	rs9804102	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	96514587	96514588	chr1:96514588:T:C	rs2800425	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	96534524	96534525	chr1:96534525:G:A	rs2208898	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	97252244	97252245	chr1:97252245:G:A	rs116177057	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	97872021	97872022	chr1:97872022:T:A	rs6604093	T	A	T	Hoxd3_MA0912.1	8	1	-	7.942118051180161	3.451440864413167	CTGATTCCATTACTGT
chr1	98020016	98020017	chr1:98020017:C:T	rs9324383	C	T	C	Hoxd3_MA0912.1	4	1	-	8.775275642354911	8.171038913842537	TTGAGTCAATGAAACT
chr1	98516877	98516878	chr1:98516878:T:A	rs116145377	T	A	t	Hoxd3_MA0912.1	14	1	+	8.032411577156257	7.4763673282399665	CTGGCTTCATTACCTG
chr1	98567123	98567124	chr1:98567124:C:G	rs4950134	C	G	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	98826428	98826429	chr1:98826429:G:A	rs12732963	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	98915381	98915382	chr1:98915382:G:A	rs144801578	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	99073197	99073198	chr1:99073198:A:G	rs6680712	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	99170629	99170630	chr1:99170630:T:C	rs670374	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	99441475	99441476	chr1:99441476:T:C	rs7542971	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	99566017	99566018	chr1:99566018:T:C	rs17120680	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr1	99614203	99614204	chr1:99614204:C:T	rs6689789	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	99748686	99748687	chr1:99748687:C:T	rs137958059	C	T	c	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	99766436	99766437	chr1:99766437:T:A	rs6675020	T	A	T	Hoxd3_MA0912.1	8	1	-	9.099942552426018	4.609265365659029	TTGAGCTAATGAGTGT
chr1	100465516	100465517	chr1:100465517:A:C	rs3754131	A	C	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	100529270	100529271	chr1:100529271:C:G	chr1:100529271:C:G	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	100549617	100549618	chr1:100549618:G:C	rs1266051198	G	C	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	100645648	100645649	chr1:100645649:C:A	rs1981134	C	A	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	100757250	100757251	chr1:100757251:A:G	rs1028819	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	100811747	100811748	chr1:100811748:A:T	rs986138	A	T	T	Hoxd3_MA0912.1	8	1	+	9.404441137779237	4.913763951012244	TTTTTGTAATTAACAT
chr1	101205091	101205092	chr1:101205092:T:C	rs138341377	T	C	T	Hoxd3_MA0912.1	0	1	-	8.916585381262049	7.596137585939746	ATTGGGTAATTAATTC
chr1	101205109	101205110	chr1:101205110:C:A	rs7534410	C	A	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	101375605	101375606	chr1:101375606:C:T	rs150007385	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	101457830	101457831	chr1:101457831:A:C	rs7538032	A	C	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	101567811	101567812	chr1:101567812:A:G	rs4908164	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	101623327	101623328	chr1:101623328:A:G	rs10782844	A	G	A	Hoxd3_MA0912.1	6	1	-	8.898590899344306	7.112664951163313	ATGACTTAATTACTTC
chr1	101937454	101937455	chr1:101937455:G:A	rs6678344	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	102353092	102353093	chr1:102353093:A:T	rs1417237	A	T	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	102353093	102353094	chr1:102353094:C:A	rs1417236	C	A	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	103211153	103211154	chr1:103211154:G:C	rs12131462	G	C	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	103426699	103426700	chr1:103426700:T:C	rs978736725	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr1	104559760	104559761	chr1:104559761:A:G	rs61815335	A	G	a	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	105325716	105325717	chr1:105325717:A:C	rs2491614	A	C	C	Hoxd3_MA0912.1	7	1	+	9.84481047391055	7.870868107730032	CTGGGTTAATTGACTC
chr1	105325718	105325719	chr1:105325719:T:A	rs2491613	T	A	A	Hoxd3_MA0912.1	9	1	+	9.84481047391055	5.354133287143559	CTGGGTTAATTGACTC
chr1	105423267	105423268	chr1:105423268:A:C	rs2502908	A	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	105542979	105542980	chr1:105542980:G:A	rs4598541	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	106549959	106549960	chr1:106549960:T:A	rs12077113	T	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	106768499	106768500	chr1:106768500:T:C	rs144257405	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	106964246	106964247	chr1:106964247:A:G	rs10458532	A	G	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	107143795	107143796	chr1:107143796:T:C	rs4481881	T	C	C	Hoxd3_MA0912.1	14	1	+	10.561241824307535	11.125578270439826	ATGTGGTAATTAAATT
chr1	107295092	107295093	chr1:107295093:A:G	rs115809745	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	107525997	107525998	chr1:107525998:T:C	rs11185128	T	C	C	Hoxd3_MA0912.1	10	1	+	8.291350952051548	1.5116677094211215	CTGGTCTCATTGCCCT
chr1	107935182	107935183	chr1:107935183:T:C	rs17020409	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	108107110	108107111	chr1:108107111:T:C	rs9988549	T	C	T	Hoxd3_MA0912.1	5	1	+	8.499086645281896	8.181765203395488	CACAGTTAATTAAGCT
chr1	108120738	108120739	chr1:108120739:A:G	rs1660415	A	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	108121218	108121219	chr1:108121219:C:G	rs665659	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	108141163	108141164	chr1:108141164:C:T	rs11809034	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	108531727	108531728	chr1:108531728:A:G	rs6604133	A	G	a	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	108693278	108693279	chr1:108693279:T:G	rs570317651	T	G	T	Hoxd3_MA0912.1	4	1	-	8.951655119810335	7.977813937609627	CTGAAGTCATTACACG
chr1	108822073	108822074	chr1:108822074:T:C	rs12402255	T	C	T	Hoxd3_MA0912.1	3	1	-	8.32223798383801	8.208140232798986	TTGAGCTCATTAGTGC
chr1	109042566	109042567	chr1:109042567:A:T	rs948773229	A	T	A	Hoxd3_MA0912.1	0	1	-	9.111366546378866	8.394932414440131	TTAATTTCATTAACCT
chr1	109117444	109117445	chr1:109117445:G:A	rs35502610	G	A	g	Hoxd3_MA0912.1	12	1	+	8.675771601643474	9.643293832582504	CAGGGCTAATTGGCCT
chr1	109259408	109259409	chr1:109259409:G:A	rs606007	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	109292608	109292609	chr1:109292609:C:T	rs186279998	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	109530544	109530545	chr1:109530545:C:T	rs115442904	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	109530580	109530581	chr1:109530581:G:C	rs146887897	G	C	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	109632780	109632781	chr1:109632781:G:C	rs529151553	G	C	G	Hoxd3_MA0912.1	12	1	-	7.697016089349831	6.729493858410801	CAGGGCTAATTGCTTC
chr1	109792418	109792419	chr1:109792419:A:G	rs574231736	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	110035315	110035316	chr1:110035316:G:T	rs72976673	G	T	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	110035332	110035333	chr1:110035333:T:C	rs72976674	T	C	C	Hoxd3_MA0912.1	15	1	+	8.358360643374883	7.580656074786876	CCGAGCTAATTATCAT
chr1	110261132	110261133	chr1:110261133:G:A	rs10857817	G	A	A	Hoxd3_MA0912.1	2	1	+	8.707789058769379	7.25795401461234	TTGAAGTCATTACAAT
chr1	110475690	110475691	chr1:110475691:T:C	rs17025855	T	C	T	Hoxd3_MA0912.1	1	1	+	9.318282167989643	7.234221680453513	TTGTGGTAATTGCCTC
chr1	110638342	110638343	chr1:110638343:G:T	rs61803546	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	110714078	110714079	chr1:110714079:A:G	rs343600	A	G	G	Hoxd3_MA0912.1	12	1	+	8.685829424607897	7.718307193668869	TTAAGATAATGAACGT
chr1	110714092	110714093	chr1:110714093:T:G	rs61806010	T	G	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	111241782	111241783	chr1:111241783:G:A	rs5003369	G	A	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	111415070	111415071	chr1:111415071:A:G	rs2485319	A	G	g	Hoxd3_MA0912.1	9	1	-	7.96373331919618	1.0751608596308169	CTGGGGCAATGACCAT
chr1	111438327	111438328	chr1:111438328:T:C	rs2485321	T	C	T	Hoxd3_MA0912.1	3	1	-	9.62883731348685	9.514739562447826	TTGAGTTAATTGAAAT
chr1	111518665	111518666	chr1:111518666:C:A	rs4839141	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	111603352	111603353	chr1:111603353:A:G	rs77788780	A	G	A	Hoxd3_MA0912.1	3	1	-	9.868070036198043	9.13138881361837	TTGTTGTCATTACCCT
chr1	111625143	111625144	chr1:111625144:A:G	rs2364816	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	111833641	111833642	chr1:111833642:G:A	rs12130006	G	A	G	Hoxd3_MA0912.1	3	1	+	8.1511783644065	8.265276115445523	CTGGCACAATTACTCT
chr1	111833669	111833670	chr1:111833670:T:C	rs74888578	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	111919279	111919280	chr1:111919280:A:G	rs1443926	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	111947209	111947210	chr1:111947210:C:T	rs9429614	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	112797683	112797684	chr1:112797684:G:C	rs7555393	G	C	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	113234377	113234378	chr1:113234378:T:A	rs773605	T	A	a	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	113904411	113904412	chr1:113904412:G:C	rs6661817	G	C	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	114082440	114082441	chr1:114082441:A:C	chr1:114082441:A:C	A	C	A	Hoxd3_MA0912.1	11	1	+	9.367795651592544	2.6231594821802147	CTAAATTAATTACCCA
chr1	114764929	114764930	chr1:114764930:G:C	rs111826697	G	C	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	114764939	114764940	chr1:114764940:C:A	rs115328465	C	A	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	114997104	114997105	chr1:114997105:A:G	rs58658580	A	G	a	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	115105934	115105935	chr1:115105935:A:T	rs1852988	A	T	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	115168327	115168328	chr1:115168328:C:T	rs76848264	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	115173474	115173475	chr1:115173475:A:C	rs1286213	A	C	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	115714681	115714682	chr1:115714682:T:C	rs4460638	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr1	116579507	116579508	chr1:116579508:T:C	rs6703791	T	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	116579521	116579522	chr1:116579522:C:A	rs61730484	C	A	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	116755653	116755654	chr1:116755654:G:T	rs112607637	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	116767312	116767313	chr1:116767313:G:T	chr1:116767313:G:T	G	T	G	Hoxd3_MA0912.1	0	1	-	10.2872389596193	9.623310325058494	CTGAAATAATTACCTC
chr1	116887663	116887664	chr1:116887664:C:G	rs12058791	C	G	g	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	117026891	117026892	chr1:117026892:G:A	rs3820495	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	117147290	117147291	chr1:117147291:G:C	rs114955903	G	C	G	Hoxd3_MA0912.1	14	1	-	8.838494543007025	8.662079177722577	CCTGAGTAATTACCCT
chr1	117147299	117147300	chr1:117147300:C:G	rs1892408	C	G	G	Hoxd3_MA0912.1	5	1	-	8.838494543007025	8.649968209326186	CCTGAGTAATTACCCT
chr1	117170135	117170136	chr1:117170136:A:G	rs76778384	A	G	A	Hoxd3_MA0912.1	9	1	-	8.063656975219537	1.1750845156541754	CTGGAGCAATTGCACT
chr1	117216149	117216150	chr1:117216150:G:A	rs6662387	G	A	g	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	117270864	117270865	chr1:117270865:G:T	rs12079298	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	117284949	117284950	chr1:117284950:T:G	rs12133420	T	G	G	Hoxd3_MA0912.1	3	1	-	9.99171717300374	8.690699504291777	TATATTTAATTACCCT
chr1	117838120	117838121	chr1:117838121:G:A	rs147148716	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	118122532	118122533	chr1:118122533:G:A	rs75225209	G	A	G	Hoxd3_MA0912.1	12	1	-	9.555563006593982	8.348811086589118	CTATGGTAATTACCTG
chr1	118264097	118264098	chr1:118264098:G:A	rs7534206	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	118327619	118327620	chr1:118327620:A:G	rs10923545	A	G	G	Hoxd3_MA0912.1	13	1	-	9.872432081545014	10.476668810057388	ATGATTTAATTACTTC
chr1	118636279	118636280	chr1:118636280:T:G	rs1742838	T	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	119186547	119186548	chr1:119186548:T:G	rs6678854	T	G	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	119280186	119280187	chr1:119280187:G:A	chr1:119280187:G:A	G	A	A	Hoxd3_MA0912.1	13	1	-	8.447526059535136	7.843289331022763	CAAGGCTAATTAGCTT
chr1	119280201	119280202	chr1:119280202:A:C	chr1:119280202:A:C	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	119659651	119659652	chr1:119659652:A:G	rs113188994	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	119866601	119866602	chr1:119866602:T:C	rs113153870	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	121308044	121308045	chr1:121308045:C:G	rs138533843	C	G	C	Hoxd3_MA0912.1	14	1	+	6.461262187681804	6.284846822397357	CTGGGTTCATGGACCC
chr1	125067718	125067719	chr1:125067719:C:A	rs1463116071	C	A	.	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	125067724	125067725	chr1:125067725:C:T	rs1286986785	C	T	.	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	145805314	145805315	chr1:145805315:T:C	rs12119499	T	C	T	Hoxd3_MA0912.1	11	1	-	9.36332395626049	7.577398008079498	TTCAGTTAATTAATTG
chr1	145805316	145805317	chr1:145805317:A:G	rs12122368	A	G	G	Hoxd3_MA0912.1	9	1	-	9.36332395626049	2.474751496695127	TTCAGTTAATTAATTG
chr1	147027280	147027281	chr1:147027281:C:T	rs11240087	C	T	.	Hoxd3_MA0912.1	14	1	+	9.922306641335329	9.357970195203038	TTTTGGTAATTATCCT
chr1	147579784	147579785	chr1:147579785:C:T	rs762090307	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	148289776	148289777	chr1:148289777:A:T	rs7515124	A	T	.	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	148371747	148371748	chr1:148371748:T:C	rs1337185426	T	C	.	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	148371749	148371750	chr1:148371750:A:G	rs1409753810	A	G	.	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	150168686	150168687	chr1:150168687:A:G	rs4926391	A	G	G	Hoxd3_MA0912.1	11	1	+	7.33968254866614	5.553756600485147	CTCGGCTCATTACAGC
chr1	150169145	150169146	chr1:150169146:C:T	rs587724276	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	150169151	150169152	chr1:150169152:C:T	rs777520827	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	150169192	150169193	chr1:150169193:A:G	rs73020871	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	150319968	150319969	chr1:150319969:A:C	rs1694379	A	C	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	151096988	151096989	chr1:151096989:G:A	rs116542234	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	151762530	151762531	chr1:151762531:G:A	rs56289123	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	151790825	151790826	chr1:151790826:T:C	rs114057855	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	151992458	151992459	chr1:151992459:C:G	rs41265236	C	G	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	152896468	152896469	chr1:152896469:G:A	rs16834740	G	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	153345974	153345975	chr1:153345975:C:T	rs12070717	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	153749665	153749666	chr1:153749666:G:A	chr1:153749666:G:A	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	153953601	153953602	chr1:153953602:T:C	rs11264680	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	154213037	154213038	chr1:154213038:G:T	rs116039813	G	T	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	154539025	154539026	chr1:154539026:T:C	rs12136771	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	154932702	154932703	chr1:154932703:A:G	rs7543051	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	155075242	155075243	chr1:155075243:C:T	rs11264307	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	156338830	156338831	chr1:156338831:G:C	rs140409834	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	156338874	156338875	chr1:156338875:T:A	chr1:156338875:T:A	T	A	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	156548586	156548587	chr1:156548587:G:A	rs744224	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	156588012	156588013	chr1:156588013:T:G	rs115081393	T	G	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	156588014	156588015	chr1:156588015:G:T	rs35091159	G	T	g	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	156602971	156602972	chr1:156602972:C:T	rs7512734	C	T	T	Hoxd3_MA0912.1	13	1	+	8.357681895203536	7.7534451666911615	TTGTCATAATTGCCCT
chr1	156607996	156607997	chr1:156607997:G:C	rs6427323	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	156673846	156673847	chr1:156673847:C:T	rs923309558	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	156848655	156848656	chr1:156848656:A:G	rs74118778	A	G	A	Hoxd3_MA0912.1	1	1	-	8.224049287569311	6.139988800033182	CTTGGATCATTAAACT
chr1	156893397	156893398	chr1:156893398:G:T	rs3118645	G	T	G	Hoxd3_MA0912.1	13	1	-	8.482100250044851	7.877863521532477	CTGGGTTACTTACCCT
chr1	156893411	156893412	chr1:156893412:G:T	rs2935227	G	T	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	157004468	157004469	chr1:157004469:A:T	rs1161028904	A	T	A	Hoxd3_MA0912.1	6	1	-	7.6638817969537705	3.3261907358597305	TGGGCCTAATTACTCC
chr1	157045084	157045085	chr1:157045085:A:T	rs3806421	A	T	a	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	157217645	157217646	chr1:157217646:G:A	rs7511847	G	A	g	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	157276934	157276935	chr1:157276935:A:G	rs12029503	A	G	-	Hoxd3_MA0912.1	8	1	+	8.49556258926791	1.6069901297025497	TGGGGTTAATTACAGA
chr1	157392209	157392210	chr1:157392210:T:C	rs1853693	T	C	N	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	157472326	157472327	chr1:157472327:G:A	rs11264737	G	A	g	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	158025785	158025786	chr1:158025786:T:C	rs115153924	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	158131382	158131383	chr1:158131383:T:G	rs1570698	T	G	G	Hoxd3_MA0912.1	11	1	-	7.822982227545753	1.078346058133423	CTGTTGTCATTACTTG
chr1	158134519	158134520	chr1:158134520:C:T	rs55737420	C	T	T	Hoxd3_MA0912.1	3	1	-	8.18457515981162	8.298672910850645	CTGGAGTAATTGAACA
chr1	158407236	158407237	chr1:158407237:T:C	rs11579980	T	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	158800058	158800059	chr1:158800059:A:C	rs7536138	A	C	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	158824184	158824185	chr1:158824185:C:T	rs115105755	C	T	c	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	158919371	158919372	chr1:158919372:G:T	rs2793846	G	T	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	159010422	159010423	chr1:159010423:A:T	rs146748131	A	T	A	Hoxd3_MA0912.1	6	1	-	9.167371359474336	4.829680298380296	CTCGGATAATTAATTT
chr1	159010435	159010436	chr1:159010436:C:T	rs856061	C	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	159016357	159016358	chr1:159016358:C:T	chr1:159016358:C:T	C	T	C	Hoxd3_MA0912.1	15	1	-	8.302423842416077	7.461425215456861	ATGGTTTCATTAAACG
chr1	159206699	159206700	chr1:159206700:C:T	rs12042349	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	159206717	159206718	chr1:159206718:A:G	rs863003	A	G	G	Hoxd3_MA0912.1	9	1	-	9.065162542396498	2.1765900828311366	TTGGTTTAATGACTCC
chr1	159436475	159436476	chr1:159436476:G:A	rs7514531	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	159846497	159846498	chr1:159846498:C:G	rs16842694	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	159846522	159846523	chr1:159846523:T:G	rs2501351	T	G	T	Hoxd3_MA0912.1	15	1	+	8.243805579368708	7.419796442739013	CTGTTGTCATTAGACT
chr1	159922938	159922939	chr1:159922939:G:C	rs144507810	G	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	159987574	159987575	chr1:159987575:A:T	rs1316909	A	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	160109612	160109613	chr1:160109613:C:T	rs73023688	C	T	C	Hoxd3_MA0912.1	15	1	+	6.891646897813976	7.669351466401984	CAGGGCCCATTAACCC
chr1	160247178	160247179	chr1:160247179:T:C	rs11265364	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	160257180	160257181	chr1:160257181:C:T	rs10494338	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	160450245	160450246	chr1:160450246:C:T	rs11585691	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	160628112	160628113	chr1:160628113:A:G	rs12733256	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	160705478	160705479	chr1:160705479:G:C	rs12124234	G	C	G	Hoxd3_MA0912.1	0	1	+	9.28619074273313	11.27056717261624	GTGGTCTAATTAATGT
chr1	160724649	160724650	chr1:160724650:G:C	rs499088	G	C	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	160764442	160764443	chr1:160764443:G:T	rs518242	G	T	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	160798385	160798386	chr1:160798386:A:G	rs79514789	A	G	a	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	161002430	161002431	chr1:161002431:T:C	rs2483145	T	C	T	Hoxd3_MA0912.1	0	1	-	9.533997024287913	8.21354922896561	ATTATTTAATTAGCCT
chr1	161009251	161009252	chr1:161009252:T:C	rs117614842	T	C	T	Hoxd3_MA0912.1	0	1	-	9.897133654867313	8.576685859545009	ATGGGATAATTAAAGC
chr1	161009269	161009270	chr1:161009270:C:G	rs2247790	C	G	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	161027180	161027181	chr1:161027181:C:G	rs57839241	C	G	C	Hoxd3_MA0912.1	2	1	-	7.934631512686383	6.151157094992435	GTGAGTCAATTAAACC
chr1	161477763	161477764	chr1:161477764:T:C	rs74849230	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	161743907	161743908	chr1:161743908:A:T	rs147733995	A	T	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	162091856	162091857	chr1:162091857:C:G	rs4657141	C	G	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	162210665	162210666	chr1:162210666:G:A	rs12116744	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	162223428	162223429	chr1:162223429:G:C	rs12124745	G	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	162279906	162279907	chr1:162279907:A:G	rs6659953	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	162291871	162291872	chr1:162291872:A:G	rs4657183	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	162446922	162446923	chr1:162446923:A:T	rs469906	A	T	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	162446967	162446968	chr1:162446968:C:T	rs469881	C	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	162573381	162573382	chr1:162573382:A:G	rs12130399	A	G	a	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	162823991	162823992	chr1:162823992:T:C	rs58273469	T	C	T	Hoxd3_MA0912.1	9	1	+	8.331098575490103	1.4425261159247404	TTGTGACAATTACAGG
chr1	163171700	163171701	chr1:163171701:C:T	rs12041294	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	163196284	163196285	chr1:163196285:T:G	rs7519727	T	G	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	163196310	163196311	chr1:163196311:C:T	rs75598714	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	163227291	163227292	chr1:163227292:T:A	rs6668143	T	A	T	Hoxd3_MA0912.1	9	1	+	8.014337531236237	3.5236603444692456	CAGGTTTAATTGACTC
chr1	163227317	163227318	chr1:163227318:G:A	rs12741687	G	A	g	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	163298854	163298855	chr1:163298855:T:G	rs12725358	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	163574430	163574431	chr1:163574431:C:A	rs867262310	C	A	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	163870349	163870350	chr1:163870350:G:T	rs1289397	G	T	-	Hoxd3_MA0912.1	17	0	-	0	0	.
chr1	163870357	163870358	chr1:163870358:A:G	rs72686839	A	G	-	Hoxd3_MA0912.1	9	1	-	8.71233608127439	1.823763621709028	GTGAGTCAATTAAACT
chr1	164184343	164184344	chr1:164184344:T:C	rs12722820	T	C	T	Hoxd3_MA0912.1	1	1	+	8.643422539706801	6.559362052170669	CTGGGATAATTATACA
chr1	164380644	164380645	chr1:164380645:T:C	rs569319	T	C	T	Hoxd3_MA0912.1	3	1	+	9.275434360400746	8.538753137821075	TTGTAGCAATTAAAGT
chr1	164380659	164380660	chr1:164380660:C:T	rs520941	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	164750823	164750824	chr1:164750824:A:G	rs10918063	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	164794683	164794684	chr1:164794684:G:C	rs60802022	G	C	G	Hoxd3_MA0912.1	13	1	-	8.037230553876181	6.4591526431630975	CTTCCATAATTACCCT
chr1	164972023	164972024	chr1:164972024:G:A	rs16837369	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	165235556	165235557	chr1:165235557:C:T	rs75912260	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	165240728	165240729	chr1:165240729:A:G	rs74365266	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	165284499	165284500	chr1:165284500:C:A	rs114673747	C	A	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	165365644	165365645	chr1:165365645:G:A	rs12076311	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	165375279	165375280	chr1:165375280:G:A	rs11588066	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	165594367	165594368	chr1:165594368:C:T	rs6679871	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	165594552	165594553	chr1:165594553:T:G	rs6692834	T	G	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	165907340	165907341	chr1:165907341:C:T	rs473222	C	T	T	Hoxd3_MA0912.1	13	1	+	8.263785648786335	7.659548920273961	CATAGCTAATTGACGT
chr1	166029905	166029906	chr1:166029906:C:T	rs142861709	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	166037786	166037787	chr1:166037787:C:T	rs1319898	C	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	167360225	167360226	chr1:167360226:A:G	rs117595623	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	167371379	167371380	chr1:167371380:C:T	rs75895426	C	T	C	Hoxd3_MA0912.1	13	1	+	10.515650433759815	9.91141370524744	CAGTTTTAATTACCGT
chr1	167466120	167466121	chr1:167466121:G:A	rs79903733	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	167485949	167485950	chr1:167485950:A:C	rs34000101	A	C	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	167561308	167561309	chr1:167561309:C:T	rs1737476	C	T	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	167638271	167638272	chr1:167638272:G:A	rs947361431	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	167714966	167714967	chr1:167714967:A:G	rs78307832	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	167818026	167818027	chr1:167818027:C:T	rs12060498	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	167962223	167962224	chr1:167962224:T:G	rs7535138	T	G	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	168230018	168230019	chr1:168230019:C:T	rs2235180	C	T	C	Hoxd3_MA0912.1	3	1	-	8.707571262564398	8.821669013603422	CTGGGCTCATGACCCT
chr1	168504120	168504121	chr1:168504121:G:C	rs4639731	G	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	168623180	168623181	chr1:168623181:A:G	rs12058739	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	168925120	168925121	chr1:168925121:C:A	rs12096067	C	A	G	Hoxd3_MA0912.1	12	1	+	9.068100988057642	9.068100988057642	CTCAAATAATTACCCC
chr1	168964229	168964230	chr1:168964230:G:T	rs10489372	G	T	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	169092319	169092320	chr1:169092320:T:C	rs1200115	T	C	t	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	169216648	169216649	chr1:169216649:A:G	rs60378653	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	169270845	169270846	chr1:169270846:A:G	rs10919120	A	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	169591018	169591019	chr1:169591019:C:T	rs3917843	C	T	c	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	169859185	169859186	chr1:169859186:G:A	rs17602701	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	169914394	169914395	chr1:169914395:G:A	rs28652825	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	170545633	170545634	chr1:170545634:T:C	rs112380395	T	C	T	Hoxd3_MA0912.1	9	1	+	8.279351883436773	1.3907794238714102	CTGTGTTAATGACTCA
chr1	170685285	170685286	chr1:170685286:C:T	rs9426909	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	171116746	171116747	chr1:171116747:A:G	rs999033642	A	G	A	Hoxd3_MA0912.1	10	1	-	9.356371657639697	2.5766884150092695	CTGAGCTAATTAGTGA
chr1	171116773	171116774	chr1:171116774:T:C	rs12085248	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	171160795	171160796	chr1:171160796:C:A	rs146579349	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	171251671	171251672	chr1:171251672:C:T	rs13353034	C	T	C	Hoxd3_MA0912.1	5	1	+	6.431183018975724	6.74850446086213	CTGACCCAATGACCGG
chr1	171654700	171654701	chr1:171654701:A:G	rs77145826	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	171743727	171743728	chr1:171743728:C:A	rs7556644	C	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	172120358	172120359	chr1:172120359:C:T	rs115657721	C	T	C	Hoxd3_MA0912.1	13	1	+	8.690742861876394	8.08650613336402	ATGATTCAATTACCTC
chr1	172146013	172146014	chr1:172146014:C:T	rs12120556	C	T	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	172561546	172561547	chr1:172561547:T:C	rs10911920	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	172718417	172718418	chr1:172718418:T:C	rs1492902	T	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	172827120	172827121	chr1:172827121:G:A	rs6662628	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	173267508	173267509	chr1:173267509:T:C	rs2022034	T	C	T	Hoxd3_MA0912.1	0	1	+	10.613161284403498	10.560655787025569	TTGATCTAATTAATGG
chr1	173863667	173863668	chr1:173863668:A:G	rs1322771	A	G	A	Hoxd3_MA0912.1	10	1	-	8.283195946067481	1.503512703437052	CTGTGCTAATTGGTTT
chr1	173960849	173960850	chr1:173960850:C:T	rs1407597	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr1	174258458	174258459	chr1:174258459:T:C	rs60141888	T	C	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	174272026	174272027	chr1:174272027:G:C	rs4652294	G	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	174273666	174273667	chr1:174273667:G:A	rs10912754	G	A	A	Hoxd3_MA0912.1	10	1	+	8.534321218693744	3.7285803422438364	TTGAGGTAATGAAAAC
chr1	174398115	174398116	chr1:174398116:T:C	rs78176042	T	C	T	Hoxd3_MA0912.1	6	1	+	7.403003197260187	5.617077249079195	AAGGGCTCATTACCTG
chr1	174509916	174509917	chr1:174509917:C:A	rs2281010	C	A	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	174815513	174815514	chr1:174815514:A:G	rs72717617	A	G	A	Hoxd3_MA0912.1	3	1	+	7.837398985520407	7.723301234481383	CCCATTTAATTACCCC
chr1	174872245	174872246	chr1:174872246:A:G	rs534851103	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	175181987	175181988	chr1:175181988:T:C	rs2142507	T	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	175220675	175220676	chr1:175220676:C:T	rs12408123	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	175343335	175343336	chr1:175343336:G:A	rs2027866	G	A	G	Hoxd3_MA0912.1	15	1	+	8.376884609975454	7.535885983016238	GTGTAGTAATTACTCG
chr1	175359946	175359947	chr1:175359947:A:C	chr1:175359947:A:C	A	C	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	175359946	175359947	chr1:175359947:A:T	rs2239820	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	175395064	175395065	chr1:175395065:A:T	rs2629484	A	T	t	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	175507060	175507061	chr1:175507061:G:T	rs12081663	G	T	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	175531184	175531185	chr1:175531185:G:C	rs983058	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	175553584	175553585	chr1:175553585:G:A	rs143849441	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	175625992	175625993	chr1:175625993:G:T	rs12032298	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr1	175626789	175626790	chr1:175626790:C:G	rs1323128	C	G	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	175760057	175760058	chr1:175760058:G:A	rs28714480	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	175803241	175803242	chr1:175803242:C:T	rs7535559	C	T	C	Hoxd3_MA0912.1	0	1	+	9.282459878996034	9.334965376373965	CAGAGTTCATTAAACT
chr1	177254536	177254537	chr1:177254537:G:A	rs12744134	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	178021019	178021020	chr1:178021020:G:A	rs6425463	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	180182811	180182812	chr1:180182812:C:T	rs116381512	C	T	C	Hoxd3_MA0912.1	14	1	-	7.479452783818245	6.5354874540541115	CTGGTGCCATTAACGG
chr1	180182825	180182826	chr1:180182826:G:A	chr1:180182826:G:A	G	A	G	Hoxd3_MA0912.1	0	1	-	7.479452783818245	7.531958281196176	CTGGTGCCATTAACGG
chr1	180226693	180226694	chr1:180226694:G:A	rs142559878	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	180244816	180244817	chr1:180244817:C:T	rs56209326	C	T	C	Hoxd3_MA0912.1	13	1	+	8.63307982235912	8.028843093846746	AAGAGTTAATTGCCCC
chr1	180544125	180544126	chr1:180544126:G:C	rs1045595966	G	C	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	180827334	180827335	chr1:180827335:G:A	rs73034733	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	180827350	180827351	chr1:180827351:C:T	rs113700503	C	T	C	Hoxd3_MA0912.1	4	1	+	8.618230871023844	9.59207205322455	ATTACGTAATTACAGT
chr1	180926049	180926050	chr1:180926050:C:T	rs79414434	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	181076096	181076097	chr1:181076097:T:A	rs12061310	T	A	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	181341016	181341017	chr1:181341017:C:T	rs12129667	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	181528138	181528139	chr1:181528139:G:A	rs542093	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	181557558	181557559	chr1:181557559:T:G	rs149123426	T	G	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	181713288	181713289	chr1:181713289:A:G	rs3766996	A	G	A	Hoxd3_MA0912.1	2	1	+	10.003029564898112	11.452864609055151	CTAAGATAATTAAAGT
chr1	182060128	182060129	chr1:182060129:A:G	rs12562893	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	182256423	182256424	chr1:182256424:T:C	rs1936535	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	182292562	182292563	chr1:182292563:A:T	rs4543750	A	T	T	Hoxd3_MA0912.1	1	1	+	9.250432595895449	10.476668810057388	AAGATTTAATTACCTC
chr1	182802025	182802026	chr1:182802026:T:C	rs73065363	T	C	T	Hoxd3_MA0912.1	9	1	+	9.083778127278961	2.1952056677136005	CTTCTTTAATTAATGT
chr1	182838967	182838968	chr1:182838968:A:C	rs115241315	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	182853668	182853669	chr1:182853669:A:G	rs139323481	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	183021512	183021513	chr1:183021513:C:T	rs10911193	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	183105581	183105582	chr1:183105582:T:C	rs148821017	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	183135727	183135728	chr1:183135728:T:A	rs2022392	T	A	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	183209700	183209701	chr1:183209701:G:T	rs3768604	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	183218868	183218869	chr1:183218869:A:T	rs3814338	A	T	A	Hoxd3_MA0912.1	15	1	+	8.80813359211107	10.47314135569998	CTGGCCTAATTAAACA
chr1	183223360	183223361	chr1:183223361:A:G	rs3738824	A	G	A	Hoxd3_MA0912.1	0	1	-	9.130878897937057	9.078373400559128	TTGCTCTAATTGACCT
chr1	183697928	183697929	chr1:183697929:T:G	rs4497174	T	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	183697964	183697965	chr1:183697965:A:G	rs4638079	A	G	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	183780370	183780371	chr1:183780371:G:A	rs2148623	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	184739139	184739140	chr1:184739140:T:C	rs12071631	T	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	184790866	184790867	chr1:184790867:T:C	rs570441	T	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	184854861	184854862	chr1:184854862:A:C	rs639593	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	185044974	185044975	chr1:185044975:T:G	chr1:185044975:T:G	T	G	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	185158092	185158093	chr1:185158093:G:A	rs57853329	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	185366399	185366400	chr1:185366400:T:C	rs7512337	T	C	T	Hoxd3_MA0912.1	15	1	+	8.409852221431821	7.632147652843813	GTGTACTAATTATCCT
chr1	185512651	185512652	chr1:185512652:G:A	rs6424985	G	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	185789881	185789882	chr1:185789882:C:G	rs73062512	C	G	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	186245379	186245380	chr1:186245380:G:T	rs661045	G	T	g	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	186272605	186272606	chr1:186272606:T:C	rs857584	T	C	T	Hoxd3_MA0912.1	7	1	-	9.2121946283609	2.432511385730472	TTGCAATAATTACATT
chr1	186752980	186752981	chr1:186752981:G:A	rs760709	G	A	A	Hoxd3_MA0912.1	3	1	+	8.977953529691959	9.092051280730983	CTGGTTCAATTAAAGG
chr1	186753005	186753006	chr1:186753006:T:A	rs760708	T	A	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	186838563	186838564	chr1:186838564:C:T	rs116488702	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	186894823	186894824	chr1:186894824:T:G	rs12720536	T	G	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	187208113	187208114	chr1:187208114:A:T	rs58834389	A	T	.	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	187210571	187210572	chr1:187210572:A:G	rs2224908	A	G	A	Hoxd3_MA0912.1	1	1	-	8.690742861876394	6.606682374340266	ATGAATCAATTACCTC
chr1	187472627	187472628	chr1:187472628:G:T	rs74135623	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	187854722	187854723	chr1:187854723:A:G	rs2430143	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	187881450	187881451	chr1:187881451:C:T	rs811856	C	T	C	Hoxd3_MA0912.1	12	1	+	10.103707561004446	8.896955640999582	TTGACATAATTACTCT
chr1	187890545	187890546	chr1:187890546:T:A	rs800806	T	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	188106888	188106889	chr1:188106889:T:C	rs4651434	T	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	188271178	188271179	chr1:188271179:G:C	rs11589015	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	188271211	188271212	chr1:188271212:C:G	rs10912298	C	G	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	188325280	188325281	chr1:188325281:A:T	rs28392477	A	T	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	188409279	188409280	chr1:188409280:A:T	rs4550003	A	T	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	188444492	188444493	chr1:188444493:G:A	rs1906764	G	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	188651771	188651772	chr1:188651772:C:T	rs10912463	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	188651810	188651811	chr1:188651811:T:C	rs7413517	T	C	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	189118977	189118978	chr1:189118978:T:C	rs10921311	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	189578343	189578344	chr1:189578344:A:G	rs430676	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	189578370	189578371	chr1:189578371:T:C	rs373412	T	C	C	Hoxd3_MA0912.1	10	1	+	10.240230617895824	3.4605473752653952	CTGGACTAATTATTCT
chr1	189605313	189605314	chr1:189605314:A:G	rs155906	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	189688582	189688583	chr1:189688583:G:A	rs515529	G	A	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	189821526	189821527	chr1:189821527:G:A	rs9427457	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	190303845	190303846	chr1:190303846:G:A	rs10920691	G	A	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	190307429	190307430	chr1:190307430:G:A	rs147479639	G	A	G	Hoxd3_MA0912.1	3	1	+	7.695848275453731	7.809946026492755	CCTGGCTAATTAAAGC
chr1	190353457	190353458	chr1:190353458:T:C	rs185860283	T	C	T	Hoxd3_MA0912.1	9	1	+	10.696428782116445	3.8078563225510824	TTGGTTTAATTAAAAT
chr1	190468057	190468058	chr1:190468058:G:A	rs10920724	G	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	191640869	191640870	chr1:191640870:T:C	rs2814575	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	192318291	192318292	chr1:192318292:G:A	rs6659966	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	192456439	192456440	chr1:192456440:G:C	rs1936680	G	C	C	Hoxd3_MA0912.1	5	1	-	7.9887521168045454	8.177278450485383	CTTCTCTAATTACTGC
chr1	192620047	192620048	chr1:192620048:T:A	rs4147218	T	A	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	192628741	192628742	chr1:192628742:C:A	rs6698245	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	192628749	192628750	chr1:192628750:G:T	rs9988496	G	T	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	192678768	192678769	chr1:192678769:G:T	rs2208960	G	T	t	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	192692812	192692813	chr1:192692813:G:A	rs10921239	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr1	192798173	192798174	chr1:192798174:G:A	rs7546861	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	192975116	192975117	chr1:192975117:G:A	rs78474753	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	193192828	193192829	chr1:193192829:A:G	rs6676878	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr1	193679014	193679015	chr1:193679015:T:C	rs7524872	T	C	T	Hoxd3_MA0912.1	9	1	+	7.617310070799974	0.7287376112346118	GTGAGCCAATTAAACC
chr1	193880525	193880526	chr1:193880526:T:C	rs517206	T	C	C	Hoxd3_MA0912.1	13	1	+	7.219682037211548	7.8239187657239215	CTCTGGTAATTGCTGG
chr1	194865767	194865768	chr1:194865768:A:G	rs12043557	A	G	a	Hoxd3_MA0912.1	9	1	-	8.122878961386697	1.2343065018213324	CTGGCCTAATTGCATT
chr1	195078024	195078025	chr1:195078025:A:G	rs10801387	A	G	G	Hoxd3_MA0912.1	10	1	-	8.684218783811007	1.9045355411805807	CAGAATTAATTAGAGG
chr1	195085402	195085403	chr1:195085403:T:C	rs1831473	T	C	C	Hoxd3_MA0912.1	8	1	-	8.299327537964608	1.4107550783992457	ATGATGTAATTGATGG
chr1	195127825	195127826	chr1:195127826:G:A	rs822674	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	195799424	195799425	chr1:195799425:G:A	rs2942914	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	195849100	195849101	chr1:195849101:T:C	rs10801473	T	C	C	Hoxd3_MA0912.1	4	1	+	8.836086687697604	7.862245505496896	TTGCTGTAATTACACA
chr1	196106110	196106111	chr1:196106111:T:G	rs190286198	T	G	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	196106150	196106151	chr1:196106151:G:C	rs77082752	G	C	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	196181449	196181450	chr1:196181450:A:G	rs72750532	A	G	A	Hoxd3_MA0912.1	3	1	+	9.639643420137123	9.525545669098099	TTGAACTCATTACACT
chr1	196181474	196181475	chr1:196181475:A:G	rs2104405	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	196469818	196469819	chr1:196469819:A:G	rs10801538	A	G	A	Hoxd3_MA0912.1	12	1	-	8.848107648362337	10.0548595683672	CTGTGCTCATTATCGT
chr1	196488244	196488245	chr1:196488245:C:A	rs72732257	C	A	C	Hoxd3_MA0912.1	4	1	+	9.162492222986918	10.136333405187626	TTTGCTTAATTAGCCT
chr1	197787302	197787303	chr1:197787303:C:T	rs1747821	C	T	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	197811427	197811428	chr1:197811428:G:A	rs10922292	G	A	A	Hoxd3_MA0912.1	12	1	-	8.836948482635913	7.630196562631049	TTCAAGCAATTACCCT
chr1	197896807	197896808	chr1:197896808:G:A	rs777856591	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	197915497	197915498	chr1:197915498:T:C	rs115253532	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr1	198065399	198065400	chr1:198065400:G:A	rs72747193	G	A	G	Hoxd3_MA0912.1	15	1	-	8.627845318482375	9.405549887070384	CTGAGCCAATTAAGCC
chr1	198876019	198876020	chr1:198876020:G:A	rs17756214	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	198933199	198933200	chr1:198933200:T:G	rs908415223	T	G	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	199385220	199385221	chr1:199385221:G:A	rs67989929	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	200081861	200081862	chr1:200081862:G:A	rs2247328	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	200081908	200081909	chr1:200081909:C:T	rs2737656	C	T	-	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	200184081	200184082	chr1:200184082:C:G	rs1524161	C	G	G	Hoxd3_MA0912.1	2	1	-	10.284291434410486	8.500817016716539	CTGTAATAATTAATGT
chr1	200436606	200436607	chr1:200436607:A:G	rs16846692	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	200518722	200518723	chr1:200518723:T:A	rs77011304	T	A	T	Hoxd3_MA0912.1	9	1	+	8.760587763323233	4.269910576556242	CTGGAATAATGACAGT
chr1	200722637	200722638	chr1:200722638:C:T	rs530485949	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	200742827	200742828	chr1:200742828:A:G	rs73086632	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	200852329	200852330	chr1:200852330:A:G	rs563223105	A	G	A	Hoxd3_MA0912.1	4	1	-	10.561211161275375	9.587369979074666	CTTATTTAATTACACT
chr1	201171081	201171082	chr1:201171082:G:A	rs1104223	G	A	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	201209341	201209342	chr1:201209342:G:A	rs12757706	G	A	-	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	201270867	201270868	chr1:201270868:C:T	rs4915502	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	201448366	201448367	chr1:201448367:G:T	rs146717510	G	T	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	201464401	201464402	chr1:201464402:A:C	rs592189	A	C	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	201489347	201489348	chr1:201489348:A:T	rs550441968	A	T	A	Hoxd3_MA0912.1	11	1	+	8.51977756811247	4.182086507018429	CTGGGGCAATGACCTT
chr1	201568584	201568585	chr1:201568585:G:A	rs41515251	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	201583312	201583313	chr1:201583313:G:T	rs12133572	G	T	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	201939038	201939039	chr1:201939039:T:G	rs2819367	T	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	202010407	202010408	chr1:202010408:G:A	chr1:202010408:G:A	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	202808932	202808933	chr1:202808933:C:T	rs41302113	C	T	T	Hoxd3_MA0912.1	15	1	+	7.86877687990613	8.646481448494137	CTGTTCTAATTGCATC
chr1	202890639	202890640	chr1:202890640:A:G	rs7531745	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	202959574	202959575	chr1:202959575:G:A	rs6666089	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	203055638	203055639	chr1:203055639:C:T	rs3736314	C	T	c	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr1	203158995	203158996	chr1:203158996:A:G	rs11809836	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	203272298	203272299	chr1:203272299:C:A	rs17533379	C	A	C	Hoxd3_MA0912.1	12	1	+	8.45476410946201	8.45476410946201	TAGGGTTAATTGCAGC
chr1	203461486	203461487	chr1:203461487:A:G	rs147203853	A	G	G	Hoxd3_MA0912.1	13	1	-	11.097441819781436	11.70167854829381	TTGAGCTAATTAATAT
chr1	203666079	203666080	chr1:203666080:G:A	rs6675071	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	203671255	203671256	chr1:203671256:G:A	rs1394097206	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	203773124	203773125	chr1:203773125:G:C	rs7547110	G	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	203935547	203935548	chr1:203935548:A:C	rs2796392	A	C	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	204045564	204045565	chr1:204045565:T:C	rs12133665	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	204190230	204190231	chr1:204190231:C:T	rs76834242	C	T	C	Hoxd3_MA0912.1	14	1	-	8.51130995791585	7.567344628151716	CTGGTGTCATTAAGGT
chr1	204226054	204226055	chr1:204226055:C:T	rs530630061	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	204237166	204237167	chr1:204237167:G:A	rs4284302	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	204398539	204398540	chr1:204398540:G:C	rs3014622	G	C	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	204425218	204425219	chr1:204425219:C:A	rs17334373	C	A	c	Hoxd3_MA0912.1	14	1	-	8.328339945123577	7.940418864275736	CAGAGTTCATTAATGC
chr1	204525307	204525308	chr1:204525308:C:T	rs3789051	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	204618111	204618112	chr1:204618112:G:A	rs3747632	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	204914282	204914283	chr1:204914283:A:G	rs12562359	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	205049132	205049133	chr1:205049133:G:A	rs3767283	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	205237492	205237493	chr1:205237493:G:A	chr1:205237493:G:A	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr1	205356329	205356330	chr1:205356330:G:A	rs2298251	G	A	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	205365810	205365811	chr1:205365811:G:C	rs1928441	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	205583735	205583736	chr1:205583736:G:A	rs10494871	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	205595067	205595068	chr1:205595068:T:A	rs11240532	T	A	A	Hoxd3_MA0912.1	11	1	-	8.330394801808314	3.9927037407142714	TTGGTCCAATTATAGT
chr1	205968398	205968399	chr1:205968399:A:C	rs983489990	A	C	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	206104785	206104786	chr1:206104786:A:G	rs28673467	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	206326443	206326444	chr1:206326444:T:C	chr1:206326444:T:C	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	206444645	206444646	chr1:206444646:G:A	rs6540843	G	A	G	Hoxd3_MA0912.1	4	1	+	8.217432627947263	7.61319589943489	CCAAGGTAATTATCCT
chr1	206522397	206522398	chr1:206522398:G:A	rs12405921	G	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	206673653	206673654	chr1:206673654:T:A	rs148210159	T	A	T	Hoxd3_MA0912.1	4	1	+	8.285326375003919	8.285326375003919	CCGATGTAATTATCCC
chr1	206679754	206679755	chr1:206679755:C:A	rs12043881	C	A	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	206679773	206679774	chr1:206679774:C:G	rs115835379	C	G	C	Hoxd3_MA0912.1	12	1	+	8.849171943822704	7.881649712883673	TAGTCCTAATTACTCT
chr1	206735659	206735660	chr1:206735660:C:T	rs60534074	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	207052788	207052789	chr1:207052789:A:G	rs2629664	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	207309820	207309821	chr1:207309821:A:G	rs7525530	A	G	A	Hoxd3_MA0912.1	9	1	-	8.272711006957708	1.384138547392346	CTGGTCCAATTAAATG
chr1	207499266	207499267	chr1:207499267:G:A	rs4844598	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	207824627	207824628	chr1:207824628:C:A	rs2724375	C	A	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	208037547	208037548	chr1:208037548:A:G	rs12073138	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	208078873	208078874	chr1:208078874:G:A	rs554798685	G	A	G	Hoxd3_MA0912.1	13	1	+	6.367369465661797	7.341210647862506	CCGAGCTAATTGCGGC
chr1	208081144	208081145	chr1:208081145:T:C	chr1:208081145:T:C	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	208081180	208081181	chr1:208081181:A:G	rs148421434	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	208152084	208152085	chr1:208152085:T:C	rs599143	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	208152085	208152086	chr1:208152086:G:A	rs12730195	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	208155532	208155533	chr1:208155533:G:A	rs660668	G	A	A	Hoxd3_MA0912.1	5	1	+	8.877457651151396	8.15289427435807	CTGGAGTCATTAACTG
chr1	208167318	208167319	chr1:208167319:C:T	rs1041521281	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr1	208184469	208184470	chr1:208184470:T:G	rs1781027	T	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	208303901	208303902	chr1:208303902:C:G	rs1198034798	C	G	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	208475647	208475648	chr1:208475648:A:G	chr1:208475648:A:G	A	G	A	Hoxd3_MA0912.1	13	1	-	9.507792482700378	10.112029211212752	CATGGCTAATTACTCT
chr1	208475656	208475657	chr1:208475657:C:T	rs79445772	C	T	C	Hoxd3_MA0912.1	4	1	-	9.507792482700378	8.903555754188003	CATGGCTAATTACTCT
chr1	208475661	208475662	chr1:208475662:C:T	rs138157045	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	208475666	208475667	chr1:208475667:C:T	rs187510779	C	T	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	208476826	208476827	chr1:208476827:T:C	rs59828019	T	C	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	208538746	208538747	chr1:208538747:C:T	rs11119088	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	208631772	208631773	chr1:208631773:C:T	rs75763825	C	T	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	209008874	209008875	chr1:209008875:A:C	rs4554722	A	C	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	209459084	209459085	chr1:209459085:C:T	rs4240834	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	209484302	209484303	chr1:209484303:T:C	rs6671701	T	C	T	Hoxd3_MA0912.1	11	1	-	9.463037921867304	7.67711197368631	TTGCTTTAATTATCTT
chr1	209531399	209531400	chr1:209531400:G:A	rs190111051	G	A	G	Hoxd3_MA0912.1	12	1	-	7.631872569683409	6.425120649678545	GTCAGGTAATTACAGC
chr1	209539543	209539544	chr1:209539544:T:C	rs6703183	T	C	C	Hoxd3_MA0912.1	5	1	+	8.946040133243352	8.628718691356944	CAGTGTTAATTGACTT
chr1	209825705	209825706	chr1:209825706:G:T	rs12731696	G	T	G	Hoxd3_MA0912.1	2	1	+	8.242371868406085	6.925181298855341	TTGTCTTCATTACAGT
chr1	209892799	209892800	chr1:209892800:A:C	rs6674507	A	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	210295653	210295654	chr1:210295654:C:T	rs60154123	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	210295654	210295655	chr1:210295655:A:G	rs669189	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	210332786	210332787	chr1:210332787:A:G	rs191276891	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	210332823	210332824	chr1:210332824:T:C	rs590883	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr1	210812667	210812668	chr1:210812668:G:A	rs1891661	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	211634051	211634052	chr1:211634052:T:A	rs56320548	T	A	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr1	211694357	211694358	chr1:211694358:C:T	rs7548374	C	T	C	Hoxd3_MA0912.1	13	1	+	9.269358361682649	8.665121633170275	CCGATGTAATTACCGG
chr1	212070808	212070809	chr1:212070809:T:C	rs17018430	T	C	T	Hoxd3_MA0912.1	0	1	+	9.28976021477704	9.237254717399109	TTGAGCTCATTAAAGC
chr1	212201587	212201588	chr1:212201588:A:G	rs4951578	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	212201630	212201631	chr1:212201631:T:C	rs17018717	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	212434061	212434062	chr1:212434062:C:T	rs3767868	C	T	C	Hoxd3_MA0912.1	14	1	+	10.333427008730844	9.769090562598553	CTGAGTTAATTGGCCT
chr1	212470081	212470082	chr1:212470082:T:G	rs72754368	T	G	T	Hoxd3_MA0912.1	10	1	+	7.687114223539174	5.713171857358656	CTGGACTCATTGCTCT
chr1	212474792	212474793	chr1:212474793:T:C	rs748517	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	212613682	212613683	chr1:212613683:T:C	rs11571537	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr1	212624547	212624548	chr1:212624548:A:G	rs7533306	A	G	G	Hoxd3_MA0912.1	9	1	-	9.872964847236567	2.9843923876712046	TTTTTTTAATTACAGT
chr1	212636233	212636234	chr1:212636234:G:A	rs72756379	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	212636263	212636264	chr1:212636264:C:T	rs3123536	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	212984033	212984034	chr1:212984034:T:G	rs76168977	T	G	T	Hoxd3_MA0912.1	7	1	-	9.002222981315978	7.0282806151354595	GTGGATTAATTAATCC
chr1	213486587	213486588	chr1:213486588:A:G	rs4655421	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	213979620	213979621	chr1:213979621:C:G	rs72753585	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	213984251	213984252	chr1:213984252:T:C	rs4140385	T	C	T	Hoxd3_MA0912.1	14	1	-	9.040673722641737	9.98463905240587	AAGGGCTAATTACAAT
chr1	213990920	213990921	chr1:213990921:A:T	rs116566314	A	T	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	214042449	214042450	chr1:214042450:C:T	rs74327358	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	214111521	214111522	chr1:214111522:G:C	rs74139611	G	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	214143357	214143358	chr1:214143358:C:G	rs1978911	C	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	214992217	214992218	chr1:214992218:C:A	rs10864142	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr1	216523879	216523880	chr1:216523880:A:G	rs144112469	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	216779750	216779751	chr1:216779751:C:G	rs12064264	C	G	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	216949419	216949420	chr1:216949420:T:A	rs2818757	T	A	A	Hoxd3_MA0912.1	6	1	+	8.81794113352264	4.480250072428599	ATGAGATCATTACCCC
chr1	217077906	217077907	chr1:217077907:T:C	rs551842466	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	217140142	217140143	chr1:217140143:T:G	rs141511136	T	G	T	Hoxd3_MA0912.1	0	1	-	9.309983546967121	9.973912181527927	ATGTGTTAATTAAAAG
chr1	217193272	217193273	chr1:217193273:T:C	rs58235281	T	C	T	Hoxd3_MA0912.1	8	1	-	8.093169017455956	1.204596557890593	TAGCTGCAATTAACCT
chr1	217300595	217300596	chr1:217300596:T:A	rs12751523	T	A	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	217536241	217536242	chr1:217536242:A:T	rs7525118	A	T	A	Hoxd3_MA0912.1	5	1	-	9.982118062919177	9.128759577920283	GTGAGTTAATTAACAT
chr1	217839345	217839346	chr1:217839346:G:A	rs60677734	G	A	G	Hoxd3_MA0912.1	13	1	-	8.386898892487896	7.782662163975521	CTGCCATAATTAGCCT
chr1	217921292	217921293	chr1:217921293:T:C	rs28515640	T	C	T	Hoxd3_MA0912.1	3	1	-	8.621417833813096	8.507320082774072	TTGATGTCATTATTCT
chr1	218330295	218330296	chr1:218330296:T:G	rs938168489	T	G	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	218474043	218474044	chr1:218474044:T:C	rs623356	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	218697365	218697366	chr1:218697366:T:C	rs4012186	T	C	T	Hoxd3_MA0912.1	1	1	+	8.198811030486825	6.114750542950693	ATGGTTTAATGAGCTT
chr1	218712395	218712396	chr1:218712396:T:C	rs74143207	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	218786206	218786207	chr1:218786207:G:A	rs142555556	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	219092037	219092038	chr1:219092038:T:A	rs1256567	T	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	219384854	219384855	chr1:219384855:G:C	rs17526867	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	219517100	219517101	chr1:219517101:A:T	rs77409379	A	T	A	Hoxd3_MA0912.1	1	1	-	11.038057730980865	9.811821516818926	ATGATTTAATTACAGT
chr1	219517112	219517113	chr1:219517113:C:T	rs80327647	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	219666526	219666527	chr1:219666527:A:G	rs1057029357	A	G	A	Hoxd3_MA0912.1	7	1	+	8.156062754977553	1.3763795123471245	TTGGGGCAATTGCTTT
chr1	219991819	219991820	chr1:219991820:T:C	rs1694577	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr1	219991823	219991824	chr1:219991824:T:C	rs3767669	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	220487540	220487541	chr1:220487541:G:A	rs996453877	G	A	g	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr1	220888237	220888238	chr1:220888238:G:A	rs6682092	G	A	G	Hoxd3_MA0912.1	13	1	-	8.15289427435807	7.548657545845696	CTGGTATAATGACCTG
chr1	220943624	220943625	chr1:220943625:G:A	rs2807876	G	A	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	221141391	221141392	chr1:221141392:T:C	rs718434	T	C	T	Hoxd3_MA0912.1	5	1	+	9.971513439947422	9.654191998061014	TTGAGTCAATTAAACC
chr1	221393777	221393778	chr1:221393778:T:C	rs112725868	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	221394232	221394233	chr1:221394233:C:T	rs1319054119	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	221620910	221620911	chr1:221620911:T:C	rs17010428	T	C	T	Hoxd3_MA0912.1	15	1	+	8.98955686173206	8.211852293144052	ATTAGGTAATTATTGT
chr1	221638820	221638821	chr1:221638821:C:G	rs371839867	C	G	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	221663827	221663828	chr1:221663828:C:T	rs11118809	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	221695063	221695064	chr1:221695064:G:A	rs6687398	G	A	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	221777014	221777015	chr1:221777015:T:G	rs77067615	T	G	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	221782699	221782700	chr1:221782700:C:A	rs144389361	C	A	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	221782743	221782744	chr1:221782744:G:A	rs4073062	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr1	222597360	222597361	chr1:222597361:A:G	rs1909194	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr1	222644075	222644076	chr1:222644076:A:G	rs143450225	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	222644100	222644101	chr1:222644101:C:T	rs77830841	C	T	C	Hoxd3_MA0912.1	5	1	+	8.499198989519462	8.816520431405868	CTGGCCTCATTACTCT
chr1	222644129	222644130	chr1:222644130:G:T	rs78606358	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr1	223009664	223009665	chr1:223009665:C:A	rs2609354	C	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	223017894	223017895	chr1:223017895:C:A	rs4846786	C	A	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr1	223036776	223036777	chr1:223036777:C:G	rs2789922	C	G	C	Hoxd3_MA0912.1	14	1	+	8.534753726977456	8.35833836169301	CTGAGTTCATGACACT
chr1	223050871	223050872	chr1:223050872:G:A	rs4846790	G	A	g	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	223248433	223248434	chr1:223248434:C:T	rs147074141	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr1	223515860	223515861	chr1:223515861:C:G	rs79681010	C	G	C	Hoxd3_MA0912.1	3	1	-	7.165278521790487	5.978358604117545	GTGGGCTCATTAGCTT
chr1	223610086	223610087	chr1:223610087:A:G	rs74201723	A	G	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr1	223659793	223659794	chr1:223659794:T:C	rs1419308	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	223659805	223659806	chr1:223659806:C:G	rs60773808	C	G	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	223698207	223698208	chr1:223698208:C:G	rs6677286	C	G	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	224058051	224058052	chr1:224058052:C:T	rs7552832	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	224068072	224068073	chr1:224068073:G:A	rs1492690	G	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	224543377	224543378	chr1:224543378:C:T	rs144734364	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	224685016	224685017	chr1:224685017:G:T	rs118046200	G	T	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr1	224703337	224703338	chr1:224703338:C:T	rs10915699	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	224846319	224846320	chr1:224846320:C:T	rs34959085	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	226063680	226063681	chr1:226063681:C:A	rs34485485	C	A	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr1	226142480	226142481	chr1:226142481:C:T	rs56381945	C	T	C	Hoxd3_MA0912.1	12	1	+	9.15126682875895	7.944514908754085	TTAAGTTAATGACCTT
chr1	226408984	226408985	chr1:226408985:T:A	rs2793379	T	A	T	Hoxd3_MA0912.1	13	1	+	8.913950102325586	8.913950102325586	TTGTGGTAATGACTGC
chr1	226532455	226532456	chr1:226532456:A:T	rs697835	A	T	T	Hoxd3_MA0912.1	11	1	+	10.085800204000732	5.74810914290669	ATGTTTTAATTAATTT
chr1	226732206	226732207	chr1:226732207:C:T	rs10916030	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	226732208	226732209	chr1:226732209:A:C	rs10916031	A	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr1	227094831	227094832	chr1:227094832:A:C	chr1:227094832:A:C	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr1	227481980	227481981	chr1:227481981:T:A	rs1495850	T	A	a	Hoxd3_MA0912.1	1	1	-	7.811301939058344	9.037538153220284	AAGGAGTCATTACCTT
chr1	227776645	227776646	chr1:227776646:C:T	rs7553036	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	228080329	228080330	chr1:228080330:T:C	rs822735	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr1	228224835	228224836	chr1:228224836:G:A	rs16848404	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	228305399	228305400	chr1:228305400:G:C	rs201967683	G	C	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	228831332	228831333	chr1:228831333:C:A	rs546745387	C	A	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	228839420	228839421	chr1:228839421:C:G	chr1:228839421:C:G	C	G	C	Hoxd3_MA0912.1	10	1	-	8.01860976044125	3.21286888399134	CTGAGTTCATGACCAT
chr1	228884512	228884513	chr1:228884513:C:T	rs28754556	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr1	228929195	228929196	chr1:228929196:T:A	rs34655218	T	A	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr1	229033074	229033075	chr1:229033075:A:C	rs7517398	A	C	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	229088799	229088800	chr1:229088800:A:G	rs609041	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr1	229108949	229108950	chr1:229108950:T:A	rs79711963	T	A	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	229696413	229696414	chr1:229696414:C:T	rs12139794	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	229941298	229941299	chr1:229941299:A:G	rs7529116	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	230171435	230171436	chr1:230171436:T:C	rs4846922	T	C	T	Hoxd3_MA0912.1	13	1	+	8.774353059343264	9.378589787855638	TAGTGGTAATTACTGA
chr1	230174347	230174348	chr1:230174348:C:T	rs10158821	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	230268626	230268627	chr1:230268627:A:C	rs1041978757	A	C	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr1	230825622	230825623	chr1:230825623:A:G	rs722732	A	G	G	Hoxd3_MA0912.1	1	1	+	8.325969001256441	7.46814472788225	TAGGGGTAATTGAAGC
chr1	231871384	231871385	chr1:231871385:C:T	rs61836970	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	231971095	231971096	chr1:231971096:T:C	rs10864706	T	C	T	Hoxd3_MA0912.1	9	1	+	9.613292156739163	2.724719697173801	TTTAATTAATTAATGG
chr1	231971099	231971100	chr1:231971100:T:C	rs10864707	T	C	T	Hoxd3_MA0912.1	13	1	+	9.613292156739163	10.217528885251538	TTTAATTAATTAATGG
chr1	232012846	232012847	chr1:232012847:A:G	rs114596206	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr1	232854701	232854702	chr1:232854702:C:T	rs4649282	C	T	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr1	232869307	232869308	chr1:232869308:A:G	rs1021540814	A	G	A	Hoxd3_MA0912.1	1	1	-	9.018894785953343	6.934834298417212	TTGGGATAATTATTTC
chr1	233166265	233166266	chr1:233166266:A:G	rs77709339	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr1	233277650	233277651	chr1:233277651:A:G	rs116330189	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	233343317	233343318	chr1:233343318:T:C	rs7526011	T	C	T	Hoxd3_MA0912.1	9	1	+	9.005601226327473	2.11702876676211	ATAGAGTAATTACCAT
chr1	233393640	233393641	chr1:233393641:G:A	rs12061559	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr1	233604022	233604023	chr1:233604023:A:C	rs1693225	A	C	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	233632440	233632441	chr1:233632441:G:A	rs1764667	G	A	a	Hoxd3_MA0912.1	18	0	+	0	0	.
chr1	233843717	233843718	chr1:233843718:C:G	rs990764949	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr1	233843749	233843750	chr1:233843750:G:T	rs763415688	G	T	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	233945860	233945861	chr1:233945861:A:G	rs920136095	A	G	A	Hoxd3_MA0912.1	8	1	+	7.934631512686383	1.0460590531210199	GTGAGTCAATTAAACC
chr1	233991679	233991680	chr1:233991680:G:A	rs7515355	G	A	A	Hoxd3_MA0912.1	14	1	+	9.756694349055792	8.812729019291659	TTTAGCTAATTAGTGT
chr1	233998981	233998982	chr1:233998982:T:G	rs57614109	T	G	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	234258130	234258131	chr1:234258131:C:G	rs10797536	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr1	234295249	234295250	chr1:234295250:G:A	rs138796031	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	234295269	234295270	chr1:234295270:A:G	rs79537472	A	G	A	Hoxd3_MA0912.1	0	1	+	10.125981921376054	8.80553412605375	ATAGGGTAATTAAACT
chr1	234535218	234535219	chr1:234535219:T:C	rs271763	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr1	234559156	234559157	chr1:234559157:A:G	rs56376779	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr1	234581259	234581260	chr1:234581260:T:A	rs6702878	T	A	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	234671711	234671712	chr1:234671712:A:C	rs621167	A	C	A	Hoxd3_MA0912.1	7	1	+	9.713866706770037	7.739924340589522	CTGGTGTAATTAGAGC
chr1	234708514	234708515	chr1:234708515:C:T	rs112441777	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr1	234823355	234823356	chr1:234823356:C:T	rs58256916	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr1	234862656	234862657	chr1:234862657:T:C	rs7541483	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr1	235020509	235020510	chr1:235020510:G:A	rs28679445	G	A	g	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr1	235131115	235131116	chr1:235131116:G:T	rs561079550	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	235246708	235246709	chr1:235246709:G:A	rs2297803	G	A	G	Hoxd3_MA0912.1	14	1	+	8.527021514796617	7.5830561850324845	ATGAGCTCATTACTGG
chr1	235253522	235253523	chr1:235253523:T:G	rs571005382	T	G	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr1	235290921	235290922	chr1:235290922:C:T	rs2382616	C	T	t	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	235351139	235351140	chr1:235351140:T:G	rs1806603	T	G	a	Hoxd3_MA0912.1	18	0	-	0	0	.
chr1	235408112	235408113	chr1:235408113:G:A	rs3856245	G	A	A	Hoxd3_MA0912.1	5	1	+	7.513494624102911	6.788931247309588	CTGTGGTAATGGACAT
chr1	235417411	235417412	chr1:235417412:A:G	rs2172718	A	G	g	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	235502462	235502463	chr1:235502463:C:T	rs291347	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr1	235558527	235558528	chr1:235558528:G:A	rs291352	G	A	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	235910161	235910162	chr1:235910162:A:G	rs12073871	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr1	236151285	236151286	chr1:236151286:C:T	rs9661110	C	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr1	236280733	236280734	chr1:236280734:G:C	rs17566480	G	C	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	236391127	236391128	chr1:236391128:A:T	rs112946848	A	T	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr1	236391134	236391135	chr1:236391135:T:C	rs1889069	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	236404466	236404467	chr1:236404467:C:T	rs593981	C	T	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	236428226	236428227	chr1:236428227:G:A	rs2996457	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr1	236428248	236428249	chr1:236428249:A:C	rs2990592	A	C	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	236471964	236471965	chr1:236471965:A:C	rs1389470364	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr1	236716681	236716682	chr1:236716682:G:A	rs1613395	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	237172123	237172124	chr1:237172124:T:G	rs1008956	T	G	T	Hoxd3_MA0912.1	7	1	-	9.872432081545014	7.898489715364495	ATGATTTAATTACATC
chr1	237299788	237299789	chr1:237299789:T:A	rs10754598	T	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	237304048	237304049	chr1:237304049:C:T	rs148686975	C	T	c	Hoxd3_MA0912.1	32	0	-	0	0	.
chr1	237613519	237613520	chr1:237613520:A:G	rs10733119	A	G	g	Hoxd3_MA0912.1	30	0	-	0	0	.
chr1	237647737	237647738	chr1:237647738:T:C	rs140515301	T	C	T	Hoxd3_MA0912.1	15	1	+	8.991277300217677	8.213572731629668	TTGGCGTAATTATCAT
chr1	237796471	237796472	chr1:237796472:A:G	rs1796909	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr1	237941327	237941328	chr1:237941328:A:G	rs114783979	A	G	A	Hoxd3_MA0912.1	11	1	+	9.216717885522831	7.430791937341839	TTAGCTTAATTAAAGT
chr1	238497693	238497694	chr1:238497694:T:C	rs117379094	T	C	t	Hoxd3_MA0912.1	8	1	-	8.014337531236237	1.1257650716708756	CAGGTTTAATTGACTC
chr1	238599797	238599798	chr1:238599798:T:C	rs535914	T	C	C	Hoxd3_MA0912.1	11	1	-	8.236976712425719	6.451050764244725	CTGATCCAATTAAGTT
chr1	238746336	238746337	chr1:238746337:T:C	rs2049317	T	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr1	238951928	238951929	chr1:238951929:T:A	chr1:238951929:T:A	T	A	T	Hoxd3_MA0912.1	15	1	+	7.817064690082926	6.152056926494015	CTACTGTAATTGCCCT
chr1	238952457	238952458	chr1:238952458:T:C	rs13374113	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr1	239233763	239233764	chr1:239233764:A:T	rs10925854	A	T	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr1	239233803	239233804	chr1:239233804:C:T	rs1339738	C	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr1	239674422	239674423	chr1:239674423:T:A	rs141348179	T	A	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	239792269	239792270	chr1:239792270:C:T	rs74408845	C	T	C	Hoxd3_MA0912.1	3	1	-	6.875216055305871	6.989313806344895	CTGGTGCAATGACAGG
chr1	239812108	239812109	chr1:239812109:A:C	rs543540	A	C	A	Hoxd3_MA0912.1	3	1	+	7.6301956649896105	6.329177996277646	CTCAGCTCATTACACC
chr1	239930777	239930778	chr1:239930778:A:G	rs10926017	A	G	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr1	240134801	240134802	chr1:240134802:C:T	rs117582153	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr1	240134813	240134814	chr1:240134814:A:T	rs574794383	A	T	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	240498212	240498213	chr1:240498213:G:A	rs12567336	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr1	241741826	241741827	chr1:241741827:G:A	rs6671725	G	A	G	Hoxd3_MA0912.1	15	1	-	8.892377533949798	9.670082102537807	CTGGCTTAATTAAAAC
chr1	242208477	242208478	chr1:242208478:C:T	rs114471561	C	T	C	Hoxd3_MA0912.1	0	1	+	8.08028260072225	8.13278809810018	CTCAGGTAATGACCAT
chr1	242240495	242240496	chr1:242240496:A:G	rs409941	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	242240497	242240498	chr1:242240498:T:A	rs402159	T	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr1	242429831	242429832	chr1:242429832:T:C	rs2580230	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	243232816	243232817	chr1:243232817:C:T	rs6669104	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr1	243336441	243336442	chr1:243336442:C:G	rs2783968	C	G	G	Hoxd3_MA0912.1	14	1	-	8.761342500837829	8.937757866122277	ATGAGCCAATTAAAGC
chr1	243336455	243336456	chr1:243336456:T:C	rs2783967	T	C	C	Hoxd3_MA0912.1	0	1	-	8.761342500837829	7.440894705515527	ATGAGCCAATTAAAGC
chr1	243463832	243463833	chr1:243463833:G:A	rs67312095	G	A	G	Hoxd3_MA0912.1	1	1	-	7.3292877781356065	9.413348265671738	ACGGTCTCATTACCCT
chr1	243477578	243477579	chr1:243477579:A:G	rs12748751	A	G	A	Hoxd3_MA0912.1	3	1	+	9.153154855109152	9.039057104070128	CAGATCTAATTGCCCT
chr1	243514069	243514070	chr1:243514070:G:A	rs3006938	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr1	244211639	244211640	chr1:244211640:C:T	rs11810106	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr1	244309316	244309317	chr1:244309317:G:A	rs76058475	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	244450353	244450354	chr1:244450354:G:C	rs55897343	G	C	G	Hoxd3_MA0912.1	15	1	-	7.788837883216758	7.742533315175072	TTGCACTAATTGCCTC
chr1	244751407	244751408	chr1:244751408:C:A	rs78735428	C	A	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	244893471	244893472	chr1:244893472:T:C	rs74155504	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr1	244893510	244893511	chr1:244893511:A:G	rs75575377	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr1	244952995	244952996	chr1:244952996:A:G	rs7522091	A	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr1	245032314	245032315	chr1:245032315:T:C	rs630432	T	C	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr1	245092769	245092770	chr1:245092770:C:T	rs149817434	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	245148992	245148993	chr1:245148993:G:A	rs4658439	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr1	245185525	245185526	chr1:245185526:A:G	rs10924112	A	G	G	Hoxd3_MA0912.1	1	1	-	9.364188797418853	7.280128309882725	TTGGGGTAATGACAGC
chr1	245201172	245201173	chr1:245201173:C:T	rs112742434	C	T	T	Hoxd3_MA0912.1	12	1	+	7.701448156248031	6.494696236243167	CTGGGTTAAATACAGT
chr1	245428988	245428989	chr1:245428989:T:C	rs1687100	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	245513818	245513819	chr1:245513819:G:A	rs10924220	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr1	245554831	245554832	chr1:245554832:G:A	rs1771499	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr1	245583975	245583976	chr1:245583976:T:C	rs879223	T	C	T	Hoxd3_MA0912.1	10	1	+	7.299539347507368	0.5198561048769403	CTGGGGAAATTATCCT
chr1	245585482	245585483	chr1:245585483:G:A	rs34098108	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr1	245826717	245826718	chr1:245826718:G:A	rs6693414	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr1	246001730	246001731	chr1:246001731:T:C	rs111447659	T	C	T	Hoxd3_MA0912.1	15	1	+	7.8578778000828216	7.080173231494813	CAGGGGTCATTGCCCT
chr1	246068092	246068093	chr1:246068093:C:A	rs10924482	C	A	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr1	246110659	246110660	chr1:246110660:T:G	rs7541394	T	G	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr1	246263379	246263380	chr1:246263380:C:T	rs193234903	C	T	C	Hoxd3_MA0912.1	7	1	+	7.5633930802826335	2.7576522038327242	TAGGGCTCATTAACAG
chr1	246417380	246417381	chr1:246417381:G:C	rs7527781	G	C	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr1	246731103	246731104	chr1:246731104:G:A	rs547757638	G	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr1	246748821	246748822	chr1:246748822:A:G	rs6671220	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr1	247177891	247177892	chr1:247177892:C:T	rs4344362	C	T	c	Hoxd3_MA0912.1	23	0	-	0	0	.
chr1	247337518	247337519	chr1:247337519:A:G	rs77438414	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr1	247421288	247421289	chr1:247421289:A:G	rs12048215	A	G	A	Hoxd3_MA0912.1	8	1	+	7.630011515242806	0.7414390556774438	TGGGTGTAATGACACT
chr1	247421295	247421296	chr1:247421296:T:G	rs12044934	T	G	T	Hoxd3_MA0912.1	15	1	+	7.630011515242806	6.806002378613111	TGGGTGTAATGACACT
chr1	247440281	247440282	chr1:247440282:C:T	rs79348670	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr1	248433759	248433760	chr1:248433760:A:G	rs796160231	A	G	.	Hoxd3_MA0912.1	9	1	-	7.785600971024462	0.8970285114590988	TTGGCCTAATTGCTGC
chr1	248783949	248783950	chr1:248783950:A:G	rs11205402	A	G	N	Hoxd3_MA0912.1	4	1	-	6.921520623347559	5.9476794411468505	CTGGTGTCATTGCTGC
chr10	124671	124672	chr10:124672:A:C	rs10794721	A	C	A	Hoxd3_MA0912.1	12	1	+	9.019061160487857	9.019061160487857	TTGGAATAATTAATAG
chr10	129712	129713	chr10:129713:C:T	rs4880781	C	T	C	Hoxd3_MA0912.1	2	1	-	7.521285919676934	6.071450875519895	TGGGGATAATTGCTGT
chr10	306484	306485	chr10:306485:C:T	rs1250506125	C	T	C	Hoxd3_MA0912.1	3	1	-	8.999579485645935	9.113677236684959	ATCGTCTAATTACTCT
chr10	538919	538920	chr10:538920:C:T	rs141076749	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	607977	607978	chr10:607978:C:T	rs942320157	C	T	C	Hoxd3_MA0912.1	13	1	-	8.69261056349935	9.666451745700058	TTGGTTTCATTACGGT
chr10	608006	608007	chr10:608007:G:C	rs1251337	G	C	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	782016	782017	chr10:782017:C:T	rs11253440	C	T	c	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr10	984545	984546	chr10:984546:T:C	rs55990142	T	C	T	Hoxd3_MA0912.1	7	1	-	9.666938487519358	2.887255244888931	CTGTGCTAATGAACTT
chr10	1095161	1095162	chr10:1095162:A:G	rs10903367	A	G	g	Hoxd3_MA0912.1	12	1	+	9.199828383855392	8.232306152916362	ATGAGGTAATGAACAT
chr10	1201022	1201023	chr10:1201023:G:A	rs4880488	G	A	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	1257209	1257210	chr10:1257210:G:A	rs1027943841	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	1336946	1336947	chr10:1336947:T:C	rs4880825	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	1553177	1553178	chr10:1553178:G:A	rs4528239	G	A	A	Hoxd3_MA0912.1	13	1	-	9.287635432466834	8.68339870395446	TTTTGGTAATTAACGA
chr10	1553190	1553191	chr10:1553191:A:T	rs4631810	A	T	T	Hoxd3_MA0912.1	0	1	-	9.287635432466834	8.571201300528097	TTTTGGTAATTAACGA
chr10	1587796	1587797	chr10:1587797:G:A	rs72764992	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	1649897	1649898	chr10:1649898:G:A	rs7895908	G	A	g	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	1943320	1943321	chr10:1943321:T:G	rs11250944	T	G	T	Hoxd3_MA0912.1	12	1	-	9.988236882103374	9.988236882103374	AAGAATTAATTAAACT
chr10	2520599	2520600	chr10:2520600:C:T	rs1472136	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	2520606	2520607	chr10:2520607:T:C	rs1472137	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	2520643	2520644	chr10:2520644:C:T	rs1472138	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	2520644	2520645	chr10:2520645:G:T	rs9665559	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	2839636	2839637	chr10:2839637:G:A	rs11251536	G	A	G	Hoxd3_MA0912.1	10	1	+	7.720149914260578	2.9144090378106697	TTGTGCCAATGACCCC
chr10	2962381	2962382	chr10:2962382:T:A	chr10:2962382:T:A	T	A	T	Hoxd3_MA0912.1	9	1	+	8.877457651151396	4.386780464384403	CTGGTGTAATGAACTG
chr10	2985158	2985159	chr10:2985159:C:T	rs17159399	C	T	c	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	3108121	3108122	chr10:3108122:C:T	rs17212803	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr10	3136793	3136794	chr10:3136794:T:C	rs3816712	T	C	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr10	3136794	3136795	chr10:3136795:G:A	rs2388564	G	A	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	3198863	3198864	chr10:3198864:A:C	rs149700965	A	C	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	3213820	3213821	chr10:3213821:C:A	rs10903987	C	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr10	3213821	3213822	chr10:3213822:G:A	rs61829310	G	A	G	Hoxd3_MA0912.1	15	1	-	6.461262187681804	7.238966756269813	CTGGGTCCATGACCCC
chr10	3264495	3264496	chr10:3264496:T:A	rs4881133	T	A	A	Hoxd3_MA0912.1	8	1	-	8.963802890380544	4.473125703613551	CTGTTTCAATTACATT
chr10	3324338	3324339	chr10:3324339:A:G	rs36035519	A	G	A	Hoxd3_MA0912.1	4	1	-	10.401014893646503	9.427173711445795	ATGATATAATTACCTT
chr10	3424996	3424997	chr10:3424997:C:T	rs945797	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	3451304	3451305	chr10:3451305:T:C	rs73586720	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	3468165	3468166	chr10:3468166:A:T	rs117343184	A	T	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	3476687	3476688	chr10:3476688:G:A	rs11251910	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr10	3476700	3476701	chr10:3476701:T:G	rs1543836	T	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	3484854	3484855	chr10:3484855:G:A	rs11251915	G	A	G	Hoxd3_MA0912.1	15	1	+	9.561989364380192	8.720990737420976	TTGGGATAATTGCCCG
chr10	3727534	3727535	chr10:3727535:A:G	rs7094467	A	G	G	Hoxd3_MA0912.1	1	1	-	9.70156301848285	7.617502530946718	TTGAATTAATTACTTA
chr10	3768577	3768578	chr10:3768578:G:A	rs11252079	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	3924504	3924505	chr10:3924505:A:T	rs7901720	A	T	A	Hoxd3_MA0912.1	0	1	+	10.609434303903619	11.325868435842356	ATGTGGTAATTAACAT
chr10	4024358	4024359	chr10:4024359:C:T	rs11252280	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr10	4054107	4054108	chr10:4054108:T:C	rs2765665	T	C	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr10	4351863	4351864	chr10:4351864:C:T	rs2209686	C	T	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	4372825	4372826	chr10:4372826:C:T	rs74570985	C	T	C	Hoxd3_MA0912.1	14	1	-	9.081302607332178	8.137337277568045	TTGTTCTAATTAGAGG
chr10	4556796	4556797	chr10:4556797:A:G	rs48794	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	4712837	4712838	chr10:4712838:G:A	rs6601857	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	4767161	4767162	chr10:4767162:G:T	rs115348430	G	T	g	Hoxd3_MA0912.1	15	1	-	8.94174898704875	8.054445792047849	CTTTGCTAATTAATTC
chr10	4767186	4767187	chr10:4767187:A:G	rs114958962	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr10	4770961	4770962	chr10:4770962:A:G	rs11818567	A	G	A	Hoxd3_MA0912.1	14	1	+	8.407065321662179	9.351030651426312	ATGAGCTCATTACTAT
chr10	5079840	5079841	chr10:5079841:A:G	rs11252924	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	5094010	5094011	chr10:5094011:C:T	rs10904415	C	T	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	5551181	5551182	chr10:5551182:C:T	rs550622724	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	5555054	5555055	chr10:5555055:C:T	rs78011915	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	5645079	5645080	chr10:5645080:A:G	rs11256695	A	G	a	Hoxd3_MA0912.1	1	1	-	8.187593964220643	6.103533476684513	TTTTGGTAATGAGCCT
chr10	5646323	5646324	chr10:5646324:A:G	rs10905799	A	G	N	Hoxd3_MA0912.1	6	1	-	10.210934206871254	8.425008258690262	TAGAACTAATTACTGT
chr10	5822536	5822537	chr10:5822537:C:A	rs10508296	C	A	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	5858858	5858859	chr10:5858859:A:G	rs907688	A	G	A	Hoxd3_MA0912.1	8	1	+	8.789937111692433	1.9013646521270717	CTGGTTTCATTAATGG
chr10	5861540	5861541	chr10:5861541:C:T	rs7084904	C	T	C	Hoxd3_MA0912.1	2	1	-	8.071629965604696	6.621794921447657	TTGTAGCAATTATCCC
chr10	5861554	5861555	chr10:5861555:G:T	rs7071536	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	5927125	5927126	chr10:5927126:G:A	rs149785965	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	6052297	6052298	chr10:6052298:G:A	rs78633484	G	A	G	Hoxd3_MA0912.1	5	1	+	8.523423053215234	7.798859676421911	CAGGGGTAATGAACAT
chr10	6053872	6053873	chr10:6053873:A:G	rs12722498	A	G	A	Hoxd3_MA0912.1	9	1	-	7.0961347442805085	0.20756228471514532	CTGGTGCAATTGGACT
chr10	6300892	6300893	chr10:6300893:A:G	rs17297184	A	G	A	Hoxd3_MA0912.1	2	1	-	7.864653360806315	7.398369512663113	CCTGCGTAATTACCCT
chr10	6448486	6448487	chr10:6448487:C:A	rs34851049	C	A	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	6600264	6600265	chr10:6600265:C:T	rs72783741	C	T	C	Hoxd3_MA0912.1	0	1	-	7.280492386434817	8.60094018175712	GTGGGCTAATTGCTGG
chr10	6788999	6789000	chr10:6789000:A:G	rs10904966	A	G	A	Hoxd3_MA0912.1	0	1	+	7.45498658188971	6.134538786567404	AGGATCTAATTGCCGT
chr10	6875163	6875164	chr10:6875164:G:T	rs3032541	G	T	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	6964264	6964265	chr10:6964265:G:T	rs7897660	G	T	g	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	7411190	7411191	chr10:7411191:C:T	chr10:7411191:C:T	C	T	C	Hoxd3_MA0912.1	14	1	+	8.618776020065328	8.054439573933037	TTAAGCCAATTAGCCT
chr10	7411193	7411194	chr10:7411194:C:A	rs577214468	C	A	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	7489174	7489175	chr10:7489175:G:A	rs112148440	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	7561913	7561914	chr10:7561914:C:G	rs2050354	C	G	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr10	7561945	7561946	chr10:7561946:T:C	rs2050355	T	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	7733341	7733342	chr10:7733342:T:C	rs7901580	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	8035272	8035273	chr10:8035273:C:G	rs115124036	C	G	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	8052182	8052183	chr10:8052183:A:G	rs556960	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	8205956	8205957	chr10:8205957:T:C	rs61834015	T	C	T	Hoxd3_MA0912.1	9	1	+	7.841112256958281	0.9525397973929195	CTGTGCTAATGGCTCT
chr10	8268374	8268375	chr10:8268375:A:G	rs11255610	A	G	A	Hoxd3_MA0912.1	1	1	-	8.297602405416823	6.213541917880694	TTGATCTAATGACATC
chr10	8326473	8326474	chr10:8326474:A:T	rs7098353	A	T	A	Hoxd3_MA0912.1	14	1	+	8.972095087596545	9.528139336512835	CTGATTTAATTGCTAT
chr10	8383848	8383849	chr10:8383849:A:G	rs2260172	A	G	G	Hoxd3_MA0912.1	15	1	-	9.576331816108919	8.79862724752091	CTGAGTCAATTAAAAT
chr10	8418927	8418928	chr10:8418928:T:A	rs7088182	T	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	8499542	8499543	chr10:8499543:G:C	rs4994719	G	C	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	8572385	8572386	chr10:8572386:A:G	rs1325879	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	8918379	8918380	chr10:8918380:C:T	rs290916	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	9112073	9112074	chr10:9112074:A:G	rs372712	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	9175610	9175611	chr10:9175611:C:T	rs1149954	C	T	T	Hoxd3_MA0912.1	12	1	+	8.94971936725293	7.742967447248066	ATTGGCTAATTACAAT
chr10	9270191	9270192	chr10:9270192:A:G	rs7914432	A	G	G	Hoxd3_MA0912.1	6	1	-	9.13487839710448	7.348952448923487	AAGAAATAATTACACT
chr10	9331739	9331740	chr10:9331740:A:C	rs984518398	A	C	A	Hoxd3_MA0912.1	15	1	-	8.730703667690353	7.9066945310606584	ATAGGCTAATTATACT
chr10	9331763	9331764	chr10:9331764:T:C	rs118094999	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr10	9362856	9362857	chr10:9362857:C:A	rs73577022	C	A	C	Hoxd3_MA0912.1	7	1	+	9.65533760815908	11.6292799743396	CTGAAATCATTACCCT
chr10	9762845	9762846	chr10:9762846:T:C	rs878300	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	9824767	9824768	chr10:9824768:A:G	rs7913128	A	G	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr10	10514952	10514953	chr10:10514953:A:T	rs11256641	A	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	10564259	10564260	chr10:10564260:C:T	rs77542540	C	T	C	Hoxd3_MA0912.1	4	1	-	8.803261265081689	8.199024536569313	TTGCGGTAATTGCCAT
chr10	10576983	10576984	chr10:10576984:A:G	rs11256681	A	G	A	Hoxd3_MA0912.1	1	1	-	7.450037440547934	5.365976953011804	CTGAGGTAATGGGAGT
chr10	10597778	10597779	chr10:10597779:T:C	rs1410241	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	11019326	11019327	chr10:11019327:A:G	rs56363627	A	G	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	11150905	11150906	chr10:11150906:G:A	rs17449567	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	11256388	11256389	chr10:11256389:C:T	rs2653514	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	11347829	11347830	chr10:11347830:C:T	rs1285580564	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	11387743	11387744	chr10:11387744:A:T	rs59636797	A	T	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	11439180	11439181	chr10:11439181:C:T	rs2454779	C	T	C	Hoxd3_MA0912.1	14	1	-	7.896920752198148	6.952955422434015	CAGGTCTCATTAACGC
chr10	11598875	11598876	chr10:11598876:C:G	rs923756	C	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	11640457	11640458	chr10:11640458:G:A	rs7100262	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	11640493	11640494	chr10:11640494:C:G	chr10:11640494:C:G	C	G	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr10	11705915	11705916	chr10:11705916:A:G	rs58453382	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr10	11913419	11913420	chr10:11913420:C:A	rs115292195	C	A	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	11916164	11916165	chr10:11916165:G:A	rs139592564	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	12165508	12165509	chr10:12165509:A:G	rs11972	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr10	12481484	12481485	chr10:12481485:T:C	rs12764039	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	12704310	12704311	chr10:12704311:A:G	rs76442899	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	13117898	13117899	chr10:13117899:C:G	rs545734	C	G	G	Hoxd3_MA0912.1	14	1	-	8.241309711075246	8.417725076359693	TTATGCCAATTACTGT
chr10	13299730	13299731	chr10:13299731:A:G	rs732701	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	13525926	13525927	chr10:13525927:A:C	rs4750375	A	C	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	13650680	13650681	chr10:13650681:G:C	rs12264819	G	C	C	Hoxd3_MA0912.1	11	1	+	7.1762056773491825	2.2174954561178466	CTGTCCTAATTGCCCA
chr10	13663675	13663676	chr10:13663676:C:T	rs2274353	C	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	13663680	13663681	chr10:13663681:T:C	rs2274354	T	C	C	Hoxd3_MA0912.1	15	1	-	7.344677668014036	8.185676294973252	CTGAGCCAATGACCCA
chr10	13683687	13683688	chr10:13683688:G:C	rs2399988	G	C	C	Hoxd3_MA0912.1	14	1	+	8.602387271674147	8.778802636958593	ACTGGGTAATTAACGT
chr10	13740604	13740605	chr10:13740605:G:A	rs6602679	G	A	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	13787674	13787675	chr10:13787675:T:C	rs77538814	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	13832091	13832092	chr10:13832092:G:T	rs7905831	G	T	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	13832100	13832101	chr10:13832101:T:C	rs12241162	T	C	T	Hoxd3_MA0912.1	8	1	-	8.18457515981162	1.2960027002462589	CTGGTGTAATTGATCA
chr10	13864855	13864856	chr10:13864856:T:C	rs10906521	T	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr10	13945445	13945446	chr10:13945446:T:A	rs767227914	T	A	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	14404244	14404245	chr10:14404245:T:A	rs666482	T	A	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr10	14591374	14591375	chr10:14591375:G:A	rs11259209	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr10	14648165	14648166	chr10:14648166:C:G	rs563839325	C	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr10	14751567	14751568	chr10:14751568:T:C	rs992060696	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr10	15201122	15201123	chr10:15201123:T:A	rs78407090	T	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	15452370	15452371	chr10:15452371:A:G	rs78715335	A	G	A	Hoxd3_MA0912.1	5	1	-	9.299382964378392	8.982061522491984	TTAAGTCAATTACTCT
chr10	15483196	15483197	chr10:15483197:T:G	rs4750653	T	G	G	Hoxd3_MA0912.1	9	1	+	8.941238157022644	4.450560970255651	TTTAGCTAATTGCCCC
chr10	16026563	16026564	chr10:16026564:G:A	rs10904665	G	A	G	Hoxd3_MA0912.1	0	1	-	10.346543053754798	10.39904855113273	CTGAATTAATTAGTTT
chr10	16156010	16156011	chr10:16156011:G:T	rs11253826	G	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr10	16563212	16563213	chr10:16563213:C:G	rs11254078	C	G	G	Hoxd3_MA0912.1	14	1	-	8.658131153403925	8.834546518688372	ATTTGGTAATTAAGGT
chr10	16663534	16663535	chr10:16663535:C:G	rs780363209	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	16700870	16700871	chr10:16700871:T:C	rs10904794	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	16895070	16895071	chr10:16895071:A:C	rs11254268	A	C	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	16905030	16905031	chr10:16905031:G:A	rs74116760	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	16996125	16996126	chr10:16996126:C:T	rs779976362	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	16996138	16996139	chr10:16996139:G:A	rs1276709	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr10	17101653	17101654	chr10:17101654:C:T	rs76716372	C	T	C	Hoxd3_MA0912.1	0	1	+	8.662079177722575	8.714584675100506	CCTGGGTAATTAATGT
chr10	17267904	17267905	chr10:17267905:C:T	rs10904913	C	T	C	Hoxd3_MA0912.1	4	1	-	8.96393622250633	8.359699493993956	CTAAGCTAATTACGCC
chr10	17277707	17277708	chr10:17277708:C:T	rs359280	C	T	c	Hoxd3_MA0912.1	33	0	+	0	0	.
chr10	17345327	17345328	chr10:17345328:A:G	rs7100628	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	17348325	17348326	chr10:17348326:G:A	rs11813718	G	A	G	Hoxd3_MA0912.1	14	1	-	10.023006605370545	9.458670159238254	TTGGTGTAATTACACA
chr10	17473909	17473910	chr10:17473910:G:C	rs61842080	G	C	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	17498410	17498411	chr10:17498411:A:C	rs1753370	A	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr10	17531730	17531731	chr10:17531731:C:T	rs78052363	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	17537441	17537442	chr10:17537442:A:C	rs10752086	A	C	A	Hoxd3_MA0912.1	10	1	-	9.851521358983959	7.87757899280344	CTGATGTAATTACAAC
chr10	17643727	17643728	chr10:17643728:A:G	rs2243617	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	17643736	17643737	chr10:17643737:C:G	rs114325814	C	G	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	17643739	17643740	chr10:17643740:C:A	rs144619071	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	17822020	17822021	chr10:17822021:A:G	rs945289562	A	G	a	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	17847466	17847467	chr10:17847467:A:G	rs370752032	A	G	A	Hoxd3_MA0912.1	4	1	+	8.583609693601712	9.187846422114086	CTGGATTAATGATTCT
chr10	17990918	17990919	chr10:17990919:C:G	rs35540736	C	G	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	18002358	18002359	chr10:18002359:G:A	rs7894090	G	A	A	Hoxd3_MA0912.1	14	1	+	9.900861534948094	8.956896205183961	CTGGGCTCATTAAAGT
chr10	18010590	18010591	chr10:18010591:A:G	rs7893618	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr10	18071574	18071575	chr10:18071575:C:G	rs2497810	C	G	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr10	18136488	18136489	chr10:18136489:A:G	rs11012783	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr10	18136512	18136513	chr10:18136513:A:G	rs12770520	A	G	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	18362980	18362981	chr10:18362981:C:G	rs6482356	C	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	18523506	18523507	chr10:18523507:A:G	rs10828835	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	19017507	19017508	chr10:19017508:C:A	rs72785219	C	A	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr10	19017552	19017553	chr10:19017553:A:G	rs12782198	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	19203772	19203773	chr10:19203773:C:T	rs16918344	C	T	C	Hoxd3_MA0912.1	6	1	+	8.048239438964313	9.834165387145307	TTGAAGCAATTAGTGG
chr10	19208846	19208847	chr10:19208847:G:A	rs2884433	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	19480580	19480581	chr10:19480581:A:G	rs10764037	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr10	20180618	20180619	chr10:20180619:C:T	rs139626072	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	20682913	20682914	chr10:20682914:C:A	rs112381683	C	A	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr10	20741345	20741346	chr10:20741346:G:A	rs114971157	G	A	G	Hoxd3_MA0912.1	13	1	-	8.561947753670824	7.95771102515845	ATGATGCAATTACCTC
chr10	20990368	20990369	chr10:20990369:G:A	rs58569619	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	21194738	21194739	chr10:21194739:A:G	rs78953370	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	21798144	21798145	chr10:21798145:C:T	rs531764142	C	T	C	Hoxd3_MA0912.1	5	1	+	9.485375150835036	9.802696592721444	CATTGCTAATTAACGT
chr10	21975628	21975629	chr10:21975629:C:T	rs2807972	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	21988964	21988965	chr10:21988965:C:G	rs4748778	C	G	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	22217920	22217921	chr10:22217921:T:C	rs1170495	T	C	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	22610111	22610112	chr10:22610112:C:T	rs2559528	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	22646010	22646011	chr10:22646011:T:C	rs1750778	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr10	22774186	22774187	chr10:22774187:A:G	chr10:22774187:A:G	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	23545989	23545990	chr10:23545990:G:A	rs10828477	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	23616903	23616904	chr10:23616904:C:T	rs1415422	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	24763800	24763801	chr10:24763801:A:G	rs6482440	A	G	G	Hoxd3_MA0912.1	1	1	-	7.681395241978562	5.59733475444243	CTGAGATCATGACACT
chr10	24834252	24834253	chr10:24834253:C:G	rs4747503	C	G	C	Hoxd3_MA0912.1	10	1	-	7.389443861634155	2.583702985184247	CTAGGGTAATGATCCG
chr10	24859627	24859628	chr10:24859628:G:A	rs10828712	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	24928691	24928692	chr10:24928692:T:A	rs112526177	T	A	T	Hoxd3_MA0912.1	0	1	-	8.81725582942165	9.533689961360388	ATGGGCCAATTACCTG
chr10	24935788	24935789	chr10:24935789:A:G	rs11014307	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	24935809	24935810	chr10:24935810:T:C	rs11014308	T	C	T	Hoxd3_MA0912.1	4	1	-	8.670495771235458	9.27473249974783	TTGCATCAATTACCCC
chr10	24935825	24935826	chr10:24935826:C:A	rs11014309	C	A	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	24951817	24951818	chr10:24951818:A:C	rs920575880	A	C	A	Hoxd3_MA0912.1	7	1	+	7.226998714817274	5.253056348636754	CAGGGTTAATGAGGCT
chr10	24958020	24958021	chr10:24958021:A:G	rs274306	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	24963275	24963276	chr10:24963276:G:T	rs274289	G	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	25007655	25007656	chr10:25007656:G:A	rs113265117	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	25007660	25007661	chr10:25007661:C:G	rs113593878	C	G	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr10	25468406	25468407	chr10:25468407:G:T	rs112658067	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr10	25618199	25618200	chr10:25618200:G:A	rs7901679	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	25690861	25690862	chr10:25690862:C:T	rs7914182	C	T	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	25898747	25898748	chr10:25898748:T:G	rs7086207	T	G	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	26218843	26218844	chr10:26218844:A:G	rs7089304	A	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	26257831	26257832	chr10:26257832:G:A	rs57533435	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr10	26257832	26257833	chr10:26257833:C:T	rs57645065	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr10	26309953	26309954	chr10:26309954:G:A	rs60698538	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	26534535	26534536	chr10:26534536:A:G	rs76542885	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	26700770	26700771	chr10:26700771:G:A	rs1613801	G	A	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr10	26766966	26766967	chr10:26766967:T:C	rs6482574	T	C	T	Hoxd3_MA0912.1	8	1	-	8.298672910850645	1.410100451285282	CTGATGCAATTACTCA
chr10	26806042	26806043	chr10:26806043:G:C	rs899372	G	C	G	Hoxd3_MA0912.1	0	1	-	8.02963859063912	6.045262160756012	CTGAGGTAATGGCATT
chr10	27330560	27330561	chr10:27330561:G:A	rs237593	G	A	.	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	27602212	27602213	chr10:27602213:C:G	rs10741137	C	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	27893567	27893568	chr10:27893568:G:A	rs12358283	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr10	28302413	28302414	chr10:28302414:G:A	rs60648801	G	A	G	Hoxd3_MA0912.1	1	1	-	8.498401440286017	10.582461927822148	TCGTGTTAATTACATG
chr10	28396458	28396459	chr10:28396459:A:G	rs12265184	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr10	28838595	28838596	chr10:28838596:A:G	rs7078297	A	G	G	Hoxd3_MA0912.1	1	1	-	10.326272086778584	8.242211599242452	TTAGGGTAATTACCAT
chr10	28949598	28949599	chr10:28949599:G:T	rs7895806	G	T	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr10	29110370	29110371	chr10:29110371:A:G	rs562930	A	G	A	Hoxd3_MA0912.1	3	1	-	10.260827468153893	9.52414624557422	CTGTGCTAATTAACAG
chr10	29478137	29478138	chr10:29478138:T:G	rs77279442	T	G	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	29480163	29480164	chr10:29480164:G:C	rs3952847	G	C	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	29480194	29480195	chr10:29480195:A:G	rs113040321	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	29783277	29783278	chr10:29783278:G:A	rs11007741	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	29933244	29933245	chr10:29933245:T:C	rs7068958	T	C	T	Hoxd3_MA0912.1	0	1	+	8.055913720683238	8.003408223305309	TAGAGGTCATTAAGGT
chr10	30002524	30002525	chr10:30002525:T:C	rs77394171	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr10	30002557	30002558	chr10:30002558:C:T	rs115334644	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	30208678	30208679	chr10:30208679:T:A	rs558534	T	A	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	30470678	30470679	chr10:30470679:C:T	rs7096279	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr10	30554543	30554544	chr10:30554544:T:C	rs2292193	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr10	30565601	30565602	chr10:30565602:C:T	rs9804207	C	T	T	Hoxd3_MA0912.1	15	1	+	8.067154357452848	8.844858926040857	CAGAGCTAATTAAGAC
chr10	30565608	30565609	chr10:30565609:A:G	rs7477975	A	G	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	30573661	30573662	chr10:30573662:T:C	rs6481706	T	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr10	30591396	30591397	chr10:30591397:A:T	rs4749570	A	T	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr10	30591398	30591399	chr10:30591399:A:G	rs3123280	A	G	A	Hoxd3_MA0912.1	1	1	+	8.567849528546226	7.710025255172036	CAGGAGTAATTACAGA
chr10	30663338	30663339	chr10:30663339:C:T	rs1494131	C	T	-	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	30714307	30714308	chr10:30714308:A:G	rs11008199	A	G	g	Hoxd3_MA0912.1	14	1	-	9.729103442823252	10.293439888955543	TTGTGATAATTAAATG
chr10	30785158	30785159	chr10:30785159:A:G	rs77803190	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	30785188	30785189	chr10:30785189:G:A	rs916975032	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	30813634	30813635	chr10:30813635:C:T	rs7093320	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	30824094	30824095	chr10:30824095:C:T	rs34815967	C	T	c	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	30824132	30824133	chr10:30824133:G:C	rs11008279	G	C	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	30862764	30862765	chr10:30862765:G:T	rs7079764	G	T	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	32171121	32171122	chr10:32171122:T:G	rs2998035	T	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	32171140	32171141	chr10:32171141:C:T	rs3006679	C	T	C	Hoxd3_MA0912.1	13	1	+	7.497780059175355	6.893543330662981	CTTTGTTAATTGGCGC
chr10	32362589	32362590	chr10:32362590:C:T	rs114810473	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	32380308	32380309	chr10:32380309:T:C	rs2505338	T	C	T	Hoxd3_MA0912.1	12	1	+	7.953877995771311	9.160629915776175	AAGGGCTAATTATAGG
chr10	32944724	32944725	chr10:32944725:G:A	rs80154515	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	32971594	32971595	chr10:32971595:G:A	rs77400832	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	33129792	33129793	chr10:33129793:C:T	rs12416551	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	33201590	33201591	chr10:33201591:T:G	rs2284948	T	G	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	33233976	33233977	chr10:33233977:T:C	rs113376539	T	C	T	Hoxd3_MA0912.1	9	1	+	9.71944398489729	2.8308715253319257	TTGTGCTCATTAACTT
chr10	33272631	33272632	chr10:33272632:A:G	rs17296436	A	G	A	Hoxd3_MA0912.1	4	1	+	8.386002984640852	8.990239713153226	CTGTATTCATTAAAGC
chr10	33272645	33272646	chr10:33272646:C:T	rs17296443	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	33279589	33279590	chr10:33279590:G:C	rs2776924	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	33331591	33331592	chr10:33331592:C:A	rs72790263	C	A	C	Hoxd3_MA0912.1	5	1	-	9.001255352972498	9.130050461178067	TTTAGGTAATTAGAAT
chr10	33417661	33417662	chr10:33417662:C:T	rs11009375	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	33655204	33655205	chr10:33655205:G:T	rs7913788	G	T	G	Hoxd3_MA0912.1	13	1	+	8.809655839747188	9.783497021947896	TTGAGTTAATGAAGCC
chr10	33808080	33808081	chr10:33808081:A:C	rs2777531	A	C	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	33810955	33810956	chr10:33810956:A:G	rs56162122	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr10	34058868	34058869	chr10:34058869:C:T	rs7900702	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	34199435	34199436	chr10:34199436:G:A	rs629039	G	A	G	Hoxd3_MA0912.1	3	1	+	9.167891531702535	9.281989282741558	AAGGGGTAATTGCCCT
chr10	34732554	34732555	chr10:34732555:G:A	rs35190695	G	A	G	Hoxd3_MA0912.1	15	1	+	8.39580172532146	7.554803098362244	TTCTTTTAATTAGCCG
chr10	34790056	34790057	chr10:34790057:T:C	rs151229916	T	C	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	35332403	35332404	chr10:35332404:A:C	rs73264657	A	C	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr10	35644549	35644550	chr10:35644550:C:T	rs10454470	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr10	35746119	35746120	chr10:35746120:G:A	rs946558	G	A	a	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	35848747	35848748	chr10:35848748:A:G	rs16905746	A	G	A	Hoxd3_MA0912.1	11	1	+	10.28379000176905	8.497864053588057	CTTTGCTAATTACACT
chr10	36096602	36096603	chr10:36096603:C:T	rs10827597	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr10	36109825	36109826	chr10:36109826:G:A	rs7092760	G	A	A	Hoxd3_MA0912.1	2	1	+	8.951551706531573	7.501716662374535	CTGGGATAATTGATCC
chr10	36346279	36346280	chr10:36346280:C:T	rs4934569	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	36507103	36507104	chr10:36507104:G:T	rs7897758	G	T	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	36616325	36616326	chr10:36616326:G:A	rs1889028	G	A	G	Hoxd3_MA0912.1	15	1	-	8.913440186644275	9.691144755232283	TTGTGCCAATTACAGC
chr10	37975293	37975294	chr10:37975294:G:A	rs72791791	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	38153490	38153491	chr10:38153491:G:T	rs2505240	G	T	G	Hoxd3_MA0912.1	4	1	+	8.703016609279398	8.098779880767024	TTGTGTTCATTAACAC
chr10	38153492	38153493	chr10:38153493:T:C	rs2505241	T	C	T	Hoxd3_MA0912.1	6	1	+	8.703016609279398	6.917090661098405	TTGTGTTCATTAACAC
chr10	38607775	38607776	chr10:38607776:G:T	rs1203169149	G	T	.	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	38815081	38815082	chr10:38815082:A:T	rs7074243	A	T	.	Hoxd3_MA0912.1	33	0	+	0	0	.
chr10	41577186	41577187	chr10:41577187:C:G	rs1377445705	C	G	.	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	41584270	41584271	chr10:41584271:G:C	rs1196524627	G	C	.	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	41584306	41584307	chr10:41584307:T:A	rs1490533102	T	A	.	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	41584308	41584309	chr10:41584309:T:A	chr10:41584309:T:A	T	A	.	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	41584310	41584311	chr10:41584311:A:G	chr10:41584311:A:G	A	G	.	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	42488937	42488938	chr10:42488938:G:T	rs1255369	G	T	.	Hoxd3_MA0912.1	32	0	-	0	0	.
chr10	42761313	42761314	chr10:42761314:C:A	rs515365	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr10	42864635	42864636	chr10:42864636:T:C	rs566664301	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr10	43004032	43004033	chr10:43004033:C:T	rs1254986	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	43126919	43126920	chr10:43126920:T:A	rs2075913	T	A	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	43318600	43318601	chr10:43318601:G:A	rs2503875	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	43400551	43400552	chr10:43400552:G:A	rs10899799	G	A	A	Hoxd3_MA0912.1	14	1	-	7.868775965561332	7.3044395194290415	TTGAGGCCATTAAACC
chr10	43781943	43781944	chr10:43781944:G:A	rs74436621	G	A	G	Hoxd3_MA0912.1	13	1	-	10.907281670189583	10.303044941677209	CTGGACTAATTAGCGT
chr10	43941621	43941622	chr10:43941622:T:A	rs114522310	T	A	T	Hoxd3_MA0912.1	3	1	-	11.482213957424351	10.91787751129206	CTGAGTTAATTAATGG
chr10	44403513	44403514	chr10:44403514:C:T	rs1779379	C	T	C	Hoxd3_MA0912.1	14	1	+	7.875640557220013	7.311304111087722	CTGGAGCAATGACACT
chr10	44471684	44471685	chr10:44471685:T:C	rs10900043	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr10	44471728	44471729	chr10:44471729:G:C	rs11239061	G	C	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr10	44471732	44471733	chr10:44471733:G:A	rs1413517	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr10	44864452	44864453	chr10:44864453:G:A	rs79048912	G	A	G	Hoxd3_MA0912.1	2	1	+	9.796049429686061	8.346214385529022	TTGGGCTAATTAGCAG
chr10	44918192	44918193	chr10:44918193:G:T	rs7082940	G	T	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	45456267	45456268	chr10:45456268:G:A	rs3740111	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	45547483	45547484	chr10:45547484:A:G	rs12779976	A	G	G	Hoxd3_MA0912.1	6	1	-	7.931937541648615	6.146011593467621	CAGGGATAATTATGGT
chr10	45562046	45562047	chr10:45562047:A:G	rs907946752	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	45964933	45964934	chr10:45964934:T:G	rs1308001777	T	G	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	46219242	46219243	chr10:46219243:T:G	rs61843562	T	G	t	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	46250731	46250732	chr10:46250732:G:A	rs4631821	G	A	.	Hoxd3_MA0912.1	14	1	-	7.8162704681834025	7.251934022051112	CTGAGGCAATGACACC
chr10	46292710	46292711	chr10:46292711:A:G	rs11259777	A	G	.	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	46514514	46514515	chr10:46514515:C:G	rs28421546	C	G	c	Hoxd3_MA0912.1	2	1	-	7.290926450137408	5.507452032443459	CTGGGCCAATGACTGG
chr10	47239267	47239268	chr10:47239268:T:C	rs4075539	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr10	47383290	47383291	chr10:47383291:G:T	rs1993493	G	T	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr10	47402754	47402755	chr10:47402755:T:C	rs1051759553	T	C	T	Hoxd3_MA0912.1	9	1	+	7.685674791999537	0.7971023324341745	CTGAGCTAATGAGGTT
chr10	47402757	47402758	chr10:47402758:G:C	rs12243130	G	C	G	Hoxd3_MA0912.1	12	1	+	7.685674791999537	8.653197022938567	CTGAGCTAATGAGGTT
chr10	48279692	48279693	chr10:48279693:G:A	rs61188006	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	48439223	48439224	chr10:48439224:T:A	rs11598320	T	A	T	Hoxd3_MA0912.1	6	1	+	8.27217032286977	3.9344792617757274	CTGAGATCATTATTGT
chr10	48524929	48524930	chr10:48524930:G:C	rs10857592	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	48935269	48935270	chr10:48935270:A:C	chr10:48935270:A:C	A	C	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	49024958	49024959	chr10:49024959:T:C	rs61848154	T	C	T	Hoxd3_MA0912.1	6	1	+	8.925500874077178	7.139574925896186	AAGAGGTAATTAAGTT
chr10	49180319	49180320	chr10:49180320:G:A	rs73306709	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr10	49309937	49309938	chr10:49309938:A:C	rs56377743	A	C	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	49408698	49408699	chr10:49408699:G:A	rs10857485	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr10	49408703	49408704	chr10:49408704:C:T	rs79745416	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	49621433	49621434	chr10:49621434:G:A	rs4615945	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	49621438	49621439	chr10:49621439:A:T	rs2377878	A	T	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr10	50291884	50291885	chr10:50291885:G:T	rs4935597	G	T	G	Hoxd3_MA0912.1	3	1	+	7.731804144976346	7.281565449883079	CTGGTGTAATTGGGGT
chr10	50323299	50323300	chr10:50323300:A:G	rs2842096	A	G	G	Hoxd3_MA0912.1	4	1	-	8.640722723124302	7.666881540923594	ATGCTGTAATTAGTGT
chr10	50504355	50504356	chr10:50504356:T:C	rs78279949	T	C	T	Hoxd3_MA0912.1	12	1	+	10.292736115273755	11.499488035278619	TTGGACTAATTATACT
chr10	50549942	50549943	chr10:50549943:C:T	rs3011790	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	50741272	50741273	chr10:50741273:C:T	rs6479701	C	T	.	Hoxd3_MA0912.1	27	0	-	0	0	.
chr10	50789122	50789123	chr10:50789123:C:T	rs76667726	C	T	C	Hoxd3_MA0912.1	10	1	-	8.03488725947172	3.229146383021812	TTTGGCTAATGACACC
chr10	50789144	50789145	chr10:50789145:A:C	rs116935810	A	C	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	51020182	51020183	chr10:51020183:A:T	rs6479861	A	T	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	51171026	51171027	chr10:51171027:G:A	rs9415760	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	51171035	51171036	chr10:51171036:T:C	rs9415761	T	C	T	Hoxd3_MA0912.1	11	1	-	8.316455067327325	6.5305291191463315	TTTGGATAATGACCTT
chr10	51301739	51301740	chr10:51301740:G:C	rs10733816	G	C	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	51622576	51622577	chr10:51622577:C:T	rs10762252	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	51654806	51654807	chr10:51654807:C:T	rs1922129	C	T	T	Hoxd3_MA0912.1	2	1	-	8.764567393006645	7.314732348849608	CCGAAATAATTAAAGT
chr10	51680153	51680154	chr10:51680154:C:T	rs117902424	C	T	C	Hoxd3_MA0912.1	14	1	-	7.649543707412044	6.70557837764791	CGTGGCTAATTAAAGG
chr10	51690006	51690007	chr10:51690007:T:G	rs67262175	T	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr10	51770984	51770985	chr10:51770985:G:A	rs192221369	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	52117454	52117455	chr10:52117455:C:T	rs34447589	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	52269791	52269792	chr10:52269792:C:A	rs4935321	C	A	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	52308471	52308472	chr10:52308472:T:G	rs563688058	T	G	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	52308473	52308474	chr10:52308474:A:C	rs965033674	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	52771700	52771701	chr10:52771701:G:A	rs7095891	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	52863920	52863921	chr10:52863921:A:G	rs17588890	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	52879784	52879785	chr10:52879785:G:A	rs2067826	G	A	G	Hoxd3_MA0912.1	14	1	-	7.701662801463066	7.137326355330776	CTGGGCCAATTGCTCC
chr10	52879804	52879805	chr10:52879805:T:C	rs2067827	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	53070354	53070355	chr10:53070355:G:A	rs10824877	G	A	G	Hoxd3_MA0912.1	2	1	+	8.633017988886735	7.1831829447296975	CTGAACTCATTAAAGC
chr10	53070356	53070357	chr10:53070357:A:G	rs10824878	A	G	A	Hoxd3_MA0912.1	4	1	+	8.633017988886735	9.237254717399109	CTGAACTCATTAAAGC
chr10	53597137	53597138	chr10:53597138:T:G	rs6481025	T	G	T	Hoxd3_MA0912.1	1	1	+	9.560478842113369	7.476418354577239	TTTAGCTAATTACCAG
chr10	53607808	53607809	chr10:53607809:G:A	rs1489843	G	A	G	Hoxd3_MA0912.1	6	1	-	7.0631734362656555	8.849099384446648	CTGGCTCAATTAGGCT
chr10	53637889	53637890	chr10:53637890:T:C	rs11003723	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr10	53675406	53675407	chr10:53675407:G:A	rs745543	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	54279686	54279687	chr10:54279687:G:A	rs183359126	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	54558559	54558560	chr10:54558560:C:G	rs1316983	C	G	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	54679753	54679754	chr10:54679754:A:T	rs57629813	A	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	54711112	54711113	chr10:54711113:G:A	rs556700939	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr10	55081425	55081426	chr10:55081426:A:G	rs10825458	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	55134274	55134275	chr10:55134275:T:G	rs10825469	T	G	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	55862961	55862962	chr10:55862962:G:C	rs7095315	G	C	C	Hoxd3_MA0912.1	15	1	+	7.841148384369605	7.887452952411292	TGGAGTTAATTGAACG
chr10	55959402	55959403	chr10:55959403:T:A	rs1046787338	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr10	56226687	56226688	chr10:56226688:G:A	rs2393013	G	A	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr10	56733334	56733335	chr10:56733335:G:T	rs4935660	G	T	T	Hoxd3_MA0912.1	14	1	-	9.03905710407013	7.918676409021549	CAGGGCTAATTGATCT
chr10	57599135	57599136	chr10:57599136:T:A	rs79263686	T	A	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	57657715	57657716	chr10:57657716:C:T	rs7474675	C	T	C	Hoxd3_MA0912.1	5	1	+	8.516488484913882	8.83380992680029	CTCCACTAATTACCTT
chr10	58817495	58817496	chr10:58817496:C:T	rs41305703	C	T	C	Hoxd3_MA0912.1	15	1	-	9.155985513548014	8.314986886588798	ATGGTTTAATTAAAAG
chr10	58820874	58820875	chr10:58820875:T:C	rs1899979	T	C	T	Hoxd3_MA0912.1	10	1	+	8.72277014497698	1.9430869023465536	CTGAGTTCATTGCACT
chr10	58971768	58971769	chr10:58971769:G:T	rs4245581	G	T	G	Hoxd3_MA0912.1	15	1	+	10.687589867045313	11.511599003675007	TTGGTGTAATTACAGG
chr10	59175358	59175359	chr10:59175359:T:A	rs78490298	T	A	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	59479415	59479416	chr10:59479416:C:A	rs11006526	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	59517353	59517354	chr10:59517354:C:T	rs78899463	C	T	C	Hoxd3_MA0912.1	2	1	+	7.134058904257207	7.60034275240041	CTCTGATCATTACCCC
chr10	59561862	59561863	chr10:59561863:G:A	rs61860789	G	A	G	Hoxd3_MA0912.1	14	1	-	7.617310070799974	7.0529736246676835	GTGAGCCAATTAAACC
chr10	59595791	59595792	chr10:59595792:G:A	rs146605195	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr10	59626015	59626016	chr10:59626016:T:C	rs4948236	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	59879616	59879617	chr10:59879617:A:C	rs2450470	A	C	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	59879618	59879619	chr10:59879619:T:C	rs2440909	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	59945998	59945999	chr10:59945999:C:G	rs73269307	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	60067529	60067530	chr10:60067530:T:C	rs72818486	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	60355288	60355289	chr10:60355289:C:T	rs7904226	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	60369833	60369834	chr10:60369834:T:A	rs79131601	T	A	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr10	60437165	60437166	chr10:60437166:C:A	chr10:60437166:C:A	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	60560864	60560865	chr10:60560865:C:G	rs117685611	C	G	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	60589500	60589501	chr10:60589501:T:C	rs10761523	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	60955499	60955500	chr10:60955500:G:A	rs4309112	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	61163486	61163487	chr10:61163487:A:G	rs117737332	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	61163504	61163505	chr10:61163505:C:T	rs11818852	C	T	C	Hoxd3_MA0912.1	4	1	-	9.35930551399798	8.755068785485605	TTGCGGCAATTACCTT
chr10	61410884	61410885	chr10:61410885:G:A	rs573809974	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	61762899	61762900	chr10:61762900:A:T	rs2120702	A	T	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	61790916	61790917	chr10:61790917:T:C	rs2218436	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	61830990	61830991	chr10:61830991:A:G	rs4948477	A	G	A	Hoxd3_MA0912.1	11	1	+	7.6044830298959685	5.8185570817149745	GTGAGCTCATTATCCT
chr10	61861549	61861550	chr10:61861550:G:A	rs7092338	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	61903802	61903803	chr10:61903803:A:G	rs72833334	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr10	61903832	61903833	chr10:61903833:C:A	rs553205940	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr10	62163335	62163336	chr10:62163336:A:T	rs4314953	A	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	62225623	62225624	chr10:62225624:C:G	rs1545020	C	G	C	Hoxd3_MA0912.1	12	1	+	8.266689547884088	7.2991673169450575	ATGACTTCATTACACT
chr10	62654299	62654300	chr10:62654300:G:A	rs7071642	G	A	A	Hoxd3_MA0912.1	0	1	-	8.640105066121421	8.69261056349935	CTGGCTTAATGACTGT
chr10	62892485	62892486	chr10:62892486:A:G	rs7914009	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr10	62914069	62914070	chr10:62914070:C:T	rs4746725	C	T	t	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	62997049	62997050	chr10:62997050:T:A	rs72837442	T	A	T	Hoxd3_MA0912.1	10	1	+	8.378160883161302	1.5984776405308734	CTTGTCTAATTAGCTG
chr10	63166721	63166722	chr10:63166722:C:T	rs4747045	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	63166740	63166741	chr10:63166741:G:A	rs192780904	G	A	G	Hoxd3_MA0912.1	5	1	+	9.686506699513721	8.961943322720398	TATAGGTAATTAATGT
chr10	63859810	63859811	chr10:63859811:T:C	rs1880068	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	63859824	63859825	chr10:63859825:A:G	rs11599476	A	G	A	Hoxd3_MA0912.1	0	1	+	8.373421419989986	7.0529736246676835	ATGATCCAATTACCTC
chr10	63921381	63921382	chr10:63921382:A:G	rs1916474	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	64393239	64393240	chr10:64393240:T:C	rs2818003	T	C	T	Hoxd3_MA0912.1	8	1	-	8.340608214844586	1.4520357552792256	ATGGATCAATTAAGCT
chr10	64393252	64393253	chr10:64393253:T:C	rs2818002	T	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	64396563	64396564	chr10:64396564:A:T	rs1462890997	A	T	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr10	65234102	65234103	chr10:65234103:C:G	rs76830352	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr10	65341519	65341520	chr10:65341520:A:C	rs10761955	A	C	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	65342385	65342386	chr10:65342386:A:G	rs76543300	A	G	A	Hoxd3_MA0912.1	12	1	+	9.022801476626901	8.05527924568787	CTGTTCTCATTAATCT
chr10	65683042	65683043	chr10:65683043:A:G	rs12266949	A	G	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	65900354	65900355	chr10:65900355:G:A	rs7911866	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr10	66025217	66025218	chr10:66025218:A:G	rs10996833	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	66025231	66025232	chr10:66025232:G:A	rs56067524	G	A	G	Hoxd3_MA0912.1	4	1	-	7.92799795172849	8.901839133929197	TTGTCCTCATTAACCC
chr10	66025236	66025237	chr10:66025237:G:A	rs56302625	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	66064057	66064058	chr10:66064058:T:A	rs12571490	T	A	T	Hoxd3_MA0912.1	7	1	-	7.934631512686383	1.1549482700559546	GTGAGTCAATTAAACC
chr10	66516697	66516698	chr10:66516698:T:C	rs10762073	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	66672122	66672123	chr10:66672123:G:C	rs2894017	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	66673448	66673449	chr10:66673449:G:A	rs141346314	G	A	g	Hoxd3_MA0912.1	35	0	-	0	0	.
chr10	66684554	66684555	chr10:66684555:T:A	rs2394295	T	A	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	66792799	66792800	chr10:66792800:A:G	rs71496012	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr10	66792800	66792801	chr10:66792801:A:G	rs75132030	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr10	66821700	66821701	chr10:66821701:T:A	rs12765148	T	A	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr10	67791117	67791118	chr10:67791118:G:A	rs1051175704	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr10	67791158	67791159	chr10:67791159:A:G	chr10:67791159:A:G	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr10	68007653	68007654	chr10:68007654:C:T	rs7087233	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	68086968	68086969	chr10:68086969:T:A	rs471962	T	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr10	68304148	68304149	chr10:68304149:T:A	rs72795494	T	A	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	68407702	68407703	chr10:68407703:A:G	rs112234435	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr10	68872154	68872155	chr10:68872155:T:C	rs551476744	T	C	T	Hoxd3_MA0912.1	8	1	-	8.716834836169227	1.8282623766038641	CTCAACTAATTACCCA
chr10	69108297	69108298	chr10:69108298:C:T	rs74847294	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr10	69124757	69124758	chr10:69124758:A:G	rs61868341	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr10	69124794	69124795	chr10:69124795:C:G	rs143052211	C	G	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr10	69236467	69236468	chr10:69236468:T:A	rs10998659	T	A	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	69282003	69282004	chr10:69282004:C:G	rs12253706	C	G	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	69316796	69316797	chr10:69316797:C:G	rs7084213	C	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	69317800	69317801	chr10:69317801:G:C	rs111804732	G	C	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	69359451	69359452	chr10:69359452:T:C	rs7079157	T	C	C	Hoxd3_MA0912.1	10	1	+	8.94860418132276	2.1689209386923327	CTGGAATAATTGATGT
chr10	69363013	69363014	chr10:69363014:A:G	rs77802394	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	69644790	69644791	chr10:69644791:G:T	rs766855258	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	69747868	69747869	chr10:69747869:A:C	rs10762310	A	C	A	Hoxd3_MA0912.1	1	1	-	6.718434083676251	4.634373596140121	TTGTGGCAATGAGCGG
chr10	69855367	69855368	chr10:69855368:A:G	rs2683560	A	G	A	Hoxd3_MA0912.1	8	1	+	7.631617042846809	0.7430445832814476	CTGGACTAATGACAGA
chr10	69950385	69950386	chr10:69950386:G:A	rs4746013	G	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	69975136	69975137	chr10:69975137:T:A	rs16927161	T	A	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	70110357	70110358	chr10:70110358:T:C	rs2394654	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr10	70693808	70693809	chr10:70693809:C:T	rs1079352	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	70912493	70912494	chr10:70912494:A:G	rs10999581	A	G	A	Hoxd3_MA0912.1	8	1	+	10.476668810057388	3.5880963504920262	ATGATTTAATTACCTC
chr10	70917453	70917454	chr10:70917454:C:T	rs117080158	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	70927326	70927327	chr10:70927327:C:T	rs7902866	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	70954522	70954523	chr10:70954523:C:T	rs10823644	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	70967690	70967691	chr10:70967691:G:A	rs72802551	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	70983423	70983424	chr10:70983424:T:A	rs1767179	T	A	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	70986385	70986386	chr10:70986386:C:T	rs1614131	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	70998300	70998301	chr10:70998301:G:A	rs11594745	G	A	G	Hoxd3_MA0912.1	0	1	-	11.46204103150589	11.514546528883821	CTGGTGTAATTAACCC
chr10	71020360	71020361	chr10:71020361:T:A	rs4746077	T	A	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	71289564	71289565	chr10:71289565:G:A	rs16928641	G	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr10	71314112	71314113	chr10:71314113:G:A	rs10400148	G	A	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	71314122	71314123	chr10:71314123:T:G	rs11819678	T	G	T	Hoxd3_MA0912.1	1	1	+	8.862085573464665	6.778025085928532	TTTTTTTAATTAGCCG
chr10	71323709	71323710	chr10:71323710:A:G	rs10999773	A	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	71513155	71513156	chr10:71513156:A:C	rs6480527	A	C	C	Hoxd3_MA0912.1	8	1	+	8.490440260415603	3.9997630736486105	ATGGTTTAATTGCTCG
chr10	71590187	71590188	chr10:71590188:T:G	rs148713917	T	G	T	Hoxd3_MA0912.1	14	1	+	9.912603656907889	10.300524737755731	CTGAGTCAATTAACTG
chr10	71653296	71653297	chr10:71653297:T:G	rs1868008	T	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	71826827	71826828	chr10:71826828:A:G	rs2854992	A	G	G	Hoxd3_MA0912.1	10	1	-	9.153715186330057	2.37403194369963	TGGTTGTAATTACTCT
chr10	71982823	71982824	chr10:71982824:C:T	rs55740104	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	72000131	72000132	chr10:72000132:T:C	rs4148933	T	C	C	Hoxd3_MA0912.1	9	1	+	7.439628623038816	0.5510561634734534	ATGGAGCAATTGCCTT
chr10	72213484	72213485	chr10:72213485:A:T	rs76088137	A	T	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	72298712	72298713	chr10:72298713:C:G	rs10762507	C	G	G	Hoxd3_MA0912.1	0	1	+	7.9814422102840705	5.997065780400963	CAGCATTCATTAACCT
chr10	72364398	72364399	chr10:72364399:A:T	rs139644863	A	T	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	72364448	72364449	chr10:72364449:T:G	rs72808177	T	G	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr10	74088758	74088759	chr10:74088759:G:A	rs6480715	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	74114161	74114162	chr10:74114162:C:G	rs71579378	C	G	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr10	74163452	74163453	chr10:74163453:A:C	rs141562698	A	C	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr10	74703681	74703682	chr10:74703682:G:C	rs7087566	G	C	G	Hoxd3_MA0912.1	6	1	-	8.37125640390815	3.412546182676813	TTTAGTCAATTACCCA
chr10	74738942	74738943	chr10:74738943:A:T	rs11001129	A	T	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	74927158	74927159	chr10:74927159:T:A	rs11001206	T	A	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr10	74950038	74950039	chr10:74950039:C:A	rs10762649	C	A	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	75072228	75072229	chr10:75072229:G:A	rs182436433	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	75097071	75097072	chr10:75097072:T:C	rs12256732	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	75211570	75211571	chr10:75211571:C:T	rs114059796	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr10	75377745	75377746	chr10:75377746:T:C	rs113429919	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	76134071	76134072	chr10:76134072:A:C	rs12355465	A	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	76246378	76246379	chr10:76246379:A:G	rs1247487	A	G	G	Hoxd3_MA0912.1	8	1	+	7.714744001191379	0.8261715416260168	TTGCAGTAATTGCAGG
chr10	76395383	76395384	chr10:76395384:T:C	rs749128	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	76681403	76681404	chr10:76681404:T:C	rs10824434	T	C	T	Hoxd3_MA0912.1	8	1	-	8.360740981032922	1.4721685214675606	CTGAGGTAATTGTTGG
chr10	76885977	76885978	chr10:76885978:T:A	rs78082918	T	A	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	76903213	76903214	chr10:76903214:C:T	rs187546812	C	T	C	Hoxd3_MA0912.1	4	1	-	8.062599344722146	7.458362616209772	CTCCGGTAATTATACT
chr10	77221296	77221297	chr10:77221297:C:T	rs536297	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	77291203	77291204	chr10:77291204:C:T	rs79852806	C	T	C	Hoxd3_MA0912.1	12	1	+	7.939189743438499	6.732437823433636	ATGCCTTAATTACAGG
chr10	77382145	77382146	chr10:77382146:G:A	rs656283	G	A	G	Hoxd3_MA0912.1	3	1	+	7.954560036377789	8.068657787416813	TTGGGGTAATTTCTCT
chr10	77495011	77495012	chr10:77495012:G:T	rs150074374	G	T	G	Hoxd3_MA0912.1	13	1	-	8.451708105887171	7.847471377374797	ATGAGATCATTAGCGT
chr10	77499090	77499091	chr10:77499091:T:A	rs74504208	T	A	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	77499091	77499092	chr10:77499092:C:T	rs16934917	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	77639390	77639391	chr10:77639391:G:A	rs2812420	G	A	g	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	78049301	78049302	chr10:78049302:C:T	rs7092487	C	T	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	78264502	78264503	chr10:78264503:C:A	rs11002473	C	A	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr10	78278293	78278294	chr10:78278294:C:T	rs150414732	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	78416098	78416099	chr10:78416099:T:C	rs150688128	T	C	T	Hoxd3_MA0912.1	3	1	+	7.713755199338445	6.977073976758771	CTTTGCTAATTGCCTG
chr10	78665078	78665079	chr10:78665079:A:G	chr10:78665079:A:G	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	78777109	78777110	chr10:78777110:G:A	rs10824639	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	79004511	79004512	chr10:79004512:A:T	rs10740491	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	79242074	79242075	chr10:79242075:G:A	rs117792952	G	A	G	Hoxd3_MA0912.1	12	1	-	7.339455411238072	6.132703491233208	CTGTCATCATTACCCC
chr10	79274333	79274334	chr10:79274334:C:T	rs373448144	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	79274356	79274357	chr10:79274357:A:G	rs117656719	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	79331805	79331806	chr10:79331806:A:C	rs10824743	A	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	79479864	79479865	chr10:79479865:C:A	rs10824765	C	A	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr10	80179416	80179417	chr10:80179417:T:C	rs35483545	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	80282305	80282306	chr10:80282306:G:A	rs761087535	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	80547133	80547134	chr10:80547134:C:T	rs73307117	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	80552068	80552069	chr10:80552069:C:T	rs12412927	C	T	C	Hoxd3_MA0912.1	5	1	+	9.901940317909007	10.219261759795415	TTGACCTAATTACCTC
chr10	80642680	80642681	chr10:80642681:A:C	rs4934387	A	C	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	80680043	80680044	chr10:80680044:T:C	rs61859394	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	80707741	80707742	chr10:80707742:A:T	rs7920219	A	T	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	81095249	81095250	chr10:81095250:A:G	rs10748633	A	G	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	81531914	81531915	chr10:81531915:G:C	rs7091000	G	C	g	Hoxd3_MA0912.1	0	1	-	10.41377126666337	8.42939483678026	CTGACCTAATTAACCC
chr10	81953423	81953424	chr10:81953424:C:T	rs79283059	C	T	C	Hoxd3_MA0912.1	2	1	+	8.54120466830812	9.007488516451321	TTCCTGTAATTACTGT
chr10	81953442	81953443	chr10:81953443:T:A	chr10:81953443:T:A	T	A	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	82316975	82316976	chr10:82316976:G:T	rs11193663	G	T	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	82582602	82582603	chr10:82582603:A:G	rs968038	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	82724630	82724631	chr10:82724631:G:A	rs10509459	G	A	G	Hoxd3_MA0912.1	14	1	-	10.080551411995717	9.516214965863426	CTGATTTAATTAAGCG
chr10	83120580	83120581	chr10:83120581:G:A	rs34425197	G	A	g	Hoxd3_MA0912.1	0	1	+	7.617310070799974	8.937757866122277	GTGAGCCAATTAAACC
chr10	83235567	83235568	chr10:83235568:T:C	rs11197850	T	C	C	Hoxd3_MA0912.1	6	1	+	9.720557460867376	7.934631512686383	GTGAGTTAATTAAACC
chr10	83487934	83487935	chr10:83487935:C:T	rs11591451	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr10	83540071	83540072	chr10:83540072:A:T	rs187600119	A	T	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	83691976	83691977	chr10:83691977:A:G	rs10749420	A	G	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr10	83766071	83766072	chr10:83766072:C:A	rs11200493	C	A	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	84171817	84171818	chr10:84171818:A:G	rs4244945	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	84721568	84721569	chr10:84721569:G:T	rs10887355	G	T	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr10	84820733	84820734	chr10:84820734:A:C	rs1931872	A	C	A	Hoxd3_MA0912.1	10	1	-	7.721494420931453	5.747552054750933	CTGGCCTCATTAATCC
chr10	84820734	84820735	chr10:84820735:A:G	rs1931871	A	G	G	Hoxd3_MA0912.1	9	1	-	7.721494420931453	0.8329219613660899	CTGGCCTCATTAATCC
chr10	85608210	85608211	chr10:85608211:G:A	rs2664401	G	A	G	Hoxd3_MA0912.1	0	1	-	7.617406300244959	7.669911797622889	CGGGGGTAATGAAATT
chr10	85645351	85645352	chr10:85645352:C:T	rs115513214	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	85646330	85646331	chr10:85646331:T:C	rs17307596	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr10	86047632	86047633	chr10:86047633:G:A	rs10788478	G	A	G	Hoxd3_MA0912.1	4	1	+	7.717007265542857	7.112770537030483	CTGGGTTAATTGGAAC
chr10	86245047	86245048	chr10:86245048:T:C	rs2814345	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr10	86297901	86297902	chr10:86297902:A:G	rs7094105	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	86339455	86339456	chr10:86339456:G:A	rs12415259	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	86390568	86390569	chr10:86390569:A:G	rs186585178	A	G	A	Hoxd3_MA0912.1	8	1	+	8.532382783110318	1.6438103235449548	TTGGGGCCATTAAACT
chr10	86579302	86579303	chr10:86579303:C:A	rs61858157	C	A	A	Hoxd3_MA0912.1	15	1	-	9.99894504909027	10.822954185719965	ATGGGCTAATTACATG
chr10	87502959	87502960	chr10:87502960:A:G	rs3758478	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	87541256	87541257	chr10:87541257:A:G	rs11202441	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr10	87744585	87744586	chr10:87744586:T:C	rs7902841	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	87744586	87744587	chr10:87744587:G:A	rs7913763	G	A	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr10	87843164	87843165	chr10:87843165:G:A	rs560388758	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr10	87843666	87843667	chr10:87843667:G:A	rs10887759	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	88043174	88043175	chr10:88043175:C:T	rs149093036	C	T	C	Hoxd3_MA0912.1	0	1	+	7.6638315045899645	7.716337001967895	CTAGGGCAATTACCAG
chr10	88237874	88237875	chr10:88237875:G:A	rs61855359	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	88282251	88282252	chr10:88282252:C:T	rs78998244	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	88526058	88526059	chr10:88526059:A:G	rs150781825	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	88660557	88660558	chr10:88660558:G:T	rs1594601	G	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	88702958	88702959	chr10:88702959:C:T	rs303511	C	T	T	Hoxd3_MA0912.1	14	1	-	8.133432270304084	7.189466940539949	CTTTGCTAATGACTGT
chr10	88737897	88737898	chr10:88737898:T:C	rs405147	T	C	T	Hoxd3_MA0912.1	11	1	-	9.768478762114324	7.9825528139333315	ATGTACTAATTACATT
chr10	88794355	88794356	chr10:88794356:T:C	rs303502	T	C	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr10	89008482	89008483	chr10:89008483:T:C	rs7910435	T	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr10	89186103	89186104	chr10:89186104:A:T	rs10887928	A	T	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	89190336	89190337	chr10:89190337:A:G	rs10887930	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr10	89389121	89389122	chr10:89389122:A:G	rs304499	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	89413639	89413640	chr10:89413640:G:A	rs11203115	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	89476358	89476359	chr10:89476359:G:A	rs76918752	G	A	G	Hoxd3_MA0912.1	12	1	-	6.849717748902735	5.6429658288978715	ATGGACTCATTGCCCC
chr10	89846454	89846455	chr10:89846455:C:A	rs12770938	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	89849250	89849251	chr10:89849251:T:C	rs34461207	T	C	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	90002717	90002718	chr10:90002718:A:G	rs78423851	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	90171173	90171174	chr10:90171174:C:T	rs1329180	C	T	C	Hoxd3_MA0912.1	12	1	+	7.469153359827692	6.262401439822828	ATGAATCAATTGCCCC
chr10	90344557	90344558	chr10:90344558:C:G	rs17518785	C	G	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr10	90562561	90562562	chr10:90562562:A:G	rs11186227	A	G	A	Hoxd3_MA0912.1	15	1	-	7.735041057168646	6.957336488580638	CTGCTGTAATTGGCTT
chr10	90890026	90890027	chr10:90890027:T:C	rs11186351	T	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	90935949	90935950	chr10:90935950:G:A	rs12785137	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr10	90935954	90935955	chr10:90935955:A:C	rs117901966	A	C	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	90966323	90966324	chr10:90966324:C:A	rs61859602	C	A	A	Hoxd3_MA0912.1	5	1	+	8.184486343312807	7.648449300200319	CAGAACTAATGACAGT
chr10	91414664	91414665	chr10:91414665:T:G	rs1025003449	T	G	T	Hoxd3_MA0912.1	8	1	-	9.747752958656562	5.2570757718895695	CTTAAATAATTACCTT
chr10	91684404	91684405	chr10:91684405:T:C	rs4244929	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr10	91698492	91698493	chr10:91698493:A:G	rs7068311	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr10	92469988	92469989	chr10:92469989:A:T	rs7920976	A	T	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	92756905	92756906	chr10:92756906:C:T	rs12764758	C	T	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	93259117	93259118	chr10:93259118:C:A	rs7091432	C	A	A	Hoxd3_MA0912.1	14	1	+	9.420287085161823	8.299906390113241	CTTGAATAATTAACCC
chr10	93413080	93413081	chr10:93413081:C:T	rs57358319	C	T	T	Hoxd3_MA0912.1	12	1	+	7.848569958420027	6.641818038415163	TTGCCATAATTACAGC
chr10	93463107	93463108	chr10:93463108:T:C	rs17391155	T	C	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	93590130	93590131	chr10:93590131:A:C	rs11187540	A	C	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr10	94214450	94214451	chr10:94214451:T:C	rs10882405	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	94386465	94386466	chr10:94386466:C:T	rs112566029	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr10	94641896	94641897	chr10:94641897:C:G	rs12774450	C	G	c	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr10	95755649	95755650	chr10:95755650:C:G	rs138691825	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr10	95841612	95841613	chr10:95841613:A:G	rs11188502	A	G	A	Hoxd3_MA0912.1	7	1	+	9.043745231122898	2.2640619884924695	TTTGAATAATTATCCT
chr10	95944981	95944982	chr10:95944982:C:T	rs11188531	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr10	96244664	96244665	chr10:96244665:C:T	rs149071047	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	96453315	96453316	chr10:96453316:C:T	rs11188762	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr10	96621433	96621434	chr10:96621434:T:C	rs4917743	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	96671637	96671638	chr10:96671638:A:G	rs78340939	A	G	A	Hoxd3_MA0912.1	11	1	+	10.321846664170936	8.535920715989944	GTGAGTTAATTAAAGT
chr10	96841446	96841447	chr10:96841447:A:G	rs7921216	A	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	97105528	97105529	chr10:97105529:A:G	rs2817692	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	97266354	97266355	chr10:97266355:T:C	rs10786321	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr10	97394581	97394582	chr10:97394582:G:T	rs61861870	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	97406366	97406367	chr10:97406367:G:C	rs184019134	G	C	G	Hoxd3_MA0912.1	3	1	+	8.664902020417477	7.477982102744537	TTGGGGTAATTGCTGA
chr10	97659818	97659819	chr10:97659819:A:G	rs76284502	A	G	.	Hoxd3_MA0912.1	32	0	-	0	0	.
chr10	97920680	97920681	chr10:97920681:G:T	rs11189434	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr10	98047011	98047012	chr10:98047012:T:G	rs113078748	T	G	T	Hoxd3_MA0912.1	15	1	+	8.038878032254937	7.2148688956252425	TTTGGGTAATTGAGGT
chr10	98159218	98159219	chr10:98159219:A:G	rs4468282	A	G	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	98337711	98337712	chr10:98337712:T:C	rs7901537	T	C	T	Hoxd3_MA0912.1	1	1	+	9.251228092687821	7.1671676051516915	CTGTAGTCATTACCTT
chr10	98394594	98394595	chr10:98394595:C:A	rs80072032	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	98468422	98468423	chr10:98468423:T:C	rs187745297	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr10	99189134	99189135	chr10:99189135:A:G	rs139727640	A	G	A	Hoxd3_MA0912.1	5	1	-	11.254373378645397	10.937051936758989	ATGAGTTAATTAATTT
chr10	99600414	99600415	chr10:99600415:G:C	rs11190174	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	100760417	100760418	chr10:100760418:G:A	rs11599825	G	A	G	Hoxd3_MA0912.1	14	1	+	7.548555985975384	6.604590656211251	ATGGGTCAATGAACGG
chr10	101120011	101120012	chr10:101120012:G:T	rs11190836	G	T	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr10	101143851	101143852	chr10:101143852:A:G	rs4919518	A	G	G	Hoxd3_MA0912.1	8	1	+	8.91458579674234	2.0260133371769795	CTGTGATAATGACAGT
chr10	101144763	101144764	chr10:101144764:G:A	rs61873933	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr10	101287300	101287301	chr10:101287301:C:T	rs587854	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	101555420	101555421	chr10:101555421:G:A	rs4919552	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr10	101848643	101848644	chr10:101848644:C:G	rs181211130	C	G	C	Hoxd3_MA0912.1	13	1	+	8.538553631502541	6.960475720789459	TTGAGCTCATTAGCTC
chr10	102720901	102720902	chr10:102720902:G:A	rs12783444	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	103151598	103151599	chr10:103151599:A:G	rs12775302	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	103153895	103153896	chr10:103153896:G:A	rs11191582	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	103193622	103193623	chr10:103193623:T:C	rs1034410279	T	C	T	Hoxd3_MA0912.1	1	1	+	8.34385644942948	6.259795961893349	TTGGTCTAATGGACCT
chr10	103660763	103660764	chr10:103660764:T:G	chr10:103660764:T:G	T	G	T	Hoxd3_MA0912.1	12	1	-	9.147419574859162	9.147419574859162	TCGGGGTAATTAACCA
chr10	103758723	103758724	chr10:103758724:T:G	rs7923100	T	G	G	Hoxd3_MA0912.1	3	1	-	10.847992186126023	9.546974517414057	TTGATGTAATTACTGC
chr10	103770327	103770328	chr10:103770328:C:T	rs10748849	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	103850046	103850047	chr10:103850047:G:T	rs10883927	G	T	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr10	104055178	104055179	chr10:104055179:C:T	rs805692	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	104429233	104429234	chr10:104429234:T:C	rs11598049	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	104511603	104511604	chr10:104511604:A:T	rs2209964	A	T	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	104513018	104513019	chr10:104513019:A:C	rs139669867	A	C	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr10	104513054	104513055	chr10:104513055:A:G	rs10786801	A	G	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	104663709	104663710	chr10:104663710:G:C	rs78779586	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr10	104811301	104811302	chr10:104811302:G:C	rs1565419	G	C	T	Hoxd3_MA0912.1	14	1	-	9.635664133309927	9.459248768025478	TTAGAGTAATTATCCT
chr10	104852882	104852883	chr10:104852883:G:C	rs17117755	G	C	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr10	104935983	104935984	chr10:104935984:G:C	rs73342171	G	C	G	Hoxd3_MA0912.1	0	1	-	7.212033739671028	5.227657309787919	CTGATGCAATGACTCC
chr10	105138498	105138499	chr10:105138499:G:A	rs79899038	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	105843615	105843616	chr10:105843616:A:G	rs11192625	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr10	106286350	106286351	chr10:106286351:G:C	rs10748911	G	C	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr10	106399314	106399315	chr10:106399315:C:T	rs12217286	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	106640524	106640525	chr10:106640525:C:T	rs11192986	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr10	106817214	106817215	chr10:106817215:G:C	rs7100663	G	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr10	107179315	107179316	chr10:107179316:A:G	rs4085734	A	G	A	Hoxd3_MA0912.1	0	1	+	9.441252832061702	8.120805036739398	ATATGTTAATTAGCCT
chr10	107207140	107207141	chr10:107207141:G:A	rs17284802	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	107536651	107536652	chr10:107536652:C:A	rs184170706	C	A	C	Hoxd3_MA0912.1	12	1	+	9.78025125023069	9.78025125023069	TTTAGCTAATTACAAT
chr10	107638215	107638216	chr10:107638216:A:G	rs10884492	A	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr10	107672084	107672085	chr10:107672085:C:T	rs4622188	C	T	C	Hoxd3_MA0912.1	2	1	-	9.503128337232758	8.05329329307572	TTGTGCTAATGACTGT
chr10	108323585	108323586	chr10:108323586:C:G	rs11592528	C	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr10	108470185	108470186	chr10:108470186:C:A	rs116400304	C	A	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	108598497	108598498	chr10:108598498:T:G	rs2482597	T	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	108904413	108904414	chr10:108904414:C:G	rs74813718	C	G	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	109236517	109236518	chr10:109236518:C:A	rs11194492	C	A	c	Hoxd3_MA0912.1	11	1	-	8.030216021708796	5.4784509087957485	TTGGCATAATTGCCCC
chr10	109848918	109848919	chr10:109848919:C:T	rs685242	C	T	C	Hoxd3_MA0912.1	13	1	+	7.54438483511168	6.940148106599306	TTCTGCCAATTAGCGT
chr10	109893283	109893284	chr10:109893284:C:T	rs11194903	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr10	109961557	109961558	chr10:109961558:C:A	rs114415226	C	A	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr10	110009172	110009173	chr10:110009173:T:C	rs73349424	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	110392765	110392766	chr10:110392766:C:A	rs12571844	C	A	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	110413371	110413372	chr10:110413372:T:A	rs10749029	T	A	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	110425837	110425838	chr10:110425838:G:A	rs10884966	G	A	G	Hoxd3_MA0912.1	14	1	-	10.337779651664912	9.77344320553262	CTGGGTTAATTATTCG
chr10	110482779	110482780	chr10:110482780:T:C	rs56170699	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	110610418	110610419	chr10:110610419:G:A	rs111311991	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr10	110610439	110610440	chr10:110610440:G:A	rs10884998	G	A	G	Hoxd3_MA0912.1	12	1	-	8.764805690823296	7.558053770818433	GTGAAGTAATTACTGG
chr10	110620322	110620323	chr10:110620323:G:A	rs73353105	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr10	110643463	110643464	chr10:110643464:C:G	rs367757241	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr10	110643466	110643467	chr10:110643467:G:T	chr10:110643467:G:T	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	110738315	110738316	chr10:110738316:T:C	rs7099556	T	C	t	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr10	110783856	110783857	chr10:110783857:T:C	rs2146545	T	C	T	Hoxd3_MA0912.1	7	1	-	8.593691307730355	1.814008065099928	TTGGAGTAATGAAAAT
chr10	110783865	110783866	chr10:110783866:A:C	rs185151982	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr10	110798014	110798015	chr10:110798015:C:A	rs12356300	C	A	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	110821121	110821122	chr10:110821122:C:T	rs10787283	C	T	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr10	110850046	110850047	chr10:110850047:A:G	rs4918605	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr10	111138406	111138407	chr10:111138407:C:G	rs10466194	C	G	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	111175761	111175762	chr10:111175762:G:A	rs77816184	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr10	111250297	111250298	chr10:111250298:G:A	rs6585043	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	111301489	111301490	chr10:111301490:G:A	rs10885125	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	111970287	111970288	chr10:111970288:A:G	rs116349607	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	112248750	112248751	chr10:112248751:C:T	rs4918729	C	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	112356732	112356733	chr10:112356733:C:T	rs943261	C	T	C	Hoxd3_MA0912.1	3	1	-	9.63714728606931	9.751245037108333	TTCGGTTAATTAATGG
chr10	112356749	112356750	chr10:112356750:T:A	rs11195919	T	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	112424579	112424580	chr10:112424580:T:C	rs7097632	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	112632001	112632002	chr10:112632002:A:G	rs76763495	A	G	A	Hoxd3_MA0912.1	3	1	-	9.997068330536656	9.260387107956983	TTGTTATAATTACCAT
chr10	112783733	112783734	chr10:112783734:C:A	rs7898648	C	A	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr10	112793039	112793040	chr10:112793040:G:A	rs373385451	G	A	G	Hoxd3_MA0912.1	14	1	+	7.106027880362646	6.162062550598512	CTGCAGTAATTGTCGC
chr10	112797925	112797926	chr10:112797926:A:C	rs12249459	A	C	A	Hoxd3_MA0912.1	10	1	-	8.057428077977612	6.083485711797092	CTGAAACAATTGCCCT
chr10	112831287	112831288	chr10:112831288:C:G	rs11591487	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	112955157	112955158	chr10:112955158:C:A	rs57255539	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr10	112962014	112962015	chr10:112962015:A:G	rs116313472	A	G	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr10	112962474	112962475	chr10:112962475:T:A	rs74159625	T	A	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr10	113261818	113261819	chr10:113261819:C:A	rs7078078	C	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	113305925	113305926	chr10:113305926:C:T	rs10458734	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr10	113400442	113400443	chr10:113400443:C:T	rs11196319	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	113631852	113631853	chr10:113631853:G:A	rs17090786	G	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	113702037	113702038	chr10:113702038:A:G	rs12255142	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr10	113762415	113762416	chr10:113762416:G:T	rs2419879	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr10	113961604	113961605	chr10:113961605:A:G	rs460718	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	113961609	113961610	chr10:113961610:G:T	rs466328	G	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr10	114070958	114070959	chr10:114070959:C:G	rs4918889	C	G	C	Hoxd3_MA0912.1	5	1	+	7.294485619415422	7.483011953096259	GAGGGCTCATTAACGT
chr10	114362343	114362344	chr10:114362344:T:G	rs36110313	T	G	T	Hoxd3_MA0912.1	10	1	+	8.991511731387288	7.017569365206771	CAGATGTAATTAGATT
chr10	114479558	114479559	chr10:114479559:G:A	rs75969473	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr10	114607969	114607970	chr10:114607970:C:T	rs11196802	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	114657252	114657253	chr10:114657253:C:T	rs17092237	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr10	114914583	114914584	chr10:114914584:T:C	rs11196983	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr10	114974611	114974612	chr10:114974612:C:G	rs74159822	C	G	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr10	115518162	115518163	chr10:115518163:G:A	rs11197258	G	A	G	Hoxd3_MA0912.1	4	1	+	7.522079853200576	6.9178431246882015	CTGGGACAATTATAGG
chr10	115866982	115866983	chr10:115866983:C:T	rs72830992	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr10	116054229	116054230	chr10:116054230:C:G	rs180559	C	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr10	116722491	116722492	chr10:116722492:A:C	rs74161314	A	C	A	Hoxd3_MA0912.1	7	1	+	8.213446611993833	6.239504245813315	CTGGGTTAATGAACAA
chr10	116787078	116787079	chr10:116787079:G:A	rs10886010	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	117175861	117175862	chr10:117175862:G:C	rs73389330	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	117302724	117302725	chr10:117302725:C:T	rs2794418	C	T	C	Hoxd3_MA0912.1	13	1	-	8.39343552923434	9.367276711435048	TTGATTCAATTACGCC
chr10	117353745	117353746	chr10:117353746:A:G	rs4751623	A	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr10	117544584	117544585	chr10:117544585:A:G	rs855769	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	117734294	117734295	chr10:117734295:T:G	rs10510032	T	G	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr10	117743704	117743705	chr10:117743705:C:T	rs76753721	C	T	C	Hoxd3_MA0912.1	13	1	+	8.903195190976623	8.298958462464249	TTAAGTTAATTGCCGG
chr10	117804631	117804632	chr10:117804632:C:T	rs11198112	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr10	118384825	118384826	chr10:118384826:C:T	rs7083887	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr10	118494915	118494916	chr10:118494916:A:C	rs11198456	A	C	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr10	118529541	118529542	chr10:118529542:A:G	rs10749267	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr10	118908917	118908918	chr10:118908918:C:T	rs4751683	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	118928274	118928275	chr10:118928275:A:G	rs10886341	A	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	118964655	118964656	chr10:118964656:G:A	rs10886352	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr10	118983475	118983476	chr10:118983476:C:T	rs72826530	C	T	c	Hoxd3_MA0912.1	19	0	+	0	0	.
chr10	119061015	119061016	chr10:119061016:A:G	rs3824822	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	119221262	119221263	chr10:119221263:G:T	rs187868876	G	T	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr10	119242894	119242895	chr10:119242895:C:A	chr10:119242895:C:A	C	A	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	119352814	119352815	chr10:119352815:C:A	rs12415832	C	A	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr10	119410189	119410190	chr10:119410190:G:A	rs75619481	G	A	G	Hoxd3_MA0912.1	14	1	+	9.874686384256451	8.930721054492318	TTTTGTTAATTATCGT
chr10	119614431	119614432	chr10:119614432:A:G	rs2577333	A	G	G	Hoxd3_MA0912.1	8	1	+	8.71233608127439	1.823763621709028	GTGAGTCAATTAAACT
chr10	119644279	119644280	chr10:119644280:G:A	rs77026359	G	A	G	Hoxd3_MA0912.1	15	1	-	7.920277300656493	8.6979818692445	TTGTGGCAATTGACGC
chr10	119920460	119920461	chr10:119920461:A:G	rs79154601	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	119968721	119968722	chr10:119968722:G:A	rs66634931	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr10	119999455	119999456	chr10:119999456:T:C	rs7905785	T	C	T	Hoxd3_MA0912.1	8	1	-	7.002885940143001	0.1143134805776389	CTGGGGCAATTGCTCA
chr10	120181204	120181205	chr10:120181205:C:T	rs7915835	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	120209461	120209462	chr10:120209462:G:A	rs61284747	G	A	A	Hoxd3_MA0912.1	13	1	-	8.480865232101364	7.876628503588989	TGGAAGTAATTAACGA
chr10	120542115	120542116	chr10:120542116:G:C	rs4751790	G	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr10	120928222	120928223	chr10:120928223:C:T	rs1991643	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	121139589	121139590	chr10:121139590:C:A	rs10430702	C	A	c	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	121435277	121435278	chr10:121435278:T:C	rs117653306	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr10	121435294	121435295	chr10:121435295:G:T	rs7912092	G	T	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr10	121645623	121645624	chr10:121645624:C:G	rs4752573	C	G	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	121649167	121649168	chr10:121649168:G:C	rs6585748	G	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr10	121649172	121649173	chr10:121649173:C:T	rs191287526	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	121696980	121696981	chr10:121696981:C:T	rs80331021	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr10	122022953	122022954	chr10:122022954:A:G	rs2461219	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	122120019	122120020	chr10:122120020:G:A	rs78080037	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr10	122120028	122120029	chr10:122120029:G:A	rs10887078	G	A	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	122278556	122278557	chr10:122278557:G:A	rs7078071	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr10	122302937	122302938	chr10:122302938:G:A	rs11200542	G	A	G	Hoxd3_MA0912.1	5	1	+	8.47541143565421	7.750848058860887	CTGTGGTCATTACCAG
chr10	122330967	122330968	chr10:122330968:T:C	rs72828754	T	C	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	122479466	122479467	chr10:122479467:G:A	rs2736917	G	A	A	Hoxd3_MA0912.1	5	1	+	9.408848155505442	8.684284778712119	CAGGAGTAATTAAAGG
chr10	122479480	122479481	chr10:122479481:T:C	rs760338	T	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr10	122570229	122570230	chr10:122570230:A:T	rs3740222	A	T	t	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr10	122912138	122912139	chr10:122912139:C:T	rs7921647	C	T	t	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr10	123427666	123427667	chr10:123427667:A:G	rs10510131	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	123449627	123449628	chr10:123449628:G:A	rs79958903	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	123768511	123768512	chr10:123768512:G:A	rs753174527	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	123813801	123813802	chr10:123813802:G:A	rs190698805	G	A	T	Hoxd3_MA0912.1	13	1	-	8.527588141482425	7.923351412970052	TAGACATAATTAACGC
chr10	123901181	123901182	chr10:123901182:C:T	rs953380123	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	123958302	123958303	chr10:123958303:G:A	rs4468289	G	A	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	124131497	124131498	chr10:124131498:G:A	rs36197665	G	A	G	Hoxd3_MA0912.1	0	1	+	8.24848086225203	9.568928657574332	GAGGAGTAATTAATGT
chr10	124172087	124172088	chr10:124172088:T:G	chr10:124172088:T:G	T	G	T	Hoxd3_MA0912.1	11	1	-	7.795214191319147	1.0505780219068175	CTGGGACAATGACCTT
chr10	124172116	124172117	chr10:124172117:C:T	rs879008036	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr10	124257567	124257568	chr10:124257568:T:C	rs6597827	T	C	T	Hoxd3_MA0912.1	8	1	-	8.24584929647026	1.3572768369048958	TGGGGGCAATTACAGT
chr10	124320410	124320411	chr10:124320411:A:C	rs4962728	A	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	124339707	124339708	chr10:124339708:C:T	chr10:124339708:C:T	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr10	124339726	124339727	chr10:124339727:A:G	rs61863778	A	G	A	Hoxd3_MA0912.1	8	1	+	8.333342327017126	1.4447698674517637	TTGGGCCAATTATACC
chr10	124478680	124478681	chr10:124478681:C:T	rs17620482	C	T	C	Hoxd3_MA0912.1	14	1	-	8.797580527604701	7.853615197840568	CCGGGGCAATTACCGT
chr10	124737417	124737418	chr10:124737418:C:A	rs11598804	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr10	125063600	125063601	chr10:125063601:C:T	rs117657338	C	T	C	Hoxd3_MA0912.1	2	1	-	8.775315876126541	7.325480831969504	ATGTGGCAATTAATTT
chr10	125150593	125150594	chr10:125150594:C:T	rs35668433	C	T	C	Hoxd3_MA0912.1	4	1	-	8.720770584661171	8.116533856148797	CTTAGGTAATTAAGTC
chr10	125262983	125262984	chr10:125262984:A:G	rs12265838	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr10	125283383	125283384	chr10:125283384:A:G	rs138930553	A	G	A	Hoxd3_MA0912.1	0	1	+	9.789891017352101	8.469443222029797	ATGGAGCAATTAACCT
chr10	125283412	125283413	chr10:125283413:T:C	rs4962446	T	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr10	126179660	126179661	chr10:126179661:C:T	rs11244869	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr10	126558978	126558979	chr10:126558979:C:T	rs4962346	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr10	126694641	126694642	chr10:126694642:G:A	rs147703694	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr10	126696515	126696516	chr10:126696516:A:G	rs55843520	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr10	126853536	126853537	chr10:126853537:T:C	rs7920965	T	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr10	126869771	126869772	chr10:126869772:G:A	rs7917073	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr10	126911785	126911786	chr10:126911786:T:C	rs114499535	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	127034397	127034398	chr10:127034398:A:G	rs143476057	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	127034400	127034401	chr10:127034401:C:A	rs9418805	C	A	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr10	127034409	127034410	chr10:127034410:A:G	rs11018237	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr10	127148778	127148779	chr10:127148779:A:T	rs192435174	A	T	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr10	127385295	127385296	chr10:127385296:T:C	rs6482836	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	127550872	127550873	chr10:127550873:C:T	rs61872216	C	T	C	Hoxd3_MA0912.1	13	1	+	7.661999109900444	7.05776238138807	CTGAGTCCATTAACCA
chr10	127833876	127833877	chr10:127833877:T:C	rs486238	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr10	128062269	128062270	chr10:128062270:G:A	rs56365377	G	A	G	Hoxd3_MA0912.1	14	1	-	7.783449217441007	7.2191127713087155	CAGAGCTCATTGCCCT
chr10	128127721	128127722	chr10:128127722:C:T	rs2387328	C	T	C	Hoxd3_MA0912.1	14	1	+	8.926689579098753	8.362353132966462	TTTATCTAATGACCCT
chr10	128361514	128361515	chr10:128361515:A:G	rs11599357	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr10	128485958	128485959	chr10:128485959:G:A	rs11818187	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr10	128513983	128513984	chr10:128513984:C:A	rs116855225	C	A	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr10	128713589	128713590	chr10:128713590:T:C	rs4750716	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr10	128896252	128896253	chr10:128896253:G:A	rs12241573	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr10	129143525	129143526	chr10:129143526:C:G	rs7909469	C	G	C	Hoxd3_MA0912.1	5	1	+	8.63171822682662	8.820244560507458	CTGGTCTAATTACGGA
chr10	129351429	129351430	chr10:129351430:G:A	rs2622447	G	A	A	Hoxd3_MA0912.1	2	1	+	8.251704339777687	6.801869295620649	TTGGAATAATGAACTC
chr10	129501893	129501894	chr10:129501894:G:C	rs78009284	G	C	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr10	129563832	129563833	chr10:129563833:T:C	rs693300	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr10	129631134	129631135	chr10:129631135:A:C	rs753563603	A	C	A	Hoxd3_MA0912.1	10	1	-	9.274217647070369	7.300275280889851	CTGGTTTCATTAACAT
chr10	129757042	129757043	chr10:129757043:G:A	rs114924132	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	129785896	129785897	chr10:129785897:G:A	rs7908271	G	A	G	Hoxd3_MA0912.1	1	1	+	6.355768412946719	7.213592686320909	CGGAGCTAATGACGCC
chr10	129853120	129853121	chr10:129853121:C:T	rs76217111	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr10	129885720	129885721	chr10:129885721:T:C	rs184476234	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr10	129970080	129970081	chr10:129970081:A:T	rs74663589	A	T	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr10	129970716	129970717	chr10:129970717:C:T	chr10:129970717:C:T	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	130038724	130038725	chr10:130038725:G:A	rs111456126	G	A	g	Hoxd3_MA0912.1	10	1	+	7.280262571658042	2.474521695208133	CCTGGCTAATGAACCT
chr10	130205538	130205539	chr10:130205539:G:A	rs10764942	G	A	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	130371603	130371604	chr10:130371604:A:G	rs173380	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	130371621	130371622	chr10:130371622:C:T	rs900907	C	T	C	Hoxd3_MA0912.1	10	1	-	7.567231496038426	2.7614906195885167	CTGATTTCATGAGCCT
chr10	130376363	130376364	chr10:130376364:G:A	rs1872315	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr10	130718863	130718864	chr10:130718864:A:G	rs7067867	A	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr10	130719453	130719454	chr10:130719454:G:A	rs181050524	G	A	g	Hoxd3_MA0912.1	14	1	-	7.380035810454608	6.815699364322318	ATGAGCTCATGACCCC
chr10	130804604	130804605	chr10:130804605:C:T	rs1655163	C	T	C	Hoxd3_MA0912.1	5	1	-	7.889814652235678	7.165251275442355	CTGAGGTCATGAACAT
chr10	130804615	130804616	chr10:130804616:T:A	rs77773711	T	A	t	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	130878920	130878921	chr10:130878921:T:C	rs1655157	T	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr10	130924915	130924916	chr10:130924916:A:T	rs113550995	A	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	131004466	131004467	chr10:131004467:G:A	rs74945492	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr10	131084818	131084819	chr10:131084819:C:T	rs75924225	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr10	131084822	131084823	chr10:131084823:G:C	rs76759028	G	C	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr10	131084829	131084830	chr10:131084830:G:T	rs7090804	G	T	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	131129811	131129812	chr10:131129812:T:C	rs141427129	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr10	131143865	131143866	chr10:131143866:C:T	rs11017746	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr10	131143896	131143897	chr10:131143897:T:C	rs11017747	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr10	131163311	131163312	chr10:131163312:A:G	rs35645120	A	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr10	131332600	131332601	chr10:131332601:A:G	rs11017884	A	G	A	Hoxd3_MA0912.1	13	1	+	11.754491862919602	10.780650680718894	TTGATTTAATTACAGT
chr10	131382725	131382726	chr10:131382726:C:T	rs34801351	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr10	131475517	131475518	chr10:131475518:C:T	rs7091184	C	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr10	131519676	131519677	chr10:131519677:C:A	rs10741254	C	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr10	131557213	131557214	chr10:131557214:A:G	rs4342938	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr10	131561398	131561399	chr10:131561399:A:G	rs4331009	A	G	G	Hoxd3_MA0912.1	11	1	+	6.793872472372504	5.007946524191512	CTGGGCTAATGAGGTC
chr10	132007098	132007099	chr10:132007099:C:T	rs10870339	C	T	C	Hoxd3_MA0912.1	4	1	-	8.030849647205429	7.4266129186930545	CTGGGTAAATTACTCT
chr10	132147459	132147460	chr10:132147460:G:A	rs78826594	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr10	132147464	132147465	chr10:132147465:C:T	rs73397670	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr10	132265731	132265732	chr10:132265732:G:A	rs10870282	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	132265752	132265753	chr10:132265753:G:A	rs115568259	G	A	G	Hoxd3_MA0912.1	7	1	-	7.477826754531627	2.672085878081717	CTGTGCTCATTGGCCT
chr10	132881180	132881181	chr10:132881181:C:A	rs11146559	C	A	C	Hoxd3_MA0912.1	2	1	-	7.557598936244927	6.240408366694183	TTGGTCTCATTAGAGG
chr10	133068816	133068817	chr10:133068817:T:C	rs191476998	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr10	133463239	133463240	chr10:133463240:A:T	rs11817058	A	T	.	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	296232	296233	chr11:296233:T:C	rs12364171	T	C	-	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	296254	296255	chr11:296255:G:A	rs12277152	G	A	-	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	353756	353757	chr11:353757:C:T	rs7947784	C	T	T	Hoxd3_MA0912.1	13	1	+	8.123688425595784	7.51945169708341	GGGGATTAATTACCGT
chr11	395498	395499	chr11:395499:G:A	rs73400565	G	A	g	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	929110	929111	chr11:929111:C:T	rs7479473	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	943083	943084	chr11:943084:G:C	rs760704714	G	C	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	1017772	1017773	chr11:1017773:G:A	rs57384288	G	A	a	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr11	1275032	1275033	chr11:1275033:G:C	rs5744033	G	C	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr11	1548570	1548571	chr11:1548571:G:C	rs12791615	G	C	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr11	1624735	1624736	chr11:1624736:G:A	rs10837859	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	1640096	1640097	chr11:1640097:C:T	rs78651552	C	T	c	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr11	1896915	1896916	chr11:1896916:C:T	rs8181550	C	T	-	Hoxd3_MA0912.1	18	0	-	0	0	.
chr11	2135813	2135814	chr11:2135814:C:G	rs3213221	C	G	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	2177187	2177188	chr11:2177188:G:T	rs11042978	G	T	G	Hoxd3_MA0912.1	5	1	-	9.09156260144806	8.555525558335573	TAGGGCTAATTGCTCT
chr11	2185815	2185816	chr11:2185816:T:C	rs11564705	T	C	C	Hoxd3_MA0912.1	4	1	+	7.341720563543818	6.36787938134311	CCGATGTCATTACCGC
chr11	2262612	2262613	chr11:2262613:G:A	rs140386788	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	2807279	2807280	chr11:2807280:G:A	rs151267023	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	2807294	2807295	chr11:2807295:C:T	rs72844287	C	T	C	Hoxd3_MA0912.1	2	1	-	7.253610882136991	5.803775837979952	CCGGGCCAATTAGCTT
chr11	3198956	3198957	chr11:3198957:T:C	rs78413714	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	3380863	3380864	chr11:3380864:G:A	rs10741955	G	A	A	Hoxd3_MA0912.1	4	1	-	8.281238125807977	9.255079308008686	ATGACTCAATTACCCC
chr11	3582875	3582876	chr11:3582876:C:T	rs11028259	C	T	-	Hoxd3_MA0912.1	27	0	-	0	0	.
chr11	3671889	3671890	chr11:3671890:T:C	rs2231532	T	C	T	Hoxd3_MA0912.1	0	1	+	8.615428682219271	8.56292318484134	TTAGCTTAATTACACC
chr11	3880114	3880115	chr11:3880115:G:T	rs908283915	G	T	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	3955743	3955744	chr11:3955744:T:G	rs11828337	T	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	4187817	4187818	chr11:4187818:A:C	rs12295191	A	C	A	Hoxd3_MA0912.1	8	1	+	7.290926450137406	2.8002492633704144	CTGGTCTCATTGCCGG
chr11	4187832	4187833	chr11:4187833:G:C	rs12808421	G	C	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	4187843	4187844	chr11:4187844:G:T	rs142586573	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	5205238	5205239	chr11:5205239:T:G	rs12788935	T	G	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	5205240	5205241	chr11:5205241:T:A	rs12788941	T	A	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr11	5666331	5666332	chr11:5666332:G:C	rs10769167	G	C	G	Hoxd3_MA0912.1	2	1	+	10.965351339778794	9.181876922084847	ATGAAATAATTAACCT
chr11	6030098	6030099	chr11:6030099:T:C	rs77053285	T	C	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	6552553	6552554	chr11:6552554:T:C	rs11040918	T	C	T	Hoxd3_MA0912.1	8	1	-	7.934631512686383	1.0460590531210199	GTGAGTCAATTAAACC
chr11	6711605	6711606	chr11:6711606:A:G	rs11040976	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr11	7439915	7439916	chr11:7439916:A:G	rs73403313	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	7439937	7439938	chr11:7439938:T:C	rs4072102	T	C	T	Hoxd3_MA0912.1	15	1	+	9.103261580425086	8.325557011837077	TTGGGTCAATTAGATT
chr11	7452229	7452230	chr11:7452230:G:C	rs78973467	G	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr11	7465926	7465927	chr11:7465927:C:T	rs141544106	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	7603596	7603597	chr11:7603597:A:G	rs78867408	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr11	7879933	7879934	chr11:7879934:C:T	rs2361067	C	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr11	7938025	7938026	chr11:7938026:A:G	rs10839948	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr11	8195076	8195077	chr11:8195077:A:G	rs17227568	A	G	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	8222250	8222251	chr11:8222251:A:G	rs11041816	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	8597581	8597582	chr11:8597582:A:G	rs11042003	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	8757624	8757625	chr11:8757625:T:C	rs1079452	T	C	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	8767617	8767618	chr11:8767618:G:C	rs56210063	G	C	G	Hoxd3_MA0912.1	10	1	+	7.7536310369261585	2.947890160476249	ATGAGGCAATGACAGT
chr11	9232086	9232087	chr11:9232087:T:C	rs114947952	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	9314839	9314840	chr11:9314840:G:A	rs562079064	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	9512153	9512154	chr11:9512154:A:G	rs2290424	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	9525039	9525040	chr11:9525040:G:A	rs3763874	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	9772713	9772714	chr11:9772714:T:C	rs7925875	T	C	T	Hoxd3_MA0912.1	1	1	+	8.53428313072298	6.45022264318685	ATGAGGCAATGAACCT
chr11	9831364	9831365	chr11:9831365:T:C	rs140060667	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	10095840	10095841	chr11:10095841:G:A	rs11042624	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	10233009	10233010	chr11:10233010:T:C	rs4612801	T	C	C	Hoxd3_MA0912.1	8	1	-	7.0786149612181335	0.1900425016527701	CTGGATTCATGACCTC
chr11	10233740	10233741	chr11:10233741:A:G	rs537380339	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	10233927	10233928	chr11:10233928:C:T	rs77726078	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	10323086	10323087	chr11:10323087:A:G	rs183177692	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr11	10407536	10407537	chr11:10407537:A:T	rs72856128	A	T	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr11	10481443	10481444	chr11:10481444:C:T	rs73409954	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr11	10848424	10848425	chr11:10848425:A:G	rs79600251	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	10899964	10899965	chr11:10899965:A:G	rs7932891	A	G	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	11174049	11174050	chr11:11174050:C:G	rs2722758	C	G	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	11379962	11379963	chr11:11379963:A:G	rs11021825	A	G	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	11429426	11429427	chr11:11429427:C:T	rs56340322	C	T	C	Hoxd3_MA0912.1	2	1	-	8.697012507825958	7.247177463668921	GTGGAGTAATTAAAGC
chr11	11532915	11532916	chr11:11532916:A:T	rs11021909	A	T	A	Hoxd3_MA0912.1	10	1	-	8.349784045379938	1.57010080274951	TCTAGTTAATTACCTG
chr11	11568271	11568272	chr11:11568272:C:T	rs77877570	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	11588842	11588843	chr11:11588843:T:C	rs55947125	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	11995613	11995614	chr11:11995614:C:T	rs2035933	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr11	12051278	12051279	chr11:12051279:C:T	rs12798137	C	T	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr11	12085923	12085924	chr11:12085924:A:G	rs9665967	A	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	12122246	12122247	chr11:12122247:C:T	rs61875173	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	12277014	12277015	chr11:12277015:G:A	rs1125910	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	12393956	12393957	chr11:12393957:G:T	rs61875437	G	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	12482662	12482663	chr11:12482663:G:A	rs10831831	G	A	a	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr11	12989427	12989428	chr11:12989428:A:G	rs61878848	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr11	12989455	12989456	chr11:12989456:C:A	rs61878849	C	A	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr11	13316280	13316281	chr11:13316281:G:A	rs2166693	G	A	A	Hoxd3_MA0912.1	11	1	+	8.633875319151493	10.419801267332486	CTGAGGTCATTGCCTT
chr11	13335635	13335636	chr11:13335636:G:A	rs10832027	G	A	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	13385361	13385362	chr11:13385362:C:T	rs1447299	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	14044938	14044939	chr11:14044939:G:A	rs10832169	G	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	14092212	14092213	chr11:14092213:T:C	rs7116296	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	15175956	15175957	chr11:15175957:C:T	rs202203397	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr11	15320077	15320078	chr11:15320078:C:G	rs9645645	C	G	C	Hoxd3_MA0912.1	0	1	+	7.449527524866623	5.465151094983513	CTGAGCCAATTGGAGT
chr11	15731055	15731056	chr11:15731056:G:A	rs116262006	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	15929156	15929157	chr11:15929157:G:C	rs2615014	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	16148832	16148833	chr11:16148833:T:C	rs568466538	T	C	T	Hoxd3_MA0912.1	9	1	+	8.913238093463551	2.0246656338981897	CTCAATTAATTGCCCT
chr11	16302902	16302903	chr11:16302903:G:T	rs11023907	G	T	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	16365871	16365872	chr11:16365872:T:C	rs770105292	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	16410410	16410411	chr11:16410411:C:T	rs17554835	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr11	16454183	16454184	chr11:16454184:G:A	rs1393927	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	16611234	16611235	chr11:16611235:G:C	rs145162118	G	C	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr11	16776110	16776111	chr11:16776111:T:C	rs11024040	T	C	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	16987057	16987058	chr11:16987058:T:C	rs11024102	T	C	T	Hoxd3_MA0912.1	8	1	-	9.941988703158545	3.0534162435931833	TTGGGGCAATTAATTT
chr11	17019446	17019447	chr11:17019447:A:G	rs78014321	A	G	A	Hoxd3_MA0912.1	9	1	-	9.687916561199861	2.7993441016344978	CTGAGATAATTAGGCT
chr11	17686694	17686695	chr11:17686695:T:C	rs4141260	T	C	C	Hoxd3_MA0912.1	11	1	-	9.468488179172041	7.682562230991049	GTGAGATAATTACTGT
chr11	17808645	17808646	chr11:17808646:C:T	rs76120212	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr11	17965147	17965148	chr11:17965148:T:C	rs150218391	T	C	T	Hoxd3_MA0912.1	8	1	-	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr11	18255550	18255551	chr11:18255551:C:T	rs12285016	C	T	c	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	18778737	18778738	chr11:18778738:T:G	rs7129580	T	G	T	Hoxd3_MA0912.1	3	1	+	8.373421419989986	8.823660115083253	ATGTGCCAATTAAACC
chr11	18885063	18885064	chr11:18885064:C:A	rs11024865	C	A	-	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	19056474	19056475	chr11:19056475:T:C	rs10833050	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	19056505	19056506	chr11:19056506:G:A	rs10766524	G	A	G	Hoxd3_MA0912.1	14	1	+	10.775695065079743	9.83172973531561	ATGTGGTAATTACCGC
chr11	19267840	19267841	chr11:19267841:G:T	rs4757780	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	19499172	19499173	chr11:19499173:A:G	rs2403495	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	19510271	19510272	chr11:19510272:A:G	rs11025162	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	19735501	19735502	chr11:19735502:T:C	rs1035700	T	C	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	19952221	19952222	chr11:19952222:G:A	rs7131051	G	A	G	Hoxd3_MA0912.1	2	1	+	8.65808158686442	7.20824654270738	TTGAGGCAATTGATGT
chr11	19985460	19985461	chr11:19985461:T:C	rs2439875	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr11	20028312	20028313	chr11:20028313:A:G	rs4757880	A	G	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr11	20038582	20038583	chr11:20038583:C:T	rs59908244	C	T	C	Hoxd3_MA0912.1	10	1	-	7.253641071570447	2.4479001951205386	CAGGAGTAATGGCCCT
chr11	20038600	20038601	chr11:20038601:G:A	rs7126277	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	20070401	20070402	chr11:20070402:G:A	rs559750777	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr11	20070803	20070804	chr11:20070804:T:C	rs11825438	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr11	20070849	20070850	chr11:20070850:T:C	rs11025369	T	C	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr11	20563880	20563881	chr11:20563881:C:G	rs72942355	C	G	C	Hoxd3_MA0912.1	13	1	+	8.08028260072225	6.502204690009165	CTCAGGTCATTACCAT
chr11	20563901	20563902	chr11:20563902:A:T	rs72942359	A	T	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	21028326	21028327	chr11:21028327:G:C	rs1516769	G	C	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	21028331	21028332	chr11:21028332:G:T	rs1516768	G	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	21583115	21583116	chr11:21583116:T:C	rs16908227	T	C	T	Hoxd3_MA0912.1	1	1	+	9.314449397045296	7.230388909509166	ATGGTTCAATTACACT
chr11	21750613	21750614	chr11:21750614:G:C	rs58743490	G	C	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr11	22497504	22497505	chr11:22497505:G:C	rs1028068	G	C	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	22730330	22730331	chr11:22730331:C:T	rs147250499	C	T	C	Hoxd3_MA0912.1	5	1	+	9.350276584670969	9.667598026557377	TTGGACCAATTAGCCT
chr11	23499448	23499449	chr11:23499449:T:C	rs4923106	T	C	C	Hoxd3_MA0912.1	8	1	-	9.43147206473488	2.5428996051695183	TTGAGCCAATTACTGG
chr11	23553368	23553369	chr11:23553369:A:T	rs11027311	A	T	A	Hoxd3_MA0912.1	3	1	+	8.690742861876394	8.126406415744103	ATGATTCAATTACCTC
chr11	23574435	23574436	chr11:23574436:G:A	rs10834146	G	A	A	Hoxd3_MA0912.1	15	1	+	10.410117151374765	9.569118524415549	TTGCTTTAATTACCCG
chr11	24029435	24029436	chr11:24029436:T:A	rs79023445	T	A	T	Hoxd3_MA0912.1	8	1	-	7.392330182971761	2.901652996204767	CTGTGTCAATTGCTGC
chr11	24226747	24226748	chr11:24226748:G:C	rs7941141	G	C	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	24474958	24474959	chr11:24474959:C:T	rs9971537	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	24580510	24580511	chr11:24580511:G:A	rs10834396	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	25065685	25065686	chr11:25065686:T:G	rs1992731	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr11	25383333	25383334	chr11:25383334:A:C	rs10834672	A	C	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	25424338	25424339	chr11:25424339:T:G	chr11:25424339:T:G	T	G	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	25441431	25441432	chr11:25441432:A:G	rs10834687	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr11	26407968	26407969	chr11:26407969:T:C	rs1179544171	T	C	T	Hoxd3_MA0912.1	7	1	-	10.089484099330692	3.3098008567002646	TTGAATTAATTAAAGA
chr11	26478872	26478873	chr11:26478873:T:A	rs2131697	T	A	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	26700975	26700976	chr11:26700976:G:A	rs4477399	G	A	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	26951333	26951334	chr11:26951334:C:G	rs12281076	C	G	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	27084713	27084714	chr11:27084714:C:T	rs73430394	C	T	C	Hoxd3_MA0912.1	5	1	+	7.653095838958757	7.970417280845165	CTGTGCTCATGAATCT
chr11	27184078	27184079	chr11:27184079:T:C	rs532901519	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr11	27184093	27184094	chr11:27184094:A:T	rs76472113	A	T	A	Hoxd3_MA0912.1	3	1	+	11.24129542159221	10.676958975459918	TTGAGTTAATTACCAC
chr11	27255682	27255683	chr11:27255683:G:C	rs560051581	G	C	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	27255708	27255709	chr11:27255709:G:A	rs140363398	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr11	27349040	27349041	chr11:27349041:T:C	rs2291022	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr11	27395823	27395824	chr11:27395824:A:C	chr11:27395824:A:C	A	C	A	Hoxd3_MA0912.1	4	1	-	6.765097933950259	7.3693346624626335	CGGGTGCAATTACTGG
chr11	27430166	27430167	chr11:27430167:C:T	rs72889542	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	27695300	27695301	chr11:27695301:T:C	rs72881244	T	C	T	Hoxd3_MA0912.1	0	1	+	9.187530323074554	9.135024825696624	TAGTTGTAATTAAACG
chr11	27926255	27926256	chr11:27926256:G:A	rs527950974	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	28465183	28465184	chr11:28465184:C:T	rs111380682	C	T	C	Hoxd3_MA0912.1	14	1	-	8.353221053325296	7.409255723561161	AAGTGGTCATTACCGT
chr11	28539915	28539916	chr11:28539916:C:A	rs11030369	C	A	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	28658595	28658596	chr11:28658596:T:C	rs2356013	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	28738733	28738734	chr11:28738734:A:G	rs11030422	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	29023422	29023423	chr11:29023423:A:G	rs11030552	A	G	A	Hoxd3_MA0912.1	13	1	+	10.070601494942947	9.096760312742239	ATGGAATAATTAAAGT
chr11	29159814	29159815	chr11:29159815:G:A	rs189123258	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr11	29293770	29293771	chr11:29293771:G:A	rs78602573	G	A	G	Hoxd3_MA0912.1	13	1	-	10.27343268315174	9.669195954639365	TTGAACTAATTACCAG
chr11	29553497	29553498	chr11:29553498:G:A	rs717900	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr11	29915629	29915630	chr11:29915630:A:C	rs144135102	A	C	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr11	30582578	30582579	chr11:30582579:C:G	rs540261286	C	G	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	30639373	30639374	chr11:30639374:T:C	rs374539	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	30695252	30695253	chr11:30695253:C:A	rs16921142	C	A	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr11	30760030	30760031	chr11:30760031:T:C	rs7115201	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr11	30775018	30775019	chr11:30775019:A:G	rs1400914182	A	G	A	Hoxd3_MA0912.1	6	1	-	9.69089850394594	7.904972555764946	TTCAGTTAATTAACCA
chr11	31236233	31236234	chr11:31236234:C:G	rs71487990	C	G	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	31986134	31986135	chr11:31986135:T:A	rs224686	T	A	T	Hoxd3_MA0912.1	9	1	+	7.9719755511218455	3.4812983643548527	CAGAGGCAATGAACCT
chr11	32031460	32031461	chr11:32031461:A:T	rs1002229	A	T	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	32671754	32671755	chr11:32671755:C:T	rs7129723	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	32717782	32717783	chr11:32717783:A:T	rs138920473	A	T	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr11	33438264	33438265	chr11:33438265:A:G	rs2615907	A	G	G	Hoxd3_MA0912.1	5	1	-	9.354349679425379	9.037028237538971	ATGGGTCAATTAATTT
chr11	33488641	33488642	chr11:33488642:A:G	rs137856520	A	G	A	Hoxd3_MA0912.1	12	1	+	9.068441097799768	8.100918866860738	AAAGGTTAATTAACTT
chr11	33631017	33631018	chr11:33631018:A:G	rs77506057	A	G	A	Hoxd3_MA0912.1	8	1	+	8.069538873019203	1.1809664134538402	CTGTGGCAATGAACTT
chr11	33733806	33733807	chr11:33733807:G:C	rs1738546	G	C	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr11	33733808	33733809	chr11:33733809:G:T	rs1718066	G	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr11	33753516	33753517	chr11:33753517:C:G	rs114523687	C	G	C	Hoxd3_MA0912.1	2	1	-	8.445348985470655	6.661874567776708	CTGTGCTCATTGCCCT
chr11	33896046	33896047	chr11:33896047:A:G	rs750780	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr11	33904427	33904428	chr11:33904428:T:C	rs7941248	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr11	34053831	34053832	chr11:34053832:T:C	rs149851408	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr11	34344237	34344238	chr11:34344238:T:G	rs78072691	T	G	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	34603691	34603692	chr11:34603692:C:T	rs286947	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	34843469	34843470	chr11:34843470:A:G	rs1509660	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	34927568	34927569	chr11:34927569:T:C	rs2915197	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	35108463	35108464	chr11:35108464:C:A	rs535643	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	35247406	35247407	chr11:35247407:A:C	rs10488813	A	C	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	35249871	35249872	chr11:35249872:G:A	rs10836356	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	35319469	35319470	chr11:35319470:A:T	rs4110478	A	T	A	Hoxd3_MA0912.1	5	1	+	9.70784310553701	10.561201590535905	TTGAGATCATTAATCT
chr11	35393098	35393099	chr11:35393099:T:G	rs1570226	T	G	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr11	35553946	35553947	chr11:35553947:G:A	rs59100957	G	A	A	Hoxd3_MA0912.1	6	1	-	8.875196100802821	10.661122048983815	TTGAGGCAATTAGTCC
chr11	35839478	35839479	chr11:35839479:T:C	rs1408154	T	C	T	Hoxd3_MA0912.1	8	1	-	8.846386111342452	1.9578136517770914	CTGTTCTCATTACAGT
chr11	36057390	36057391	chr11:36057391:T:C	rs11033397	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr11	36274389	36274390	chr11:36274390:C:A	rs527931962	C	A	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr11	36329408	36329409	chr11:36329409:T:C	rs75051716	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr11	36413363	36413364	chr11:36413364:A:C	rs34096374	A	C	C	Hoxd3_MA0912.1	11	1	+	7.841622172639594	1.096986003227265	CTGATGTCATGACCTT
chr11	36831978	36831979	chr11:36831979:T:C	rs10836619	T	C	T	Hoxd3_MA0912.1	3	1	+	8.887513279552904	8.15083205697323	TTGTTGTAATTGCTTT
chr11	37108351	37108352	chr11:37108352:A:G	rs334963	A	G	A	Hoxd3_MA0912.1	0	1	+	8.615088945465509	7.294641150143205	ATGTAATAATTGCCCT
chr11	37500500	37500501	chr11:37500501:T:C	rs1003254727	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	37504843	37504844	chr11:37504844:C:T	rs1545342	C	T	T	Hoxd3_MA0912.1	5	1	+	8.525121167183956	8.842442609070364	TTGGACTCATTAATGG
chr11	38014721	38014722	chr11:38014722:C:T	rs76114525	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	38461131	38461132	chr11:38461132:G:A	rs1203353374	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	38582929	38582930	chr11:38582930:T:C	rs10837017	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	38619730	38619731	chr11:38619731:A:G	rs10501204	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	38900234	38900235	chr11:38900235:C:T	rs76774762	C	T	C	Hoxd3_MA0912.1	2	1	-	8.206121998471382	6.7562869543143425	CAGGGTTAATTGAGGT
chr11	39139849	39139850	chr11:39139850:C:T	rs61887581	C	T	C	Hoxd3_MA0912.1	15	1	-	9.246774674734421	8.405776047775205	TTGGATCAATTAACTG
chr11	39803977	39803978	chr11:39803978:C:A	rs722460	C	A	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr11	39818486	39818487	chr11:39818487:T:A	rs16933975	T	A	T	Hoxd3_MA0912.1	4	1	-	8.072044788812411	8.072044788812411	CAGGAGTCATTAGCCT
chr11	40070410	40070411	chr11:40070411:G:A	rs11035670	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr11	40125428	40125429	chr11:40125429:C:A	rs61911790	C	A	C	Hoxd3_MA0912.1	13	1	+	9.730991524569966	9.126754796057591	CTGAATTAATGAACCC
chr11	40153006	40153007	chr11:40153007:C:A	rs10160712	C	A	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr11	40180053	40180054	chr11:40180054:T:A	rs4756582	T	A	T	Hoxd3_MA0912.1	7	1	-	8.856154967745764	2.076471725115336	TTGGTGTAATTATCTA
chr11	40183615	40183616	chr11:40183616:T:A	rs72889323	T	A	t	Hoxd3_MA0912.1	11	1	-	8.388893782105784	4.051202721011743	ATGAGATCATTATCCT
chr11	41100294	41100295	chr11:41100295:G:A	rs1960778	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	41294804	41294805	chr11:41294805:G:A	rs7943371	G	A	G	Hoxd3_MA0912.1	4	1	-	9.058942694395986	10.032783876596694	ATGACTCAATTACCCT
chr11	42498922	42498923	chr11:42498923:T:A	rs1462663	T	A	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	42873656	42873657	chr11:42873657:T:G	rs111369914	T	G	t	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr11	42873676	42873677	chr11:42873677:C:T	rs144033096	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	42926238	42926239	chr11:42926239:C:T	rs34675564	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr11	42973099	42973100	chr11:42973100:G:A	rs4328201	G	A	G	Hoxd3_MA0912.1	14	1	-	9.878926068054879	9.314589621922588	ATGAAGTAATTATACT
chr11	43544667	43544668	chr11:43544668:C:A	rs10838126	C	A	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	44005758	44005759	chr11:44005759:A:G	rs10838214	A	G	A	Hoxd3_MA0912.1	1	1	-	8.737636338614069	6.653575851077939	ATAGTGTAATTACCTG
chr11	44034143	44034144	chr11:44034144:C:T	rs10838226	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr11	44034684	44034685	chr11:44034685:T:C	rs2188705	T	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr11	44486978	44486979	chr11:44486979:A:G	rs10742711	A	G	G	Hoxd3_MA0912.1	15	1	-	8.800422050802204	8.022717482214196	CTGTTTTAATGAGCGT
chr11	44573995	44573996	chr11:44573996:T:C	rs186010347	T	C	T	Hoxd3_MA0912.1	8	1	-	7.549003540363949	0.6604310807985861	CAGAAGTAATGACAGG
chr11	44580787	44580788	chr11:44580788:G:A	rs61881364	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr11	44637818	44637819	chr11:44637819:T:C	rs61878782	T	C	T	Hoxd3_MA0912.1	1	1	+	10.541419537607027	8.457359050070897	ATTTGTTAATTACCCT
chr11	44652683	44652684	chr11:44652684:C:T	rs10769065	C	T	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	44755181	44755182	chr11:44755182:C:T	rs10769076	C	T	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr11	44779453	44779454	chr11:44779454:C:G	rs17778846	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	44862509	44862510	chr11:44862510:C:T	rs1014907958	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr11	44862511	44862512	chr11:44862512:C:A	rs567119887	C	A	C	Hoxd3_MA0912.1	0	1	+	7.464734797714481	6.800806163153675	CTGGGTCAATGAGTGT
chr11	45022835	45022836	chr11:45022836:T:C	rs1386667	T	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr11	45026976	45026977	chr11:45026977:A:T	rs1028188194	A	T	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr11	45105231	45105232	chr11:45105232:T:C	rs875973	T	C	C	Hoxd3_MA0912.1	10	1	+	7.285482486750255	0.505799244119828	ATGGCCTAATTGCCTC
chr11	45144875	45144876	chr11:45144876:A:T	chr11:45144876:A:T	A	T	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	45298937	45298938	chr11:45298938:T:C	chr11:45298938:T:C	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr11	45414296	45414297	chr11:45414297:G:C	rs974312	G	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	45414332	45414333	chr11:45414333:C:T	rs369847706	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr11	45482704	45482705	chr11:45482705:T:C	rs7118034	T	C	t	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	45737176	45737177	chr11:45737177:G:A	rs557302810	G	A	G	Hoxd3_MA0912.1	14	1	+	10.909262622775294	9.965297293011162	ATGATGTAATTAAAGT
chr11	45840801	45840802	chr11:45840802:A:G	rs6485645	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr11	46276338	46276339	chr11:46276339:G:A	rs550284303	G	A	G	Hoxd3_MA0912.1	15	1	+	11.341307880822391	10.500309253863175	CTGAGCTAATTAAACG
chr11	46662973	46662974	chr11:46662974:A:T	rs61884292	A	T	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr11	46936256	46936257	chr11:46936257:G:A	rs7945558	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	47238116	47238117	chr11:47238117:T:C	rs326222	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	47247817	47247818	chr11:47247818:C:T	rs58528246	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	47354001	47354002	chr11:47354002:G:A	rs7112154	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	47641496	47641497	chr11:47641497:A:G	rs10838738	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	47947005	47947006	chr11:47947006:A:G	rs117506841	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	47998990	47998991	chr11:47998991:A:G	rs1681625	A	G	A	Hoxd3_MA0912.1	14	1	+	7.889304736554365	8.833270066318498	CTGAGCTCATTGCCAT
chr11	49750682	49750683	chr11:49750683:G:A	rs7481230	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	56089831	56089832	chr11:56089832:C:G	rs17530416	C	G	C	Hoxd3_MA0912.1	2	1	-	8.220841062033275	6.437366644339327	TAGTGTTAATTGCCTC
chr11	56811095	56811096	chr11:56811096:T:C	rs56076539	T	C	T	Hoxd3_MA0912.1	15	1	+	8.887513279552904	8.109808710964895	TTGTTGTAATTGCTTT
chr11	56879330	56879331	chr11:56879331:G:T	rs66501822	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	57269650	57269651	chr11:57269651:A:G	rs184285533	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr11	57384928	57384929	chr11:57384929:G:A	rs61888913	G	A	G	Hoxd3_MA0912.1	7	1	-	7.6191911899060205	2.8134503134561113	CTGATCTCATTAGAGG
chr11	57490605	57490606	chr11:57490606:C:T	rs61886990	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	57713863	57713864	chr11:57713864:C:G	rs523985	C	G	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	58561478	58561479	chr11:58561479:A:G	rs2515348	A	G	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	58732059	58732060	chr11:58732060:C:T	rs57742826	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr11	59161207	59161208	chr11:59161208:T:C	rs2154628	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	59681406	59681407	chr11:59681407:A:C	rs73486997	A	C	C	Hoxd3_MA0912.1	7	1	+	9.553862224907427	7.57991985872691	TAAAAGTAATTACCGT
chr11	60101616	60101617	chr11:60101617:A:G	rs580817	A	G	.	Hoxd3_MA0912.1	1	1	-	10.613161284403498	8.529100796867368	TTGATCTAATTACTGG
chr11	60327210	60327211	chr11:60327211:T:G	rs11230264	T	G	G	Hoxd3_MA0912.1	6	1	+	8.567795084977192	1.8231589155648638	TGGATGTAATTAAGGT
chr11	60411136	60411137	chr11:60411137:T:C	rs7106239	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	60431572	60431573	chr11:60431573:G:A	rs10897061	G	A	g	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	60864667	60864668	chr11:60864668:C:T	rs530880	C	T	C	Hoxd3_MA0912.1	6	1	+	7.995733941586382	9.781659889767376	CTGAAGCAATTAGAGG
chr11	61057681	61057682	chr11:61057682:G:C	rs60282370	G	C	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr11	61057690	61057691	chr11:61057691:C:T	rs481231	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr11	61094178	61094179	chr11:61094179:C:G	rs538346	C	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr11	61145367	61145368	chr11:61145368:C:T	rs612822	C	T	C	Hoxd3_MA0912.1	14	1	-	8.525626772847675	7.58166144308354	ATGGGATAATTGGCGT
chr11	61153413	61153414	chr11:61153414:T:C	rs115908258	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr11	61162565	61162566	chr11:61162566:A:G	rs663292	A	G	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr11	61536330	61536331	chr11:61536331:C:T	rs1794072	C	T	C	Hoxd3_MA0912.1	15	1	-	9.060658604347557	8.219659977388341	ATGTGTTAATGAACCG
chr11	61696802	61696803	chr11:61696803:C:G	rs198454	C	G	G	Hoxd3_MA0912.1	13	1	+	7.8427891616520835	6.2647112509389995	GTGTTGCAATTACCGT
chr11	61708295	61708296	chr11:61708296:C:T	rs530071658	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	61797314	61797315	chr11:61797315:C:T	rs146836633	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr11	61978480	61978481	chr11:61978481:G:A	rs2028062	G	A	A	Hoxd3_MA0912.1	5	1	-	8.28427485159011	8.601596293476518	TTGCTCTAATTAGCCA
chr11	62705758	62705759	chr11:62705759:G:C	rs191835830	G	C	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr11	62806784	62806785	chr11:62806785:C:A	rs181532360	C	A	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	63127985	63127986	chr11:63127986:G:T	rs1939783	G	T	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	63397993	63397994	chr11:63397994:C:A	rs61928012	C	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	63511148	63511149	chr11:63511149:C:G	rs2239679	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	63511153	63511154	chr11:63511154:G:A	rs78346459	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	64097610	64097611	chr11:64097611:G:T	rs570340291	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	64476275	64476276	chr11:64476276:A:G	rs112762856	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	64760686	64760687	chr11:64760687:A:G	rs143460923	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	65260814	65260815	chr11:65260815:G:C	rs192874209	G	C	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr11	65277878	65277879	chr11:65277879:G:C	rs138015744	G	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr11	65277900	65277901	chr11:65277901:T:G	chr11:65277901:T:G	T	G	T	Hoxd3_MA0912.1	6	1	+	10.293439888955543	3.5488037195432147	TTGAGATAATTAATTG
chr11	65383977	65383978	chr11:65383978:A:G	rs681309	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	65494685	65494686	chr11:65494686:G:A	rs116034872	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	65556804	65556805	chr11:65556805:C:T	rs11227223	C	T	C	Hoxd3_MA0912.1	4	1	+	11.077378084212354	12.051219266413062	CTGGCCTAATTACCCT
chr11	65639108	65639109	chr11:65639109:T:C	rs373738285	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr11	65654004	65654005	chr11:65654005:G:A	rs9725	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr11	66257324	66257325	chr11:66257325:G:A	rs76627914	G	A	g	Hoxd3_MA0912.1	32	0	-	0	0	.
chr11	66257336	66257337	chr11:66257337:G:A	rs370317012	G	A	g	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	66257343	66257344	chr11:66257344:G:A	rs150341182	G	A	g	Hoxd3_MA0912.1	13	1	-	8.64857267631804	8.044335947805667	CTGGGTTCATTGACTT
chr11	66318438	66318439	chr11:66318439:T:G	rs188678580	T	G	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	66638583	66638584	chr11:66638584:C:G	chr11:66638584:C:G	C	G	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	67044866	67044867	chr11:67044867:A:G	rs11227668	A	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr11	67399227	67399228	chr11:67399228:A:C	rs909071446	A	C	A	Hoxd3_MA0912.1	7	1	+	6.800692542425171	4.826750176244651	CTTGGCCAATGAACCC
chr11	67538547	67538548	chr11:67538548:C:T	rs72936837	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	67545560	67545561	chr11:67545561:G:A	rs75261046	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	67704673	67704674	chr11:67704674:T:C	rs4930217	T	C	T	Hoxd3_MA0912.1	6	1	+	8.379268751296356	6.5933428031153625	TGGACCTAATTACAGT
chr11	68143160	68143161	chr11:68143161:A:G	rs2511472	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	68179004	68179005	chr11:68179005:T:C	rs7122250	T	C	C	Hoxd3_MA0912.1	5	1	+	8.220443123420798	7.903121681534392	TAGGGTTAATGAATGG
chr11	68212042	68212043	chr11:68212043:T:C	rs11228163	T	C	T	Hoxd3_MA0912.1	5	1	-	9.183620116953866	9.90818349374719	CTGAAATAATTACAGA
chr11	68410239	68410240	chr11:68410240:G:A	rs576118	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr11	68410259	68410260	chr11:68410260:C:T	rs667126	C	T	C	Hoxd3_MA0912.1	4	1	+	8.438537571812665	9.412378754013373	CTGACGTCATTAGCCT
chr11	68414906	68414907	chr11:68414907:T:C	rs923346	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	68648733	68648734	chr11:68648734:T:A	rs112398739	T	A	T	Hoxd3_MA0912.1	15	1	+	10.065553113359794	8.400545349770884	TTGCTTTAATTAATTT
chr11	68950446	68950447	chr11:68950447:T:C	chr11:68950447:T:C	T	C	T	Hoxd3_MA0912.1	8	1	-	6.531838985650401	-0.356733473914961	CTGGGCCAATTTCCCT
chr11	69042134	69042135	chr11:69042135:A:G	rs940572241	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	69256205	69256206	chr11:69256206:C:G	rs61881142	C	G	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr11	69336247	69336248	chr11:69336248:C:T	rs116449267	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr11	69423354	69423355	chr11:69423355:C:T	rs11263654	C	T	C	Hoxd3_MA0912.1	15	1	-	9.022837604038225	8.181838977079009	TGGATTTAATTAATCG
chr11	69429307	69429308	chr11:69429308:A:T	rs4390366	A	T	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr11	69700927	69700928	chr11:69700928:G:A	rs79825511	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr11	69741701	69741702	chr11:69741702:G:A	rs10796838	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	69872398	69872399	chr11:69872399:G:T	rs67201089	G	T	t	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	69885177	69885178	chr11:69885178:G:A	rs7124792	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	69889967	69889968	chr11:69889968:G:A	rs28456383	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	69889976	69889977	chr11:69889977:T:C	rs111831847	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	69960695	69960696	chr11:69960696:C:T	rs3867287	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	69962137	69962138	chr11:69962138:T:C	rs11237171	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	70164524	70164525	chr11:70164525:G:A	rs34911172	G	A	G	Hoxd3_MA0912.1	11	1	+	8.621317842707436	10.407243790888428	ATGGTGTAATTGCTTT
chr11	70210278	70210279	chr11:70210279:C:T	rs185054278	C	T	C	Hoxd3_MA0912.1	1	1	+	8.980883040671177	11.064943528207309	CCGTGATAATTAATCT
chr11	70578837	70578838	chr11:70578838:T:G	rs948194	T	G	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	70589037	70589038	chr11:70589038:C:T	rs10899215	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	70906736	70906737	chr11:70906737:G:A	rs924744	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	71104237	71104238	chr11:71104238:T:C	rs72957640	T	C	T	Hoxd3_MA0912.1	7	1	-	7.464939538938156	0.6852562963077273	CCAGGTTAATGAACCT
chr11	71131975	71131976	chr11:71131976:G:A	rs141533433	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	71394756	71394757	chr11:71394757:A:G	rs76495726	A	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	71558576	71558577	chr11:71558577:G:A	rs72964299	G	A	G	Hoxd3_MA0912.1	2	1	+	8.274433735210433	6.824598691053395	TAGCTGTAATTACAGG
chr11	72041559	72041560	chr11:72041560:C:G	chr11:72041560:C:G	C	G	C	Hoxd3_MA0912.1	15	1	-	9.014175265768946	9.060479833810632	CTGATCTAATTATCAG
chr11	72118793	72118794	chr11:72118794:C:T	rs61696370	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr11	72427111	72427112	chr11:72427112:T:C	rs77372056	T	C	t	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	72856121	72856122	chr11:72856122:A:C	rs12803589	A	C	A	Hoxd3_MA0912.1	1	1	-	10.437301293368858	8.353240805832728	TTTAATTAATTAATGT
chr11	72870248	72870249	chr11:72870249:T:C	rs10898887	T	C	T	Hoxd3_MA0912.1	0	1	+	9.266968877107121	9.21446337972919	TAGATCTAATTACAAT
chr11	72965653	72965654	chr11:72965654:T:C	rs10898893	T	C	T	Hoxd3_MA0912.1	15	1	+	10.406411064006948	9.628706495418939	CTTGGGTAATTACCAT
chr11	72986624	72986625	chr11:72986625:C:T	rs80096155	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	73057422	73057423	chr11:73057423:T:C	rs368461314	T	C	T	Hoxd3_MA0912.1	12	1	+	8.608489300880917	9.815241220885781	CTGTGGTAATTATGGG
chr11	74371680	74371681	chr11:74371681:A:G	rs60942292	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	74413332	74413333	chr11:74413333:A:G	rs654028	A	G	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	74731998	74731999	chr11:74731999:A:G	rs10899041	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	75144858	75144859	chr11:75144859:A:G	rs2712802	A	G	A	Hoxd3_MA0912.1	15	1	-	7.56510470324532	6.787400134657312	ATGAGCTAATGGCTGT
chr11	75408028	75408029	chr11:75408029:G:T	rs12269908	G	T	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	75510857	75510858	chr11:75510858:C:G	rs72989923	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	75594511	75594512	chr11:75594512:G:A	rs541993	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr11	76181273	76181274	chr11:76181274:G:A	rs12363352	G	A	G	Hoxd3_MA0912.1	15	1	-	7.8641292534480955	8.641833822036103	TAGATGTCATTACCTC
chr11	76256317	76256318	chr11:76256318:A:G	rs2927781	A	G	g	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr11	76595966	76595967	chr11:76595967:A:G	rs72934333	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	76631105	76631106	chr11:76631106:C:T	rs12361883	C	T	C	Hoxd3_MA0912.1	1	1	-	8.397201961418462	9.255026234792652	TGGGAGTAATTATACT
chr11	76793653	76793654	chr11:76793654:G:A	rs10899282	G	A	g	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr11	76877613	76877614	chr11:76877614:T:C	rs9666315	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	77190978	77190979	chr11:77190979:G:A	rs4944148	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr11	77313387	77313388	chr11:77313388:A:T	rs2100393	A	T	A	Hoxd3_MA0912.1	8	1	+	8.98519278012561	4.494515593358618	CAGATGTAATTAAGTT
chr11	77522965	77522966	chr11:77522966:A:G	rs2105803	A	G	A	Hoxd3_MA0912.1	1	1	-	7.863836165374217	5.779775677838085	CTGCATTAATTGGCTT
chr11	77993235	77993236	chr11:77993236:G:T	rs7127210	G	T	T	Hoxd3_MA0912.1	7	1	-	8.078458814326297	10.052401180506816	CTGCTGTCATTACCGG
chr11	78354912	78354913	chr11:78354913:T:G	rs4245459	T	G	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr11	78386792	78386793	chr11:78386793:G:T	rs147910438	G	T	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr11	78929900	78929901	chr11:78929901:A:G	rs78559858	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	78934250	78934251	chr11:78934251:T:C	rs535161	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr11	79089125	79089126	chr11:79089126:T:C	rs10793359	T	C	C	Hoxd3_MA0912.1	15	1	+	9.331523077404245	8.553818508816237	TTGAAACAATTACCTT
chr11	79122522	79122523	chr11:79122523:G:C	rs10899593	G	C	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr11	79154616	79154617	chr11:79154617:A:G	rs483089	A	G	A	Hoxd3_MA0912.1	7	1	+	8.442281328611331	1.6625980859809053	TTCAGGTAATTATGCT
chr11	79177219	79177220	chr11:79177220:T:C	rs575929	T	C	T	Hoxd3_MA0912.1	4	1	+	8.068681542754444	7.094840360553738	CTGTTCTCATTAAAGC
chr11	79633493	79633494	chr11:79633494:T:A	rs650299	T	A	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	79663017	79663018	chr11:79663018:T:A	rs1783435	T	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	79784156	79784157	chr11:79784157:T:C	rs17835798	T	C	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	80748711	80748712	chr11:80748712:T:C	rs11601312	T	C	T	Hoxd3_MA0912.1	12	1	-	9.059695430970608	8.092173200031578	TGTGGTTAATTAACTT
chr11	80805531	80805532	chr11:80805532:T:G	rs938159	T	G	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	80805538	80805539	chr11:80805539:C:T	rs938158	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	80866784	80866785	chr11:80866785:C:A	rs4944267	C	A	A	Hoxd3_MA0912.1	2	1	-	8.963109570578471	7.6459190010277265	ATGTTCTCATTAACCT
chr11	80912933	80912934	chr11:80912934:C:T	rs4945463	C	T	C	Hoxd3_MA0912.1	1	1	-	7.9527049392475675	8.810529212621757	TGGTGTTCATTACCTT
chr11	81029224	81029225	chr11:81029225:A:C	rs11232437	A	C	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	81236857	81236858	chr11:81236858:T:G	rs3019076	T	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	81261945	81261946	chr11:81261946:A:C	rs945226885	A	C	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr11	81506657	81506658	chr11:81506658:G:C	rs4644664	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	81853635	81853636	chr11:81853636:G:A	rs922135	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr11	81890357	81890358	chr11:81890358:A:C	rs4943857	A	C	A	Hoxd3_MA0912.1	3	1	-	8.969105203905816	9.419343898999083	ATGTGCTAATTAGTGG
chr11	82534065	82534066	chr11:82534066:C:T	rs1939642	C	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr11	82818695	82818696	chr11:82818696:G:A	rs57831409	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr11	82851443	82851444	chr11:82851444:C:T	rs10898038	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr11	83051923	83051924	chr11:83051924:G:A	rs150141233	G	A	g	Hoxd3_MA0912.1	31	0	+	0	0	.
chr11	83137751	83137752	chr11:83137752:G:A	rs145499672	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	83713781	83713782	chr11:83713782:T:C	rs34994208	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr11	83862906	83862907	chr11:83862907:C:G	rs1400309	C	G	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr11	83964504	83964505	chr11:83964505:C:A	rs1384758	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	84103447	84103448	chr11:84103448:C:A	rs80004183	C	A	C	Hoxd3_MA0912.1	3	1	-	7.9525362960775805	7.502297600984313	CTCGGTTAATTAGTCA
chr11	84127823	84127824	chr11:84127824:G:T	rs113779255	G	T	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr11	84384787	84384788	chr11:84384788:T:C	rs79900828	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	84555972	84555973	chr11:84555973:A:G	rs1367535	A	G	G	Hoxd3_MA0912.1	1	1	-	8.042163200663918	5.958102713127788	CTGAGCTCATTGGCCT
chr11	84801599	84801600	chr11:84801600:C:T	rs12271903	C	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	84812313	84812314	chr11:84812314:A:G	rs36004097	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr11	85756567	85756568	chr11:85756568:A:G	rs183822089	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	85837273	85837274	chr11:85837274:G:C	rs184994616	G	C	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	85939585	85939586	chr11:85939586:T:C	rs2508378	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	85939586	85939587	chr11:85939587:G:A	rs72949429	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr11	86183467	86183468	chr11:86183468:A:G	rs1043029047	A	G	A	Hoxd3_MA0912.1	12	1	+	8.167950999826346	7.200428768887315	TTGGTGTCATGAACGT
chr11	86383904	86383905	chr11:86383905:G:A	rs10898474	G	A	g	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	86519522	86519523	chr11:86519523:C:T	rs79302829	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr11	86623562	86623563	chr11:86623563:A:T	rs7937853	A	T	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr11	86695998	86695999	chr11:86695999:G:T	rs74773383	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	87016554	87016555	chr11:87016555:C:T	rs17149659	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	87175132	87175133	chr11:87175133:T:G	rs2512490	T	G	G	Hoxd3_MA0912.1	9	1	+	9.119849922847242	4.62917273608025	CTGGACTAATTATAAT
chr11	87306262	87306263	chr11:87306263:A:G	rs116957657	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr11	87352824	87352825	chr11:87352825:A:G	rs150190688	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	87895567	87895568	chr11:87895568:A:G	rs79185200	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr11	87975539	87975540	chr11:87975540:A:G	rs28375575	A	G	A	Hoxd3_MA0912.1	1	1	-	8.400141334919429	6.316080847383296	CTTGCATAATTACCCG
chr11	88210035	88210036	chr11:88210036:A:G	rs11018823	A	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	88237204	88237205	chr11:88237205:T:C	rs217092	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	88297762	88297763	chr11:88297763:G:A	rs217112	G	A	G	Hoxd3_MA0912.1	14	1	+	7.865827885567297	6.9218625558031635	CCAAGGTAATTAATGC
chr11	88310511	88310512	chr11:88310512:T:A	rs188064910	T	A	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	88554642	88554643	chr11:88554643:A:G	rs61901965	A	G	a	Hoxd3_MA0912.1	2	1	-	8.599058572459908	8.132774724316704	CATAGTTAATTAACAG
chr11	88712101	88712102	chr11:88712102:C:T	rs974337	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	89555144	89555145	chr11:89555145:T:C	rs2196501	T	C	.	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	90221054	90221055	chr11:90221055:A:G	rs11018924	A	G	a	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	90447582	90447583	chr11:90447583:G:A	rs10765316	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	90459650	90459651	chr11:90459651:A:T	rs493056	A	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	90836154	90836155	chr11:90836155:T:C	rs114825467	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr11	91173943	91173944	chr11:91173944:C:T	rs7484032	C	T	T	Hoxd3_MA0912.1	4	1	-	8.373421419989986	7.769184691477613	ATGAGCCAATTAAATC
chr11	91173957	91173958	chr11:91173958:G:A	rs112293493	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr11	91404173	91404174	chr11:91404174:A:G	rs7935254	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	92058178	92058179	chr11:92058179:T:G	rs1945853	T	G	T	Hoxd3_MA0912.1	8	1	-	10.520972466427095	6.030295279660102	TTAATTTAATTAACTT
chr11	92063307	92063308	chr11:92063308:G:A	rs1390769	G	A	g	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	92136818	92136819	chr11:92136819:C:A	rs79559244	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	92460407	92460408	chr11:92460408:C:T	rs146300877	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr11	93059699	93059700	chr11:93059700:A:T	rs7932966	A	T	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	93072803	93072804	chr11:93072804:G:A	rs678141	G	A	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	93079755	93079756	chr11:93079756:A:G	rs1508617	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr11	93221711	93221712	chr11:93221712:C:T	rs114868132	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	93368448	93368449	chr11:93368449:A:G	rs12286123	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr11	93407891	93407892	chr11:93407892:C:T	rs3020076	C	T	T	Hoxd3_MA0912.1	2	1	-	7.58718791279246	6.137352868635421	CAGAAGTAATTGCGGT
chr11	93495375	93495376	chr11:93495376:T:C	rs11603560	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr11	93624987	93624988	chr11:93624988:A:G	rs4612756	A	G	G	Hoxd3_MA0912.1	0	1	+	8.033029234159137	6.712581438836835	ATGCGGTAATTAGTTG
chr11	94002183	94002184	chr11:94002184:A:G	rs7127616	A	G	A	Hoxd3_MA0912.1	4	1	+	9.71580311053829	10.320039839050665	CTTGAGTAATTATCCT
chr11	94123967	94123968	chr11:94123968:A:G	rs4396251	A	G	C	Hoxd3_MA0912.1	1	1	-	10.971580237020719	8.88751974948459	ATGGTGTAATTACACT
chr11	94365649	94365650	chr11:94365650:G:A	rs4360663	G	A	g	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	94434090	94434091	chr11:94434091:G:A	rs518276	G	A	A	Hoxd3_MA0912.1	14	1	-	7.6576257226510585	7.093289276518768	CAGGTGTAATGAAACC
chr11	94663354	94663355	chr11:94663355:A:C	rs7104326	A	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr11	95219878	95219879	chr11:95219879:A:G	rs1054522	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr11	95263462	95263463	chr11:95263463:A:G	rs1471297109	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr11	95290803	95290804	chr11:95290804:A:G	rs2446289	A	G	G	Hoxd3_MA0912.1	0	1	+	8.647244749798805	7.326796954476505	ATGGGCCAATTACAGC
chr11	95444740	95444741	chr11:95444741:A:C	rs10430828	A	C	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	95524732	95524733	chr11:95524733:G:A	rs2212959	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr11	95543415	95543416	chr11:95543416:T:C	rs11021201	T	C	C	Hoxd3_MA0912.1	8	1	-	8.079772685040936	1.1912002254755747	CTCAGCTAATTGACAT
chr11	95768697	95768698	chr11:95768698:T:C	rs11021308	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	95768733	95768734	chr11:95768734:C:A	rs11021309	C	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr11	95829834	95829835	chr11:95829835:A:G	rs4753702	A	G	A	Hoxd3_MA0912.1	10	1	-	8.457954200468503	1.6782709578380757	TTGATCCCATTACCCT
chr11	95991918	95991919	chr11:95991919:G:A	rs79453425	G	A	G	Hoxd3_MA0912.1	3	1	+	9.83026189598666	9.944359647025683	CTGGGTTAATGACATT
chr11	95991930	95991931	chr11:95991931:T:C	rs16922803	T	C	T	Hoxd3_MA0912.1	15	1	+	9.83026189598666	9.05255732739865	CTGGGTTAATGACATT
chr11	96132375	96132376	chr11:96132376:T:C	rs7111263	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	96238155	96238156	chr11:96238156:T:C	rs473162	T	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr11	96447694	96447695	chr11:96447695:T:G	rs56367041	T	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	96567645	96567646	chr11:96567646:T:C	rs75771249	T	C	T	Hoxd3_MA0912.1	5	1	+	8.74336687773627	8.426045435849863	ATGGCTTAATTATTGT
chr11	96781218	96781219	chr11:96781219:A:C	rs12146648	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	97167459	97167460	chr11:97167460:A:G	rs2040331	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr11	97855677	97855678	chr11:97855678:C:T	rs2597595	C	T	C	Hoxd3_MA0912.1	0	1	-	8.678497253767967	9.99894504909027	GTGGGCTAATTACATG
chr11	98001055	98001056	chr11:98001056:T:C	rs11213574	T	C	T	Hoxd3_MA0912.1	10	1	+	9.299382964378392	2.5196997217479633	TTAAGTTAATTGCACT
chr11	98495277	98495278	chr11:98495278:A:G	rs10790089	A	G	G	Hoxd3_MA0912.1	10	1	-	7.697701284961381	0.9180180423309541	TGGGAATAATTGCCCT
chr11	98682641	98682642	chr11:98682642:C:T	rs116659424	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr11	98870641	98870642	chr11:98870642:A:G	rs4754556	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	98881702	98881703	chr11:98881703:A:C	rs1961370	A	C	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	99038396	99038397	chr11:99038397:T:C	rs6589857	T	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	99630346	99630347	chr11:99630347:A:G	rs138295762	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	99988428	99988429	chr11:99988429:C:A	rs7129985	C	A	c	Hoxd3_MA0912.1	32	0	+	0	0	.
chr11	100470169	100470170	chr11:100470170:G:T	rs75819052	G	T	G	Hoxd3_MA0912.1	3	1	+	7.553546665843624	7.103307970750357	CTGGGCTCATTGCCTC
chr11	100515543	100515544	chr11:100515544:T:C	rs12289202	T	C	T	Hoxd3_MA0912.1	8	1	-	8.654773645710137	1.7662011861447735	CTGATCCAATTACTAT
chr11	100520147	100520148	chr11:100520148:T:C	rs1216508	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	100640094	100640095	chr11:100640095:A:C	rs11224342	A	C	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	100684911	100684912	chr11:100684912:A:G	rs61908738	A	G	A	Hoxd3_MA0912.1	13	1	+	9.508293915341813	8.534452733141105	CAGGTATAATTAAAGT
chr11	100789584	100789585	chr11:100789585:T:C	rs569306751	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	100834516	100834517	chr11:100834517:C:G	rs648435	C	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	100834542	100834543	chr11:100834543:T:A	rs648388	T	A	A	Hoxd3_MA0912.1	8	1	-	7.863836165374217	3.373158978607223	CTGCATTAATTGGCTT
chr11	100942532	100942533	chr11:100942533:T:G	rs10501968	T	G	G	Hoxd3_MA0912.1	0	1	+	8.647502800344013	6.610620873082973	TTGAATTAATTAGGTC
chr11	100942564	100942565	chr11:100942565:G:A	rs12419257	G	A	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	100942611	100942612	chr11:100942612:A:G	rs60612076	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	100978803	100978804	chr11:100978804:G:A	rs80116157	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	101482760	101482761	chr11:101482761:C:T	rs11224785	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr11	101706345	101706346	chr11:101706346:T:C	rs34377172	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr11	102138632	102138633	chr11:102138633:G:A	rs2019070	G	A	A	Hoxd3_MA0912.1	3	1	+	9.468998613338787	9.58309636437781	TTCGTTTAATTACTTT
chr11	102138980	102138981	chr11:102138981:T:G	chr11:102138981:T:G	T	G	T	Hoxd3_MA0912.1	8	1	-	11.858610107157771	7.367932920390778	ATGTGTTAATTACCCT
chr11	102318410	102318411	chr11:102318411:T:C	rs183208263	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr11	102348007	102348008	chr11:102348008:T:C	rs549154749	T	C	t	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr11	102354396	102354397	chr11:102354397:C:A	rs61895375	C	A	c	Hoxd3_MA0912.1	29	0	+	0	0	.
chr11	102367364	102367365	chr11:102367365:T:C	rs35457182	T	C	t	Hoxd3_MA0912.1	31	0	+	0	0	.
chr11	102474375	102474376	chr11:102474376:C:T	rs683742	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	102474376	102474377	chr11:102474377:A:G	rs479843	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr11	102527997	102527998	chr11:102527998:G:A	rs17881703	G	A	G	Hoxd3_MA0912.1	12	1	-	9.65054030106925	8.443788381064387	ATAGATTAATTACTCT
chr11	102639845	102639846	chr11:102639846:A:T	rs7121655	A	T	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	102725010	102725011	chr11:102725011:A:G	rs116933011	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr11	102851490	102851491	chr11:102851491:G:A	rs115796449	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	103112838	103112839	chr11:103112839:G:C	rs2513998	G	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr11	103358298	103358299	chr11:103358299:T:C	rs2566913	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr11	103368441	103368442	chr11:103368442:G:T	rs72981412	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr11	103368477	103368478	chr11:103368478:A:G	rs313373	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr11	103378457	103378458	chr11:103378458:G:C	rs2408585	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	103583974	103583975	chr11:103583975:A:T	rs12787800	A	T	T	Hoxd3_MA0912.1	11	1	+	9.029764473623416	4.692073412529377	CATAAGTAATTAAAGT
chr11	103584071	103584072	chr11:103584072:A:G	rs12788020	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr11	104116788	104116789	chr11:104116789:G:A	rs111825952	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr11	104150025	104150026	chr11:104150026:A:T	rs10895593	A	T	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	105154837	105154838	chr11:105154838:A:T	rs17103866	A	T	A	Hoxd3_MA0912.1	3	1	-	7.876366000579928	8.44070244671222	CAGTGATAATTGCTGT
chr11	105801979	105801980	chr11:105801980:A:G	rs3819071	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr11	106022074	106022075	chr11:106022075:G:A	rs770800466	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	106022096	106022097	chr11:106022097:G:A	rs570582794	G	A	G	Hoxd3_MA0912.1	11	1	+	6.995069744395984	8.780995692576976	TTGCGCCAATTGCCGC
chr11	106022118	106022119	chr11:106022119:T:C	rs117177843	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	106137824	106137825	chr11:106137825:A:G	rs7944152	A	G	A	Hoxd3_MA0912.1	4	1	-	8.621747633480949	7.6479064512802415	TTAGTTTAATTAGACC
chr11	106387139	106387140	chr11:106387140:C:T	rs73549524	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	107855128	107855129	chr11:107855129:T:A	rs77187192	T	A	t	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	107988601	107988602	chr11:107988602:C:T	rs57688334	C	T	C	Hoxd3_MA0912.1	5	1	+	7.8109728854120934	8.128294327298502	ATGTGCCAATTACCAG
chr11	108189556	108189557	chr11:108189557:T:C	rs12419212	T	C	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr11	108221909	108221910	chr11:108221910:G:T	rs4987876	G	T	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr11	108518557	108518558	chr11:108518558:C:T	rs7943820	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	108835935	108835936	chr11:108835936:A:C	rs78497470	A	C	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	108835946	108835947	chr11:108835947:A:G	rs12802313	A	G	A	Hoxd3_MA0912.1	7	1	+	9.821596059976484	3.041912817346056	TTGTGTTAATTGGCCT
chr11	109625111	109625112	chr11:109625112:G:C	rs10789737	G	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr11	109945422	109945423	chr11:109945423:C:A	rs142912971	C	A	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	110132659	110132660	chr11:110132660:T:C	rs610984	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	110431918	110431919	chr11:110431919:G:A	rs4753892	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	110907185	110907186	chr11:110907186:A:G	rs918840	A	G	A	Hoxd3_MA0912.1	9	1	-	7.2237594834219525	0.33518702385659055	CTGAGCCAATGGCCCT
chr11	111064091	111064092	chr11:111064092:G:A	rs17112181	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr11	111077555	111077556	chr11:111077556:T:C	rs73015141	T	C	T	Hoxd3_MA0912.1	5	1	+	9.988236882103374	9.670915440216966	AAGAATTAATTAATCT
chr11	111446981	111446982	chr11:111446982:A:G	rs148786635	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr11	111476954	111476955	chr11:111476955:G:A	rs1893874	G	A	G	Hoxd3_MA0912.1	14	1	-	10.790462797586388	10.226126351454097	CTGGCTTAATTAATCT
chr11	111794084	111794085	chr11:111794085:C:T	rs114822997	C	T	c	Hoxd3_MA0912.1	0	1	-	8.000347485363402	9.320795280685708	GTGAGCTAATTATGCT
chr11	111942035	111942036	chr11:111942036:A:G	rs182237453	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	112165425	112165426	chr11:112165426:A:G	rs360719	A	G	A	Hoxd3_MA0912.1	14	1	+	9.801654849073792	10.745620178837925	TTGGGCCAATTAACAT
chr11	112477810	112477811	chr11:112477811:C:A	rs980855597	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr11	112626953	112626954	chr11:112626954:T:A	rs78095568	T	A	T	Hoxd3_MA0912.1	3	1	-	8.34414267193568	7.779806225803393	CTTAGATAATTAGTGG
chr11	112908160	112908161	chr11:112908161:C:A	rs10466574	C	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	112961682	112961683	chr11:112961683:T:A	rs73002342	T	A	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	112997742	112997743	chr11:112997743:C:A	rs60249257	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	113001944	113001945	chr11:113001945:C:G	rs782459714	C	G	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr11	113190010	113190011	chr11:113190011:A:C	rs1467696987	A	C	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	113565328	113565329	chr11:113565329:C:T	rs113490295	C	T	C	Hoxd3_MA0912.1	13	1	+	8.690638917458266	8.086402188945891	CTGCCGTAATTAACTG
chr11	113565349	113565350	chr11:113565350:A:G	rs7125588	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	113701112	113701113	chr11:113701113:C:G	rs1848702	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr11	113711781	113711782	chr11:113711782:T:C	rs3863293	T	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	113882323	113882324	chr11:113882324:T:G	rs11601924	T	G	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	114144392	114144393	chr11:114144393:A:G	rs672901	A	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	114144410	114144411	chr11:114144411:C:T	rs115946726	C	T	C	Hoxd3_MA0912.1	1	1	+	8.445895942908086	10.529956430444217	CCGTTTTAATTACCTG
chr11	114172759	114172760	chr11:114172760:C:T	rs75836508	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	114771900	114771901	chr11:114771901:A:C	rs7113782	A	C	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	114847780	114847781	chr11:114847781:T:C	rs4936306	T	C	T	Hoxd3_MA0912.1	1	1	-	9.77050762864548	8.91268335527129	CAGATCTAATTACATT
chr11	115434083	115434084	chr11:115434084:G:A	rs45587938	G	A	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	115628343	115628344	chr11:115628344:T:C	rs2186873	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr11	115760041	115760042	chr11:115760042:A:G	rs7952129	A	G	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr11	116112367	116112368	chr11:116112368:C:T	rs78343635	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr11	116274315	116274316	chr11:116274316:T:C	rs10891944	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr11	116355324	116355325	chr11:116355325:G:T	rs540786940	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	116440039	116440040	chr11:116440040:A:T	rs560320	A	T	A	Hoxd3_MA0912.1	11	1	+	8.690742861876394	4.353051800782354	ATGATTCAATTACCTC
chr11	116538394	116538395	chr11:116538395:T:C	rs7118201	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	116569857	116569858	chr11:116569858:C:T	rs10431039	C	T	C	Hoxd3_MA0912.1	15	1	+	9.919007942569491	10.6967125111575	CTGAATTAATTGCCCC
chr11	116628782	116628783	chr11:116628783:A:G	rs61270867	A	G	A	Hoxd3_MA0912.1	9	1	-	7.570955625140014	0.6823831655746526	CTGAGGTAATGAGTGA
chr11	116852454	116852455	chr11:116852455:T:C	rs583219	T	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	116920020	116920021	chr11:116920021:G:A	rs79713382	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	116994650	116994651	chr11:116994651:A:G	rs79349393	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr11	117019542	117019543	chr11:117019543:C:T	rs7113829	C	T	A	Hoxd3_MA0912.1	15	1	-	7.439874438418587	6.598875811459371	CTTTGTTAATGAGCCG
chr11	117045458	117045459	chr11:117045459:G:A	rs17496758	G	A	G	Hoxd3_MA0912.1	1	1	-	7.529415164531523	9.613475652067653	ACGGAGCAATTACCGT
chr11	117221623	117221624	chr11:117221624:C:T	rs59842799	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr11	117358175	117358176	chr11:117358176:G:A	rs560789	G	A	A	Hoxd3_MA0912.1	0	1	-	10.153134002776472	10.205639500154403	CTGGGCTAATTAAAAC
chr11	117604129	117604130	chr11:117604130:G:A	rs61697909	G	A	G	Hoxd3_MA0912.1	14	1	+	8.954188250910581	8.010222921146449	CTGAGCTCATTACCGA
chr11	117646708	117646709	chr11:117646709:C:T	rs537592	C	T	T	Hoxd3_MA0912.1	0	1	-	8.309091426978116	9.62953922230042	GTGGTGTAATTACTTC
chr11	117713628	117713629	chr11:117713629:T:C	rs76099780	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	117713652	117713653	chr11:117713653:T:C	rs2156233	T	C	T	Hoxd3_MA0912.1	5	1	-	9.122027863292773	9.846591240086097	TTGGTATAATTAATGA
chr11	117887942	117887943	chr11:117887943:C:G	rs580287	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	117908660	117908661	chr11:117908661:G:A	rs3741293	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr11	117908670	117908671	chr11:117908671:T:A	rs371636967	T	A	T	Hoxd3_MA0912.1	0	1	+	7.6416125679578855	6.925178436019149	TCGGTGTAATTGCTGT
chr11	118585698	118585699	chr11:118585699:T:C	rs11216914	T	C	C	Hoxd3_MA0912.1	1	1	+	7.537112840034574	5.4530523524984424	CTGGGCTAATTTCTGT
chr11	118667598	118667599	chr11:118667599:G:T	rs692750	G	T	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr11	119152029	119152030	chr11:119152030:A:C	rs78591480	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr11	119492451	119492452	chr11:119492452:A:G	rs917089178	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	119582867	119582868	chr11:119582868:A:C	rs1396776	A	C	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr11	119739779	119739780	chr11:119739780:C:T	rs58136657	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	119888336	119888337	chr11:119888337:T:G	rs61899013	T	G	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr11	119997192	119997193	chr11:119997193:G:T	rs11217621	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	119997227	119997228	chr11:119997228:C:G	rs11217622	C	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr11	120030044	120030045	chr11:120030045:G:A	rs12285127	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	120064624	120064625	chr11:120064625:T:A	rs60914924	T	A	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	120186704	120186705	chr11:120186705:A:T	rs507419	A	T	A	Hoxd3_MA0912.1	5	1	+	9.824361268764129	10.677719753763023	ATGAGATAATTAGCCC
chr11	120284593	120284594	chr11:120284594:A:G	rs4245211	A	G	G	Hoxd3_MA0912.1	0	1	+	8.337694205116833	7.017246409794529	ATCAGCTAATTATCCC
chr11	120284626	120284627	chr11:120284627:T:C	rs4936512	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr11	120316723	120316724	chr11:120316724:T:C	rs7102217	T	C	C	Hoxd3_MA0912.1	0	1	+	8.777727172841956	8.725221675464027	TTCAGTTCATTACTCT
chr11	120384731	120384732	chr11:120384732:A:G	rs187427246	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	120384752	120384753	chr11:120384753:G:C	rs146499499	G	C	G	Hoxd3_MA0912.1	2	1	+	8.71080210352444	6.927327685830493	CAGATTTAATTAGGCT
chr11	120569650	120569651	chr11:120569651:G:C	rs4310631	G	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	120609042	120609043	chr11:120609043:A:G	rs74573926	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr11	120715320	120715321	chr11:120715321:G:A	rs118171037	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr11	120842944	120842945	chr11:120842945:A:G	rs4482033	A	G	A	Hoxd3_MA0912.1	9	1	-	8.038730528417934	1.150158068852572	CTGGGTTCATTAGTTG
chr11	120859099	120859100	chr11:120859100:G:T	rs145954825	G	T	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr11	120917921	120917922	chr11:120917922:A:T	rs17124548	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr11	120955790	120955791	chr11:120955791:G:A	rs117391123	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr11	120998860	120998861	chr11:120998861:T:C	rs11820008	T	C	T	Hoxd3_MA0912.1	4	1	+	9.186214634037363	8.212373451836655	TAGTTTTAATTACTGC
chr11	121145001	121145002	chr11:121145002:C:T	rs11218161	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr11	121589054	121589055	chr11:121589055:C:T	rs117107826	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	121723077	121723078	chr11:121723078:C:A	rs754200559	C	A	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr11	121723136	121723137	chr11:121723137:T:C	rs148827623	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr11	121953080	121953081	chr11:121953081:G:T	rs11218476	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr11	122050504	122050505	chr11:122050505:T:G	rs115163644	T	G	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr11	122067818	122067819	chr11:122067819:T:G	rs4608085	T	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr11	122068844	122068845	chr11:122068845:A:G	rs11218519	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr11	122517011	122517012	chr11:122517012:A:C	rs896129	A	C	A	Hoxd3_MA0912.1	8	1	+	7.656005340334623	3.165328153567632	CTGAGGTAATTGGAAG
chr11	122746065	122746066	chr11:122746066:G:A	rs151254927	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	122746092	122746093	chr11:122746093:G:A	rs17126807	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	123374706	123374707	chr11:123374707:G:T	rs186579478	G	T	G	Hoxd3_MA0912.1	4	1	+	7.975924234889588	7.371687506377214	TAGGGCTAATGAGCTT
chr11	123406950	123406951	chr11:123406951:C:T	rs7934011	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr11	123460463	123460464	chr11:123460464:T:C	rs11219148	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr11	123526135	123526136	chr11:123526136:C:T	rs17740690	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr11	123550944	123550945	chr11:123550945:G:A	rs1290807	G	A	G	Hoxd3_MA0912.1	15	1	-	9.038966673122399	9.816671241710408	ATGTACTAATTACCAC
chr11	123578184	123578185	chr11:123578185:T:C	rs1275056	T	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	123655216	123655217	chr11:123655217:C:G	rs72552131	C	G	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr11	123801901	123801902	chr11:123801902:C:T	rs1939917	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr11	123965885	123965886	chr11:123965886:A:G	rs11560863	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr11	123998875	123998876	chr11:123998876:C:T	rs61908589	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	124168110	124168111	chr11:124168111:A:G	rs117709744	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	124171618	124171619	chr11:124171619:C:T	rs3018527	C	T	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr11	124559063	124559064	chr11:124559064:A:T	rs10790702	A	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr11	124658044	124658045	chr11:124658045:G:A	rs7926572	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	124813510	124813511	chr11:124813511:A:G	rs7115823	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	125903775	125903776	chr11:125903776:G:A	rs948467923	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	125945677	125945678	chr11:125945678:C:G	rs374627315	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr11	126190770	126190771	chr11:126190771:G:A	rs670712	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr11	126420209	126420210	chr11:126420210:T:G	rs370031164	T	G	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	126420221	126420222	chr11:126420222:T:C	rs116810172	T	C	t	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr11	126548822	126548823	chr11:126548823:C:T	rs113982080	C	T	C	Hoxd3_MA0912.1	5	1	-	7.05579740843841	6.331234031645087	CTGACGTCATTGCCTT
chr11	126576691	126576692	chr11:126576692:G:A	rs71475970	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	126608347	126608348	chr11:126608348:T:A	rs12792946	T	A	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr11	126862937	126862938	chr11:126862938:A:G	rs7117098	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr11	126862985	126862986	chr11:126862986:G:A	chr11:126862986:G:A	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr11	127052571	127052572	chr11:127052572:C:G	rs56694459	C	G	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr11	127052605	127052606	chr11:127052606:C:T	rs1426481422	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr11	127101430	127101431	chr11:127101431:A:C	rs12225946	A	C	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr11	127145393	127145394	chr11:127145394:C:G	rs11220807	C	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr11	127873024	127873025	chr11:127873025:T:A	rs4937266	T	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr11	127873050	127873051	chr11:127873051:C:T	rs71479903	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	128295231	128295232	chr11:128295232:G:A	rs12419147	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr11	128303142	128303143	chr11:128303143:A:G	rs117058338	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr11	128399202	128399203	chr11:128399203:G:A	rs76299412	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr11	128417954	128417955	chr11:128417955:T:C	rs12274537	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr11	128421733	128421734	chr11:128421734:C:G	rs7127295	C	G	C	Hoxd3_MA0912.1	14	1	+	7.702172717144379	7.525757351859932	CTGGGGCAATGACTCC
chr11	128424611	128424612	chr11:128424612:C:T	rs76226673	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr11	128505932	128505933	chr11:128505933:T:C	rs35594775	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	128514028	128514029	chr11:128514029:C:G	rs7117768	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr11	128790850	128790851	chr11:128790851:A:G	rs656972	A	G	A	Hoxd3_MA0912.1	12	1	+	9.131951563111066	8.164429332172036	CTGTGTTAATTGATGG
chr11	128881520	128881521	chr11:128881521:T:C	rs79788752	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr11	129324768	129324769	chr11:129324769:G:C	rs1048805935	G	C	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr11	129418376	129418377	chr11:129418377:G:A	rs144688814	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr11	129544684	129544685	chr11:129544685:G:A	rs1353071	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr11	129637138	129637139	chr11:129637139:G:T	rs952131	G	T	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr11	129686613	129686614	chr11:129686614:G:A	rs12576089	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr11	129705898	129705899	chr11:129705899:G:A	rs76540106	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr11	129705934	129705935	chr11:129705935:A:G	rs79203118	A	G	a	Hoxd3_MA0912.1	26	0	+	0	0	.
chr11	129825953	129825954	chr11:129825954:T:C	rs11221866	T	C	T	Hoxd3_MA0912.1	3	1	+	8.903148167548835	8.166466944969162	TAGTGTTAATTACAGA
chr11	130431778	130431779	chr11:130431779:T:G	rs970623700	T	G	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr11	130462417	130462418	chr11:130462418:C:A	rs61300224	C	A	C	Hoxd3_MA0912.1	13	1	+	7.6971880124877075	7.092951283975333	CTTGGTTCATTATCCC
chr11	130533319	130533320	chr11:130533320:T:A	rs10894214	T	A	T	Hoxd3_MA0912.1	5	1	-	7.537299074370109	8.390657559369004	CAGGGATCATTACACC
chr11	130533326	130533327	chr11:130533327:C:T	rs59850728	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr11	130596437	130596438	chr11:130596438:C:T	rs11222191	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	130623727	130623728	chr11:130623728:G:A	rs11222231	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr11	130625198	130625199	chr11:130625199:T:G	rs7126578	T	G	G	Hoxd3_MA0912.1	15	1	+	7.877336695101825	7.05332755847213	CAGAGCTAATTAGGAT
chr11	130694800	130694801	chr11:130694801:T:G	rs112407001	T	G	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr11	130799127	130799128	chr11:130799128:G:T	rs34877454	G	T	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr11	130811204	130811205	chr11:130811205:G:A	rs78545894	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr11	130817274	130817275	chr11:130817275:A:G	rs369157615	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr11	131327535	131327536	chr11:131327536:T:A	rs2511505	T	A	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr11	132055219	132055220	chr11:132055220:T:C	rs11222890	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr11	132077278	132077279	chr11:132077279:T:A	rs11222903	T	A	T	Hoxd3_MA0912.1	6	1	+	9.534384836200845	5.196693775106805	CTTAGATAATTAAACC
chr11	132080859	132080860	chr11:132080860:G:A	rs6590614	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr11	132220551	132220552	chr11:132220552:C:A	rs189832730	C	A	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr11	132327455	132327456	chr11:132327456:A:G	rs2029136	A	G	A	Hoxd3_MA0912.1	14	1	-	9.7415379988283	10.30587444496059	TTGGCCTAATTAACTG
chr11	132909970	132909971	chr11:132909971:T:C	rs1354791	T	C	T	Hoxd3_MA0912.1	0	1	+	9.346566429089043	9.294060931711112	TAGAGTTAATTGATGT
chr11	132910138	132910139	chr11:132910139:C:T	rs11223275	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	132910175	132910176	chr11:132910176:G:A	rs749422630	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr11	132962308	132962309	chr11:132962309:C:T	rs976942410	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr11	133048568	133048569	chr11:133048569:G:T	rs11223339	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr11	133386235	133386236	chr11:133386236:T:C	rs916865112	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr11	133835853	133835854	chr11:133835854:G:A	rs900237505	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr11	134391255	134391256	chr11:134391256:A:G	rs11223780	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr11	134433510	134433511	chr11:134433511:A:G	rs6590740	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr11	134595849	134595850	chr11:134595850:C:T	rs4937920	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr11	134635615	134635616	chr11:134635616:C:T	rs12788924	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr11	134646453	134646454	chr11:134646454:C:T	rs3019661	C	T	C	Hoxd3_MA0912.1	15	1	+	9.121288224112186	9.898992792700195	TTGTTCTAATTAAGGC
chr11	134748755	134748756	chr11:134748756:C:T	chr11:134748756:C:T	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr11	134843699	134843700	chr11:134843700:C:T	rs558551052	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr11	134843712	134843713	chr11:134843713:C:T	rs750957197	C	T	C	Hoxd3_MA0912.1	0	1	+	7.101551284301311	7.154056781679242	CGGGTCTAATTAGCAC
chr11	134866463	134866464	chr11:134866464:G:A	rs11224046	G	A	G	Hoxd3_MA0912.1	15	1	+	7.353745589628867	6.512746962669651	CTGAAGCAATTGCACG
chr11	135028953	135028954	chr11:135028954:G:T	rs7111462	G	T	g	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr12	269070	269071	chr12:269071:T:C	rs797757	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr12	481599	481600	chr12:481600:A:G	rs11063203	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	484852	484853	chr12:484853:G:A	rs12422837	G	A	A	Hoxd3_MA0912.1	12	1	-	6.754889407024922	5.548137487020058	CTGGGACCATTACTGG
chr12	502364	502365	chr12:502365:G:A	rs11063302	G	A	G	Hoxd3_MA0912.1	4	1	+	6.366626748170684	5.7623900196583095	CTGCGCTCATTGCCTC
chr12	602644	602645	chr12:602645:G:A	rs6489652	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	663074	663075	chr12:663075:A:G	rs41518048	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	993142	993143	chr12:993143:T:C	rs184503260	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	1851314	1851315	chr12:1851315:A:G	rs188784126	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr12	2170500	2170501	chr12:2170501:A:G	rs369431476	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr12	2244313	2244314	chr12:2244314:G:A	rs898919366	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr12	2284858	2284859	chr12:2284859:A:G	rs115500284	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr12	2311359	2311360	chr12:2311360:G:A	rs10774037	G	A	A	Hoxd3_MA0912.1	0	1	-	9.235343047393856	9.287848544771785	CTGCTTTAATTAATTC
chr12	2328106	2328107	chr12:2328107:G:A	rs10848646	G	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr12	2328708	2328709	chr12:2328709:C:T	rs7316184	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	2329161	2329162	chr12:2329162:C:T	rs2238063	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	2510576	2510577	chr12:2510577:T:A	rs60906495	T	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	2555770	2555771	chr12:2555771:G:A	rs733993	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr12	2578158	2578159	chr12:2578159:C:T	rs138502882	C	T	-	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	2578159	2578160	chr12:2578160:G:A	rs552019404	G	A	-	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	2645030	2645031	chr12:2645031:A:T	rs1003306	A	T	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	2785252	2785253	chr12:2785253:T:C	rs34915583	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	3091985	3091986	chr12:3091986:G:A	rs10848794	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr12	3091987	3091988	chr12:3091988:T:G	rs10848795	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr12	3122776	3122777	chr12:3122777:T:C	rs7955810	T	C	C	Hoxd3_MA0912.1	1	1	+	10.490056148064134	8.405995660528003	CTGAATTAATTAAATG
chr12	3131253	3131254	chr12:3131254:C:G	rs12321327	C	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr12	3194057	3194058	chr12:3194058:A:G	rs7955889	A	G	G	Hoxd3_MA0912.1	0	1	-	8.936094109327078	8.883588611949147	TTGAGTTCATTAACTA
chr12	3194062	3194063	chr12:3194063:G:A	rs7968641	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr12	3225689	3225690	chr12:3225690:A:G	rs3782815	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	3315376	3315377	chr12:3315377:G:A	rs187214070	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	3330548	3330549	chr12:3330549:A:G	rs12298469	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr12	3381653	3381654	chr12:3381654:T:C	rs10848860	T	C	T	Hoxd3_MA0912.1	10	1	+	9.580644833890766	2.8009615912603376	TTGTTTCAATTAAACT
chr12	3492637	3492638	chr12:3492638:C:G	rs906424126	C	G	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr12	3492654	3492655	chr12:3492655:A:G	rs73260089	A	G	A	Hoxd3_MA0912.1	9	1	-	8.309713373813212	1.4211409142478513	TTGTTGTAATGACAGC
chr12	3567756	3567757	chr12:3567757:A:C	rs769342614	A	C	a	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr12	3640903	3640904	chr12:3640904:T:C	rs4766151	T	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	3640942	3640943	chr12:3640943:A:T	rs11062747	A	T	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	4332739	4332740	chr12:4332740:T:C	rs10849040	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr12	4692465	4692466	chr12:4692466:T:G	rs10849120	T	G	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	4842527	4842528	chr12:4842528:A:G	rs113503477	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr12	4947757	4947758	chr12:4947758:A:G	rs7973708	A	G	G	Hoxd3_MA0912.1	15	1	-	11.816809477165027	11.039104908577018	TTGGTTTAATTAATCT
chr12	4960930	4960931	chr12:4960931:C:G	rs75872755	C	G	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	5024049	5024050	chr12:5024050:G:A	rs12818999	G	A	G	Hoxd3_MA0912.1	12	1	-	6.761293519331725	5.554541599326861	CTGGTCTCATGACCTC
chr12	5065878	5065879	chr12:5065879:G:T	rs74055925	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	5080556	5080557	chr12:5080557:T:C	rs6489605	T	C	T	Hoxd3_MA0912.1	9	1	+	9.198211765283784	2.309639305718422	CTGAGGTCATTGCCCT
chr12	5395818	5395819	chr12:5395819:G:A	rs7974693	G	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr12	5802439	5802440	chr12:5802440:C:T	rs189879250	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	5814981	5814982	chr12:5814982:C:T	rs11063875	C	T	T	Hoxd3_MA0912.1	13	1	+	8.451708105887171	7.847471377374797	ATGAGATAATGAGCGT
chr12	5915593	5915594	chr12:5915594:T:C	rs61908402	T	C	t	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	6223016	6223017	chr12:6223017:A:G	rs11568236	A	G	A	Hoxd3_MA0912.1	13	1	-	8.22438662569289	8.828623354205263	CAGTGCTCATTACTGT
chr12	6223031	6223032	chr12:6223032:C:G	rs11064093	C	G	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr12	6275277	6275278	chr12:6275278:C:T	rs111318081	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	6286510	6286511	chr12:6286511:C:A	chr12:6286511:C:A	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	6307812	6307813	chr12:6307813:G:A	rs887478	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	6371259	6371260	chr12:6371260:A:T	rs3782728	A	T	T	Hoxd3_MA0912.1	0	1	+	7.933524506647981	8.649958638586718	AGGGGCTCATTAACCT
chr12	6468973	6468974	chr12:6468974:A:T	rs2240866	A	T	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	6469588	6469589	chr12:6469589:G:A	rs74956629	G	A	G	Hoxd3_MA0912.1	4	1	+	8.443366242879977	7.839129514367603	TAGGGATAATTACAAC
chr12	6743407	6743408	chr12:6743408:C:T	rs11064357	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	7222675	7222676	chr12:7222676:T:C	rs10841559	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	7351780	7351781	chr12:7351781:T:A	rs7350585	T	A	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr12	7372313	7372314	chr12:7372314:C:G	rs7302073	C	G	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr12	7923088	7923089	chr12:7923089:A:G	rs741361	A	G	A	Hoxd3_MA0912.1	1	1	+	8.341256686875848	7.483432413501657	CAGAAGCAATTAACGG
chr12	7927234	7927235	chr12:7927235:C:G	rs114575011	C	G	G	Hoxd3_MA0912.1	4	1	-	9.551075728029598	7.972997817316517	CAGTGTTAATTAGCCC
chr12	7927287	7927288	chr12:7927288:T:G	rs78630585	T	G	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	8202657	8202658	chr12:8202658:T:C	rs11043962	T	C	c	Hoxd3_MA0912.1	8	1	-	6.419581966260645	-0.4689904933047178	CTGACCTCATGACCCG
chr12	8221025	8221026	chr12:8221026:A:C	rs2965681	A	C	-	Hoxd3_MA0912.1	22	0	+	0	0	.
chr12	8675896	8675897	chr12:8675897:C:A	rs56247214	C	A	C	Hoxd3_MA0912.1	10	1	-	8.627169077474939	10.601111443655459	CTTAATTAATGACCTT
chr12	8913561	8913562	chr12:8913562:T:C	rs10842537	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	9149102	9149103	chr12:9149103:G:A	rs146228349	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	9212188	9212189	chr12:9212189:C:T	rs77591716	C	T	C	Hoxd3_MA0912.1	0	1	+	7.42023147402429	7.472736971402221	CTGGGTTCATGAATGG
chr12	9376743	9376744	chr12:9376744:G:A	rs11050592	G	A	g	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	9668879	9668880	chr12:9668880:C:T	rs180691311	C	T	C	Hoxd3_MA0912.1	13	1	+	9.778607863580206	9.174371135067831	TTGGGGTAATGAGCGT
chr12	9717334	9717335	chr12:9717335:A:G	rs10772072	A	G	A	Hoxd3_MA0912.1	9	1	-	7.481167261195912	0.5925948016305495	CTGACATAATTGCCTG
chr12	9725742	9725743	chr12:9725743:C:A	rs79836275	C	A	C	Hoxd3_MA0912.1	0	1	+	9.12358011506757	8.459651480506764	CTGAGATAATTAGGTT
chr12	9727960	9727961	chr12:9727961:C:A	rs140406150	C	A	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	10004046	10004047	chr12:10004047:A:G	rs7305054	A	G	g	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	10130387	10130388	chr12:10130388:C:A	rs11833740	C	A	-	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	10186433	10186434	chr12:10186434:T:C	rs1011918752	T	C	T	Hoxd3_MA0912.1	9	1	+	7.5124448037365195	0.6238723441711551	TAGTGGTAATTGGCGC
chr12	10383647	10383648	chr12:10383648:T:C	rs1600127	T	C	T	Hoxd3_MA0912.1	9	1	+	8.04380275228685	1.1552302927214868	TAGACCTAATGAACCT
chr12	10538852	10538853	chr12:10538853:C:A	rs55962548	C	A	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr12	10538877	10538878	chr12:10538878:G:C	rs55776135	G	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	10564144	10564145	chr12:10564145:G:A	rs150901898	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	11017299	11017300	chr12:11017300:C:T	rs118040338	C	T	C	Hoxd3_MA0912.1	14	1	-	9.691144755232283	8.74717942546815	TTGTACCAATTACCGT
chr12	11580654	11580655	chr12:11580655:G:T	rs755459490	G	T	G	Hoxd3_MA0912.1	6	1	-	7.257958941954955	4.70619382904191	CTAGGGCAATTGCCTT
chr12	11673752	11673753	chr12:11673753:A:G	rs1419778366	A	G	A	Hoxd3_MA0912.1	8	1	+	8.346097472870145	1.4575250133047828	CTTGGGTAATGATCCT
chr12	11722842	11722843	chr12:11722843:G:T	rs1178893336	G	T	G	Hoxd3_MA0912.1	0	1	-	10.013047615981865	9.349118981421059	CTGCATTAATTACATT
chr12	11840203	11840204	chr12:11840204:C:G	rs2855741	C	G	C	Hoxd3_MA0912.1	5	1	+	8.155526284235092	8.34405261791593	CTTGTCTAATTAAGGG
chr12	12028664	12028665	chr12:12028665:C:T	rs10505761	C	T	C	Hoxd3_MA0912.1	15	1	-	8.70413019988314	7.863131572923924	CTGTTTTAATTGATCG
chr12	12534289	12534290	chr12:12534290:G:A	rs11054958	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	12833611	12833612	chr12:12833612:A:T	rs61913648	A	T	A	Hoxd3_MA0912.1	13	1	+	8.901848704668668	8.901848704668668	CTTAACTAATTACATC
chr12	13036359	13036360	chr12:13036360:G:A	rs143698238	G	A	g	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	13049084	13049085	chr12:13049085:C:G	rs7294646	C	G	c	Hoxd3_MA0912.1	14	1	-	9.121211546106936	9.297626911391385	TTTAAGTAATTAGCGG
chr12	13267895	13267896	chr12:13267896:T:G	rs7307818	T	G	T	Hoxd3_MA0912.1	11	1	-	7.934631512686383	1.1899953432740527	GTGAGTCAATTAAACC
chr12	13279153	13279154	chr12:13279154:T:C	rs58689945	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr12	13347961	13347962	chr12:13347962:G:A	rs7971776	G	A	g	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	13347990	13347991	chr12:13347991:A:T	rs73049083	A	T	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr12	13367374	13367375	chr12:13367375:C:T	rs7131895	C	T	C	Hoxd3_MA0912.1	12	1	+	7.200123594429678	5.993371674424814	TGAGGCTCATTACCCT
chr12	13386831	13386832	chr12:13386832:C:G	rs12306402	C	G	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	13386833	13386834	chr12:13386834:C:T	rs12306403	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr12	13901077	13901078	chr12:13901078:G:A	rs11055673	G	A	G	Hoxd3_MA0912.1	3	1	+	9.753462369477708	9.867560120516732	TTGGGCCAATTAAATT
chr12	14775836	14775837	chr12:14775837:C:T	rs74068121	C	T	C	Hoxd3_MA0912.1	6	1	+	7.251934022051112	9.037859970232104	CTGAAGCAATGACCTC
chr12	14797688	14797689	chr12:14797689:G:A	rs7305454	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	14802478	14802479	chr12:14802479:C:G	rs17761771	C	G	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr12	15171372	15171373	chr12:15171373:C:G	rs74068748	C	G	C	Hoxd3_MA0912.1	2	1	-	10.628766495863834	8.845292078169885	TTGTGTTAATTAAATC
chr12	15363274	15363275	chr12:15363275:T:C	rs73057259	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	15631116	15631117	chr12:15631117:G:A	rs193246965	G	A	G	Hoxd3_MA0912.1	13	1	-	10.611957904772824	10.00772117626045	ATGATTTAATTATCCT
chr12	16347560	16347561	chr12:16347561:G:C	rs113240564	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr12	16417176	16417177	chr12:16417177:T:C	rs6488845	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	17538267	17538268	chr12:17538268:A:T	rs1912875	A	T	A	Hoxd3_MA0912.1	15	1	-	8.301209802548822	6.636202038959911	AAGAGCTAATGAAACT
chr12	17579731	17579732	chr12:17579732:G:C	rs11043526	G	C	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr12	18110832	18110833	chr12:18110833:A:G	chr12:18110833:A:G	A	G	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	18154004	18154005	chr12:18154005:G:A	rs12309489	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr12	18296953	18296954	chr12:18296954:C:G	rs7978843	C	G	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	18296962	18296963	chr12:18296963:T:C	rs11044011	T	C	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	18463124	18463125	chr12:18463125:C:A	rs76692494	C	A	C	Hoxd3_MA0912.1	12	1	+	9.174732482667768	9.174732482667768	CAGCATTAATTACTGT
chr12	18555953	18555954	chr12:18555954:G:C	rs529230940	G	C	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr12	18721154	18721155	chr12:18721155:C:T	rs1487061	C	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	19026425	19026426	chr12:19026426:A:G	rs7968997	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	19223245	19223246	chr12:19223246:A:G	rs111478504	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr12	19273826	19273827	chr12:19273827:A:G	rs556212987	A	G	A	Hoxd3_MA0912.1	9	1	-	7.876820725743997	0.988248266178634	ATGAGTTAATGAGTGG
chr12	19575208	19575209	chr12:19575209:G:C	chr12:19575209:G:C	G	C	G	Hoxd3_MA0912.1	12	1	-	9.666938487519358	8.699416256580328	CTGTGCTAATGACCTT
chr12	19597829	19597830	chr12:19597830:A:G	rs6416207	A	G	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr12	19666077	19666078	chr12:19666078:A:G	rs10770517	A	G	G	Hoxd3_MA0912.1	4	1	+	8.224475442191704	8.828712170704078	CTGGAGCAATTACCTA
chr12	19793486	19793487	chr12:19793487:T:C	rs10841361	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	19848628	19848629	chr12:19848629:C:T	rs116083357	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	19967483	19967484	chr12:19967484:C:T	rs17368727	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr12	20053966	20053967	chr12:20053967:T:G	rs61910923	T	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	20175772	20175773	chr12:20175773:T:C	rs1427981	T	C	T	Hoxd3_MA0912.1	0	1	+	8.269937782468977	8.217432285091048	TTGAACTCATGAACCT
chr12	20184496	20184497	chr12:20184497:C:T	rs10505863	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	20286060	20286061	chr12:20286061:G:A	rs11045141	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr12	20426004	20426005	chr12:20426005:C:T	rs11045236	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	20723048	20723049	chr12:20723049:G:T	rs35653399	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr12	20731003	20731004	chr12:20731004:G:A	rs12296191	G	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr12	20750585	20750586	chr12:20750586:T:C	rs972507	T	C	T	Hoxd3_MA0912.1	8	1	-	9.987335376876155	3.098762917310793	TTAATCTAATTACTGT
chr12	20825039	20825040	chr12:20825040:G:A	rs34484512	G	A	G	Hoxd3_MA0912.1	14	1	-	8.502954066056532	7.938617619924241	CAGATTTAATTGGCCT
chr12	21444669	21444670	chr12:21444670:T:C	rs1024733	T	C	C	Hoxd3_MA0912.1	8	1	-	7.378135462841946	0.4895630032765838	TTGGTCTCATGACCCC
chr12	21851346	21851347	chr12:21851347:C:T	rs7966768	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	22117915	22117916	chr12:22117916:A:G	rs2909073	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr12	22527916	22527917	chr12:22527917:A:T	rs11046459	A	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	22715384	22715385	chr12:22715385:T:A	rs558594095	T	A	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	22861175	22861176	chr12:22861176:A:G	rs3962536	A	G	A	Hoxd3_MA0912.1	1	1	-	7.789306294418408	5.705245806882276	ATGGGTTAATGAGGCT
chr12	22861186	22861187	chr12:22861187:C:T	rs180918235	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	23472699	23472700	chr12:23472700:C:A	rs11046932	C	A	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	23740382	23740383	chr12:23740383:C:T	rs11047073	C	T	T	Hoxd3_MA0912.1	14	1	-	7.212234562826069	6.268269233061934	TCAGGGTAATGACCGT
chr12	24153387	24153388	chr12:24153388:A:G	rs71450417	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	24954195	24954196	chr12:24954196:A:G	rs10842439	A	G	N	Hoxd3_MA0912.1	16	0	-	0	0	.
chr12	25251908	25251909	chr12:25251909:C:G	rs150940108	C	G	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	25277254	25277255	chr12:25277255:C:A	rs80065338	C	A	C	Hoxd3_MA0912.1	12	1	+	10.468466969049164	10.468466969049164	CTAAGTTAATTACTTT
chr12	25293070	25293071	chr12:25293071:T:C	rs10842525	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	25343110	25343111	chr12:25343111:A:C	rs4130755	A	C	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	25385789	25385790	chr12:25385790:G:A	chr12:25385790:G:A	G	A	G	Hoxd3_MA0912.1	1	1	-	8.057322962789423	10.14138345032555	TCGGGCCAATTAAAGT
chr12	25385789	25385790	chr12:25385790:G:T	rs1057504646	G	T	G	Hoxd3_MA0912.1	1	1	-	8.057322962789423	8.91514723616361	TCGGGCCAATTAAAGT
chr12	25441313	25441314	chr12:25441314:C:T	rs2171843	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	25501510	25501511	chr12:25501511:A:C	rs16928967	A	C	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr12	25502587	25502588	chr12:25502588:C:T	rs10505967	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	25648969	25648970	chr12:25648970:T:G	rs186591432	T	G	t	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	26117625	26117626	chr12:26117626:A:T	chr12:26117626:A:T	A	T	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr12	26286229	26286230	chr12:26286230:T:C	rs11616142	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	26334802	26334803	chr12:26334803:A:G	rs79474565	A	G	A	Hoxd3_MA0912.1	8	1	+	7.783499632980602	0.894927173415239	TCGTGCCAATTACTCT
chr12	26452835	26452836	chr12:26452836:C:A	rs1502417	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr12	26539293	26539294	chr12:26539294:T:A	rs1002835	T	A	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr12	26686813	26686814	chr12:26686814:A:G	rs10743591	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr12	26690810	26690811	chr12:26690811:T:C	rs11048655	T	C	T	Hoxd3_MA0912.1	12	1	-	9.357123026924246	8.389600795985215	CTCTTTTAATTAACCC
chr12	26787356	26787357	chr12:26787357:A:G	rs139985205	A	G	A	Hoxd3_MA0912.1	1	1	-	9.829891290837844	7.745830803301715	TTGAGGTCATTATCCT
chr12	27305893	27305894	chr12:27305894:A:G	rs7313818	A	G	G	Hoxd3_MA0912.1	10	1	-	8.71404543947727	1.934362196846842	TTGTGGTAATTGCATC
chr12	27337721	27337722	chr12:27337722:C:G	rs67878842	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr12	27385721	27385722	chr12:27385722:A:C	rs3751221	A	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	27577323	27577324	chr12:27577324:A:C	rs7973196	A	C	A	Hoxd3_MA0912.1	11	1	+	7.585338783372743	0.8407026139604137	TGGGGTTAATGAATCC
chr12	27584236	27584237	chr12:27584237:G:A	rs12425827	G	A	G	Hoxd3_MA0912.1	15	1	-	7.660833003224655	8.438537571812663	CTGAGGTAATGAGGCC
chr12	27614979	27614980	chr12:27614980:G:A	rs10842952	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	27782534	27782535	chr12:27782535:C:G	rs3751234	C	G	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	27809169	27809170	chr12:27809170:C:T	rs10842991	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr12	28000059	28000060	chr12:28000060:G:A	rs805583	G	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr12	28000084	28000085	chr12:28000085:A:G	rs788464	A	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr12	28313637	28313638	chr12:28313638:A:G	rs7310297	A	G	A	Hoxd3_MA0912.1	8	1	+	9.44290080017398	2.5543283406086186	ATGGTCTAATTACCAG
chr12	28369827	28369828	chr12:28369828:C:T	rs78500430	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr12	28962264	28962265	chr12:28962265:C:T	rs11049958	C	T	C	Hoxd3_MA0912.1	2	1	-	9.379512370867285	7.929677326710246	TTGAGTTCATTGACCT
chr12	28975434	28975435	chr12:28975435:A:G	rs11049968	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr12	29116417	29116418	chr12:29116418:C:T	rs4931154	C	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr12	29119197	29119198	chr12:29119198:C:T	rs7966088	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr12	29200803	29200804	chr12:29200804:A:G	rs4105126	A	G	A	Hoxd3_MA0912.1	2	1	+	8.060541535218604	9.510376579375643	CAATGTCAATTACCCT
chr12	29217674	29217675	chr12:29217675:G:A	rs58527616	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr12	29299479	29299480	chr12:29299480:T:C	rs6487802	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr12	29495500	29495501	chr12:29495501:C:T	rs182892134	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	29630457	29630458	chr12:29630458:T:C	rs2194820	T	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr12	29640206	29640207	chr12:29640207:C:T	rs1549411	C	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	30000395	30000396	chr12:30000396:C:T	rs7313472	C	T	C	Hoxd3_MA0912.1	14	1	-	8.24584929647026	7.301883966706125	TGGGGGCAATTACTGT
chr12	30093410	30093411	chr12:30093411:C:T	rs11050649	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr12	30230774	30230775	chr12:30230775:G:T	rs2101304	G	T	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	30273971	30273972	chr12:30273972:G:C	rs10743709	G	C	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	30358929	30358930	chr12:30358930:G:A	rs12580195	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr12	30613634	30613635	chr12:30613635:G:A	rs142532957	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	30613662	30613663	chr12:30613663:G:A	rs192337322	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr12	30708198	30708199	chr12:30708199:T:C	rs2882855	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr12	31047529	31047530	chr12:31047530:A:G	rs35024	A	G	.	Hoxd3_MA0912.1	0	1	+	8.373421419989986	7.0529736246676835	ATGATCCAATTACCTC
chr12	31152057	31152058	chr12:31152058:C:T	rs28592641	C	T	.	Hoxd3_MA0912.1	10	1	-	7.865828440352519	3.0600875639026106	TTGATGTAATGGCTGT
chr12	31462444	31462445	chr12:31462445:T:C	rs34271764	T	C	T	Hoxd3_MA0912.1	9	1	+	8.372502761312331	1.4839303017469692	CAGAACTAATTGAAGT
chr12	31784093	31784094	chr12:31784094:G:C	rs16918935	G	C	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	31859736	31859737	chr12:31859737:C:T	rs1259709	C	T	C	Hoxd3_MA0912.1	4	1	-	7.934631512686383	7.330394784174008	GTGAGTCAATTAAACC
chr12	31859922	31859923	chr12:31859923:C:A	rs55965200	C	A	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr12	31876871	31876872	chr12:31876872:G:A	rs1666230	G	A	g	Hoxd3_MA0912.1	12	1	-	8.00119299860947	6.794441078604607	AGGATGTAATTACAGG
chr12	32093559	32093560	chr12:32093560:T:C	rs2668273	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr12	32140035	32140036	chr12:32140036:C:A	rs57434126	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr12	32218202	32218203	chr12:32218203:G:C	rs73078228	G	C	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr12	32471092	32471093	chr12:32471093:G:A	rs10844210	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	32568502	32568503	chr12:32568503:A:G	rs10844246	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	33640138	33640139	chr12:33640139:T:C	rs4244872	T	C	C	Hoxd3_MA0912.1	11	1	-	8.850120412944033	7.064194464763039	CTGGAGTAATTACTAA
chr12	33640986	33640987	chr12:33640987:T:C	rs12820852	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	33794948	33794949	chr12:33794949:C:T	rs11052914	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr12	34022115	34022116	chr12:34022116:G:C	rs572477036	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr12	34022116	34022117	chr12:34022117:A:G	rs542120834	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	38125319	38125320	chr12:38125320:A:G	rs11182416	A	G	A	Hoxd3_MA0912.1	9	1	-	9.666938660874157	2.778366201308796	CTGAGATAATTGATGT
chr12	38175663	38175664	chr12:38175664:A:C	rs74087472	A	C	c	Hoxd3_MA0912.1	3	1	+	7.86316616436593	6.562148495653966	CTGAGGTAAGTAAACT
chr12	38216924	38216925	chr12:38216925:T:C	rs7975597	T	C	-	Hoxd3_MA0912.1	25	0	+	0	0	.
chr12	38472657	38472658	chr12:38472658:A:G	rs6580630	A	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	38556024	38556025	chr12:38556025:G:A	rs76890603	G	A	G	Hoxd3_MA0912.1	4	1	+	8.10808056584789	7.503843837335518	CTTAGCCAATTAAAGC
chr12	39034127	39034128	chr12:39034128:T:G	rs7970834	T	G	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr12	39352519	39352520	chr12:39352520:G:C	rs78898476	G	C	G	Hoxd3_MA0912.1	12	1	+	9.03141201376737	9.998934244706401	CAGTGGTAATTAGATT
chr12	39418809	39418810	chr12:39418810:C:A	rs11172084	C	A	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr12	39539027	39539028	chr12:39539028:C:G	rs144618962	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	39577474	39577475	chr12:39577475:T:A	rs11172675	T	A	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr12	39617941	39617942	chr12:39617942:G:T	rs562471442	G	T	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr12	39780619	39780620	chr12:39780620:C:T	rs10747879	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	39930420	39930421	chr12:39930421:T:C	rs73092243	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	40321445	40321446	chr12:40321446:T:C	rs4768229	T	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr12	40332125	40332126	chr12:40332126:A:G	rs10878386	A	G	A	Hoxd3_MA0912.1	8	1	+	8.939938171957783	2.0513657123924216	TTGTGCTAATTGGCTT
chr12	40515119	40515120	chr12:40515120:T:A	rs11176994	T	A	.	Hoxd3_MA0912.1	10	1	+	8.72649427407857	1.946811031448143	CTGAGGTAATTGATGA
chr12	40808239	40808240	chr12:40808240:C:G	rs7487913	C	G	C	Hoxd3_MA0912.1	15	1	-	8.785941805281231	8.832246373322917	TAAAGATAATTAACCG
chr12	41300571	41300572	chr12:41300572:G:A	rs1897231	G	A	A	Hoxd3_MA0912.1	5	1	+	7.9235138299852546	7.198950453191931	TTGTGGTCATTATCTC
chr12	41439243	41439244	chr12:41439244:T:C	rs73128666	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	41477068	41477069	chr12:41477069:A:G	rs2730814	A	G	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr12	42140688	42140689	chr12:42140689:C:T	rs7298106	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr12	42324588	42324589	chr12:42324589:A:C	rs11181421	A	C	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr12	42611406	42611407	chr12:42611407:C:G	rs76354792	C	G	C	Hoxd3_MA0912.1	6	1	+	7.399685823656449	2.440975602425113	CTGGGCCAATTAGAAC
chr12	42960453	42960454	chr12:42960454:G:A	rs78042423	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	43100116	43100117	chr12:43100117:T:A	rs7311965	T	A	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr12	43113032	43113033	chr12:43113033:C:A	rs541773692	C	A	C	Hoxd3_MA0912.1	2	1	-	10.531203173966476	9.214012604415732	TAGATTTAATTAACCC
chr12	43151921	43151922	chr12:43151922:C:T	rs908154	C	T	C	Hoxd3_MA0912.1	12	1	-	8.563283562478436	9.530805793417466	GTGGGATAATTAGACT
chr12	43165434	43165435	chr12:43165435:A:C	rs10880428	A	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	43357353	43357354	chr12:43357354:T:G	rs77828638	T	G	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	43737893	43737894	chr12:43737894:T:C	rs10880557	T	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr12	43835068	43835069	chr12:43835069:T:C	rs4768048	T	C	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	43841441	43841442	chr12:43841442:T:C	rs2199390	T	C	T	Hoxd3_MA0912.1	9	1	+	9.56016269527943	2.671590235714067	CTGTGGTAATTAAATA
chr12	44540970	44540971	chr12:44540971:C:T	rs4768061	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	44654411	44654412	chr12:44654412:G:A	rs17651646	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	44672572	44672573	chr12:44672573:T:C	rs10785516	T	C	C	Hoxd3_MA0912.1	1	1	+	8.815185495474465	6.731125007938333	CTTTGTTAATTGAACT
chr12	44771346	44771347	chr12:44771347:A:T	rs986641	A	T	a	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	44771347	44771348	chr12:44771348:A:T	rs11182666	A	T	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	45388687	45388688	chr12:45388688:C:T	rs1459051244	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	45655304	45655305	chr12:45655305:T:C	rs115139683	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr12	45655319	45655320	chr12:45655320:A:C	rs4768655	A	C	C	Hoxd3_MA0912.1	11	1	+	11.794392145299684	5.049755975887356	TTGTATTAATTAACGT
chr12	45955075	45955076	chr12:45955076:T:C	rs17096361	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	46149170	46149171	chr12:46149171:G:A	rs1345091	G	A	A	Hoxd3_MA0912.1	13	1	-	7.1558134681282874	6.551576739615913	TTGTGCCCATTACCTC
chr12	46391092	46391093	chr12:46391093:C:G	rs74083758	C	G	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr12	46430380	46430381	chr12:46430381:T:C	rs11183479	T	C	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr12	46731115	46731116	chr12:46731116:G:A	rs11610453	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	47082945	47082946	chr12:47082946:A:G	rs114001545	A	G	A	Hoxd3_MA0912.1	9	1	-	7.872648873905577	0.9840764143402156	TTGGAGTCATTACTGA
chr12	47249057	47249058	chr12:47249058:C:T	rs855156	C	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	47293480	47293481	chr12:47293481:G:T	rs143326130	G	T	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr12	47335597	47335598	chr12:47335598:A:T	rs215334	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr12	47470639	47470640	chr12:47470640:G:A	rs78643454	G	A	.	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	47532352	47532353	chr12:47532353:T:C	rs1118832	T	C	N	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	47580765	47580766	chr12:47580766:A:G	rs111687147	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	47888235	47888236	chr12:47888236:C:G	rs12298585	C	G	C	Hoxd3_MA0912.1	6	1	+	8.690742861876394	3.7320326406450595	ATGATTCAATTACCTC
chr12	48002891	48002892	chr12:48002892:C:T	rs1051343440	C	T	C	Hoxd3_MA0912.1	3	1	+	8.494169209157834	9.230850431737506	CTGCGCTAATGACCGG
chr12	48037413	48037414	chr12:48037414:A:G	rs58096169	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	48102876	48102877	chr12:48102877:C:T	rs17122651	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	48739941	48739942	chr12:48739942:C:T	rs10875867	C	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	49019702	49019703	chr12:49019703:C:T	rs7975791	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	49869233	49869234	chr12:49869234:G:A	rs561333964	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	50129107	50129108	chr12:50129108:C:T	rs7314598	C	T	T	Hoxd3_MA0912.1	15	1	-	9.227544202104546	8.38654557514533	ATAATCTAATTAACCG
chr12	50149417	50149418	chr12:50149418:A:G	rs7294548	A	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr12	50392860	50392861	chr12:50392861:C:G	rs11169408	C	G	c	Hoxd3_MA0912.1	22	0	+	0	0	.
chr12	50400249	50400250	chr12:50400250:T:A	rs6580749	T	A	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	50517210	50517211	chr12:50517211:A:G	rs11169472	A	G	a	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	50613783	50613784	chr12:50613784:C:T	rs79471269	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	50849195	50849196	chr12:50849196:C:T	rs4768938	C	T	T	Hoxd3_MA0912.1	0	1	+	9.36950907848104	9.422014575858968	CTGTTTTAATTATCTC
chr12	51167789	51167790	chr12:51167790:G:A	rs11169731	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr12	51199172	51199173	chr12:51199173:A:G	rs11169759	A	G	-	Hoxd3_MA0912.1	10	1	-	7.693655660376859	0.9139724177464306	TTGGTTCCATTAGCCT
chr12	51199197	51199198	chr12:51199198:G:A	rs7398010	G	A	-	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	51217547	51217548	chr12:51217548:C:T	rs1204983970	C	T	C	Hoxd3_MA0912.1	12	1	+	8.229385340425836	7.022633420420972	TTATGCTAATTACGGG
chr12	51884561	51884562	chr12:51884562:T:C	rs706830	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	52210695	52210696	chr12:52210696:C:T	rs897911631	C	T	C	Hoxd3_MA0912.1	12	1	+	7.176715593030494	5.969963673025629	CTGTCGTCATTACCCA
chr12	52300371	52300372	chr12:52300372:A:G	rs76413558	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr12	52351665	52351666	chr12:52351666:T:C	rs74096026	T	C	T	Hoxd3_MA0912.1	9	1	+	6.8479493709705	-0.04062308859486241	CTGTGGCCATTGACCT
chr12	52361404	52361405	chr12:52361405:A:G	rs2298797	A	G	A	Hoxd3_MA0912.1	9	1	-	7.437926472151544	0.5493540125861804	CTGAACTCATTGGCCT
chr12	52507823	52507824	chr12:52507824:C:T	rs3847839	C	T	C	Hoxd3_MA0912.1	14	1	-	7.534446095371607	6.590480765607472	GTGTGATAATGACCGT
chr12	52524561	52524562	chr12:52524562:G:A	rs73103302	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	52567925	52567926	chr12:52567926:G:A	rs79199336	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	52606381	52606382	chr12:52606382:G:A	rs7979844	G	A	g	Hoxd3_MA0912.1	18	0	-	0	0	.
chr12	52607202	52607203	chr12:52607203:A:C	rs670142	A	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	52662409	52662410	chr12:52662410:C:T	rs10876319	C	T	c	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	52682197	52682198	chr12:52682198:C:T	rs17679190	C	T	C	Hoxd3_MA0912.1	7	1	+	7.687114223539176	2.881373347089266	CTGGTCCCATTACTCT
chr12	52836786	52836787	chr12:52836787:G:A	rs73106418	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr12	52873514	52873515	chr12:52873515:A:G	rs2638519	A	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	52873524	52873525	chr12:52873525:G:C	rs56207534	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr12	52884666	52884667	chr12:52884667:A:G	rs75049745	A	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr12	52925887	52925888	chr12:52925888:C:T	rs77749782	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	53489752	53489753	chr12:53489753:T:C	rs77511173	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr12	53713526	53713527	chr12:53713527:G:A	rs57457705	G	A	G	Hoxd3_MA0912.1	15	1	+	7.75557741162065	6.914578784661434	CTTCTCTAATTAGCCG
chr12	53860474	53860475	chr12:53860475:C:A	rs61923719	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr12	54006443	54006444	chr12:54006444:C:A	rs12822416	C	A	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr12	54388749	54388750	chr12:54388750:T:C	rs56901156	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	54878399	54878400	chr12:54878400:A:C	rs2887909	A	C	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	54948676	54948677	chr12:54948677:C:T	rs35371758	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr12	54954944	54954945	chr12:54954945:T:A	rs36121574	T	A	A	Hoxd3_MA0912.1	9	1	+	9.189726116051226	4.699048929284232	TTTGGATAATTACCCA
chr12	55105304	55105305	chr12:55105305:A:G	rs9805039	A	G	a	Hoxd3_MA0912.1	4	1	-	9.352599272321424	8.378758090120716	TTTCTTTAATTACCTT
chr12	55112583	55112584	chr12:55112584:T:C	rs10876700	T	C	t	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	55399307	55399308	chr12:55399308:G:T	rs6581042	G	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	56103834	56103835	chr12:56103835:T:C	rs773122	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	56222660	56222661	chr12:56222661:G:A	rs114511206	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	56645295	56645296	chr12:56645296:C:T	rs41291993	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr12	56683341	56683342	chr12:56683342:G:A	rs985949306	G	A	g	Hoxd3_MA0912.1	27	0	+	0	0	.
chr12	56840484	56840485	chr12:56840485:G:A	rs118138059	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	57147481	57147482	chr12:57147482:C:T	rs2306692	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	57360815	57360816	chr12:57360816:G:A	rs10876977	G	A	-	Hoxd3_MA0912.1	29	0	-	0	0	.
chr12	57524301	57524302	chr12:57524302:C:A	rs61741508	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	57623917	57623918	chr12:57623918:T:G	rs7314152	T	G	G	Hoxd3_MA0912.1	8	1	-	7.883464069825411	3.3927868830584185	CTCTGCTCATTACCTT
chr12	57843488	57843489	chr12:57843489:C:T	rs145652993	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	58491338	58491339	chr12:58491339:T:C	rs12823793	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr12	59072298	59072299	chr12:59072299:T:C	rs1444089	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr12	59215265	59215266	chr12:59215266:T:A	rs12318105	T	A	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	59459155	59459156	chr12:59459156:T:C	rs7974674	T	C	C	Hoxd3_MA0912.1	1	1	+	8.193866584525122	6.109806096988994	ATGCGTTAATGAACGC
chr12	60036658	60036659	chr12:60036659:G:T	rs2886151	G	T	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	60173622	60173623	chr12:60173623:T:A	rs17602381	T	A	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	61386154	61386155	chr12:61386155:C:A	rs11173931	C	A	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr12	61389155	61389156	chr12:61389156:T:A	rs1606949	T	A	A	Hoxd3_MA0912.1	13	1	-	9.034116948230917	9.034116948230917	AAGATTTAATTACAGC
chr12	61681245	61681246	chr12:61681246:T:C	rs75074592	T	C	T	Hoxd3_MA0912.1	8	1	-	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr12	62129496	62129497	chr12:62129497:T:C	rs10877797	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr12	62129516	62129517	chr12:62129517:G:A	rs1663473	G	A	A	Hoxd3_MA0912.1	1	1	+	8.15932541451191	9.0171496878861	CGGTGGTAATGAACGT
chr12	62847120	62847121	chr12:62847121:G:A	rs1498662	G	A	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr12	63011629	63011630	chr12:63011630:G:A	rs77404422	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	63086198	63086199	chr12:63086199:T:C	rs75200236	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr12	63134641	63134642	chr12:63134642:G:A	rs7964874	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	64093646	64093647	chr12:64093647:C:T	rs1567765	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr12	64147179	64147180	chr12:64147180:A:G	rs7131691	A	G	A	Hoxd3_MA0912.1	9	1	-	10.080551411995717	3.191978952430354	CTGATTTAATTACGCG
chr12	64332031	64332032	chr12:64332032:C:T	rs6581541	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr12	64361323	64361324	chr12:64361324:C:G	rs12229772	C	G	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	64408082	64408083	chr12:64408083:C:T	rs7962498	C	T	C	Hoxd3_MA0912.1	14	1	-	10.008466197118691	9.064500867354559	TTGTTTCAATTACCGT
chr12	64781479	64781480	chr12:64781480:G:C	rs7304263	G	C	G	Hoxd3_MA0912.1	6	1	-	9.367276711435048	4.408566490203712	TTGATTCAATTACTCC
chr12	64917078	64917079	chr12:64917079:C:T	rs10878215	C	T	C	Hoxd3_MA0912.1	4	1	-	7.949189295404899	7.344952566892525	TTGGGCTCATTATGCT
chr12	65012352	65012353	chr12:65012353:A:C	rs11175628	A	C	A	Hoxd3_MA0912.1	11	1	+	8.7989875101282	2.0543513407158702	TTCTGTTAATTACATG
chr12	65185038	65185039	chr12:65185039:T:G	rs75563741	T	G	T	Hoxd3_MA0912.1	10	1	+	9.142123068296906	7.168180702116387	CTCAAGTAATTACTCG
chr12	65447057	65447058	chr12:65447058:A:T	rs180855241	A	T	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr12	65803508	65803509	chr12:65803509:C:T	rs2259603	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	65803546	65803547	chr12:65803547:G:T	rs2259604	G	T	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	65827028	65827029	chr12:65827029:C:T	rs111788190	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	65911465	65911466	chr12:65911466:T:G	rs748840266	T	G	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr12	66065699	66065700	chr12:66065700:A:G	rs12423372	A	G	G	Hoxd3_MA0912.1	0	1	-	7.894416620610085	7.841911123232154	TTGAACTAATGAGTCC
chr12	66066541	66066542	chr12:66066542:G:T	rs1037809024	G	T	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	66066582	66066583	chr12:66066583:C:A	rs193077746	C	A	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr12	66163435	66163436	chr12:66163436:G:A	rs12814606	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	66341640	66341641	chr12:66341641:T:C	rs1183272	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr12	66837519	66837520	chr12:66837520:C:T	rs12309869	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	66884391	66884392	chr12:66884392:G:A	rs576862033	G	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	67388078	67388079	chr12:67388079:T:C	rs7955266	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	67391298	67391299	chr12:67391299:A:C	rs12580510	A	C	A	Hoxd3_MA0912.1	4	1	-	7.5688401818547	8.173076910367074	TGGATGTAATTGGCCT
chr12	67394734	67394735	chr12:67394735:C:T	rs17249055	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	68049267	68049268	chr12:68049268:A:T	rs11177020	A	T	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	68114041	68114042	chr12:68114042:G:T	rs2193042	G	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	68202502	68202503	chr12:68202503:A:G	rs11570959	A	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr12	68270281	68270282	chr12:68270282:G:A	rs73138170	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	68298064	68298065	chr12:68298065:T:A	rs6581809	T	A	A	Hoxd3_MA0912.1	8	1	-	7.80350356045699	3.312826373689999	CAGTGGTAATTGAGCT
chr12	69254547	69254548	chr12:69254548:C:T	rs11177572	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	69266342	69266343	chr12:69266343:A:G	rs142063200	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	69331529	69331530	chr12:69331530:C:T	rs77014249	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr12	69630878	69630879	chr12:69630879:T:C	rs73148459	T	C	t	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	69649471	69649472	chr12:69649472:G:A	rs111963394	G	A	G	Hoxd3_MA0912.1	13	1	-	9.249086226201232	8.644849497688858	GTGAAGTAATTACCAT
chr12	69684391	69684392	chr12:69684392:C:T	rs710714	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	70126289	70126290	chr12:70126290:A:C	rs57407137	A	C	c	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr12	70557730	70557731	chr12:70557731:C:G	rs3782375	C	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	70608251	70608252	chr12:70608252:G:C	rs73146074	G	C	G	Hoxd3_MA0912.1	4	1	-	7.963095951505862	9.541173862218944	CTGACTTCATTAGTCT
chr12	70608261	70608262	chr12:70608262:C:A	rs2583993	C	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr12	70853229	70853230	chr12:70853230:T:C	rs6581970	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr12	70885998	70885999	chr12:70885999:G:A	rs78902774	G	A	G	Hoxd3_MA0912.1	0	1	-	8.590032448844116	8.642537946222047	CTGGTTTAATTGATTG
chr12	70908381	70908382	chr12:70908382:C:T	rs11178484	C	T	C	Hoxd3_MA0912.1	0	1	-	7.934631512686383	9.255079308008686	GTGAGTCAATTACACC
chr12	71201342	71201343	chr12:71201343:A:T	rs1798078	A	T	T	Hoxd3_MA0912.1	3	1	-	8.977299821045609	9.5416362671779	TGGTTGTAATTACAGT
chr12	71695259	71695260	chr12:71695260:A:G	rs7967428	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	71695284	71695285	chr12:71695285:G:A	rs140889262	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	71780289	71780290	chr12:71780290:C:G	rs10879336	C	G	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	71780328	71780329	chr12:71780329:A:G	rs144206035	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	71983282	71983283	chr12:71983283:G:A	rs67752672	G	A	G	Hoxd3_MA0912.1	5	1	+	8.593975036771411	7.869411659978086	CTGAGGCAATGAATCT
chr12	72266002	72266003	chr12:72266003:T:C	rs10879389	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	72276944	72276945	chr12:72276945:A:G	rs9668174	A	G	G	Hoxd3_MA0912.1	14	1	+	7.945268762522018	8.88923409228615	CTGAAATAATTGCCAC
chr12	72330540	72330541	chr12:72330541:T:G	chr12:72330541:T:G	T	G	T	Hoxd3_MA0912.1	11	1	-	8.075274444576586	1.330638275164256	TGGGTCTAATTACCAG
chr12	72502228	72502229	chr12:72502229:C:T	rs192601889	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	73769552	73769553	chr12:73769553:G:A	rs140781797	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr12	74547159	74547160	chr12:74547160:G:A	rs2605374	G	A	G	Hoxd3_MA0912.1	5	1	+	10.34695504317416	9.622391666380837	CAGATGTAATTAAAGT
chr12	74619392	74619393	chr12:74619393:C:A	rs2605353	C	A	A	Hoxd3_MA0912.1	5	1	-	8.663246991618676	8.792042099824247	CAGGAGCAATTACCTT
chr12	74770834	74770835	chr12:74770835:C:T	rs7974207	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	74946575	74946576	chr12:74946576:T:G	rs55877992	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	75307157	75307158	chr12:75307158:G:T	rs111881197	G	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr12	75477483	75477484	chr12:75477484:A:G	rs17217158	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	75662029	75662030	chr12:75662030:C:T	rs1882021	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr12	75855493	75855494	chr12:75855494:C:A	rs73376409	C	A	C	Hoxd3_MA0912.1	11	1	-	8.536362412793729	5.984597299880681	TGGAAGTAATTGCCCT
chr12	76003324	76003325	chr12:76003325:C:G	rs1344796	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr12	76086408	76086409	chr12:76086409:T:C	rs73133169	T	C	T	Hoxd3_MA0912.1	11	1	-	9.527117174982033	7.741191226801039	ATATGCTAATTACCTT
chr12	76666950	76666951	chr12:76666951:C:A	rs12581023	C	A	C	Hoxd3_MA0912.1	2	1	-	8.526642169424683	7.209451599873939	TTGCTCTAATTGCTCT
chr12	76865727	76865728	chr12:76865728:G:A	rs762786	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	77162275	77162276	chr12:77162276:T:C	rs2682805	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	77392880	77392881	chr12:77392881:G:A	rs189933766	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	78025363	78025364	chr12:78025364:G:A	rs117063497	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr12	78051948	78051949	chr12:78051949:A:G	rs17821307	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	78051980	78051981	chr12:78051981:C:T	rs11832439	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	78249190	78249191	chr12:78249191:A:G	rs938032	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr12	78951948	78951949	chr12:78951949:A:G	chr12:78951949:A:G	A	G	A	Hoxd3_MA0912.1	10	1	-	8.747535240441874	1.9678519978114466	CTAAGCTAATTAGTGG
chr12	79135869	79135870	chr12:79135870:T:C	rs10506812	T	C	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr12	79251254	79251255	chr12:79251255:C:T	rs1245824	C	T	C	Hoxd3_MA0912.1	13	1	+	8.750535670022277	8.146298941509903	ATACTCTAATTACCCT
chr12	79523843	79523844	chr12:79523844:C:G	rs11114157	C	G	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	80164676	80164677	chr12:80164677:G:A	rs1245015	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr12	80190274	80190275	chr12:80190275:G:C	rs117534551	G	C	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr12	80444231	80444232	chr12:80444232:T:C	rs10746166	T	C	C	Hoxd3_MA0912.1	1	1	+	8.025002682909752	5.940942195373621	ATGGGCTCATTAATTG
chr12	80868778	80868779	chr12:80868779:A:G	rs7310349	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	80872313	80872314	chr12:80872314:G:A	rs3825099	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	80934052	80934053	chr12:80934053:A:G	rs12311427	A	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr12	81298493	81298494	chr12:81298494:A:G	rs1882186	A	G	G	Hoxd3_MA0912.1	12	1	-	8.255847453377209	9.462599373382073	CAGAGGTAATTATACA
chr12	81579565	81579566	chr12:81579566:C:T	rs74106663	C	T	C	Hoxd3_MA0912.1	4	1	-	9.48721689260195	8.882980164089576	ATAAGCTAATTAAATT
chr12	81790687	81790688	chr12:81790688:C:A	rs7965168	C	A	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr12	82015779	82015780	chr12:82015780:T:G	rs10506858	T	G	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	82209591	82209592	chr12:82209592:A:G	rs12828940	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	82765904	82765905	chr12:82765905:G:A	rs7313685	G	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	82810746	82810747	chr12:82810747:G:A	rs73157494	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr12	83324020	83324021	chr12:83324021:T:C	rs73145530	T	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	83514500	83514501	chr12:83514501:A:G	rs3103477	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr12	83601241	83601242	chr12:83601242:G:A	rs682068	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	83614077	83614078	chr12:83614078:C:T	rs1511581	C	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr12	83630339	83630340	chr12:83630340:G:A	rs1397894	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr12	83658227	83658228	chr12:83658228:C:T	rs10779020	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	83893474	83893475	chr12:83893475:G:A	rs4340147	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	84502852	84502853	chr12:84502853:C:A	rs7954812	C	A	C	Hoxd3_MA0912.1	2	1	-	9.113508242835291	7.796317673284547	TAGATATAATTACCTC
chr12	84582865	84582866	chr12:84582866:A:G	rs12312284	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	84658663	84658664	chr12:84658664:C:A	rs7973896	C	A	C	Hoxd3_MA0912.1	7	1	+	9.263833307685669	11.237775673866189	TTGAAGTCATTAAATT
chr12	84791616	84791617	chr12:84791617:C:A	rs1782934	C	A	A	Hoxd3_MA0912.1	7	1	+	8.458473686889285	10.432416053069804	CTTATGTCATTACACT
chr12	85755557	85755558	chr12:85755558:A:T	rs2405621	A	T	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr12	85775762	85775763	chr12:85775763:A:G	rs11610789	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	86495686	86495687	chr12:86495687:A:T	rs1922745	A	T	T	Hoxd3_MA0912.1	6	1	-	8.13218560701202	3.7944945459179817	ATGGGATAATTAGGCC
chr12	86838661	86838662	chr12:86838662:G:C	rs76409639	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	87031047	87031048	chr12:87031048:T:C	rs1897634	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	87075393	87075394	chr12:87075394:G:A	rs1882660	G	A	G	Hoxd3_MA0912.1	13	1	+	7.324390040242909	8.298231222443619	CTGCTGTAATGACGGT
chr12	87383149	87383150	chr12:87383150:G:A	rs56023642	G	A	A	Hoxd3_MA0912.1	0	1	-	8.435300101805609	8.48780559918354	CGGGGCTAATTAGATT
chr12	87796821	87796822	chr12:87796822:G:A	rs1796309	G	A	.	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr12	87848037	87848038	chr12:87848038:T:C	rs10777066	T	C	C	Hoxd3_MA0912.1	0	1	+	8.096841445183596	8.044335947805667	TTGGGTCCATTACATT
chr12	87935494	87935495	chr12:87935495:T:C	rs4842469	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr12	87967971	87967972	chr12:87967972:A:G	rs80145169	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr12	88761318	88761319	chr12:88761319:G:A	rs7305945	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	89038841	89038842	chr12:89038842:T:G	rs150606791	T	G	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr12	89393678	89393679	chr12:89393679:C:T	rs113648049	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr12	89471014	89471015	chr12:89471015:T:C	rs77453100	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr12	89471041	89471042	chr12:89471042:T:C	rs76547427	T	C	T	Hoxd3_MA0912.1	2	1	-	10.165882203756137	11.615717247913176	ATAGGGTAATTAACTT
chr12	89544812	89544813	chr12:89544813:G:A	rs11105325	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	90325447	90325448	chr12:90325448:G:T	rs704091	G	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr12	90515437	90515438	chr12:90515438:A:C	rs145169473	A	C	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr12	90779212	90779213	chr12:90779213:C:T	rs17193501	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	90896075	90896076	chr12:90896076:G:A	rs79919555	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr12	90959299	90959300	chr12:90959300:T:A	rs7975842	T	A	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr12	91009598	91009599	chr12:91009599:C:T	rs11105913	C	T	C	Hoxd3_MA0912.1	5	1	-	9.076903819988868	8.352340443195542	TTGTTGTAATTATAGC
chr12	91539245	91539246	chr12:91539246:C:T	rs10859165	C	T	c	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	91586722	91586723	chr12:91586723:T:C	rs4399376	T	C	C	Hoxd3_MA0912.1	15	1	+	10.11997985148245	9.342275282894441	TTTATCTAATTAATGT
chr12	91759931	91759932	chr12:91759932:A:G	rs118084507	A	G	A	Hoxd3_MA0912.1	9	1	-	8.296755678771385	1.408183219206022	CTTGTTTCATTACAGT
chr12	91929923	91929924	chr12:91929924:G:A	rs12424367	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	92185594	92185595	chr12:92185595:C:G	rs17790040	C	G	c	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr12	92369842	92369843	chr12:92369843:C:T	rs776041747	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr12	92426450	92426451	chr12:92426451:T:G	rs76521619	T	G	T	Hoxd3_MA0912.1	1	1	+	7.819428942071946	5.735368454535816	TTTGGGTAATGGCCCT
chr12	92426704	92426705	chr12:92426705:T:A	rs10745593	T	A	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	92426716	92426717	chr12:92426717:C:T	rs12580883	C	T	C	Hoxd3_MA0912.1	12	1	-	7.453133744999402	8.420655975938432	CTGGTTTCATGAGCCT
chr12	92433239	92433240	chr12:92433240:C:T	rs12578375	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	92539457	92539458	chr12:92539458:G:T	rs144062020	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr12	92732494	92732495	chr12:92732495:T:C	rs115014312	T	C	C	Hoxd3_MA0912.1	4	1	-	9.274073039701236	9.87830976821361	CAGAACTAATTAACCA
chr12	92737426	92737427	chr12:92737427:A:C	rs2036553	A	C	A	Hoxd3_MA0912.1	13	1	-	7.6108112389280596	6.636970056727351	CAGGTCTAATTGATCG
chr12	92912246	92912247	chr12:92912247:A:C	rs139028118	A	C	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	92912256	92912257	chr12:92912257:T:C	rs2244302	T	C	t	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	93107134	93107135	chr12:93107135:A:T	rs79295941	A	T	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr12	93577688	93577689	chr12:93577689:T:G	rs74774845	T	G	T	Hoxd3_MA0912.1	1	1	-	9.224487809672699	8.366663536298507	CAGTGCTAATTAAGGT
chr12	93624604	93624605	chr12:93624605:G:A	rs57409806	G	A	A	Hoxd3_MA0912.1	15	1	+	9.914220275479495	9.07322164852028	ATGTGTTAATTACCAG
chr12	93889195	93889196	chr12:93889196:T:C	rs733752	T	C	t	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	94057839	94057840	chr12:94057840:G:A	chr12:94057840:G:A	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr12	94187504	94187505	chr12:94187505:C:T	rs61926947	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr12	94277634	94277635	chr12:94277635:C:T	rs832508	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr12	94290311	94290312	chr12:94290312:T:A	rs111913735	T	A	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr12	94614365	94614366	chr12:94614366:C:T	rs117853465	C	T	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	94614395	94614396	chr12:94614396:A:G	rs17022897	A	G	A	Hoxd3_MA0912.1	0	1	-	7.421840159840564	7.3693346624626335	TGGGGGCAATTACAGG
chr12	94717828	94717829	chr12:94717829:C:T	rs141224996	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr12	94717836	94717837	chr12:94717837:G:A	rs192893773	G	A	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr12	94844563	94844564	chr12:94844564:C:T	rs6538559	C	T	.	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	94865923	94865924	chr12:94865924:T:C	rs1991929	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	94872102	94872103	chr12:94872103:A:G	rs61935448	A	G	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr12	94988808	94988809	chr12:94988809:C:G	rs10859817	C	G	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	94988824	94988825	chr12:94988825:C:T	rs12299025	C	T	C	Hoxd3_MA0912.1	14	1	-	8.022717482214196	7.078752152450064	CTGTTTTAATGAGCGC
chr12	95443140	95443141	chr12:95443141:G:T	rs2596751	G	T	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr12	95443153	95443154	chr12:95443154:A:G	rs2658704	A	G	A	Hoxd3_MA0912.1	3	1	-	8.060541535218604	7.3238603126389314	CAATGTCAATTACCCT
chr12	95612418	95612419	chr12:95612419:A:C	rs73216594	A	C	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	95763363	95763364	chr12:95763364:G:A	rs7302432	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr12	95803384	95803385	chr12:95803385:C:T	rs148717219	C	T	C	Hoxd3_MA0912.1	14	1	-	9.064922677229394	8.12095734746526	CTAGTATAATTAACGG
chr12	95877879	95877880	chr12:95877880:G:T	rs879846	G	T	T	Hoxd3_MA0912.1	0	1	-	9.069119554253684	8.40519091969288	CAGGAGTAATTAACAG
chr12	95990566	95990567	chr12:95990567:T:C	rs17676826	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	96034999	96035000	chr12:96035000:G:T	rs74457637	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr12	96225021	96225022	chr12:96225022:C:T	rs4762286	C	T	t	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	96668581	96668582	chr12:96668582:G:C	rs75557486	G	C	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr12	96808788	96808789	chr12:96808789:A:G	rs7301455	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	96876337	96876338	chr12:96876338:C:T	rs141381776	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	97299500	97299501	chr12:97299501:A:G	rs10777847	A	G	A	Hoxd3_MA0912.1	3	1	-	9.5344003573126	8.797719134732928	AAGTGCTAATTAAAGT
chr12	97304467	97304468	chr12:97304468:G:A	rs73378691	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr12	97558426	97558427	chr12:97558427:T:C	rs11109107	T	C	T	Hoxd3_MA0912.1	3	1	+	8.561192361736373	7.8245111391567	CTGTGTTAATGATTGT
chr12	97797767	97797768	chr12:97797768:A:G	rs77603330	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr12	98185190	98185191	chr12:98185191:C:T	rs17027872	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr12	98448470	98448471	chr12:98448471:G:A	rs12582253	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	99311608	99311609	chr12:99311609:T:C	rs56129477	T	C	T	Hoxd3_MA0912.1	11	1	-	9.20397216178393	7.418046213602938	TTTGGGTAATTATATT
chr12	99383239	99383240	chr12:99383240:T:C	rs10777976	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	99549952	99549953	chr12:99549953:C:A	rs115917720	C	A	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr12	99915886	99915887	chr12:99915887:C:T	rs61941561	C	T	C	Hoxd3_MA0912.1	3	1	+	9.300084204204024	10.036765426783697	TTGCGTTCATTAACTT
chr12	100231254	100231255	chr12:100231255:G:A	rs116423074	G	A	g	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	100401920	100401921	chr12:100401921:A:G	rs11568544	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr12	100651873	100651874	chr12:100651874:G:A	rs562841126	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	101570302	101570303	chr12:101570303:C:A	rs825038	C	A	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	101855058	101855059	chr12:101855059:A:G	rs7138845	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	101909283	101909284	chr12:101909284:A:G	rs61936577	A	G	a	Hoxd3_MA0912.1	33	0	-	0	0	.
chr12	101909307	101909308	chr12:101909308:A:G	rs6539019	A	G	G	Hoxd3_MA0912.1	9	1	-	8.9810557917897	2.0924833322243375	TTGATCTAATTAGACA
chr12	102406295	102406296	chr12:102406296:G:A	rs5742691	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr12	102465049	102465050	chr12:102465050:G:C	rs12423791	G	C	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	102653044	102653045	chr12:102653045:T:G	rs7312112	T	G	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr12	102814891	102814892	chr12:102814892:G:A	rs75517211	G	A	g	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr12	103677744	103677745	chr12:103677745:T:C	rs1593809	T	C	T	Hoxd3_MA0912.1	12	1	-	7.908676247941416	6.941154017002384	TTGTGGCAATGAACCC
chr12	104162942	104162943	chr12:104162943:G:C	rs11829709	G	C	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	104286882	104286883	chr12:104286883:G:T	rs10735393	G	T	T	Hoxd3_MA0912.1	15	1	-	7.627415292773837	6.7401120977729345	CTATGCTAATTGCCTC
chr12	104339625	104339626	chr12:104339626:T:C	rs34015677	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	104396069	104396070	chr12:104396070:T:C	rs7962470	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	104579929	104579930	chr12:104579930:G:A	rs2665742	G	A	A	Hoxd3_MA0912.1	14	1	+	12.796362071527396	11.852396741763263	CTGGGTTAATTACCGT
chr12	104750084	104750085	chr12:104750085:G:A	rs75020561	G	A	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr12	104801231	104801232	chr12:104801232:G:A	rs2453158	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	104930308	104930309	chr12:104930309:C:T	rs138064574	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	105064773	105064774	chr12:105064774:C:T	rs117445550	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr12	105393668	105393669	chr12:105393669:A:T	rs113899768	A	T	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr12	105821056	105821057	chr12:105821057:G:A	rs184305376	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr12	105987437	105987438	chr12:105987438:C:T	rs2436607	C	T	T	Hoxd3_MA0912.1	0	1	+	8.417559671486964	8.470065168864894	CTGAGGCCATTACTGT
chr12	106506979	106506980	chr12:106506980:G:A	rs3851635	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	106581078	106581079	chr12:106581079:G:A	rs117734201	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	106649524	106649525	chr12:106649525:C:T	rs10861642	C	T	T	Hoxd3_MA0912.1	3	1	-	10.386211502824152	10.500309253863175	CTGGGCTAATTAAACA
chr12	107134665	107134666	chr12:107134666:C:T	rs61942423	C	T	c	Hoxd3_MA0912.1	21	0	+	0	0	.
chr12	107222053	107222054	chr12:107222054:A:G	rs17039104	A	G	A	Hoxd3_MA0912.1	8	1	+	8.339698416599166	1.4511259570338049	CTGTATTCATTAAAGG
chr12	107513402	107513403	chr12:107513403:T:C	rs55744167	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr12	107642454	107642455	chr12:107642455:A:G	rs1420740	A	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	107642481	107642482	chr12:107642482:T:C	rs1420739	T	C	T	Hoxd3_MA0912.1	15	1	+	8.42508019072248	7.647375622134472	ATTGGTCAATTACAGT
chr12	107907010	107907011	chr12:107907011:G:A	rs12582286	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	108073954	108073955	chr12:108073955:C:T	rs61938025	C	T	C	Hoxd3_MA0912.1	15	1	+	9.257309060415093	10.035013629003101	CTGTTGTAATTAAGGC
chr12	108215696	108215697	chr12:108215697:G:C	rs1544885	G	C	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr12	108382642	108382643	chr12:108382643:G:T	rs4964684	G	T	G	Hoxd3_MA0912.1	6	1	-	6.362098507308202	3.8103333943951543	CTGGGGCAATGAGGGT
chr12	108508549	108508550	chr12:108508550:C:T	rs575710034	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	108538002	108538003	chr12:108538003:C:A	rs2287550	C	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	108692085	108692086	chr12:108692086:C:T	rs139887547	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	108833810	108833811	chr12:108833811:A:G	rs79733689	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	108833834	108833835	chr12:108833835:G:A	rs76123001	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	108935522	108935523	chr12:108935523:A:G	rs4964776	A	G	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr12	108935541	108935542	chr12:108935542:T:C	rs4964777	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	108940226	108940227	chr12:108940227:C:T	rs74193321	C	T	C	Hoxd3_MA0912.1	13	1	+	7.779156578839498	7.174919850327123	TTGTGGTATTTACCGT
chr12	109211691	109211692	chr12:109211692:C:T	rs11615824	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr12	109244174	109244175	chr12:109244175:G:A	rs914313493	G	A	G	Hoxd3_MA0912.1	13	1	-	8.296746108031916	7.692509379519542	TTGGTTTCATGAACGT
chr12	109259990	109259991	chr12:109259991:A:G	rs2075261	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	109462790	109462791	chr12:109462791:C:T	rs4766473	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	109512847	109512848	chr12:109512848:G:A	rs2287190	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr12	109716352	109716353	chr12:109716353:G:A	rs824998	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr12	109720815	109720816	chr12:109720816:T:C	rs11831476	T	C	C	Hoxd3_MA0912.1	7	1	-	9.882618614121935	3.1029353714915073	TTGTGGCAATTAACCC
chr12	109973436	109973437	chr12:109973437:G:T	rs111862438	G	T	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	110013319	110013320	chr12:110013320:A:T	rs12300179	A	T	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr12	110301441	110301442	chr12:110301442:A:C	rs939521509	A	C	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	110896513	110896514	chr12:110896514:A:G	rs6489821	A	G	G	Hoxd3_MA0912.1	3	1	+	8.281318777414826	8.167221026375802	TTGAGATCATTATCCG
chr12	111685364	111685365	chr12:111685365:G:C	rs58580157	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr12	111976558	111976559	chr12:111976559:C:T	rs73426393	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr12	112599012	112599013	chr12:112599013:A:G	rs17824050	A	G	G	Hoxd3_MA0912.1	1	1	+	8.04311505056507	7.185290777190881	CACCAGTAATTAACCT
chr12	112843499	112843500	chr12:112843500:A:G	rs3803060	A	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr12	112904356	112904357	chr12:112904357:A:G	rs10774670	A	G	A	Hoxd3_MA0912.1	7	1	+	9.996319340893278	3.2166360982628506	CTGTTCTAATTACTGG
chr12	113001762	113001763	chr12:113001763:C:T	rs2525849	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	113059023	113059024	chr12:113059024:T:G	rs1674089	T	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	113059026	113059027	chr12:113059027:G:A	rs34145403	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr12	113059813	113059814	chr12:113059814:T:A	rs731570	T	A	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr12	113071822	113071823	chr12:113071823:C:T	rs10744794	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	113120923	113120924	chr12:113120924:G:C	rs78888236	G	C	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	113230132	113230133	chr12:113230133:C:G	chr12:113230133:C:G	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr12	113697966	113697967	chr12:113697967:C:T	rs111329535	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	113697993	113697994	chr12:113697994:C:T	rs10774711	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	113745086	113745087	chr12:113745087:G:A	rs2042726	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr12	114022761	114022762	chr12:114022762:T:C	rs12297947	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	114052137	114052138	chr12:114052138:G:C	rs7358632	G	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr12	114240159	114240160	chr12:114240160:C:T	rs187583137	C	T	C	Hoxd3_MA0912.1	5	1	-	9.247067731908041	8.522504355114718	CTGGTGTAATTGTCCT
chr12	114288176	114288177	chr12:114288177:T:C	rs61932437	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	114410639	114410640	chr12:114410640:T:C	rs55727648	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr12	114430867	114430868	chr12:114430868:C:T	rs7972393	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr12	114449887	114449888	chr12:114449888:A:C	rs35239294	A	C	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr12	114449924	114449925	chr12:114449925:T:C	rs16944310	T	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr12	114492471	114492472	chr12:114492472:G:C	rs10850347	G	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr12	114799938	114799939	chr12:114799939:G:A	rs79100332	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr12	114799942	114799943	chr12:114799943:G:A	rs4767269	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	114799981	114799982	chr12:114799982:A:G	rs76943946	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr12	114841804	114841805	chr12:114841805:T:C	rs7978393	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	114984802	114984803	chr12:114984803:T:C	rs7139041	T	C	C	Hoxd3_MA0912.1	11	1	-	9.53143731099203	7.745511362811039	CTTAAATAATTAATGT
chr12	114984813	114984814	chr12:114984814:G:A	rs7304645	G	A	G	Hoxd3_MA0912.1	0	1	-	9.53143731099203	9.583942808369962	CTTAAATAATTAATGT
chr12	115205674	115205675	chr12:115205675:A:G	rs7974488	A	G	A	Hoxd3_MA0912.1	8	1	+	8.21093919622262	1.322366736657258	TTGTGTCAATGACTCT
chr12	115262320	115262321	chr12:115262321:C:T	rs17692830	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	115486287	115486288	chr12:115486288:C:T	rs4767325	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	115486316	115486317	chr12:115486317:T:A	rs73206280	T	A	T	Hoxd3_MA0912.1	1	1	-	9.027058035455353	10.253294249617293	CAGTTTTAATTAACCA
chr12	115860807	115860808	chr12:115860808:C:T	rs2575286	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	115870716	115870717	chr12:115870717:G:T	rs111491472	G	T	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	115870735	115870736	chr12:115870736:T:A	rs111911731	T	A	T	Hoxd3_MA0912.1	4	1	+	8.717187049687231	8.717187049687231	CAGGTATAATTAGACT
chr12	115870896	115870897	chr12:115870897:G:A	rs74577752	G	A	g	Hoxd3_MA0912.1	12	1	-	8.035316095959521	6.828564175954657	CTAGTGTAATGACAGT
chr12	115922277	115922278	chr12:115922278:T:G	rs112468579	T	G	T	Hoxd3_MA0912.1	10	1	+	7.934631512686383	5.960689146505864	GTGAGTCAATTAAACC
chr12	116217690	116217691	chr12:116217691:T:C	rs61935854	T	C	C	Hoxd3_MA0912.1	14	1	+	9.506085433181042	10.070421879313333	CTTATCTAATTACCTC
chr12	116280931	116280932	chr12:116280932:C:G	rs2392972	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr12	116370996	116370997	chr12:116370997:G:A	rs193047514	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	117156596	117156597	chr12:117156597:G:A	rs114534977	G	A	G	Hoxd3_MA0912.1	13	1	-	10.232731554758393	9.628494826246019	CTGGGTTAATTGACGC
chr12	117159861	117159862	chr12:117159862:G:C	rs141317312	G	C	G	Hoxd3_MA0912.1	14	1	-	9.605675418443209	9.42926005315876	TGGGGGTAATTATCCT
chr12	117262241	117262242	chr12:117262242:T:C	rs2682819	T	C	C	Hoxd3_MA0912.1	6	1	+	9.345329827579231	7.559403879398241	ATAGTGTAATTAATGT
chr12	117294533	117294534	chr12:117294534:A:G	rs532967	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	117439201	117439202	chr12:117439202:A:G	rs4767540	A	G	G	Hoxd3_MA0912.1	10	1	-	7.138811231770886	0.35912798914045857	CTGCCCTCATTACCCC
chr12	117680318	117680319	chr12:117680319:A:G	rs7960466	A	G	A	Hoxd3_MA0912.1	4	1	-	9.509508864443504	8.535667682242796	TTGCTTTAATTAAAAT
chr12	117723044	117723045	chr12:117723045:T:C	rs9651908	T	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	118139488	118139489	chr12:118139489:A:G	rs55716409	A	G	A	Hoxd3_MA0912.1	9	1	-	8.59397503677141	1.7054025772060477	CTGATGTCATTGCCCT
chr12	118393152	118393153	chr12:118393153:A:G	rs521048	A	G	G	Hoxd3_MA0912.1	5	1	-	9.182538848838792	8.865217406952384	AAATGTTAATTACCCT
chr12	118750140	118750141	chr12:118750141:A:G	rs11836583	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	118901523	118901524	chr12:118901524:G:A	rs11069159	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr12	119181969	119181970	chr12:119181970:G:T	rs75265571	G	T	G	Hoxd3_MA0912.1	14	1	+	9.248792003647571	8.860870922799728	TTGTTTTAATTAGGGT
chr12	119303448	119303449	chr12:119303449:C:T	rs75268689	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr12	119500325	119500326	chr12:119500326:A:G	rs474748	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	119664447	119664448	chr12:119664448:T:C	rs1978108	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	119789118	119789119	chr12:119789119:A:G	rs407692	A	G	A	Hoxd3_MA0912.1	15	1	-	9.124953551706096	8.347248983118087	CTGATTTAATTGGTCT
chr12	120195981	120195982	chr12:120195982:T:C	rs143354650	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr12	120498053	120498054	chr12:120498054:T:G	rs188270446	T	G	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr12	120538505	120538506	chr12:120538506:C:T	rs571036511	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr12	120600476	120600477	chr12:120600477:A:C	rs10774561	A	C	A	Hoxd3_MA0912.1	8	1	+	9.533236245984808	5.042559059217815	TTTTTTTAATTACCAT
chr12	120945697	120945698	chr12:120945698:C:T	rs11065357	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr12	121592663	121592664	chr12:121592664:C:T	rs28409019	C	T	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr12	121721130	121721131	chr12:121721131:A:G	rs2720027	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr12	122116255	122116256	chr12:122116256:A:T	rs28529535	A	T	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	122197738	122197739	chr12:122197739:G:A	rs11060556	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr12	122321691	122321692	chr12:122321692:T:C	rs11057514	T	C	T	Hoxd3_MA0912.1	15	1	+	8.12136674693756	7.343662178349552	CCCAGCTAATTACTGT
chr12	122368407	122368408	chr12:122368408:T:C	rs944446247	T	C	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr12	123374304	123374305	chr12:123374305:G:A	rs117560412	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr12	123696852	123696853	chr12:123696853:G:A	rs114141911	G	A	G	Hoxd3_MA0912.1	13	1	+	7.924421745049074	8.898262927249782	CAGTGGTAATTACGCA
chr12	123710381	123710382	chr12:123710382:C:T	rs2222061	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr12	123795773	123795774	chr12:123795774:C:A	rs1114629	C	A	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr12	124182344	124182345	chr12:124182345:T:C	rs10773066	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	124194867	124194868	chr12:124194868:C:G	rs11057501	C	G	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	124388040	124388041	chr12:124388041:T:C	rs2660369	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr12	124802669	124802670	chr12:124802670:A:C	rs989892	A	C	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr12	124884278	124884279	chr12:124884279:A:C	rs60832006	A	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr12	124922009	124922010	chr12:124922010:A:C	chr12:124922010:A:C	A	C	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	125056538	125056539	chr12:125056539:T:C	rs28388870	T	C	t	Hoxd3_MA0912.1	7	1	-	8.760086330681798	1.9804030880513703	CTTGGCTAATGAAACT
chr12	125272061	125272062	chr12:125272062:G:C	rs58918323	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr12	125486820	125486821	chr12:125486821:G:A	rs4765043	G	A	A	Hoxd3_MA0912.1	14	1	+	10.274668103895845	9.330702774131712	TGGATTTAATTACCGT
chr12	126030576	126030577	chr12:126030577:C:T	rs79563322	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	126231711	126231712	chr12:126231712:C:A	rs35464092	C	A	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr12	126469930	126469931	chr12:126469931:C:T	rs12296549	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	127174006	127174007	chr12:127174007:C:T	rs2012854	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	127191448	127191449	chr12:127191449:G:T	rs534368302	G	T	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr12	127191491	127191492	chr12:127191492:A:C	rs12582630	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	127289793	127289794	chr12:127289794:T:C	rs10744302	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr12	127451364	127451365	chr12:127451365:C:T	rs7978812	C	T	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr12	127662043	127662044	chr12:127662044:A:G	rs1910311	A	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	127861671	127861672	chr12:127861672:C:T	rs12322635	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr12	128058645	128058646	chr12:128058646:T:C	rs10847503	T	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr12	128066230	128066231	chr12:128066231:A:G	rs11059473	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr12	128078945	128078946	chr12:128078946:A:G	rs9669200	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr12	128444991	128444992	chr12:128444992:T:C	rs981365541	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr12	128525462	128525463	chr12:128525463:C:T	rs7306842	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	128944612	128944613	chr12:128944613:G:A	rs7969314	G	A	g	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr12	129029003	129029004	chr12:129029004:A:G	rs1425665248	A	G	A	Hoxd3_MA0912.1	15	1	-	8.394962939318312	7.617258370730304	CCGAGATAATTACGGT
chr12	129128312	129128313	chr12:129128313:T:G	rs2017724	T	G	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr12	129425774	129425775	chr12:129425775:C:T	rs11060336	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	129425779	129425780	chr12:129425780:A:T	rs7313406	A	T	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr12	129535501	129535502	chr12:129535502:A:C	rs7975245	A	C	C	Hoxd3_MA0912.1	11	1	+	8.293678635454505	1.5490424660421747	TTGAGTTCATTATCCA
chr12	129610834	129610835	chr12:129610835:G:A	rs7973346	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr12	129720174	129720175	chr12:129720175:T:C	rs7977471	T	C	T	Hoxd3_MA0912.1	8	1	-	10.874490171439533	3.98591771187417	TTGTTGTAATTAGCCT
chr12	129726716	129726717	chr12:129726717:A:T	rs61945204	A	T	A	Hoxd3_MA0912.1	5	1	-	8.88874717711205	8.035388692113155	TTGGATTCATTACTGC
chr12	129910644	129910645	chr12:129910645:T:C	rs11608679	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	130254242	130254243	chr12:130254243:G:A	rs537667403	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr12	130333190	130333191	chr12:130333191:G:A	rs1466774	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr12	130485871	130485872	chr12:130485872:T:G	rs11060940	T	G	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr12	130636484	130636485	chr12:130636485:A:C	rs7298706	A	C	A	Hoxd3_MA0912.1	10	1	-	7.7605300154913515	5.786587649310832	CTGAGTCAATTGAGGT
chr12	131003662	131003663	chr12:131003663:G:A	rs7315876	G	A	A	Hoxd3_MA0912.1	12	1	-	9.883254308538689	8.676502388533825	CTGTGACAATTACCCT
chr12	131008215	131008216	chr12:131008216:T:C	rs7961468	T	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr12	131116429	131116430	chr12:131116430:A:G	rs181991966	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr12	131296777	131296778	chr12:131296778:C:T	rs59005826	C	T	-	Hoxd3_MA0912.1	12	1	+	7.1196812349838225	5.912929314978959	TTGAGCTCATGACGGT
chr12	131343814	131343815	chr12:131343815:T:C	rs113489571	T	C	t	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr12	131461073	131461074	chr12:131461074:G:A	rs75139840	G	A	g	Hoxd3_MA0912.1	3	1	-	8.269708728009222	9.006389950588897	CTGCGTTAATTAGAAG
chr12	131541597	131541598	chr12:131541598:C:T	rs10744526	C	T	C	Hoxd3_MA0912.1	0	1	-	9.720557460867376	11.04100525618968	GTGAGTTAATTAAACC
chr12	131550383	131550384	chr12:131550384:C:A	rs11246898	C	A	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr12	131597784	131597785	chr12:131597785:C:T	rs4082223	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr12	131624849	131624850	chr12:131624850:T:C	rs1240784724	T	C	T	Hoxd3_MA0912.1	13	1	+	8.670192401922629	9.274429130435003	TTCTGGTAATTAATTG
chr12	131629421	131629422	chr12:131629422:T:C	rs12819224	T	C	C	Hoxd3_MA0912.1	3	1	+	7.653095838958757	6.916414616379084	CTGTACTCATGACCCT
chr12	131629436	131629437	chr12:131629437:T:C	rs12819230	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr12	131785912	131785913	chr12:131785913:T:C	rs4964996	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr12	132186891	132186892	chr12:132186892:G:T	rs11246973	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr12	132306911	132306912	chr12:132306912:G:A	rs28490534	G	A	A	Hoxd3_MA0912.1	13	1	+	9.02247815869257	9.996319340893278	CTGTTCTAATTACGGG
chr12	132309486	132309487	chr12:132309487:C:T	rs28671462	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr12	132363260	132363261	chr12:132363261:G:A	rs77988788	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr12	132389493	132389494	chr12:132389494:G:A	rs71452511	G	A	g	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr12	132471392	132471393	chr12:132471393:A:G	rs34980052	A	G	a	Hoxd3_MA0912.1	25	0	+	0	0	.
chr12	132545344	132545345	chr12:132545345:G:A	rs78410702	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr12	132591663	132591664	chr12:132591664:G:T	rs116893429	G	T	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr12	132612754	132612755	chr12:132612755:G:A	rs4883633	G	A	a	Hoxd3_MA0912.1	30	0	+	0	0	.
chr12	132727539	132727540	chr12:132727540:G:A	rs35235926	G	A	.	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr12	132948128	132948129	chr12:132948129:G:C	rs117419190	G	C	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr13	18594896	18594897	chr13:18594897:A:G	rs4769922	A	G	.	Hoxd3_MA0912.1	9	1	-	8.753593241813372	1.865020782248009	TTTGATTAATTGCCTT
chr13	19061100	19061101	chr13:19061101:C:A	rs58811109	C	A	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr13	19158240	19158241	chr13:19158241:C:A	rs7994217	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr13	19914380	19914381	chr13:19914381:T:C	rs4769917	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr13	20361217	20361218	chr13:20361218:A:G	rs9552153	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr13	20518938	20518939	chr13:20518939:T:G	rs4770048	T	G	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	20538795	20538796	chr13:20538796:G:A	rs9506510	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr13	20715261	20715262	chr13:20715262:G:T	rs41337546	G	T	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	20902143	20902144	chr13:20902144:C:G	rs34962767	C	G	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr13	20904251	20904252	chr13:20904252:C:T	rs61954218	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	21055723	21055724	chr13:21055724:C:T	rs77492046	C	T	C	Hoxd3_MA0912.1	3	1	+	7.225349218970692	7.962030441550365	CTGCGCTAATGACACA
chr13	21115490	21115491	chr13:21115491:G:A	rs4769152	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr13	21176124	21176125	chr13:21176125:G:T	rs2148706	G	T	.	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr13	22030055	22030056	chr13:22030056:A:G	rs2874360	A	G	A	Hoxd3_MA0912.1	13	1	-	8.029003745950366	8.63324047446274	TTGACTTAATGACTGC
chr13	22036573	22036574	chr13:22036574:A:G	rs148507290	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr13	22278598	22278599	chr13:22278599:A:G	rs112095851	A	G	a	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr13	22439503	22439504	chr13:22439504:C:T	rs147832340	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr13	22496330	22496331	chr13:22496331:A:T	rs9510197	A	T	A	Hoxd3_MA0912.1	15	1	-	8.843963611311091	7.178955847722181	TTGCTTTAATTGATCT
chr13	22496359	22496360	chr13:22496360:G:T	rs4271470	G	T	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr13	22653920	22653921	chr13:22653921:T:C	rs2334946	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr13	22846974	22846975	chr13:22846975:G:A	rs61958760	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	23028306	23028307	chr13:23028307:T:G	rs9507002	T	G	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	24239968	24239969	chr13:24239969:A:G	rs9551084	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr13	24282677	24282678	chr13:24282678:G:A	rs73455725	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr13	24282709	24282710	chr13:24282710:C:T	rs12857288	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr13	24282710	24282711	chr13:24282711:G:T	rs9511178	G	T	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	24290918	24290919	chr13:24290919:A:G	rs12430530	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr13	24419898	24419899	chr13:24419899:C:G	rs7317850	C	G	.	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr13	24748314	24748315	chr13:24748315:A:G	rs17081093	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr13	24863753	24863754	chr13:24863754:C:T	rs12427533	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr13	26048945	26048946	chr13:26048946:C:T	rs79283324	C	T	T	Hoxd3_MA0912.1	4	1	+	10.022902660606713	10.99674384280742	CTGTCCTAATTACACT
chr13	26048975	26048976	chr13:26048976:C:T	rs73476647	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr13	26528081	26528082	chr13:26528082:C:T	rs498755	C	T	c	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	26592612	26592613	chr13:26592613:C:A	rs9512278	C	A	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	26757784	26757785	chr13:26757785:A:G	rs9512372	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr13	26941693	26941694	chr13:26941694:C:T	rs12583187	C	T	C	Hoxd3_MA0912.1	3	1	-	9.757107854580472	9.871205605619496	TAGGTCTAATTAACAT
chr13	27276439	27276440	chr13:27276440:C:A	rs17085368	C	A	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	27505636	27505637	chr13:27505637:T:C	rs1218897	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr13	27542421	27542422	chr13:27542422:T:A	rs2057521	T	A	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr13	28559653	28559654	chr13:28559654:C:T	rs59521754	C	T	T	Hoxd3_MA0912.1	5	1	+	9.225655476670266	9.542976918556674	CTGTTCTAATTATTTT
chr13	28842915	28842916	chr13:28842916:C:G	rs7986395	C	G	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr13	29117930	29117931	chr13:29117931:C:A	rs3927511	C	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	29292445	29292446	chr13:29292446:C:T	rs35319210	C	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr13	29508550	29508551	chr13:29508551:G:T	rs2776978	G	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr13	29582179	29582180	chr13:29582180:A:G	rs280936	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	29761987	29761988	chr13:29761988:G:A	rs6490427	G	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr13	29920091	29920092	chr13:29920092:C:G	rs60031463	C	G	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr13	30212900	30212901	chr13:30212901:G:A	rs61946920	G	A	G	Hoxd3_MA0912.1	14	1	+	7.992974159602717	7.0490088298385825	GAGAGGTAATTAAGGT
chr13	30360775	30360776	chr13:30360776:A:C	rs2152945	A	C	A	Hoxd3_MA0912.1	3	1	+	11.26370258095756	9.962684912245594	TTGAGCTAATTACAGC
chr13	30428235	30428236	chr13:30428236:G:A	rs2892546	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	30428926	30428927	chr13:30428927:A:C	rs142820634	A	C	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	30737958	30737959	chr13:30737959:A:T	rs10507391	A	T	A	Hoxd3_MA0912.1	8	1	+	8.924909313000816	4.434232126233824	CAATTCTAATTAACCT
chr13	31037083	31037084	chr13:31037084:C:T	rs9535240	C	T	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr13	31249101	31249102	chr13:31249102:A:G	rs11147458	A	G	A	Hoxd3_MA0912.1	1	1	-	8.18540500199046	6.101344514454332	ATGAGCTCATTACATC
chr13	31416364	31416365	chr13:31416365:C:T	rs187059964	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr13	31970991	31970992	chr13:31970992:G:A	rs404234	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr13	32167522	32167523	chr13:32167523:G:A	rs703218	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	32391172	32391173	chr13:32391173:G:A	rs206340	G	A	G	Hoxd3_MA0912.1	15	1	+	10.994700688147994	10.153702061188778	ATGAGTTAATTAAACG
chr13	32417288	32417289	chr13:32417289:G:A	rs206323	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr13	32590280	32590281	chr13:32590281:G:A	rs3742320	G	A	A	Hoxd3_MA0912.1	14	1	-	8.479915970755986	7.915579524623695	ATCAGGTAATTATCCG
chr13	32669401	32669402	chr13:32669402:C:A	rs9596056	C	A	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr13	32883780	32883781	chr13:32883781:C:T	rs141610235	C	T	C	Hoxd3_MA0912.1	12	1	+	8.141366074184207	6.934614154179343	TTGTCCTCATTACCTT
chr13	33153705	33153706	chr13:33153706:G:C	chr13:33153706:G:C	G	C	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr13	33153744	33153745	chr13:33153745:T:A	rs150255644	T	A	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr13	33194209	33194210	chr13:33194210:C:T	rs797199	C	T	C	Hoxd3_MA0912.1	2	1	-	8.198333981224772	6.748498937067733	CTGTGTTCATTGCCTT
chr13	33195735	33195736	chr13:33195736:G:A	rs114300066	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr13	33204596	33204597	chr13:33204597:A:G	rs190582296	A	G	A	Hoxd3_MA0912.1	13	1	-	8.329102575496691	8.933339304009063	CTGGTCTCATTAGTGT
chr13	33265020	33265021	chr13:33265021:G:T	rs55738907	G	T	G	Hoxd3_MA0912.1	5	1	-	7.36566743907603	6.829630395963544	CTGTGCTCATTAGCAC
chr13	33392932	33392933	chr13:33392933:G:A	rs78149100	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr13	33543202	33543203	chr13:33543203:T:A	rs1002866867	T	A	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr13	33649607	33649608	chr13:33649608:G:A	rs9569991	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	33722372	33722373	chr13:33722373:G:A	rs114134265	G	A	G	Hoxd3_MA0912.1	2	1	+	9.910809201944183	8.460974157787144	ATGGTGTAATTACCCA
chr13	33869226	33869227	chr13:33869227:C:T	rs7986516	C	T	c	Hoxd3_MA0912.1	20	0	+	0	0	.
chr13	33869231	33869232	chr13:33869232:T:C	rs6562150	T	C	c	Hoxd3_MA0912.1	25	0	+	0	0	.
chr13	33994767	33994768	chr13:33994768:C:T	rs189047998	C	T	C	Hoxd3_MA0912.1	1	1	-	7.517626013146954	8.375450286521144	CGGAGCCAATTACACC
chr13	34154715	34154716	chr13:34154716:C:T	rs8181839	C	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr13	34350633	34350634	chr13:34350634:G:A	rs1765857	G	A	A	Hoxd3_MA0912.1	14	1	+	8.197006054705538	7.253040724941406	ATGTGCCAATTAATGC
chr13	34352149	34352150	chr13:34352150:T:C	rs73484286	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr13	34411366	34411367	chr13:34411367:T:C	rs116667197	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr13	34477085	34477086	chr13:34477086:A:G	rs12429727	A	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr13	34708937	34708938	chr13:34708938:A:G	rs1876582	A	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr13	34942867	34942868	chr13:34942868:C:G	rs377255095	C	G	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr13	35476791	35476792	chr13:35476792:C:T	rs879553904	C	T	C	Hoxd3_MA0912.1	1	1	+	7.405979792594975	9.490040280131105	CCCGGCTAATTAATCC
chr13	35481995	35481996	chr13:35481996:A:G	rs17816432	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr13	35593846	35593847	chr13:35593847:T:G	rs78374323	T	G	T	Hoxd3_MA0912.1	7	1	-	8.037480926886456	6.063538560705936	CTTTATTAATTGCCCC
chr13	35593853	35593854	chr13:35593854:G:A	rs12866628	G	A	G	Hoxd3_MA0912.1	0	1	-	8.037480926886456	8.089986424264387	CTTTATTAATTGCCCC
chr13	35713054	35713055	chr13:35713055:C:T	rs79054139	C	T	C	Hoxd3_MA0912.1	13	1	-	7.484113018267795	8.457954200468503	TTGAGCTCATTGCGCT
chr13	35725281	35725282	chr13:35725282:A:G	rs12873895	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	35820798	35820799	chr13:35820799:G:A	rs117552022	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr13	35848551	35848552	chr13:35848552:G:A	rs148519572	G	A	G	Hoxd3_MA0912.1	13	1	-	8.026136991643375	7.4219002631310005	TTGTACTAATTGCCGA
chr13	35882365	35882366	chr13:35882366:T:C	rs9545602	T	C	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr13	37059075	37059076	chr13:37059076:T:C	rs187671653	T	C	T	Hoxd3_MA0912.1	11	1	-	10.816384975250884	9.03045902706989	TTGGATTAATTACTGG
chr13	37171370	37171371	chr13:37171371:T:C	rs2050567	T	C	-	Hoxd3_MA0912.1	23	0	-	0	0	.
chr13	37341587	37341588	chr13:37341588:T:C	rs111410778	T	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr13	37671978	37671979	chr13:37671979:G:C	rs9548011	G	C	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr13	38202911	38202912	chr13:38202912:T:G	rs2460317	T	G	G	Hoxd3_MA0912.1	5	1	+	8.637962922596598	8.509167814391027	TGAAGTTAATTAGCCT
chr13	38686217	38686218	chr13:38686218:G:A	rs139703212	G	A	g	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr13	38686240	38686241	chr13:38686241:G:C	rs113818301	G	C	g	Hoxd3_MA0912.1	21	0	+	0	0	.
chr13	39186602	39186603	chr13:39186603:C:T	rs77271235	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr13	39316069	39316070	chr13:39316070:G:T	rs73465685	G	T	G	Hoxd3_MA0912.1	11	1	+	8.694673928090221	6.142908815177172	CTGTACTAATTGACAT
chr13	39336076	39336077	chr13:39336077:G:A	rs17444970	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	39494201	39494202	chr13:39494202:A:G	rs9603549	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr13	39496745	39496746	chr13:39496746:C:G	rs1927196	C	G	C	Hoxd3_MA0912.1	2	1	-	8.175708476148845	6.392234058454896	GAGATGTAATTAGCCT
chr13	39655447	39655448	chr13:39655448:C:T	rs9548868	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr13	39676022	39676023	chr13:39676023:T:C	rs181814450	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr13	39866172	39866173	chr13:39866173:A:G	rs996546	A	G	G	Hoxd3_MA0912.1	13	1	-	9.113435646681653	9.717672375194027	CAATGGTAATTAATCT
chr13	39910418	39910419	chr13:39910419:A:G	rs9576917	A	G	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr13	40194148	40194149	chr13:40194149:G:A	rs76471930	G	A	G	Hoxd3_MA0912.1	14	1	+	8.352590501344034	7.408625171579902	TCTGGCTAATTACCGC
chr13	40197983	40197984	chr13:40197984:T:C	rs1556749	T	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr13	40284034	40284035	chr13:40284035:T:C	rs6563813	T	C	T	Hoxd3_MA0912.1	0	1	+	10.319737251193427	10.267231753815496	TTGAGCTAATTAAAAC
chr13	40287528	40287529	chr13:40287529:G:A	rs73187514	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr13	40287529	40287530	chr13:40287530:G:A	rs9603714	G	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	40342439	40342440	chr13:40342440:T:C	rs2008104	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr13	40344112	40344113	chr13:40344113:A:G	rs2324597	A	G	A	Hoxd3_MA0912.1	7	1	+	8.78872307182518	2.0090398291947524	CAGATCTAATGAACGT
chr13	40373657	40373658	chr13:40373658:G:A	rs2324601	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	40565906	40565907	chr13:40565907:T:A	rs2180961	T	A	t	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr13	41035374	41035375	chr13:41035375:A:G	rs113826151	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr13	41224352	41224353	chr13:41224353:G:A	rs1042788719	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	41312297	41312298	chr13:41312298:T:G	rs892153683	T	G	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	41502278	41502279	chr13:41502279:T:A	rs348254	T	A	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr13	42182278	42182279	chr13:42182279:T:C	rs9525590	T	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr13	42277363	42277364	chr13:42277364:A:G	rs140170565	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	42399184	42399185	chr13:42399185:A:T	rs35499536	A	T	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr13	42525555	42525556	chr13:42525556:A:G	rs35355882	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr13	42541996	42541997	chr13:42541997:C:T	rs1021188	C	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr13	42650271	42650272	chr13:42650272:A:G	rs7996938	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr13	42905401	42905402	chr13:42905402:A:G	rs1535898	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	43304997	43304998	chr13:43304998:G:A	rs1924634	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	43307914	43307915	chr13:43307915:C:T	rs7319544	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr13	43307916	43307917	chr13:43307917:G:C	rs7319871	G	C	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr13	43461853	43461854	chr13:43461854:C:T	rs1998471	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr13	43520367	43520368	chr13:43520368:A:G	rs9316033	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr13	43655774	43655775	chr13:43655775:T:G	rs17538959	T	G	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr13	43699560	43699561	chr13:43699561:G:A	rs60885954	G	A	G	Hoxd3_MA0912.1	2	1	+	9.936758005154223	8.486922960997186	TTGCTGTAATTACTTT
chr13	43730321	43730322	chr13:43730322:A:C	rs9525830	A	C	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr13	43763432	43763433	chr13:43763433:G:T	rs7321106	G	T	T	Hoxd3_MA0912.1	14	1	+	10.500963880977137	10.113042800129294	ATGATCTAATTACCGG
chr13	43880868	43880869	chr13:43880869:T:G	rs41288329	T	G	T	Hoxd3_MA0912.1	4	1	-	9.001617500523613	8.027776318322905	ACGAAGTAATTACACT
chr13	44159438	44159439	chr13:44159439:A:G	rs7319166	A	G	G	Hoxd3_MA0912.1	9	1	-	8.124595044693066	1.236022585127703	CTGGTATAATTGAAGG
chr13	44377946	44377947	chr13:44377947:G:C	rs4942325	G	C	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	44752158	44752159	chr13:44752159:C:T	rs2181508	C	T	C	Hoxd3_MA0912.1	11	1	-	9.28524647726824	11.071172425449234	CTGGTGTAATTGCATT
chr13	45120176	45120177	chr13:45120177:G:T	rs118131446	G	T	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr13	45417593	45417594	chr13:45417594:G:T	rs73183459	G	T	.	Hoxd3_MA0912.1	2	1	-	11.126985404872471	11.46062477840938	CTCAGTTAATTAACGT
chr13	45467220	45467221	chr13:45467221:A:G	rs3887905	A	G	.	Hoxd3_MA0912.1	21	0	-	0	0	.
chr13	45809155	45809156	chr13:45809156:A:G	rs9534222	A	G	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr13	45809176	45809177	chr13:45809177:C:G	rs9534223	C	G	G	Hoxd3_MA0912.1	5	1	-	9.290627115781268	9.10210078210043	CTTAGGCAATTACCTT
chr13	45879316	45879317	chr13:45879317:C:A	rs73179218	C	A	C	Hoxd3_MA0912.1	3	1	-	8.650707939784272	8.200469244691005	GTGGAGTAATTAATGG
chr13	45936378	45936379	chr13:45936379:G:C	rs2573264	G	C	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	46107986	46107987	chr13:46107987:T:C	rs1326397	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr13	46113839	46113840	chr13:46113840:C:G	chr13:46113840:C:G	C	G	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr13	46195479	46195480	chr13:46195480:G:A	rs9534348	G	A	A	Hoxd3_MA0912.1	3	1	+	8.182499577750235	8.296597328789257	TTGGGGCAATGACCGC
chr13	46531266	46531267	chr13:46531267:C:T	rs9534421	C	T	T	Hoxd3_MA0912.1	15	1	+	8.267293505216053	9.044998073804061	TGTTGGTAATTAACCC
chr13	47080909	47080910	chr13:47080910:C:G	rs190220258	C	G	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr13	47154288	47154289	chr13:47154289:G:T	rs187055071	G	T	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr13	47523675	47523676	chr13:47523676:G:T	rs2478314	G	T	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr13	47673236	47673237	chr13:47673237:T:C	rs7329528	T	C	T	Hoxd3_MA0912.1	9	1	+	9.989609809965424	3.1010373504000612	TTGGCATAATTAAACT
chr13	48186684	48186685	chr13:48186685:G:A	rs7989671	G	A	A	Hoxd3_MA0912.1	14	1	-	9.662367328553055	9.098030882420764	TTGCATTAATTAGACT
chr13	48232348	48232349	chr13:48232349:G:A	chr13:48232349:G:A	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr13	48232373	48232374	chr13:48232374:G:A	rs3809328	G	A	A	Hoxd3_MA0912.1	0	1	-	9.031263059161562	9.083768556539493	CTGCGTTCATTACTGT
chr13	48593606	48593607	chr13:48593607:T:G	rs11148110	T	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr13	48621639	48621640	chr13:48621640:G:A	rs8001736	G	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	48658461	48658462	chr13:48658462:T:G	rs1359107	T	G	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr13	48791789	48791790	chr13:48791790:G:C	rs9596008	G	C	G	Hoxd3_MA0912.1	3	1	+	8.235997850907957	7.049077933235015	CAGGTTCAATTACCAT
chr13	48791807	48791808	chr13:48791808:T:G	rs17072243	T	G	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr13	48874030	48874031	chr13:48874031:G:C	rs9316420	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	48999762	48999763	chr13:48999763:G:A	rs3012136	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	49184008	49184009	chr13:49184009:A:G	rs35018425	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr13	49869541	49869542	chr13:49869542:T:C	rs9526615	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr13	50510036	50510037	chr13:50510037:T:G	rs1753637	T	G	G	Hoxd3_MA0912.1	10	1	+	9.18528521333937	7.211342847158848	TTAGGTTAATTGCACT
chr13	50523201	50523202	chr13:50523202:G:C	rs758421323	G	C	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr13	50526577	50526578	chr13:50526578:A:C	rs279075	A	C	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr13	50683379	50683380	chr13:50683380:C:T	rs9591347	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr13	50766178	50766179	chr13:50766179:A:G	rs592333	A	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr13	50830271	50830272	chr13:50830272:T:C	rs74078462	T	C	T	Hoxd3_MA0912.1	0	1	+	8.5722830654904	8.51977756811247	TTGGGGTAATGGCCTT
chr13	51141575	51141576	chr13:51141576:G:C	rs12873258	G	C	G	Hoxd3_MA0912.1	13	1	-	6.419581966260645	4.841504055547562	CTGACCTCATGACCCG
chr13	51192230	51192231	chr13:51192231:T:C	rs9535614	T	C	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr13	51269209	51269210	chr13:51269210:T:C	rs17790739	T	C	T	Hoxd3_MA0912.1	10	1	+	10.301569133810132	3.5218858911797044	ATGATGTAATTACCTG
chr13	51357016	51357017	chr13:51357017:G:A	rs10454626	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr13	51495403	51495404	chr13:51495404:G:A	rs17595873	G	A	g	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr13	52713988	52713989	chr13:52713989:C:T	chr13:52713989:C:T	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr13	52899543	52899544	chr13:52899544:T:C	rs912091	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	53080358	53080359	chr13:53080359:C:T	rs77306542	C	T	T	Hoxd3_MA0912.1	12	1	+	8.41878723369053	7.212035313685666	TTGTTTTAATGACGCT
chr13	53327974	53327975	chr13:53327975:A:G	rs9536394	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	53327998	53327999	chr13:53327999:G:A	rs9536395	G	A	G	Hoxd3_MA0912.1	13	1	-	8.769988196492452	8.165751467980078	CATGGCTAATTACCTC
chr13	53405791	53405792	chr13:53405792:G:A	rs115847515	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr13	54230641	54230642	chr13:54230642:C:T	rs17667588	C	T	C	Hoxd3_MA0912.1	13	1	+	8.882829806624548	8.278593078112173	CTGTGATAATTGCCGG
chr13	54536083	54536084	chr13:54536084:G:A	rs2409103	G	A	g	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr13	54573496	54573497	chr13:54573497:G:A	rs9536765	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr13	57489232	57489233	chr13:57489233:T:G	rs1409244	T	G	T	Hoxd3_MA0912.1	1	1	+	9.037028237538971	6.952967750002843	ATGGGCTAATTGCTTT
chr13	58143861	58143862	chr13:58143862:G:C	rs1962922	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr13	58205590	58205591	chr13:58205591:G:C	rs17191616	G	C	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr13	58419550	58419551	chr13:58419551:G:A	rs78684255	G	A	G	Hoxd3_MA0912.1	5	1	-	8.010498202888476	8.327819644774884	TTGCACTAATTGCCAT
chr13	58476365	58476366	chr13:58476366:G:T	rs2065217	G	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr13	58930409	58930410	chr13:58930410:C:T	rs1417313	C	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr13	59120387	59120388	chr13:59120388:A:G	rs7992721	A	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr13	59285033	59285034	chr13:59285034:A:G	rs9570082	A	G	G	Hoxd3_MA0912.1	15	1	-	9.843354026158607	9.065649457570599	CTGAAATAATTGCCCT
chr13	59360398	59360399	chr13:59360399:G:A	rs115231544	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr13	59750042	59750043	chr13:59750043:T:C	rs80074622	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr13	59810676	59810677	chr13:59810677:A:C	rs75685443	A	C	A	Hoxd3_MA0912.1	15	1	+	9.258952216352931	10.146255411353833	ATGGTTTAATTACAGA
chr13	59922216	59922217	chr13:59922217:T:C	rs2780633	T	C	C	Hoxd3_MA0912.1	3	1	-	8.088359317519638	7.974261566480616	CTTACCTAATTGCCCT
chr13	60165278	60165279	chr13:60165279:A:G	rs4547237	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr13	60355557	60355558	chr13:60355558:C:T	rs9317116	C	T	T	Hoxd3_MA0912.1	3	1	+	7.998734371166785	8.735415593746458	ATGCTGTAATTGCACT
chr13	60617387	60617388	chr13:60617388:A:G	rs9528170	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr13	60652896	60652897	chr13:60652897:A:T	rs6562114	A	T	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr13	61247262	61247263	chr13:61247263:A:C	rs75799001	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr13	61846349	61846350	chr13:61846350:T:A	rs9539334	T	A	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr13	62094621	62094622	chr13:62094622:A:T	rs308595	A	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr13	62451686	62451687	chr13:62451687:G:C	rs35897358	G	C	G	Hoxd3_MA0912.1	7	1	-	8.794045104492458	3.9883042280425496	TTAAGCTCATTAAACT
chr13	62663988	62663989	chr13:62663989:G:A	rs2649154	G	A	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr13	62839636	62839637	chr13:62839637:A:T	rs1521251	A	T	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	63026003	63026004	chr13:63026004:G:A	rs10161561	G	A	g	Hoxd3_MA0912.1	2	1	+	7.818027933242332	6.368192889085293	TCGGAGCAATTACACT
chr13	63436441	63436442	chr13:63436442:G:A	rs61025899	G	A	g	Hoxd3_MA0912.1	22	0	-	0	0	.
chr13	63436450	63436451	chr13:63436451:G:C	rs140013083	G	C	g	Hoxd3_MA0912.1	13	1	-	7.191323457325025	5.613245546611942	CAGAAGTCATTGCCGT
chr13	63438303	63438304	chr13:63438304:C:T	rs643438	C	T	t	Hoxd3_MA0912.1	4	1	-	9.31902434027381	8.714787611761436	GTCAGTTAATTACCCT
chr13	64152142	64152143	chr13:64152143:A:G	rs4406947	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr13	64553808	64553809	chr13:64553809:A:T	rs12874888	A	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr13	64556420	64556421	chr13:64556421:A:C	rs9528783	A	C	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr13	64705386	64705387	chr13:64705387:A:G	rs7982260	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr13	64705429	64705430	chr13:64705430:A:C	rs7982287	A	C	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	64771231	64771232	chr13:64771232:C:A	rs111364681	C	A	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr13	65945258	65945259	chr13:65945259:T:C	rs9529003	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr13	66047553	66047554	chr13:66047554:T:G	rs578616	T	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	66529115	66529116	chr13:66529116:T:C	rs75857427	T	C	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr13	66532103	66532104	chr13:66532104:T:A	rs34979741	T	A	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	67044731	67044732	chr13:67044732:G:T	rs74888619	G	T	G	Hoxd3_MA0912.1	0	1	-	9.417339559953009	8.753410925392203	CTTGAATAATTAATGT
chr13	67299831	67299832	chr13:67299832:C:T	rs2991387	C	T	T	Hoxd3_MA0912.1	4	1	-	10.076878884332844	9.47264215582047	CTGTGTTAATTAAAGA
chr13	67547194	67547195	chr13:67547195:C:A	rs7981119	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr13	67792572	67792573	chr13:67792573:G:A	rs8000931	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	68028349	68028350	chr13:68028350:C:T	rs12873556	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	68837131	68837132	chr13:68837132:T:C	chr13:68837132:T:C	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr13	69734100	69734101	chr13:69734101:T:C	rs79590717	T	C	T	Hoxd3_MA0912.1	0	1	-	7.96391668392157	6.643468888599266	ATGACCCAATTACCCC
chr13	70391836	70391837	chr13:70391837:G:C	rs79054124	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr13	70437023	70437024	chr13:70437024:A:T	rs9572444	A	T	A	Hoxd3_MA0912.1	1	1	-	9.089855551928723	7.863619337766786	TTGAGCTAATTGAATC
chr13	70724103	70724104	chr13:70724104:C:T	rs615018	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	71026484	71026485	chr13:71026485:A:C	rs7991801	A	C	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr13	72255494	72255495	chr13:72255495:A:G	rs17089105	A	G	A	Hoxd3_MA0912.1	8	1	+	9.390296332341963	2.5017238727766	ATCAGGTAATTACCAT
chr13	72823849	72823850	chr13:72823850:G:C	rs9285282	G	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr13	72960872	72960873	chr13:72960873:T:G	rs74853146	T	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr13	72960883	72960884	chr13:72960884:A:G	rs148228080	A	G	A	Hoxd3_MA0912.1	12	1	-	9.265564415445024	10.472316335449888	CTTTGGTAATTATTCT
chr13	73070498	73070499	chr13:73070499:G:C	rs147180985	G	C	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr13	73119646	73119647	chr13:73119647:C:T	rs2483181	C	T	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr13	73274117	73274118	chr13:73274118:G:T	rs9543304	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	73467430	73467431	chr13:73467431:G:A	rs79672810	G	A	A	Hoxd3_MA0912.1	2	1	+	9.069522365914843	7.619687321757803	CTGGAATAATTACTGA
chr13	73689530	73689531	chr13:73689531:C:A	rs41300576	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr13	73851090	73851091	chr13:73851091:G:T	rs9543476	G	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr13	73934744	73934745	chr13:73934745:G:A	rs76976492	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr13	73973229	73973230	chr13:73973230:G:T	rs9600201	G	T	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	74146004	74146005	chr13:74146005:G:A	rs4369536	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	74630034	74630035	chr13:74630035:G:A	rs1359690	G	A	G	Hoxd3_MA0912.1	10	1	+	8.08214408801705	3.276403211567141	TTGAGGCAATGACATT
chr13	74696024	74696025	chr13:74696025:A:G	rs7333621	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr13	74819592	74819593	chr13:74819593:A:T	rs4310742	A	T	T	Hoxd3_MA0912.1	12	1	+	9.19426917735649	7.987517257351627	CTGGTTTAATTGACTG
chr13	74871469	74871470	chr13:74871470:A:G	rs1536233	A	G	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr13	75218159	75218160	chr13:75218160:A:C	rs181900949	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	75263993	75263994	chr13:75263994:T:A	chr13:75263994:T:A	T	A	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	75330705	75330706	chr13:75330706:A:G	rs7991659	A	G	A	Hoxd3_MA0912.1	1	1	+	9.178465754084382	8.32064148071019	TAAAGCTAATTAGCCT
chr13	75357846	75357847	chr13:75357847:G:T	rs9530423	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr13	75629710	75629711	chr13:75629711:G:A	rs12427755	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr13	75705110	75705111	chr13:75705111:T:C	rs73225951	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr13	76266646	76266647	chr13:76266647:C:T	rs885421	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	76631233	76631234	chr13:76631234:G:A	rs7987795	G	A	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr13	76631238	76631239	chr13:76631239:A:T	rs7987356	A	T	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr13	76632088	76632089	chr13:76632089:T:A	rs4142424	T	A	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr13	76762800	76762801	chr13:76762801:G:A	rs17250584	G	A	G	Hoxd3_MA0912.1	0	1	-	9.90778868984032	9.96029418721825	CCGAGCTAATTAACCC
chr13	77323355	77323356	chr13:77323356:T:C	rs75199997	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr13	77429801	77429802	chr13:77429802:G:T	rs111931193	G	T	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr13	77429815	77429816	chr13:77429816:A:C	rs2209846	A	C	A	Hoxd3_MA0912.1	8	1	+	8.690742861876394	4.200065675109403	ATGATTCAATTACCTC
chr13	78022708	78022709	chr13:78022709:G:C	rs3897884	G	C	G	Hoxd3_MA0912.1	14	1	+	8.974710623293547	9.151125988577995	ATGTGCCAATTACTGT
chr13	78145387	78145388	chr13:78145388:G:A	rs10507879	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr13	78372645	78372646	chr13:78372646:G:A	rs73228841	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	78372656	78372657	chr13:78372657:G:T	rs189986887	G	T	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	78484771	78484772	chr13:78484772:C:A	rs2876732	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr13	78540118	78540119	chr13:78540119:T:C	rs7992867	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr13	78609243	78609244	chr13:78609244:T:C	rs1555813	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr13	78779845	78779846	chr13:78779846:T:C	rs9318581	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr13	79157296	79157297	chr13:79157297:G:A	rs140547900	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr13	79270130	79270131	chr13:79270131:G:A	rs115067786	G	A	G	Hoxd3_MA0912.1	2	1	+	9.06641833461581	7.616583290458771	GTGGGCTAATTACTGG
chr13	79270134	79270135	chr13:79270135:T:C	rs58277975	T	C	T	Hoxd3_MA0912.1	6	1	+	9.06641833461581	7.280492386434818	GTGGGCTAATTACTGG
chr13	80277251	80277252	chr13:80277252:T:C	rs117883420	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	80290908	80290909	chr13:80290909:G:A	rs76166597	G	A	G	Hoxd3_MA0912.1	5	1	-	9.155950786149235	9.473272228035643	CTTGCCTAATTACTCT
chr13	80742205	80742206	chr13:80742206:G:T	rs550626439	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr13	81048279	81048280	chr13:81048280:C:T	rs139972330	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	81224286	81224287	chr13:81224287:T:C	rs9574791	T	C	T	Hoxd3_MA0912.1	6	1	+	11.366570782071758	9.580644833890766	TTGTTTTAATTAAACT
chr13	81314708	81314709	chr13:81314709:T:C	rs1757432	T	C	C	Hoxd3_MA0912.1	4	1	-	7.572653048042461	8.176889776554836	CTGGAGTACTTAACGT
chr13	81551224	81551225	chr13:81551225:C:T	rs9545779	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr13	81834190	81834191	chr13:81834191:A:G	rs9545879	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr13	82419815	82419816	chr13:82419816:T:C	rs2225782	T	C	C	Hoxd3_MA0912.1	6	1	+	10.95706604600334	9.171140097822349	TTGACTTAATTAAACT
chr13	82470328	82470329	chr13:82470329:C:G	rs9546128	C	G	c	Hoxd3_MA0912.1	12	1	+	8.1835046543778	7.215982423438771	TTGGTCTCATTACTTC
chr13	83073418	83073419	chr13:83073419:G:A	rs9602062	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr13	83073637	83073638	chr13:83073638:A:G	rs9602063	A	G	A	Hoxd3_MA0912.1	7	1	+	8.71233608127439	1.9326528386439628	GTGAGTCAATTAAACT
chr13	83716018	83716019	chr13:83716019:C:A	rs9546492	C	A	C	Hoxd3_MA0912.1	1	1	+	8.136866698237679	8.99469097161187	CCGATCTAATTACCAG
chr13	83877854	83877855	chr13:83877855:A:T	rs41557622	A	T	A	Hoxd3_MA0912.1	5	1	-	9.407176993815131	8.553818508816237	TTGATTTAATTGACTC
chr13	83914683	83914684	chr13:83914684:C:T	rs9318993	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr13	83914716	83914717	chr13:83914717:T:C	rs9318994	T	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr13	84358848	84358849	chr13:84358849:A:G	rs12586043	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr13	84439305	84439306	chr13:84439306:T:A	rs75331438	T	A	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	84920100	84920101	chr13:84920101:G:A	rs7322312	G	A	g	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr13	84978415	84978416	chr13:84978416:A:C	rs2496757	A	C	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr13	85168998	85168999	chr13:85168999:T:C	rs17348373	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr13	85186383	85186384	chr13:85186384:C:T	rs902285	C	T	T	Hoxd3_MA0912.1	5	1	+	8.995377548054933	9.31269898994134	TTTCTCTAATTACTCT
chr13	85313414	85313415	chr13:85313415:C:G	rs1175965	C	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr13	85379949	85379950	chr13:85379950:A:G	rs7990259	A	G	A	Hoxd3_MA0912.1	10	1	-	8.963802890380544	2.1841196477501157	CTGTTTCAATTACATT
chr13	85675696	85675697	chr13:85675697:T:G	rs80145710	T	G	T	Hoxd3_MA0912.1	1	1	+	9.14350665940472	7.05944617186859	TTGTGATCATTAAACT
chr13	86408230	86408231	chr13:86408231:C:A	rs7328224	C	A	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr13	87128598	87128599	chr13:87128599:A:G	rs73561091	A	G	G	Hoxd3_MA0912.1	13	1	+	10.087519126381032	9.113677944180324	TTGTCGTAATTAAAGT
chr13	87953602	87953603	chr13:87953603:T:A	rs1348292	T	A	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr13	89066883	89066884	chr13:89066884:T:C	rs9515519	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr13	89991894	89991895	chr13:89991895:G:T	rs9555963	G	T	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	90779726	90779727	chr13:90779727:A:C	rs272080	A	C	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr13	90834116	90834117	chr13:90834117:A:G	rs1335568	A	G	G	Hoxd3_MA0912.1	0	1	-	8.643605050308942	8.591099552931011	TGGAGATAATTACTGC
chr13	91051394	91051395	chr13:91051395:G:C	rs2045569	G	C	C	Hoxd3_MA0912.1	13	1	-	9.734149998458511	8.156072087745427	TTTGGTTCATTAACCT
chr13	91305275	91305276	chr13:91305276:T:C	rs913895	T	C	C	Hoxd3_MA0912.1	14	1	+	9.323204510439353	9.887540956571645	CTGTATTAATTATCTG
chr13	91347241	91347242	chr13:91347242:T:A	rs1888138	T	A	T	Hoxd3_MA0912.1	8	1	-	7.32799494854291	2.8373177617759193	CCGAGGTAATTAGGGG
chr13	92064372	92064373	chr13:92064373:G:T	rs7994471	G	T	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr13	92344304	92344305	chr13:92344305:G:A	rs9589512	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr13	92344332	92344333	chr13:92344333:A:G	rs9589513	A	G	A	Hoxd3_MA0912.1	8	1	+	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr13	92803052	92803053	chr13:92803053:C:T	rs60229870	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	93003589	93003590	chr13:93003590:C:A	rs308244	C	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr13	93058132	93058133	chr13:93058133:T:C	rs2117717	T	C	C	Hoxd3_MA0912.1	0	1	-	9.75859941977393	8.438151624451626	ATGAAATAATTATCCT
chr13	93059725	93059726	chr13:93059726:C:T	rs74543813	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr13	93059748	93059749	chr13:93059749:C:T	rs479705	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr13	93075616	93075617	chr13:93075617:T:C	rs1444231	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr13	93118079	93118080	chr13:93118080:A:G	rs1867437	A	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr13	93286126	93286127	chr13:93286127:G:T	rs9523997	G	T	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr13	93500940	93500941	chr13:93500941:C:T	rs2590509	C	T	C	Hoxd3_MA0912.1	4	1	-	8.077831070235202	7.473594341722828	CTGAGGTCATTGCCAT
chr13	94211663	94211664	chr13:94211664:G:A	rs1333247	G	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr13	94346170	94346171	chr13:94346171:C:A	rs9516399	C	A	C	Hoxd3_MA0912.1	12	1	+	9.506085433181042	9.506085433181042	CTTAACTAATTACCTC
chr13	95226167	95226168	chr13:95226168:T:C	rs61965944	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr13	95226962	95226963	chr13:95226963:G:A	rs4773853	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr13	95273059	95273060	chr13:95273060:G:T	rs17268282	G	T	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr13	95376722	95376723	chr13:95376723:A:G	rs9524953	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr13	95833374	95833375	chr13:95833375:T:C	rs184599902	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr13	95948887	95948888	chr13:95948888:G:A	rs1486203894	G	A	G	Hoxd3_MA0912.1	13	1	-	10.476668810057388	9.872432081545014	ATGATTTAATTACCTC
chr13	96111285	96111286	chr13:96111286:T:C	rs490753	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	96460667	96460668	chr13:96460668:C:T	rs1887602	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr13	97110902	97110903	chr13:97110903:C:T	rs7317639	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr13	97165478	97165479	chr13:97165479:C:G	rs9556686	C	G	C	Hoxd3_MA0912.1	0	1	+	9.28330422805927	7.298927798176161	CTGAATTAATTATTTG
chr13	97333311	97333312	chr13:97333312:G:T	rs7358848	G	T	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr13	97653762	97653763	chr13:97653763:A:G	rs7332072	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr13	97853375	97853376	chr13:97853376:G:A	rs9584701	G	A	G	Hoxd3_MA0912.1	4	1	+	8.799986613061881	8.195749884549507	CTTGGCTCATTAACTT
chr13	97856772	97856773	chr13:97856773:G:T	rs9582183	G	T	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr13	97856808	97856809	chr13:97856809:A:G	rs9513317	A	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr13	97856816	97856817	chr13:97856817:T:C	rs9513318	T	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr13	97890764	97890765	chr13:97890765:C:G	rs9556840	C	G	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr13	98399163	98399164	chr13:98399164:C:T	rs4771302	C	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	98420676	98420677	chr13:98420677:G:T	rs7981982	G	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr13	98574996	98574997	chr13:98574997:T:G	rs7989979	T	G	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr13	98755946	98755947	chr13:98755947:C:T	rs115983120	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr13	98893535	98893536	chr13:98893536:C:T	rs4772154	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr13	98893556	98893557	chr13:98893557:A:G	rs941690957	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr13	99101896	99101897	chr13:99101897:T:C	rs9517609	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr13	99199758	99199759	chr13:99199759:A:C	rs114270874	A	C	A	Hoxd3_MA0912.1	9	1	-	11.541288665271363	7.05061147850437	ATGTGCTAATTACCCT
chr13	99218210	99218211	chr13:99218211:T:C	rs9517652	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr13	99254963	99254964	chr13:99254964:G:A	rs59722139	G	A	G	Hoxd3_MA0912.1	14	1	+	7.669691271954596	6.725725942190461	CGAAGGTAATTACGGT
chr13	99309458	99309459	chr13:99309459:G:T	rs12583270	G	T	G	Hoxd3_MA0912.1	5	1	+	8.999359407860085	9.128154516065656	ATGGGGTCATTATCCT
chr13	99411910	99411911	chr13:99411911:G:A	rs4319612	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr13	99467621	99467622	chr13:99467622:T:G	rs7317330	T	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr13	99469357	99469358	chr13:99469358:T:A	rs73556170	T	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr13	99585861	99585862	chr13:99585862:C:G	rs73562221	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr13	99694634	99694635	chr13:99694635:C:T	rs9557282	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr13	99847433	99847434	chr13:99847434:G:C	rs1886034	G	C	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr13	99859749	99859750	chr13:99859750:T:C	rs17658053	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr13	100502842	100502843	chr13:100502843:T:A	rs3783181	T	A	A	Hoxd3_MA0912.1	12	1	-	9.558590930558973	8.351839010554109	TTTTTCTAATTAACCC
chr13	100695646	100695647	chr13:100695647:T:C	rs74643761	T	C	T	Hoxd3_MA0912.1	15	1	+	7.959498121808355	7.181793553220348	CTGGGCTCATTAGGGT
chr13	101018487	101018488	chr13:101018488:T:A	rs80205525	T	A	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	101049394	101049395	chr13:101049395:C:T	rs3751403	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr13	101049411	101049412	chr13:101049412:G:C	rs628949	G	C	C	Hoxd3_MA0912.1	2	1	+	10.39150203766748	8.608027619973535	CTGAGGCAATTACAGT
chr13	101101748	101101749	chr13:101101749:C:T	rs185875099	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr13	102226068	102226069	chr13:102226069:C:T	rs1336695	C	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr13	102708391	102708392	chr13:102708392:G:A	rs116738262	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr13	102774319	102774320	chr13:102774320:G:T	rs945062296	G	T	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr13	102914885	102914886	chr13:102914886:C:T	rs2146993	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr13	103034411	103034412	chr13:103034412:C:G	rs9514085	C	G	c	Hoxd3_MA0912.1	0	1	+	9.03418247157275	7.04980604168964	CTGAAATAATTATCTG
chr13	103071371	103071372	chr13:103071372:G:A	rs7319981	G	A	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr13	103349937	103349938	chr13:103349938:A:G	rs8002886	A	G	A	Hoxd3_MA0912.1	10	1	-	8.203487048815406	1.4238038061849798	CTTGGGTAATTAGGCC
chr13	103539617	103539618	chr13:103539618:T:C	rs7328846	T	C	T	Hoxd3_MA0912.1	8	1	-	7.49909780553965	0.6105253459742871	CTGGTCTCATGACTCT
chr13	103717097	103717098	chr13:103717098:C:T	rs7328544	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr13	104002042	104002043	chr13:104002043:A:G	rs9586343	A	G	A	Hoxd3_MA0912.1	3	1	+	8.191081021693087	8.076983270654063	CTTATTTCATTACCGG
chr13	104007139	104007140	chr13:104007140:C:T	rs1849445	C	T	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr13	104067472	104067473	chr13:104067473:G:T	rs2806764	G	T	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr13	104067475	104067476	chr13:104067476:T:C	rs80295554	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr13	104834136	104834137	chr13:104834137:G:C	rs7987012	G	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr13	104834158	104834159	chr13:104834159:A:T	rs9558406	A	T	A	Hoxd3_MA0912.1	11	1	+	7.922834751620572	3.5851436905265306	CTGCACTCATTAGCCT
chr13	104834170	104834171	chr13:104834171:T:A	rs9519488	T	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr13	104955255	104955256	chr13:104955256:A:C	rs11841101	A	C	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr13	105035199	105035200	chr13:105035200:A:T	rs117085051	A	T	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr13	105139644	105139645	chr13:105139645:T:C	rs16965861	T	C	T	Hoxd3_MA0912.1	1	1	+	9.024523013646785	6.940462526110656	CTGTGCTCATTATCCT
chr13	105160115	105160116	chr13:105160116:A:G	rs146329109	A	G	A	Hoxd3_MA0912.1	7	1	+	12.105625111403654	5.325941868773226	ATGAGCTAATTACCCT
chr13	105170660	105170661	chr13:105170661:G:C	rs16966027	G	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr13	105308042	105308043	chr13:105308043:T:C	rs12430691	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr13	105830644	105830645	chr13:105830645:T:C	rs7322890	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr13	105919767	105919768	chr13:105919768:T:C	rs58935130	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr13	105967449	105967450	chr13:105967450:T:C	rs79832300	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr13	105996509	105996510	chr13:105996510:C:T	rs2247677	C	T	c	Hoxd3_MA0912.1	23	0	+	0	0	.
chr13	106043374	106043375	chr13:106043375:G:A	rs35842306	G	A	G	Hoxd3_MA0912.1	14	1	+	7.322682440255203	6.378717110491069	CTGGACTCATGACTGT
chr13	106186043	106186044	chr13:106186044:A:G	rs111556033	A	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	106508559	106508560	chr13:106508560:T:C	rs8002701	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr13	106611072	106611073	chr13:106611073:A:G	rs12868551	A	G	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	106656373	106656374	chr13:106656374:A:G	chr13:106656374:A:G	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr13	106691863	106691864	chr13:106691864:A:T	rs6492029	A	T	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr13	106709859	106709860	chr13:106709860:G:A	rs1411736	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr13	107006752	107006753	chr13:107006753:T:C	rs4509877	T	C	C	Hoxd3_MA0912.1	0	1	+	9.14350665940472	9.091001162026789	TTGAGATCATTACTTT
chr13	107067680	107067681	chr13:107067681:A:T	rs9514614	A	T	A	Hoxd3_MA0912.1	13	1	+	7.954560036377789	7.954560036377789	TTGGGGAAATTACACT
chr13	107130366	107130367	chr13:107130367:G:A	rs2769877	G	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr13	107247700	107247701	chr13:107247701:G:A	rs11616947	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr13	107993829	107993830	chr13:107993830:G:A	rs9520682	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr13	108773643	108773644	chr13:108773644:A:G	rs9521030	A	G	A	Hoxd3_MA0912.1	11	1	+	8.901848704668668	7.1159227564876755	CTTAACTAATTACATC
chr13	108773656	108773657	chr13:108773657:T:C	rs9521031	T	C	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr13	108956663	108956664	chr13:108956664:A:C	rs1556809	A	C	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr13	108956683	108956684	chr13:108956684:G:C	rs75137190	G	C	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr13	108964922	108964923	chr13:108964923:G:A	rs11843242	G	A	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr13	109235614	109235615	chr13:109235615:A:G	rs11842325	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr13	109412397	109412398	chr13:109412398:G:A	rs72662025	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	109427925	109427926	chr13:109427926:C:A	rs1410418	C	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr13	109459698	109459699	chr13:109459699:T:C	rs72662063	T	C	T	Hoxd3_MA0912.1	8	1	-	8.054385688757412	1.1658132291920495	CCTGGGTAATTACCTG
chr13	109624494	109624495	chr13:109624495:T:A	rs887937491	T	A	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	109848272	109848273	chr13:109848273:A:G	rs11069811	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr13	110024646	110024647	chr13:110024647:A:G	rs4773111	A	G	A	Hoxd3_MA0912.1	8	1	+	8.17089961273475	1.2823271531693898	CTGGAACAATTACAGC
chr13	110132346	110132347	chr13:110132347:G:C	rs9521615	G	C	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr13	110264205	110264206	chr13:110264206:C:T	rs497888	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr13	110264206	110264207	chr13:110264207:G:A	rs74126133	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr13	110305159	110305160	chr13:110305160:T:C	rs2220833	T	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr13	110499986	110499987	chr13:110499987:G:A	rs138815283	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr13	110819894	110819895	chr13:110819895:C:A	rs2182572	C	A	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr13	111176029	111176030	chr13:111176030:A:G	rs56366615	A	G	A	Hoxd3_MA0912.1	8	1	+	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr13	111238951	111238952	chr13:111238952:G:A	rs7990746	G	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr13	111304666	111304667	chr13:111304667:T:C	rs79738038	T	C	T	Hoxd3_MA0912.1	10	1	+	8.023314148948472	1.2436309063180444	CCTTGCTAATTACAGT
chr13	111311886	111311887	chr13:111311887:G:A	rs9555787	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr13	111439313	111439314	chr13:111439314:G:A	rs9522234	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr13	111475647	111475648	chr13:111475648:G:A	rs139027580	G	A	G	Hoxd3_MA0912.1	14	1	+	8.546354779692535	7.602389449928401	CTGATTCCATTAACGT
chr13	111588773	111588774	chr13:111588774:G:A	rs914033	G	A	G	Hoxd3_MA0912.1	14	1	+	7.40502420117643	6.4610588714122965	CTGATCTCATTGCCGG
chr13	111588780	111588781	chr13:111588781:C:G	rs914034	C	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr13	111952595	111952596	chr13:111952596:A:G	rs735223	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr13	111976973	111976974	chr13:111976974:T:C	rs76543731	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr13	112104817	112104818	chr13:112104818:A:G	rs7996044	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	112238171	112238172	chr13:112238172:C:T	rs35591577	C	T	c	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr13	112349110	112349111	chr13:112349111:G:A	rs17120975	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr13	112668952	112668953	chr13:112668953:A:G	rs79291001	A	G	A	Hoxd3_MA0912.1	0	1	-	11.420621703763258	11.368116206385327	TTGGGTTAATTACAGG
chr13	112711919	112711920	chr13:112711920:C:G	rs282571	C	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr13	112732907	112732908	chr13:112732908:T:C	rs428853	T	C	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr13	113380125	113380126	chr13:113380126:T:G	rs4243795	T	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr13	113416547	113416548	chr13:113416548:C:G	rs9549778	C	G	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr13	113432116	113432117	chr13:113432117:A:G	rs12855974	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr13	113548068	113548069	chr13:113548069:T:C	rs144425243	T	C	.	Hoxd3_MA0912.1	6	1	+	7.676296876705938	5.890370928524944	TTCTGCTAATGAACCG
chr13	113739522	113739523	chr13:113739523:T:C	rs146554879	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr13	113739533	113739534	chr13:113739534:G:A	rs149131071	G	A	G	Hoxd3_MA0912.1	2	1	+	8.12025495348449	6.670419909327451	CTGAGTCAATGATCCT
chr13	113739559	113739560	chr13:113739560:C:T	rs143401973	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr13	114004825	114004826	chr13:114004826:C:T	rs7986599	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr13	114035508	114035509	chr13:114035509:A:G	rs117811840	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr13	114038408	114038409	chr13:114038409:G:A	rs7995126	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr13	114038411	114038412	chr13:114038412:C:T	rs61973885	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr13	114090197	114090198	chr13:114090198:C:T	rs7335140	C	T	c	Hoxd3_MA0912.1	12	1	+	11.14230449413753	9.935552574132666	CAGGTTTAATTACCCT
chr13	114294894	114294895	chr13:114294895:T:G	rs187147632	T	G	-	Hoxd3_MA0912.1	7	1	-	7.186772412436299	5.212830046255781	CTGACCTAATGATCCG
chr14	18302585	18302586	chr14:18302586:G:T	rs28579755	G	T	.	Hoxd3_MA0912.1	16	0	+	0	0	.
chr14	20295286	20295287	chr14:20295287:T:C	rs1953551	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	20436211	20436212	chr14:20436212:T:C	rs45609435	T	C	T	Hoxd3_MA0912.1	0	1	+	7.858792422377542	7.806286924999611	TGGGGCTAATTATAGC
chr14	20683188	20683189	chr14:20683189:C:T	rs17114633	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr14	20727617	20727618	chr14:20727618:A:G	rs73574051	A	G	A	Hoxd3_MA0912.1	6	1	-	9.58309636437781	7.797170416196817	TTCTTTTAATTACTCT
chr14	21107332	21107333	chr14:21107333:C:T	rs74037706	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr14	21107363	21107364	chr14:21107364:C:T	rs28407152	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr14	21164035	21164036	chr14:21164036:A:G	rs74037727	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr14	21518977	21518978	chr14:21518978:G:A	rs7148594	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr14	21570318	21570319	chr14:21570319:G:A	rs11626669	G	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr14	21736134	21736135	chr14:21736135:G:C	rs113037741	G	C	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr14	21929166	21929167	chr14:21929167:T:G	rs10144270	T	G	T	Hoxd3_MA0912.1	7	1	-	9.38424157659644	7.410299210415921	TTGAACTAATTACTTA
chr14	21960401	21960402	chr14:21960402:C:T	rs2331474	C	T	T	Hoxd3_MA0912.1	2	1	-	10.06480723536329	8.61497219120625	ATGTGGTAATTAACCA
chr14	22381018	22381019	chr14:22381019:G:C	rs560487058	G	C	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr14	22483098	22483099	chr14:22483099:A:G	rs227861	A	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	22644174	22644175	chr14:22644175:C:T	rs3102229	C	T	C	Hoxd3_MA0912.1	14	1	-	8.575711303252287	7.631745973488153	TCAAGATAATTACCGT
chr14	22791482	22791483	chr14:22791483:T:C	rs4605074	T	C	C	Hoxd3_MA0912.1	7	1	-	7.907670337538336	1.1279870949079087	TTCTGCTAATTGCTGT
chr14	22837693	22837694	chr14:22837694:C:G	rs17886414	C	G	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr14	22890596	22890597	chr14:22890597:A:G	rs111315770	A	G	A	Hoxd3_MA0912.1	13	1	-	9.18542543821666	9.789662166729034	TTATGGTAATTATTCT
chr14	22929992	22929993	chr14:22929993:G:C	rs571205664	G	C	G	Hoxd3_MA0912.1	11	1	+	7.608247892023815	2.649537670792479	CTGGGTTAATGGCTGG
chr14	22929997	22929998	chr14:22929998:T:G	rs372336179	T	G	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr14	23025777	23025778	chr14:23025778:T:C	rs941717	T	C	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr14	23544646	23544647	chr14:23544647:C:T	rs114261046	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr14	24007516	24007517	chr14:24007517:G:A	rs1464339095	G	A	-	Hoxd3_MA0912.1	20	0	+	0	0	.
chr14	24007531	24007532	chr14:24007532:C:T	rs528605778	C	T	-	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	24913088	24913089	chr14:24913089:C:T	rs117948473	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr14	25161563	25161564	chr14:25161564:C:G	rs12891276	C	G	C	Hoxd3_MA0912.1	11	1	-	6.916347952943195	1.9576377317118592	CTGGGGCAATTGAGCC
chr14	25756398	25756399	chr14:25756399:C:T	rs1951049	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr14	25803661	25803662	chr14:25803662:T:A	rs17278139	T	A	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	25844110	25844111	chr14:25844111:C:T	chr14:25844111:C:T	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr14	25993981	25993982	chr14:25993982:A:G	rs1950951	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr14	26394671	26394672	chr14:26394672:A:T	rs17495733	A	T	A	Hoxd3_MA0912.1	6	1	-	8.619436865294102	4.281745804200062	ATTTGCTAATTACAGG
chr14	26733474	26733475	chr14:26733475:A:T	rs10083516	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr14	27257433	27257434	chr14:27257434:T:C	rs12435139	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr14	27531043	27531044	chr14:27531044:G:A	rs2022898	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr14	27673018	27673019	chr14:27673019:C:T	rs532338229	C	T	c	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	28417633	28417634	chr14:28417634:T:C	rs12147366	T	C	C	Hoxd3_MA0912.1	1	1	+	8.37847347561081	6.294412988074681	CTGTGGCAATTAACTA
chr14	28583199	28583200	chr14:28583200:T:C	rs2333419	T	C	C	Hoxd3_MA0912.1	12	1	+	8.553435594656746	9.76018751466161	CTTGCCTAATTATCCT
chr14	28902675	28902676	chr14:28902676:T:C	rs2145453	T	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr14	28953600	28953601	chr14:28953601:A:G	rs1570130	A	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr14	29009254	29009255	chr14:29009255:A:G	rs78565318	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr14	29585300	29585301	chr14:29585301:A:G	rs45627141	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr14	30181285	30181286	chr14:30181286:C:T	rs10483383	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr14	30849458	30849459	chr14:30849459:T:G	rs561162471	T	G	T	Hoxd3_MA0912.1	12	1	-	7.196556997892606	7.196556997892606	CTTGGCCAATTAAGCC
chr14	31062648	31062649	chr14:31062649:T:C	rs4981820	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr14	31475973	31475974	chr14:31475974:G:A	rs76338658	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr14	31885253	31885254	chr14:31885254:T:C	rs8008192	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr14	31927092	31927093	chr14:31927093:C:T	rs1278893	C	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr14	31945058	31945059	chr14:31945059:A:G	rs2236531	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	32333087	32333088	chr14:32333088:A:G	rs7151016	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr14	32426158	32426159	chr14:32426159:G:A	rs17099056	G	A	g	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr14	32493959	32493960	chr14:32493960:C:T	rs6571529	C	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr14	32507175	32507176	chr14:32507176:G:A	rs75705832	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr14	32676023	32676024	chr14:32676024:A:G	rs1956206	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr14	32707359	32707360	chr14:32707360:C:T	rs1295912	C	T	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr14	33762378	33762379	chr14:33762379:A:G	chr14:33762379:A:G	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr14	33838160	33838161	chr14:33838161:G:A	rs183669353	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	33849069	33849070	chr14:33849070:G:A	rs60162554	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	33849496	33849497	chr14:33849497:C:T	rs28401640	C	T	T	Hoxd3_MA0912.1	0	1	+	7.875640557220013	7.928146054597942	CTGGAGTCATTGCTCT
chr14	33849504	33849505	chr14:33849505:A:G	rs28507410	A	G	A	Hoxd3_MA0912.1	8	1	+	7.875640557220013	0.9870680976546506	CTGGAGTCATTGCTCT
chr14	33938876	33938877	chr14:33938877:T:G	rs1680695	T	G	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr14	34137429	34137430	chr14:34137430:A:G	rs797326	A	G	A	Hoxd3_MA0912.1	8	1	+	7.480278285018672	0.5917058254533092	CTCAGCTCATTAGCTT
chr14	34516299	34516300	chr14:34516300:G:C	rs7766	G	C	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr14	35331907	35331908	chr14:35331908:A:C	rs78764488	A	C	A	Hoxd3_MA0912.1	9	1	-	10.4160582453313	5.925381058564309	AAGAGTTAATTACTGT
chr14	35420559	35420560	chr14:35420560:A:G	rs56213784	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr14	35632567	35632568	chr14:35632568:T:C	rs142125541	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr14	36091287	36091288	chr14:36091288:T:G	rs80243333	T	G	T	Hoxd3_MA0912.1	10	1	+	8.87012696432798	6.896184598147461	CTGTGTTAATTATTGA
chr14	36446729	36446730	chr14:36446730:C:A	chr14:36446730:C:A	C	A	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr14	36455208	36455209	chr14:36455209:C:G	rs17104536	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	36818398	36818399	chr14:36818399:C:T	rs1652256	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	37123304	37123305	chr14:37123305:T:G	rs12889779	T	G	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr14	37246351	37246352	chr14:37246352:G:C	rs78790640	G	C	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr14	38548283	38548284	chr14:38548284:T:C	rs7147094	T	C	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr14	39217445	39217446	chr14:39217446:C:A	rs2117337	C	A	a	Hoxd3_MA0912.1	5	1	-	9.591762352661805	9.720557460867376	GTGAGGTAATTAAACC
chr14	39592811	39592812	chr14:39592812:C:A	rs2180390	C	A	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	39845289	39845290	chr14:39845290:G:A	rs10138066	G	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr14	40888630	40888631	chr14:40888631:T:C	rs7141181	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr14	41227492	41227493	chr14:41227493:G:A	rs1782181	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	43329256	43329257	chr14:43329257:T:A	rs10498383	T	A	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr14	44490826	44490827	chr14:44490827:G:A	rs438278	G	A	G	Hoxd3_MA0912.1	4	1	+	10.66958390765591	10.065347179143536	CTAGGATAATTACCCT
chr14	44613216	44613217	chr14:44613217:G:T	rs1959503	G	T	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr14	44847904	44847905	chr14:44847905:T:C	rs11851357	T	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr14	44964650	44964651	chr14:44964651:G:A	rs73346351	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	45717139	45717140	chr14:45717140:G:A	rs1266262	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr14	46010437	46010438	chr14:46010438:G:A	rs12883292	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	46063821	46063822	chr14:46063822:G:A	rs73233936	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	46195645	46195646	chr14:46195646:A:G	rs858868	A	G	G	Hoxd3_MA0912.1	12	1	+	10.056677990508701	9.089155759569671	TTGAGATAATTAACTA
chr14	46465323	46465324	chr14:46465324:T:C	rs17672908	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr14	47543584	47543585	chr14:47543585:A:C	rs1955809	A	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	47676400	47676401	chr14:47676401:A:G	rs7149713	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	47966859	47966860	chr14:47966860:G:A	rs12880135	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr14	47976480	47976481	chr14:47976481:C:G	rs79945386	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr14	48300015	48300016	chr14:48300016:C:T	rs1769535	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr14	49191527	49191528	chr14:49191528:T:C	rs145059219	T	C	T	Hoxd3_MA0912.1	1	1	-	9.697723765779903	8.839899492405712	AAGGTTTAATTAATGT
chr14	49371662	49371663	chr14:49371663:A:G	rs2183616	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr14	50006379	50006380	chr14:50006380:T:C	rs11626611	T	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	50043834	50043835	chr14:50043835:G:A	rs2355661	G	A	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	50530012	50530013	chr14:50530013:G:C	rs2883948	G	C	G	Hoxd3_MA0912.1	5	1	-	9.660903757423366	9.849430091104203	TTGTTCTAATTACTTG
chr14	51094485	51094486	chr14:51094486:C:T	chr14:51094486:C:T	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr14	51442460	51442461	chr14:51442461:C:T	rs61029578	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr14	51608006	51608007	chr14:51608007:T:G	rs541951054	T	G	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr14	52063563	52063564	chr14:52063564:A:C	rs1390966	A	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr14	52077896	52077897	chr14:52077897:G:A	rs12433236	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr14	52130231	52130232	chr14:52130232:C:G	rs7149418	C	G	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr14	52355738	52355739	chr14:52355739:A:T	rs79971343	A	T	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr14	52355746	52355747	chr14:52355747:G:A	rs1254564	G	A	A	Hoxd3_MA0912.1	3	1	+	7.798656490288867	7.912754241327891	CAGGGTTCATGACCCT
chr14	52355776	52355777	chr14:52355777:A:G	rs77761540	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr14	52628103	52628104	chr14:52628104:T:C	rs1007895	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr14	52734788	52734789	chr14:52734789:T:C	rs2065052	T	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr14	52856875	52856876	chr14:52856876:G:T	rs73300769	G	T	G	Hoxd3_MA0912.1	3	1	+	10.111142452516633	9.660903757423366	TTGGTCTAATTACATG
chr14	53277698	53277699	chr14:53277699:T:A	rs10134633	T	A	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr14	53286115	53286116	chr14:53286116:A:G	rs1424827	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr14	53927247	53927248	chr14:53927248:G:A	rs58757077	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr14	54049125	54049126	chr14:54049126:G:A	rs11158000	G	A	G	Hoxd3_MA0912.1	2	1	-	7.867577965294705	8.333861813437908	CTCGTGTAATTATTCC
chr14	54132246	54132247	chr14:54132247:T:G	rs11622022	T	G	T	Hoxd3_MA0912.1	15	1	+	11.064943528207309	10.240934391577614	CTGAGATAATTACATT
chr14	54175567	54175568	chr14:54175568:G:T	chr14:54175568:G:T	G	T	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr14	54177921	54177922	chr14:54177922:A:C	rs811134	A	C	C	Hoxd3_MA0912.1	4	1	-	8.908591381350316	9.512828109862689	CACTTTTAATTAACCT
chr14	54188411	54188412	chr14:54188412:T:A	rs10142814	T	A	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr14	54337444	54337445	chr14:54337445:C:T	rs11625167	C	T	C	Hoxd3_MA0912.1	4	1	-	9.390296332341963	8.786059603829589	ATCAGGTAATTAACAT
chr14	54774330	54774331	chr14:54774331:C:A	rs9323270	C	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr14	54882118	54882119	chr14:54882119:C:G	rs3825611	C	G	C	Hoxd3_MA0912.1	6	1	+	9.399344228307264	4.4406340070759285	CTGATGCAATTACTTT
chr14	55449506	55449507	chr14:55449507:G:T	rs10150617	G	T	G	Hoxd3_MA0912.1	5	1	+	8.647914789763375	8.776709897968946	TAGATGTAATTAAGGC
chr14	55450818	55450819	chr14:55450819:G:C	rs17128488	G	C	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr14	55547651	55547652	chr14:55547652:C:T	rs74053617	C	T	C	Hoxd3_MA0912.1	10	1	-	8.93061818244489	4.124877305994983	CTGATTTAATGAAGCT
chr14	56196426	56196427	chr14:56196427:A:C	rs17091112	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr14	56647075	56647076	chr14:56647076:G:A	rs67589145	G	A	A	Hoxd3_MA0912.1	11	1	+	8.498365486229494	10.284291434410486	CTGTAATAATTGCAGT
chr14	56770342	56770343	chr14:56770343:A:G	rs198222	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr14	57067426	57067427	chr14:57067427:C:A	rs2146858	C	A	A	Hoxd3_MA0912.1	2	1	-	9.696016716260566	8.378826146709821	ATGTTTTAATTAAAGC
chr14	57090103	57090104	chr14:57090104:C:T	rs11850777	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr14	57090117	57090118	chr14:57090118:C:T	rs12890995	C	T	C	Hoxd3_MA0912.1	4	1	-	8.852717590764403	8.24848086225203	GAGGGGTAATTACTGT
chr14	57493325	57493326	chr14:57493326:C:T	rs268814	C	T	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr14	57684941	57684942	chr14:57684942:A:G	rs17093548	A	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	58201063	58201064	chr14:58201064:G:A	rs556338462	G	A	G	Hoxd3_MA0912.1	12	1	-	8.51564318562914	7.308891265624274	ATGATGTAATTGCCTG
chr14	58663934	58663935	chr14:58663935:A:G	rs139732185	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr14	58883225	58883226	chr14:58883226:C:T	rs12589573	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	58883250	58883251	chr14:58883251:C:T	rs12586398	C	T	C	Hoxd3_MA0912.1	12	1	+	8.632928228190389	7.426176308185525	ATTGTTTAATTACGGT
chr14	58897421	58897422	chr14:58897422:G:C	rs413692	G	C	G	Hoxd3_MA0912.1	13	1	+	7.598193571967414	9.176271482680495	ATGAGGTCATTAGGGT
chr14	58926524	58926525	chr14:58926525:T:G	rs6573228	T	G	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr14	58988056	58988057	chr14:58988057:G:A	rs11158240	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr14	59087878	59087879	chr14:59087879:T:C	rs11621396	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr14	59094836	59094837	chr14:59094837:G:A	rs3759703	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	59254153	59254154	chr14:59254154:T:G	rs17833834	T	G	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr14	60514961	60514962	chr14:60514962:G:C	rs113669657	G	C	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr14	61104603	61104604	chr14:61104604:C:T	rs571746660	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	61104643	61104644	chr14:61104644:A:G	rs896354304	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	61126391	61126392	chr14:61126392:A:G	rs10134030	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr14	61127969	61127970	chr14:61127970:C:T	rs11624065	C	T	c	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr14	61145892	61145893	chr14:61145893:A:G	rs2182982	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr14	61187403	61187404	chr14:61187404:G:A	rs117345793	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr14	61196382	61196383	chr14:61196383:C:G	rs58960187	C	G	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr14	61239368	61239369	chr14:61239369:G:A	rs4902039	G	A	g	Hoxd3_MA0912.1	14	1	+	8.587053928346487	7.643088598582355	CTGATTTAATGAGCGC
chr14	61426048	61426049	chr14:61426049:A:G	rs13379462	A	G	A	Hoxd3_MA0912.1	8	1	+	8.71233608127439	1.823763621709028	GTGAGTCAATTAAACT
chr14	61461941	61461942	chr14:61461942:G:A	rs80003293	G	A	G	Hoxd3_MA0912.1	15	1	-	8.177268879745913	8.954973448333922	TTGCGGTAATGACTGC
chr14	61485478	61485479	chr14:61485479:C:T	rs115387259	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr14	61523398	61523399	chr14:61523399:A:T	rs12589100	A	T	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr14	61524403	61524404	chr14:61524404:C:T	rs558792431	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	61611738	61611739	chr14:61611739:T:C	rs10143178	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr14	61907373	61907374	chr14:61907374:T:C	rs2023211	T	C	T	Hoxd3_MA0912.1	15	1	+	9.410532424489375	8.632827855901366	CTGCATTAATTATCTT
chr14	62182091	62182092	chr14:62182092:A:G	rs1514930	A	G	A	Hoxd3_MA0912.1	9	1	-	9.669399270908873	2.780826811343511	TTGGGTTCATTAATCC
chr14	62182106	62182107	chr14:62182107:G:T	rs2203434	G	T	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr14	62247939	62247940	chr14:62247940:A:T	rs1399524	A	T	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	62663244	62663245	chr14:62663245:C:T	rs10145314	C	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr14	63175020	63175021	chr14:63175021:C:G	rs373984678	C	G	C	Hoxd3_MA0912.1	14	1	+	9.092072517129372	8.915657151844924	TAGGGGTCATTACTCT
chr14	63285158	63285159	chr14:63285159:G:A	rs1357335235	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr14	63544064	63544065	chr14:63544065:A:C	rs74056144	A	C	A	Hoxd3_MA0912.1	1	1	-	9.753374925484461	7.669314437948329	CTGCATTAATTAAACG
chr14	63642101	63642102	chr14:63642102:C:T	rs531355613	C	T	C	Hoxd3_MA0912.1	5	1	-	7.815948651171581	7.091385274378258	ATGGGGCCATTAAACT
chr14	63789084	63789085	chr14:63789085:A:G	rs73267664	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr14	63933401	63933402	chr14:63933402:C:A	rs12881652	C	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr14	64233573	64233574	chr14:64233574:C:T	rs944047	C	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	64233580	64233581	chr14:64233581:G:A	rs944046	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr14	64245636	64245637	chr14:64245637:A:G	rs1952585	A	G	A	Hoxd3_MA0912.1	0	1	-	9.84036234284417	9.78785684546624	TTGAGATAATTACAGA
chr14	64715597	64715598	chr14:64715598:C:T	rs74056393	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr14	64730696	64730697	chr14:64730697:T:C	rs73273530	T	C	t	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr14	65134970	65134971	chr14:65134971:T:G	rs4902363	T	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	65135003	65135004	chr14:65135004:A:T	rs74056672	A	T	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr14	65186506	65186507	chr14:65186507:A:G	rs1395987950	A	G	A	Hoxd3_MA0912.1	10	1	-	10.089553273501663	3.3098700308712345	TTAGGCTAATTAAATT
chr14	65403474	65403475	chr14:65403475:T:C	rs913880743	T	C	T	Hoxd3_MA0912.1	11	1	-	11.254373378645397	9.468447430464403	ATGAGTTAATTAATTT
chr14	65581117	65581118	chr14:65581118:T:C	rs58087042	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr14	65773288	65773289	chr14:65773289:T:C	rs559759693	T	C	T	Hoxd3_MA0912.1	8	1	-	7.076715790604688	0.18814333103932557	CAGGGCCAATTGATGT
chr14	65828495	65828496	chr14:65828496:C:T	rs137885580	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr14	65835673	65835674	chr14:65835674:G:C	rs76315879	G	C	G	Hoxd3_MA0912.1	12	1	-	7.941954821379943	6.974432590440912	CTGGGGTAATTTCCTT
chr14	66045536	66045537	chr14:66045537:T:A	rs114032947	T	A	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr14	66045544	66045545	chr14:66045545:T:C	rs17103234	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr14	66316577	66316578	chr14:66316578:T:C	rs892699	T	C	t	Hoxd3_MA0912.1	15	1	+	8.593691307730355	7.815986739142347	TTGGAGTCATTACTAT
chr14	66316592	66316593	chr14:66316593:G:C	rs892700	G	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr14	67557151	67557152	chr14:67557152:G:A	rs10873206	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	67940667	67940668	chr14:67940668:G:A	rs34717397	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr14	67940682	67940683	chr14:67940683:T:C	rs146082070	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr14	67958091	67958092	chr14:67958092:C:T	rs4902538	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr14	67977744	67977745	chr14:67977745:A:G	rs12433779	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	67986336	67986337	chr14:67986337:C:T	rs7157185	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr14	67987695	67987696	chr14:67987696:A:G	rs1357241093	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	68011421	68011422	chr14:68011422:A:G	rs6573805	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr14	68088754	68088755	chr14:68088755:A:G	rs76021770	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr14	68332384	68332385	chr14:68332385:A:T	rs2180769	A	T	A	Hoxd3_MA0912.1	6	1	-	10.539519189994365	6.201828128900324	TTTGATTAATTACCTT
chr14	68452298	68452299	chr14:68452299:A:T	rs10467820	A	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr14	68504042	68504043	chr14:68504043:C:T	rs904681260	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr14	68621852	68621853	chr14:68621853:C:T	rs144467869	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr14	68621861	68621862	chr14:68621862:T:G	rs8009151	T	G	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr14	68736108	68736109	chr14:68736109:T:C	rs7144216	T	C	T	Hoxd3_MA0912.1	5	1	-	9.081693880075333	9.806257256868658	TTAACATAATTACCGT
chr14	68757723	68757724	chr14:68757724:C:T	rs72731529	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	68833439	68833440	chr14:68833440:C:G	rs1295793	C	G	c	Hoxd3_MA0912.1	23	0	+	0	0	.
chr14	68857926	68857927	chr14:68857927:A:G	rs372177	A	G	N	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	69087517	69087518	chr14:69087518:T:C	rs116735454	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr14	69284812	69284813	chr14:69284813:T:C	rs7141942	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	69396125	69396126	chr14:69396126:T:C	chr14:69396126:T:C	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr14	69505444	69505445	chr14:69505445:G:A	rs80025495	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr14	69756615	69756616	chr14:69756616:G:A	rs1953400	G	A	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	69999363	69999364	chr14:69999364:C:T	rs17107583	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr14	70047954	70047955	chr14:70047955:A:C	rs8011824	A	C	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr14	70344852	70344853	chr14:70344853:G:C	rs12589335	G	C	G	Hoxd3_MA0912.1	0	1	-	8.265276115445523	6.280899685562414	CTGACATAATTGCTCT
chr14	70350423	70350424	chr14:70350424:T:C	rs11620731	T	C	c	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	70829397	70829398	chr14:70829398:C:T	rs7150793	C	T	c	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr14	70887094	70887095	chr14:70887095:C:T	rs73289976	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr14	71183973	71183974	chr14:71183974:G:A	rs74641260	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr14	71183988	71183989	chr14:71183989:C:T	rs74062122	C	T	C	Hoxd3_MA0912.1	15	1	-	8.051732604570127	7.210733977610911	CTGGAGCAATTAAGCG
chr14	71186815	71186816	chr14:71186816:C:T	rs10133704	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr14	72181137	72181138	chr14:72181138:C:T	rs149653	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	72254854	72254855	chr14:72254855:T:C	rs2239262	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr14	72315220	72315221	chr14:72315221:T:C	rs847354	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	72503191	72503192	chr14:72503192:G:A	rs11844952	G	A	A	Hoxd3_MA0912.1	0	1	+	7.865058390647969	9.185506185970272	GTGACCTAATTACCTC
chr14	72735665	72735666	chr14:72735666:G:A	rs11851733	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr14	73794359	73794360	chr14:73794360:G:A	rs12587563	G	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr14	73806472	73806473	chr14:73806473:C:T	rs56185533	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr14	73888501	73888502	chr14:73888502:C:T	rs75014785	C	T	C	Hoxd3_MA0912.1	2	1	-	7.444924483556515	5.995089439399476	CTGTGCCCATTAACGG
chr14	73888516	73888517	chr14:73888517:A:C	rs8008877	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	74203888	74203889	chr14:74203889:C:G	rs72728128	C	G	C	Hoxd3_MA0912.1	14	1	-	7.803340187130913	7.9797555524153605	CTCACCTAATTACAGG
chr14	74246569	74246570	chr14:74246570:T:A	rs1860716	T	A	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr14	74378311	74378312	chr14:74378312:A:C	rs62619165	A	C	a	Hoxd3_MA0912.1	21	0	-	0	0	.
chr14	74398565	74398566	chr14:74398566:C:T	rs142470249	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	74418231	74418232	chr14:74418232:G:A	rs75323194	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr14	74634603	74634604	chr14:74634604:A:G	rs2098499	A	G	G	Hoxd3_MA0912.1	9	1	-	8.6533009677024	1.7647285081370367	TTGGAGTCATTACCCA
chr14	74863993	74863994	chr14:74863994:C:T	rs929579	C	T	C	Hoxd3_MA0912.1	14	1	+	7.4813350484024586	6.9169986022701675	CAGGGCTCATGAACCT
chr14	75329071	75329072	chr14:75329072:C:A	rs11624835	C	A	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr14	75374508	75374509	chr14:75374509:C:T	rs2205187	C	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr14	75636321	75636322	chr14:75636322:G:C	rs76997170	G	C	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr14	75636327	75636328	chr14:75636328:C:G	rs117725470	C	G	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr14	75968624	75968625	chr14:75968625:C:G	rs3917185	C	G	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr14	76041115	76041116	chr14:76041116:A:G	rs17183866	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr14	76196102	76196103	chr14:76196103:C:T	rs1900127	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr14	76298371	76298372	chr14:76298372:G:A	rs71429947	G	A	G	Hoxd3_MA0912.1	0	1	-	10.08887795294762	10.14138345032555	CTGGGCCAATTACTGT
chr14	76525368	76525369	chr14:76525369:C:T	rs2076764	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr14	76537987	76537988	chr14:76537988:T:C	rs148986152	T	C	T	Hoxd3_MA0912.1	14	1	+	9.155102821376198	9.71943926750849	CATAGTTAATTAACTG
chr14	76900876	76900877	chr14:76900877:C:T	rs149702094	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	77297422	77297423	chr14:77297423:G:A	rs1861888	G	A	A	Hoxd3_MA0912.1	14	1	+	7.99304326299915	7.049077933235015	CAGCATCAATTACCGT
chr14	77548025	77548026	chr14:77548026:C:T	rs10142516	C	T	C	Hoxd3_MA0912.1	15	1	+	9.362629999321811	10.14033456790982	TAGTTTTAATTAAACC
chr14	77617204	77617205	chr14:77617205:C:T	rs12323555	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr14	77753065	77753066	chr14:77753066:T:C	rs7148286	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr14	78062168	78062169	chr14:78062169:C:T	rs78436507	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	78091067	78091068	chr14:78091068:A:G	rs73304503	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr14	78173373	78173374	chr14:78173374:C:G	rs213562	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	78245312	78245313	chr14:78245313:C:A	rs2178864	C	A	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr14	78549505	78549506	chr14:78549506:G:A	rs2193670	G	A	G	Hoxd3_MA0912.1	4	1	+	9.690924697463053	9.08668796895068	TTGAGATAATTATCTG
chr14	78598118	78598119	chr14:78598119:T:C	rs12590819	T	C	C	Hoxd3_MA0912.1	13	1	+	8.795340074303443	9.399576802815817	CATGGATAATTACTGT
chr14	78959731	78959732	chr14:78959732:G:A	rs31426	G	A	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	79358762	79358763	chr14:79358763:C:T	rs61993073	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr14	79388864	79388865	chr14:79388865:A:C	rs4903848	A	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr14	79629494	79629495	chr14:79629495:G:A	rs73327956	G	A	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr14	80136645	80136646	chr14:80136646:G:A	rs61991223	G	A	G	Hoxd3_MA0912.1	3	1	+	9.62501737457783	9.739115125616854	AAGGTATAATTACCCT
chr14	80932012	80932013	chr14:80932013:A:G	rs8021757	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr14	81703207	81703208	chr14:81703208:T:C	rs2031856	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	81831453	81831454	chr14:81831454:C:T	rs74067321	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr14	82182955	82182956	chr14:82182956:C:T	rs78663823	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr14	83210412	83210413	chr14:83210413:G:A	rs68090711	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr14	83298283	83298284	chr14:83298284:C:G	rs143748476	C	G	c	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	83298287	83298288	chr14:83298288:A:G	rs8021658	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	83719442	83719443	chr14:83719443:C:T	rs10141403	C	T	-	Hoxd3_MA0912.1	11	1	-	8.16914868413274	9.955074632313732	TTGCGGTAATTGCGGT
chr14	84743078	84743079	chr14:84743079:C:T	rs17258331	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	84963527	84963528	chr14:84963528:C:T	rs1480419	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	85276276	85276277	chr14:85276277:G:T	rs10498582	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr14	85541786	85541787	chr14:85541787:G:A	rs115321687	G	A	G	Hoxd3_MA0912.1	5	1	+	9.055661952283426	8.331098575490103	TTGTGGCAATTAATGG
chr14	85550485	85550486	chr14:85550486:G:A	rs7154381	G	A	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr14	85950325	85950326	chr14:85950326:A:C	rs61992580	A	C	A	Hoxd3_MA0912.1	10	1	-	8.942998761935028	6.96905639575451	CTGGAATAATTAGAGG
chr14	86072225	86072226	chr14:86072226:T:G	rs11849721	T	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr14	86092732	86092733	chr14:86092733:G:A	rs142912931	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr14	86382113	86382114	chr14:86382114:A:G	rs804963	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr14	86521227	86521228	chr14:86521228:G:A	rs547182808	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	86675214	86675215	chr14:86675215:G:A	rs12588769	G	A	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr14	86768273	86768274	chr14:86768274:A:G	rs12587330	A	G	A	Hoxd3_MA0912.1	1	1	-	9.21735933146411	7.13329884392798	TTGTTTCAATTAGCCT
chr14	87150197	87150198	chr14:87150198:T:G	rs12588790	T	G	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr14	88327769	88327770	chr14:88327770:G:A	rs11627878	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr14	88455371	88455372	chr14:88455372:G:A	rs845757	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr14	88502803	88502804	chr14:88502804:G:A	rs11845147	G	A	G	Hoxd3_MA0912.1	13	1	-	7.57903728997718	6.974800561464805	CCAAGTTCATTACCCT
chr14	88621456	88621457	chr14:88621457:A:G	rs941668	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	88821783	88821784	chr14:88821784:T:C	rs189539421	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr14	89199575	89199576	chr14:89199576:A:G	rs60137734	A	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr14	89234485	89234486	chr14:89234486:T:C	rs12431575	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	89450089	89450090	chr14:89450090:G:A	rs7158072	G	A	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr14	89455046	89455047	chr14:89455047:C:T	rs17798879	C	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr14	89805607	89805608	chr14:89805608:C:G	rs12893102	C	G	C	Hoxd3_MA0912.1	13	1	+	8.687984061317556	7.109906150604473	AAGTGTTAATTACCAG
chr14	90356136	90356137	chr14:90356137:T:C	rs12590712	T	C	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr14	90452090	90452091	chr14:90452091:C:T	rs3742665	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr14	90778854	90778855	chr14:90778855:C:T	rs116090382	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	90869407	90869408	chr14:90869408:T:A	rs8014028	T	A	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr14	91253332	91253333	chr14:91253333:G:T	rs190731577	G	T	g	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr14	91323411	91323412	chr14:91323412:A:G	rs1031610165	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr14	91397544	91397545	chr14:91397545:T:A	rs960476150	T	A	T	Hoxd3_MA0912.1	11	1	-	9.494436785893548	5.1567457247995065	TTGATGTAATTAGCAG
chr14	91397579	91397580	chr14:91397580:A:C	rs77450079	A	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr14	91397606	91397607	chr14:91397607:T:C	chr14:91397607:T:C	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	91575763	91575764	chr14:91575764:G:A	rs11160016	G	A	G	Hoxd3_MA0912.1	0	1	-	7.649543707412044	7.702049204789975	CGTGGCTAATTACAGG
chr14	91654457	91654458	chr14:91654458:G:A	rs1743108	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr14	91920182	91920183	chr14:91920183:C:T	rs7140720	C	T	C	Hoxd3_MA0912.1	14	1	+	8.418787233690532	7.854450787558241	TTGTCTTAATGACTCT
chr14	92046165	92046166	chr14:92046166:C:T	rs111995338	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	92211516	92211517	chr14:92211517:G:A	rs8006143	G	A	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr14	92396833	92396834	chr14:92396834:T:C	rs61367228	T	C	T	Hoxd3_MA0912.1	9	1	+	8.199034921236697	1.310462461671334	CAGAGCTAATTGAAGC
chr14	92420946	92420947	chr14:92420947:A:G	rs12147406	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr14	92549812	92549813	chr14:92549813:T:C	rs942060	T	C	T	Hoxd3_MA0912.1	9	1	+	8.405448703090572	1.5168762435252106	CTGAGCTCATTGCTCT
chr14	92720272	92720273	chr14:92720273:G:C	rs1242118	G	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	92753508	92753509	chr14:92753509:C:G	rs76914265	C	G	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr14	92890443	92890444	chr14:92890444:C:A	rs56137244	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	93330064	93330065	chr14:93330065:T:C	rs12586312	T	C	t	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr14	93893754	93893755	chr14:93893755:C:T	rs17129303	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	93946915	93946916	chr14:93946916:C:G	rs975606209	C	G	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	94077590	94077591	chr14:94077591:C:T	rs11844679	C	T	C	Hoxd3_MA0912.1	3	1	-	7.232924446790699	7.347022197829723	CTGGGGTAAGTACCAT
chr14	94138431	94138432	chr14:94138432:C:G	rs766026416	C	G	.	Hoxd3_MA0912.1	18	0	-	0	0	.
chr14	94171538	94171539	chr14:94171539:T:A	rs75404723	T	A	T	Hoxd3_MA0912.1	14	1	-	8.966214085103532	9.522258334019822	CTGCTCTAATTACCAC
chr14	94435385	94435386	chr14:94435386:G:T	rs4274373	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr14	94536017	94536018	chr14:94536018:C:T	rs1951207	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr14	94575906	94575907	chr14:94575907:G:A	rs112576001	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr14	94650064	94650065	chr14:94650065:G:A	rs116269701	G	A	G	Hoxd3_MA0912.1	12	1	-	7.476327073945734	6.26957515394087	CAGCTGTAATTGCCTT
chr14	94798645	94798646	chr14:94798646:A:G	rs10136119	A	G	A	Hoxd3_MA0912.1	13	1	-	8.08214408801705	8.686380816529423	TTGTGGTCATTGCTCT
chr14	94893567	94893568	chr14:94893568:A:G	rs141831985	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr14	95204960	95204961	chr14:95204961:T:C	rs1187616	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr14	95244128	95244129	chr14:95244129:A:G	rs28437773	A	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr14	95461118	95461119	chr14:95461119:G:C	rs1956121	G	C	G	Hoxd3_MA0912.1	12	1	-	8.185229786925584	7.2177075559865544	ATGGTGTAATTGCTGG
chr14	95461124	95461125	chr14:95461125:A:G	rs17092393	A	G	A	Hoxd3_MA0912.1	6	1	-	8.185229786925584	6.399303838744592	ATGGTGTAATTGCTGG
chr14	95490234	95490235	chr14:95490235:G:C	rs734313	G	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr14	95774388	95774389	chr14:95774389:C:T	rs77539504	C	T	C	Hoxd3_MA0912.1	0	1	+	7.8162704681834025	7.868775965561332	CTGAGGCCATTAAACC
chr14	95811032	95811033	chr14:95811033:C:T	rs34979168	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr14	96123022	96123023	chr14:96123023:T:C	rs11160311	T	C	T	Hoxd3_MA0912.1	7	1	-	8.309001364951177	1.5293181223207493	CTCATTCAATTACACT
chr14	96148799	96148800	chr14:96148800:A:G	rs68023675	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr14	96148806	96148807	chr14:96148807:G:A	rs2151766	G	A	g	Hoxd3_MA0912.1	5	1	+	8.479724453436058	7.755161076642734	TTGTTGTAATGACCTG
chr14	96260545	96260546	chr14:96260546:T:G	rs10143977	T	G	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr14	96502265	96502266	chr14:96502266:G:C	rs758821658	G	C	G	Hoxd3_MA0912.1	2	1	+	7.309642756414202	5.526168338720255	AGGGGGTAATTGCCGG
chr14	96502266	96502267	chr14:96502267:G:T	rs7160148	G	T	T	Hoxd3_MA0912.1	3	1	+	7.309642756414202	6.859404061320935	AGGGGGTAATTGCCGG
chr14	96747096	96747097	chr14:96747097:G:A	rs79210236	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	96750906	96750907	chr14:96750907:C:T	rs55967054	C	T	T	Hoxd3_MA0912.1	2	1	-	10.542561645442065	9.092726601285026	TTGAATTAATTACATG
chr14	96947942	96947943	chr14:96947943:A:G	rs55968162	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr14	97177881	97177882	chr14:97177882:T:C	rs7149560	T	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr14	97841946	97841947	chr14:97841947:A:G	rs78885320	A	G	A	Hoxd3_MA0912.1	3	1	-	8.598378555112658	7.8616973325329855	GTGTTGTAATTATCCT
chr14	98548794	98548795	chr14:98548795:G:A	rs11845429	G	A	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr14	98798378	98798379	chr14:98798379:T:C	rs1015226	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr14	98921497	98921498	chr14:98921498:T:C	rs200330	T	C	T	Hoxd3_MA0912.1	1	1	+	8.690742861876394	6.606682374340266	ATGATTCAATTACCTC
chr14	99093715	99093716	chr14:99093716:G:A	rs12588695	G	A	g	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr14	99316241	99316242	chr14:99316242:C:T	rs8018158	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr14	99531374	99531375	chr14:99531375:A:G	rs144983686	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr14	99580318	99580319	chr14:99580319:C:T	rs535008175	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr14	99758658	99758659	chr14:99758659:G:A	rs145166270	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr14	100362698	100362699	chr14:100362699:T:C	rs1156898263	T	C	T	Hoxd3_MA0912.1	9	1	+	7.909326534076966	1.0207540745116026	TTCTGGTAATTGGCCT
chr14	100526662	100526663	chr14:100526663:C:G	rs371947363	C	G	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr14	100620129	100620130	chr14:100620130:C:A	rs1190884	C	A	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr14	101082218	101082219	chr14:101082219:G:A	rs61991709	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	101111585	101111586	chr14:101111586:T:C	rs146608995	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr14	101172458	101172459	chr14:101172459:A:G	rs7161730	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr14	101173714	101173715	chr14:101173715:T:C	rs59447934	T	C	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr14	101373671	101373672	chr14:101373672:G:T	rs72709510	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr14	101413538	101413539	chr14:101413539:A:G	rs4900507	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr14	101591948	101591949	chr14:101591949:G:C	rs75710497	G	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr14	101716932	101716933	chr14:101716933:T:C	rs72715612	T	C	c	Hoxd3_MA0912.1	0	1	-	9.067266076142204	7.746818280819901	ATGAGATAATTACAAC
chr14	101998666	101998667	chr14:101998667:G:C	rs2720213	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr14	102139570	102139571	chr14:102139571:G:A	rs35538974	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr14	102139574	102139575	chr14:102139575:C:G	rs116641992	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr14	102253282	102253283	chr14:102253283:A:G	rs3783372	A	G	G	Hoxd3_MA0912.1	1	1	-	8.977658148502362	6.893597660966231	ATGTGCTAATTGCCCC
chr14	102907096	102907097	chr14:102907097:C:G	rs72704737	C	G	C	Hoxd3_MA0912.1	2	1	-	9.150657959211014	7.367183541517065	CTGTGGTAATTAAGCA
chr14	102993859	102993860	chr14:102993860:T:G	rs28696240	T	G	G	Hoxd3_MA0912.1	10	1	+	8.839110964981597	6.865168598801077	CAAGGATAATTACACT
chr14	102993877	102993878	chr14:102993878:C:T	rs2269323	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr14	103161067	103161068	chr14:103161068:C:T	rs181131391	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr14	103257560	103257561	chr14:103257561:T:A	chr14:103257561:T:A	T	A	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr14	103325814	103325815	chr14:103325815:G:A	rs11160745	G	A	g	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr14	103376312	103376313	chr14:103376313:A:G	rs8013228	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr14	103504182	103504183	chr14:103504183:C:T	rs574638539	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr14	103749955	103749956	chr14:103749956:C:T	rs2295140	C	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr14	104157246	104157247	chr14:104157247:A:G	rs79713436	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr14	104422173	104422174	chr14:104422174:G:A	rs4332683	G	A	A	Hoxd3_MA0912.1	1	1	-	9.47701980140358	11.561080288939712	CCGAACTAATTAATCT
chr14	104499228	104499229	chr14:104499229:T:G	rs11628928	T	G	t	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr14	104692033	104692034	chr14:104692034:A:G	rs12889389	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr14	104967084	104967085	chr14:104967085:T:C	rs111512781	T	C	T	Hoxd3_MA0912.1	9	1	+	6.32391413487969	-0.5646583246856729	CTGGGGTCATGAGTGG
chr14	105046268	105046269	chr14:105046269:A:G	rs775217296	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr14	105294475	105294476	chr14:105294476:G:A	rs116708275	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr14	105536014	105536015	chr14:105536015:C:A	rs8021330	C	A	.	Hoxd3_MA0912.1	12	1	+	8.265513793903338	8.265513793903338	TAGTGGCAATTACATT
chr14	105835393	105835394	chr14:105835394:T:C	rs7148210	T	C	.	Hoxd3_MA0912.1	6	1	+	12.286022200229903	10.50009625204891	TTGAGATAATTACCCT
chr14	105861855	105861856	chr14:105861856:A:G	rs1950942	A	G	.	Hoxd3_MA0912.1	9	1	-	10.401014893646503	3.5124424340811395	ATGTGATAATTAATCT
chr14	105898446	105898447	chr14:105898447:C:T	rs112403508	C	T	.	Hoxd3_MA0912.1	22	0	-	0	0	.
chr14	106039597	106039598	chr14:106039598:A:G	rs4774051	A	G	.	Hoxd3_MA0912.1	23	0	-	0	0	.
chr14	106327372	106327373	chr14:106327373:T:C	rs1345879780	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr14	106327374	106327375	chr14:106327375:T:C	rs1312056885	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr14	106414677	106414678	chr14:106414678:T:C	rs73363875	T	C	N	Hoxd3_MA0912.1	9	1	+	9.29837723367611	2.4098047741107465	TTGAATTAATTAGACA
chr14	106562509	106562510	chr14:106562510:A:G	rs11160992	A	G	a	Hoxd3_MA0912.1	9	1	-	9.028540815419685	2.139968355854323	AAAGGTTAATTACACT
chr14	106562724	106562725	chr14:106562725:A:G	rs11160994	A	G	g	Hoxd3_MA0912.1	18	0	+	0	0	.
chr14	106625209	106625210	chr14:106625210:A:G	rs2516940	A	G	N	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr14	106683805	106683806	chr14:106683806:C:T	rs9324092	C	T	t	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr14	106787729	106787730	chr14:106787730:G:A	rs10136817	G	A	.	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr14	106845079	106845080	chr14:106845080:C:T	rs73387527	C	T	.	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr15	20287729	20287730	chr15:20287730:G:A	rs866203574	G	A	-	Hoxd3_MA0912.1	29	0	+	0	0	.
chr15	20292276	20292277	chr15:20292277:T:A	rs4247643	T	A	-	Hoxd3_MA0912.1	0	1	-	9.694289949850058	10.410724081788794	ATTGGGTAATTAAATT
chr15	20292294	20292295	chr15:20292295:G:A	rs199889043	G	A	-	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr15	20667433	20667434	chr15:20667434:C:T	rs12594425	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	21264714	21264715	chr15:21264715:C:A	rs11248819	C	A	.	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	22801301	22801302	chr15:22801302:A:G	rs565942413	A	G	a	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	23579598	23579599	chr15:23579599:T:G	rs7495382	T	G	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	25543864	25543865	chr15:25543865:G:C	rs80142747	G	C	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr15	25543868	25543869	chr15:25543869:A:G	rs75157201	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	25544257	25544258	chr15:25544258:T:C	rs17794409	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	25802887	25802888	chr15:25802888:G:A	rs872538	G	A	g	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr15	25861085	25861086	chr15:25861086:A:G	rs7166725	A	G	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr15	25861109	25861110	chr15:25861110:T:G	rs12906552	T	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr15	25861110	25861111	chr15:25861111:C:G	rs7166023	C	G	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	25982201	25982202	chr15:25982202:A:T	rs34487669	A	T	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr15	25998577	25998578	chr15:25998578:G:A	rs61994483	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr15	26033975	26033976	chr15:26033976:C:T	rs58987117	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr15	26223062	26223063	chr15:26223063:A:G	rs28585639	A	G	G	Hoxd3_MA0912.1	13	1	+	8.050676377732563	7.076835195531855	CTGAAATCATTACAGG
chr15	26891419	26891420	chr15:26891420:A:G	rs145342878	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	27127207	27127208	chr15:27127208:G:T	rs1029935	G	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr15	27413256	27413257	chr15:27413257:A:G	rs72705749	A	G	A	Hoxd3_MA0912.1	3	1	-	9.895734659145889	9.159053436566214	TTGTTGTAATTACTTC
chr15	27482229	27482230	chr15:27482230:C:T	rs12440460	C	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	27549361	27549362	chr15:27549362:G:A	rs4778154	G	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	27619941	27619942	chr15:27619942:T:C	rs11635745	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	27827449	27827450	chr15:27827450:C:T	rs6497243	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr15	27827453	27827454	chr15:27827454:G:A	rs6497244	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	27899923	27899924	chr15:27899924:C:G	rs2594898	C	G	g	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	28112083	28112084	chr15:28112084:T:C	rs4778245	T	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	28458669	28458670	chr15:28458670:A:T	rs62007400	A	T	a	Hoxd3_MA0912.1	1	1	-	9.053601242387993	7.827365028226055	ATGATTTAATTATAGC
chr15	28873813	28873814	chr15:28873814:C:T	rs142327415	C	T	.	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	28955265	28955266	chr15:28955266:C:T	rs16954816	C	T	C	Hoxd3_MA0912.1	5	1	-	7.038244082583573	6.313680705790249	ATGGGGCAATGAAACC
chr15	28992525	28992526	chr15:28992526:G:A	rs60946455	G	A	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	29129984	29129985	chr15:29129985:C:G	rs2636064	C	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr15	29531972	29531973	chr15:29531973:C:T	rs1455821237	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr15	30073973	30073974	chr15:30073974:G:A	rs73375195	G	A	.	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr15	30922445	30922446	chr15:30922446:A:G	rs1474382	A	G	A	Hoxd3_MA0912.1	10	1	-	8.94446962548463	2.164786382854202	ATGTTCTAATTACATG
chr15	31016174	31016175	chr15:31016175:T:C	rs16956455	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr15	31198505	31198506	chr15:31198506:A:C	rs1865871	A	C	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	31206805	31206806	chr15:31206806:C:A	rs74013327	C	A	C	Hoxd3_MA0912.1	14	1	+	9.091001162026789	7.9706204669782075	CTGTGATAATGACTCT
chr15	31280400	31280401	chr15:31280401:G:C	rs539552783	G	C	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr15	31286243	31286244	chr15:31286244:T:C	rs35307599	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	31390722	31390723	chr15:31390723:T:A	rs34682798	T	A	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr15	31403683	31403684	chr15:31403684:C:T	rs115912017	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr15	31507945	31507946	chr15:31507946:A:G	rs2125615	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	32744157	32744158	chr15:32744158:T:C	rs11855969	T	C	T	Hoxd3_MA0912.1	2	1	+	10.049380212521015	9.58309636437781	TTTTTTTAATTACACT
chr15	32856885	32856886	chr15:32856886:G:A	rs8032931	G	A	G	Hoxd3_MA0912.1	2	1	+	8.071307250951438	6.6214722067944	ATGGGCTAATGAAATC
chr15	32987187	32987188	chr15:32987188:C:T	rs79308314	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	33005079	33005080	chr15:33005080:C:A	rs28436666	C	A	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr15	33095828	33095829	chr15:33095829:G:A	rs2604169	G	A	A	Hoxd3_MA0912.1	5	1	+	10.0852534861456	9.360690109352277	ATGATGTAATTACTGG
chr15	33185020	33185021	chr15:33185021:C:T	rs16966391	C	T	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr15	33292846	33292847	chr15:33292847:A:G	rs989793268	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr15	33314427	33314428	chr15:33314428:C:T	rs1050491545	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	33442914	33442915	chr15:33442915:T:C	rs16970977	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr15	33471386	33471387	chr15:33471387:T:C	rs2676099	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	33587406	33587407	chr15:33587407:A:G	rs10153042	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr15	34110142	34110143	chr15:34110143:A:G	rs75162771	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr15	34182940	34182941	chr15:34182941:C:T	rs11857205	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	34225242	34225243	chr15:34225243:A:T	chr15:34225243:A:T	A	T	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr15	34225264	34225265	chr15:34225265:T:A	rs60202027	T	A	T	Hoxd3_MA0912.1	1	1	-	8.24680395755823	9.473040171720168	CAGGTCTCATTACTCT
chr15	34258880	34258881	chr15:34258881:G:A	rs7164902	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	34271860	34271861	chr15:34271861:A:C	rs347819	A	C	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr15	34583609	34583610	chr15:34583610:G:T	rs2655326	G	T	g	Hoxd3_MA0912.1	32	0	-	0	0	.
chr15	34583660	34583661	chr15:34583661:T:G	rs897320676	T	G	t	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr15	34588365	34588366	chr15:34588366:T:G	rs4924050	T	G	g	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	34588368	34588369	chr15:34588369:G:A	rs1300097834	G	A	g	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr15	34610587	34610588	chr15:34610588:T:G	rs143339655	T	G	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr15	35141734	35141735	chr15:35141735:G:T	rs2054254	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr15	35508112	35508113	chr15:35508113:G:A	rs79053842	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr15	35545789	35545790	chr15:35545790:T:C	rs1867344	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	35545791	35545792	chr15:35545792:G:C	rs4398069	G	C	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr15	35658184	35658185	chr15:35658185:C:T	rs11073106	C	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	35658235	35658236	chr15:35658236:C:G	rs11073107	C	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr15	36074020	36074021	chr15:36074021:C:T	rs812584	C	T	T	Hoxd3_MA0912.1	0	1	+	10.2872389596193	10.339744456997229	CTGATATAATTACCTC
chr15	36357390	36357391	chr15:36357391:G:A	rs576122604	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	36432155	36432156	chr15:36432156:T:A	rs877652	T	A	T	Hoxd3_MA0912.1	3	1	-	7.676673425201079	7.11233697906879	CAGAGGCAATTACACA
chr15	36578637	36578638	chr15:36578638:T:C	rs6495840	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	36580285	36580286	chr15:36580286:G:C	rs4924085	G	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr15	36580296	36580297	chr15:36580297:T:A	rs11638468	T	A	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	36883955	36883956	chr15:36883956:G:C	rs149278603	G	C	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	36888027	36888028	chr15:36888028:G:A	rs1450414	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	37031211	37031212	chr15:37031212:G:A	rs191183929	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr15	37092082	37092083	chr15:37092083:A:G	rs2701523	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr15	37147248	37147249	chr15:37147249:C:T	rs8027377	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr15	37360516	37360517	chr15:37360517:C:G	rs76479237	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr15	37587142	37587143	chr15:37587143:A:G	rs62045892	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr15	38223916	38223917	chr15:38223917:C:G	rs2890893	C	G	C	Hoxd3_MA0912.1	14	1	+	9.515516295621754	9.339100930337306	ATAAAATAATTAACCT
chr15	38453035	38453036	chr15:38453036:A:T	rs12905334	A	T	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	38577464	38577465	chr15:38577465:G:A	rs17651741	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr15	38879847	38879848	chr15:38879848:G:A	rs17660503	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr15	39022943	39022944	chr15:39022944:T:C	rs74599331	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr15	39158002	39158003	chr15:39158003:A:G	rs16968273	A	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	39166090	39166091	chr15:39166091:C:A	rs2062062	C	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr15	39192554	39192555	chr15:39192555:G:A	rs1371967	G	A	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	39325093	39325094	chr15:39325094:T:C	rs56003663	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	39498539	39498540	chr15:39498540:G:C	rs17702778	G	C	G	Hoxd3_MA0912.1	3	1	+	8.340910692357596	7.153990774684655	CTGGGATAATTGCTTG
chr15	39499273	39499274	chr15:39499274:T:C	rs143883041	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	39587107	39587108	chr15:39587108:G:A	rs1904209	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	39624315	39624316	chr15:39624316:G:C	rs7169574	G	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr15	39837002	39837003	chr15:39837003:A:C	rs10520154	A	C	A	Hoxd3_MA0912.1	1	1	-	11.35590626753485	9.27184577999872	TTCAGTTAATTACCCT
chr15	40106588	40106589	chr15:40106589:T:A	rs144511634	T	A	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr15	41133562	41133563	chr15:41133563:C:T	rs58952535	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr15	41133573	41133574	chr15:41133574:C:T	rs116679528	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr15	41564425	41564426	chr15:41564426:G:T	rs925960371	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	41621074	41621075	chr15:41621075:A:G	rs145642223	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	41887012	41887013	chr15:41887013:T:C	rs1197694	T	C	C	Hoxd3_MA0912.1	5	1	+	7.547901358861422	7.230579916975014	CTGGGTCCATTACCCA
chr15	42457277	42457278	chr15:42457278:C:T	rs62022313	C	T	C	Hoxd3_MA0912.1	5	1	+	9.862913408403495	10.180234850289903	TAGTGCTAATTAATTT
chr15	43372053	43372054	chr15:43372054:C:T	rs75628701	C	T	C	Hoxd3_MA0912.1	15	1	-	8.190437763833978	7.3494391368747625	CTCTGTTAATTACTAG
chr15	44030502	44030503	chr15:44030503:C:G	chr15:44030503:C:G	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr15	44722462	44722463	chr15:44722463:A:T	rs17588081	A	T	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	44727060	44727061	chr15:44727061:T:C	rs72720022	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	44784015	44784016	chr15:44784016:T:C	rs1669833	T	C	N	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr15	44863717	44863718	chr15:44863718:T:G	rs113344425	T	G	N	Hoxd3_MA0912.1	26	0	+	0	0	.
chr15	44916573	44916574	chr15:44916574:A:G	rs397358	A	G	-	Hoxd3_MA0912.1	1	1	-	8.42387018935871	6.339809701822579	CTGGGCTAATTGCAGA
chr15	45339669	45339670	chr15:45339670:A:G	rs1153862	A	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr15	45387219	45387220	chr15:45387220:T:G	rs149323827	T	G	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr15	46786522	46786523	chr15:46786523:C:T	rs10519079	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr15	47158807	47158808	chr15:47158808:A:G	rs1823919	A	G	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr15	47196323	47196324	chr15:47196324:G:A	rs282507	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr15	47289932	47289933	chr15:47289933:A:G	rs111597856	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr15	47523857	47523858	chr15:47523858:C:T	rs1797242	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr15	47602338	47602339	chr15:47602339:G:A	rs72735813	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr15	47643261	47643262	chr15:47643262:C:T	rs1224673	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr15	47919737	47919738	chr15:47919738:A:G	rs2965306	A	G	A	Hoxd3_MA0912.1	12	1	+	10.690036932513106	9.722514701574076	ATGTGTTAATTAATTT
chr15	48006375	48006376	chr15:48006376:G:A	rs138095102	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr15	48555833	48555834	chr15:48555834:C:A	chr15:48555834:C:A	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr15	48828510	48828511	chr15:48828511:T:C	rs62009416	T	C	T	Hoxd3_MA0912.1	9	1	+	9.189726116051226	2.3011536564858623	TTTGGATAATTACCCA
chr15	48929055	48929056	chr15:48929056:T:C	rs11070665	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr15	48929087	48929088	chr15:48929088:G:A	rs72741915	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr15	49139818	49139819	chr15:49139819:C:T	rs489813	C	T	T	Hoxd3_MA0912.1	5	1	-	9.836133109305234	9.111569732511908	TTAAGGTAATTACAAT
chr15	49392808	49392809	chr15:49392809:G:A	rs8030457	G	A	G	Hoxd3_MA0912.1	14	1	-	9.136185330065416	8.571848883933125	TTGAAATAATTAGGCT
chr15	49471385	49471386	chr15:49471386:A:G	rs7167625	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr15	49708074	49708075	chr15:49708075:C:T	rs7180421	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr15	49739725	49739726	chr15:49739726:T:C	rs555902	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr15	49832688	49832689	chr15:49832689:G:A	rs11070724	G	A	G	Hoxd3_MA0912.1	4	1	+	9.027058035455353	8.422821306942978	CAGTGTTAATTACTCA
chr15	49844585	49844586	chr15:49844586:T:A	rs7180532	T	A	T	Hoxd3_MA0912.1	1	1	-	9.232680347222939	10.458916561384878	TATGGGTAATTAACAT
chr15	49877637	49877638	chr15:49877638:G:T	rs112104890	G	T	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr15	49979887	49979888	chr15:49979888:A:G	rs8034382	A	G	a	Hoxd3_MA0912.1	15	1	+	8.258302708589287	9.099301335548503	ATGATCTAATTACGCA
chr15	50311831	50311832	chr15:50311832:T:C	rs58035812	T	C	T	Hoxd3_MA0912.1	5	1	-	8.556270039303282	9.280833416096606	TTCTTATAATTACCCC
chr15	50543556	50543557	chr15:50543557:G:A	rs78442219	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr15	50822888	50822889	chr15:50822889:G:A	rs9302158	G	A	A	Hoxd3_MA0912.1	11	1	+	7.779520003297188	9.565445951478182	TTGGTCTCATTGCCTT
chr15	50865036	50865037	chr15:50865037:G:A	rs77752166	G	A	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	50883938	50883939	chr15:50883939:T:C	rs2614779	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	50884638	50884639	chr15:50884639:T:C	rs2614780	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	51129892	51129893	chr15:51129893:C:T	rs1111266	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	51382878	51382879	chr15:51382879:A:G	rs2414103	A	G	G	Hoxd3_MA0912.1	4	1	+	8.929972719268795	9.53420944778117	CTTGAGTAATTACATG
chr15	51600307	51600308	chr15:51600308:C:T	rs138690049	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr15	52294716	52294717	chr15:52294717:C:G	rs78175543	C	G	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr15	52294725	52294726	chr15:52294726:T:C	rs4516170	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr15	52539646	52539647	chr15:52539647:C:T	rs1693527	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr15	52568042	52568043	chr15:52568043:C:G	rs185951854	C	G	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	52780536	52780537	chr15:52780537:C:T	rs79402245	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	52802479	52802480	chr15:52802480:T:C	rs55781920	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr15	53171765	53171766	chr15:53171766:A:G	rs1126321	A	G	C	Hoxd3_MA0912.1	8	1	+	7.79870690582846	0.9101344462630975	TGGGATTAATGACCTT
chr15	53716836	53716837	chr15:53716837:G:A	rs35027152	G	A	g	Hoxd3_MA0912.1	15	1	+	7.560394702093111	6.719396075133895	TTGTGGTCATTAGCAG
chr15	53869822	53869823	chr15:53869823:A:G	rs1382231	A	G	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr15	54364751	54364752	chr15:54364752:C:A	rs7162826	C	A	C	Hoxd3_MA0912.1	13	1	+	8.87092627639646	8.266689547884086	ATGACTTAATGAACCT
chr15	54779953	54779954	chr15:54779954:C:T	rs2651758	C	T	T	Hoxd3_MA0912.1	0	1	+	8.117387117254149	8.16989261463208	CTCGGCTCATTACAGT
chr15	54896289	54896290	chr15:54896290:C:G	rs28453907	C	G	G	Hoxd3_MA0912.1	2	1	+	8.349766508506244	10.133240926200193	CTCGTATAATTACTCC
chr15	55255194	55255195	chr15:55255195:A:G	chr15:55255195:A:G	A	G	A	Hoxd3_MA0912.1	13	1	-	9.186908590976042	9.791145319488416	TTCTGTTAATTACTGG
chr15	55372890	55372891	chr15:55372891:T:C	rs8041885	T	C	C	Hoxd3_MA0912.1	0	1	-	8.881590772580227	7.561142977257923	ATGGGCTAATTAGGTT
chr15	55375370	55375371	chr15:55375371:T:G	rs7177888	T	G	G	Hoxd3_MA0912.1	11	1	-	8.955358619974707	2.210722450562378	CTGGTTTAATTAGAGA
chr15	55567596	55567597	chr15:55567597:A:G	rs11636163	A	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	55567599	55567600	chr15:55567600:C:G	rs115432440	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	55758828	55758829	chr15:55758829:C:T	rs73410278	C	T	C	Hoxd3_MA0912.1	2	1	-	8.022717482214196	6.572882438057158	CTGTTTTAATGAGCGC
chr15	55786241	55786242	chr15:55786242:A:G	rs4288941	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	55786248	55786249	chr15:55786249:C:G	rs4300580	C	G	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr15	55870964	55870965	chr15:55870965:C:T	rs66857236	C	T	C	Hoxd3_MA0912.1	12	1	+	9.339652322258834	8.13290040225397	ATGTAGCAATTACCCT
chr15	55907383	55907384	chr15:55907384:C:T	rs17819294	C	T	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	55942651	55942652	chr15:55942652:G:C	rs10744958	G	C	C	Hoxd3_MA0912.1	14	1	+	7.758216147401935	7.934631512686383	GTGAGTCAATTACAGC
chr15	56235078	56235079	chr15:56235079:G:A	rs2414468	G	A	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	56320755	56320756	chr15:56320756:G:C	rs1402171	G	C	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	56356720	56356721	chr15:56356721:G:C	rs192291663	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr15	57227319	57227320	chr15:57227320:C:T	rs2414493	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr15	57235523	57235524	chr15:57235524:A:G	rs1867641	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr15	57261475	57261476	chr15:57261476:C:G	rs5014892	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	57287317	57287318	chr15:57287318:A:G	rs12438324	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr15	57311022	57311023	chr15:57311023:G:T	rs2440943	G	T	G	Hoxd3_MA0912.1	0	1	-	8.03571955836639	7.371790923805585	CTGAAGCAATTACGGC
chr15	57312526	57312527	chr15:57312527:T:G	rs138831616	T	G	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	57312532	57312533	chr15:57312533:A:C	rs528231988	A	C	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	57339608	57339609	chr15:57339609:G:A	rs147329332	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr15	57350891	57350892	chr15:57350892:C:T	rs7177243	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	57460521	57460522	chr15:57460522:A:T	rs61998128	A	T	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	57492924	57492925	chr15:57492925:T:C	rs1280367	T	C	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr15	57495334	57495335	chr15:57495335:A:T	rs1280369	A	T	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	57503846	57503847	chr15:57503847:G:C	rs12185112	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	57522218	57522219	chr15:57522219:C:T	rs75812735	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr15	57527808	57527809	chr15:57527809:C:G	chr15:57527809:C:G	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	57532717	57532718	chr15:57532718:A:G	rs1690337	A	G	a	Hoxd3_MA0912.1	33	0	+	0	0	.
chr15	57782941	57782942	chr15:57782942:C:T	rs76437214	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	57922180	57922181	chr15:57922181:T:C	rs1441827	T	C	T	Hoxd3_MA0912.1	1	1	+	8.35280906390593	6.2687485763698	ATGTGTTAATGAGCTT
chr15	57922183	57922184	chr15:57922184:G:A	rs12594689	G	A	G	Hoxd3_MA0912.1	4	1	+	8.35280906390593	7.748572335393558	ATGTGTTAATGAGCTT
chr15	58240384	58240385	chr15:58240385:G:T	rs12908890	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr15	58431387	58431388	chr15:58431388:G:T	rs35588604	G	T	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr15	58555607	58555608	chr15:58555608:T:C	rs41294813	T	C	T	Hoxd3_MA0912.1	1	1	-	10.089550607551773	9.231726334177582	CAGTGTTAATTATCCT
chr15	58627799	58627800	chr15:58627800:T:C	rs79522282	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	59296549	59296550	chr15:59296550:T:C	rs73426914	T	C	T	Hoxd3_MA0912.1	9	1	+	7.5772185877595675	0.6886461281942056	TGGGCTTAATTGCCCT
chr15	59296567	59296568	chr15:59296568:C:T	rs28454018	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr15	59394506	59394507	chr15:59394507:A:G	rs35769983	A	G	A	Hoxd3_MA0912.1	1	1	-	8.667740871435583	6.583680383899453	TTGTGGTAATTGAATG
chr15	59517454	59517455	chr15:59517455:A:C	rs74738664	A	C	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr15	59687864	59687865	chr15:59687865:T:C	rs6151448	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	60077900	60077901	chr15:60077901:C:T	rs335806	C	T	C	Hoxd3_MA0912.1	2	1	-	8.450208510440675	7.000373466283635	CTGGTTTAATGAACAG
chr15	60186225	60186226	chr15:60186226:T:C	rs62004045	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	60228778	60228779	chr15:60228779:G:C	rs185935098	G	C	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr15	60902034	60902035	chr15:60902035:A:G	rs2899663	A	G	A	Hoxd3_MA0912.1	2	1	-	9.51433391953806	9.048050071394856	TATGGTTAATTAGCCT
chr15	60905357	60905358	chr15:60905358:C:G	rs12148098	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr15	60970763	60970764	chr15:60970764:T:G	rs72752790	T	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	61155757	61155758	chr15:61155758:T:C	rs142237644	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	61442522	61442523	chr15:61442523:G:T	rs12592713	G	T	G	Hoxd3_MA0912.1	3	1	+	8.834652104555543	8.384413409462276	CTTGTGTAATTAGCAT
chr15	61442551	61442552	chr15:61442552:C:T	rs35391470	C	T	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr15	61621445	61621446	chr15:61621446:G:A	rs2414713	G	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr15	61731318	61731319	chr15:61731319:T:G	rs12914538	T	G	T	Hoxd3_MA0912.1	10	1	+	8.399747879243492	6.425805513062974	CTAGTGCAATTACTCT
chr15	61748959	61748960	chr15:61748960:G:A	rs17237964	G	A	G	Hoxd3_MA0912.1	10	1	+	7.118099961515396	2.312359085065487	TGGGGCTAATGAGCTT
chr15	61791436	61791437	chr15:61791437:C:G	rs17238012	C	G	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr15	61830785	61830786	chr15:61830786:C:T	rs78418780	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr15	62087771	62087772	chr15:62087772:A:G	rs7177711	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr15	62241313	62241314	chr15:62241314:A:G	rs140954019	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	62295423	62295424	chr15:62295424:C:T	rs62004705	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr15	62295450	62295451	chr15:62295451:G:C	rs11856956	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr15	62774606	62774607	chr15:62774607:A:C	rs1353694	A	C	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr15	62829284	62829285	chr15:62829285:T:C	rs4775546	T	C	T	Hoxd3_MA0912.1	8	1	-	7.934631512686383	1.0460590531210199	GTGAGTCAATTAAACC
chr15	62879883	62879884	chr15:62879884:C:T	rs4284587	C	T	C	Hoxd3_MA0912.1	4	1	-	7.934631512686383	7.330394784174008	GTGAGTCAATTAAACC
chr15	62948568	62948569	chr15:62948569:A:G	rs12594368	A	G	G	Hoxd3_MA0912.1	4	1	+	8.333521137609903	8.937757866122277	ATGAACCAATTAAACC
chr15	62955239	62955240	chr15:62955240:T:G	rs2414805	T	G	g	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	63052394	63052395	chr15:63052395:T:G	rs114835967	T	G	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	63083216	63083217	chr15:63083217:T:C	rs118078473	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr15	63203711	63203712	chr15:63203712:C:T	rs77612485	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	63390905	63390906	chr15:63390906:A:G	rs150403198	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr15	63407804	63407805	chr15:63407805:T:C	rs290560	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr15	63446372	63446373	chr15:63446373:C:G	rs11637652	C	G	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	63451197	63451198	chr15:63451198:C:T	rs12908654	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr15	63472305	63472306	chr15:63472306:T:C	rs751940	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	63485462	63485463	chr15:63485463:C:T	rs4984292	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	63564344	63564345	chr15:63564345:C:A	rs6494412	C	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	63564353	63564354	chr15:63564354:A:G	rs8034068	A	G	A	Hoxd3_MA0912.1	9	1	-	8.377411626571664	1.4888391670063024	TTTTGGTCATTACCCC
chr15	63596821	63596822	chr15:63596822:A:G	rs75337213	A	G	A	Hoxd3_MA0912.1	3	1	+	7.811799036000405	7.697701284961383	TGGAGACAATTACTCT
chr15	63596822	63596823	chr15:63596823:G:A	rs4984251	G	A	G	Hoxd3_MA0912.1	4	1	+	7.811799036000405	7.207562307488031	TGGAGACAATTACTCT
chr15	63719605	63719606	chr15:63719606:T:C	rs79503123	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr15	63896849	63896850	chr15:63896850:C:T	rs116946776	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	63925645	63925646	chr15:63925646:G:C	rs11853632	G	C	G	Hoxd3_MA0912.1	7	1	-	8.943446465828618	4.137705589378709	TAGGGCTCATTACCTT
chr15	64073140	64073141	chr15:64073141:C:T	rs4622459	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr15	64093651	64093652	chr15:64093652:T:C	rs332259	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr15	64809926	64809927	chr15:64809927:T:C	rs76070206	T	C	T	Hoxd3_MA0912.1	8	1	-	9.506075862441572	2.617503402876209	TTGTGCTCATTAACCC
chr15	64810177	64810178	chr15:64810178:G:A	rs151281350	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	64870574	64870575	chr15:64870575:G:A	rs12439917	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr15	65043054	65043055	chr15:65043055:C:A	rs140141719	C	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	65533422	65533423	chr15:65533423:C:A	rs939417130	C	A	C	Hoxd3_MA0912.1	5	1	-	9.222928863022815	9.351723971228386	CTGTAGCAATTACAGT
chr15	65596020	65596021	chr15:65596021:G:T	rs7165102	G	T	T	Hoxd3_MA0912.1	2	1	+	8.9894426310845	7.672252061533756	TTGATTTAATGAGTCT
chr15	65610583	65610584	chr15:65610584:G:A	rs6494529	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr15	65931011	65931012	chr15:65931012:A:G	rs11631506	A	G	A	Hoxd3_MA0912.1	10	1	-	8.437051828258952	1.657368585628523	CAGGGGTCATTATCCT
chr15	66012577	66012578	chr15:66012578:A:G	rs441949	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	66069989	66069990	chr15:66069990:C:T	rs12905091	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	66115751	66115752	chr15:66115752:T:C	rs72744438	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	66115753	66115754	chr15:66115754:T:C	rs72744439	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr15	66151664	66151665	chr15:66151665:C:G	rs7162499	C	G	C	Hoxd3_MA0912.1	15	1	-	8.181029582860015	8.2273341509017	CAGAGCTAATGACCTG
chr15	66189167	66189168	chr15:66189168:C:T	rs8034534	C	T	C	Hoxd3_MA0912.1	13	1	+	8.84002635459981	8.235789626087437	TTAACCTAATTACCGC
chr15	66189172	66189173	chr15:66189173:C:A	rs12148773	C	A	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr15	66222079	66222080	chr15:66222080:C:T	rs7183784	C	T	C	Hoxd3_MA0912.1	5	1	-	10.524821832827818	9.800258456034493	TTTTAGTAATTACCCT
chr15	66388724	66388725	chr15:66388725:A:G	rs142235889	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	66405602	66405603	chr15:66405603:G:A	rs80354479	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	66629624	66629625	chr15:66629625:G:C	rs4776806	G	C	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr15	66775456	66775457	chr15:66775457:C:T	rs4072640	C	T	c	Hoxd3_MA0912.1	34	0	-	0	0	.
chr15	66828232	66828233	chr15:66828233:G:A	rs4776323	G	A	A	Hoxd3_MA0912.1	14	1	+	6.526853852186516	5.582888522422382	CTGCTGCAATTGCCGC
chr15	66969690	66969691	chr15:66969691:A:G	rs378092	A	G	A	Hoxd3_MA0912.1	14	1	+	8.534321218693744	9.478286548457877	TTGATGTCATTAACAC
chr15	67049471	67049472	chr15:67049472:C:T	rs12911494	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	67078157	67078158	chr15:67078158:G:A	rs78800186	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	67078167	67078168	chr15:67078168:C:G	rs12901372	C	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr15	67098646	67098647	chr15:67098647:G:A	rs189286879	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	67102159	67102160	chr15:67102160:C:G	rs8040513	C	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	67102199	67102200	chr15:67102200:G:A	rs539602884	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr15	67162039	67162040	chr15:67162040:T:G	rs79483120	T	G	T	Hoxd3_MA0912.1	7	1	-	9.041517782903696	7.067575416723177	AGGATGTAATTACCTT
chr15	67373227	67373228	chr15:67373228:A:G	rs34983272	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	67373232	67373233	chr15:67373233:T:A	rs76024542	T	A	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	67625507	67625508	chr15:67625508:C:T	rs4776952	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	67741524	67741525	chr15:67741525:C:T	rs183663206	C	T	C	Hoxd3_MA0912.1	10	1	-	7.687114223539176	2.8813733470892666	CTGGTCCAATGAAACT
chr15	67916479	67916480	chr15:67916480:C:T	rs77198714	C	T	C	Hoxd3_MA0912.1	14	1	+	9.836012090065298	9.271675643933007	TTTATTTAATTAATCC
chr15	68126716	68126717	chr15:68126717:G:A	rs186047487	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr15	68399357	68399358	chr15:68399358:T:G	rs12591421	T	G	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr15	68435828	68435829	chr15:68435829:C:T	rs12441729	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	68679878	68679879	chr15:68679879:C:T	rs12901895	C	T	C	Hoxd3_MA0912.1	2	1	-	8.900077225928648	7.450242181771609	CCGAGGTAATGACCCT
chr15	68783134	68783135	chr15:68783135:G:A	rs2290428	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	69092297	69092298	chr15:69092298:T:C	rs568735101	T	C	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr15	69201191	69201192	chr15:69201192:T:G	rs56198488	T	G	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	69461315	69461316	chr15:69461316:A:G	chr15:69461316:A:G	A	G	a	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	69561822	69561823	chr15:69561823:C:T	rs75458114	C	T	C	Hoxd3_MA0912.1	0	1	+	8.964218163983057	9.016723661360988	CTGATGTAATTAAAAA
chr15	69593760	69593761	chr15:69593761:G:A	rs76059000	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	69593806	69593807	chr15:69593807:C:T	rs16953543	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr15	69627864	69627865	chr15:69627865:A:T	rs145857150	A	T	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr15	69758721	69758722	chr15:69758722:C:T	rs16953716	C	T	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr15	69885477	69885478	chr15:69885478:G:A	rs58500252	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr15	69954888	69954889	chr15:69954889:C:T	rs113373727	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr15	70264333	70264334	chr15:70264334:A:G	rs926130106	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr15	70298114	70298115	chr15:70298115:C:T	rs28376815	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr15	70336509	70336510	chr15:70336510:G:C	rs9302254	G	C	C	Hoxd3_MA0912.1	12	1	+	9.105200016008512	10.072722246947542	TTGTATTAATTAGCAC
chr15	70595022	70595023	chr15:70595023:G:A	rs7180100	G	A	g	Hoxd3_MA0912.1	1	1	-	8.04043865387559	10.124499141411722	CCGAAGTAATTACCTA
chr15	70743325	70743326	chr15:70743326:T:G	rs76086330	T	G	t	Hoxd3_MA0912.1	8	1	-	8.98519278012561	4.494515593358618	CAGATGTAATTAAGTT
chr15	70743929	70743930	chr15:70743930:T:G	rs16954789	T	G	t	Hoxd3_MA0912.1	24	0	-	0	0	.
chr15	70762381	70762382	chr15:70762382:G:C	rs549005951	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	70814179	70814180	chr15:70814180:A:G	rs28463975	A	G	G	Hoxd3_MA0912.1	13	1	-	8.28623198561956	8.890468714131934	TTGGGTTCATTATTGC
chr15	70867440	70867441	chr15:70867441:T:C	rs1534617	T	C	T	Hoxd3_MA0912.1	0	1	+	9.725673055494013	9.673167558116083	TTGGAGCAATTACTGT
chr15	71440869	71440870	chr15:71440870:C:T	rs559768952	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr15	71444571	71444572	chr15:71444572:A:G	rs8027841	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	71449439	71449440	chr15:71449440:T:C	rs4238437	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr15	71601518	71601519	chr15:71601519:G:A	rs8029041	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	71690833	71690834	chr15:71690834:T:C	rs7165201	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr15	71725318	71725319	chr15:71725319:G:T	rs142835491	G	T	-	Hoxd3_MA0912.1	15	1	-	8.46837555269994	7.581072357699037	CATATGTAATTACCTC
chr15	72197350	72197351	chr15:72197351:C:T	rs1457030	C	T	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	72341233	72341234	chr15:72341234:C:T	rs78040140	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	72671006	72671007	chr15:72671007:T:G	chr15:72671007:T:G	T	G	T	Hoxd3_MA0912.1	9	1	+	7.3530645073088365	2.862387320541844	CTGAGTTCATGGCCCT
chr15	72671031	72671032	chr15:72671032:C:T	rs1313813746	C	T	c	Hoxd3_MA0912.1	34	0	+	0	0	.
chr15	72785944	72785945	chr15:72785945:A:T	rs4777540	A	T	A	Hoxd3_MA0912.1	12	1	-	8.147919576432336	9.3546714964372	CTGTTTTAATTGTCCC
chr15	72945447	72945448	chr15:72945448:G:C	rs1080331	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	73328107	73328108	chr15:73328108:C:T	rs519946	C	T	T	Hoxd3_MA0912.1	0	1	-	8.704459157660903	10.024906952983207	GTGATGTAATTAACCA
chr15	73328118	73328119	chr15:73328119:C:T	rs519970	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr15	73358482	73358483	chr15:73358483:G:A	rs3826046	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	73391686	73391687	chr15:73391687:G:A	rs77740482	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr15	73950041	73950042	chr15:73950042:T:A	rs66473812	T	A	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	74043463	74043464	chr15:74043464:C:T	rs12438442	C	T	C	Hoxd3_MA0912.1	13	1	+	6.848893636435392	6.244656907923018	GTGAGCTCATTGCCGT
chr15	74592105	74592106	chr15:74592106:C:T	rs12898794	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	74622307	74622308	chr15:74622308:G:A	rs56298217	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr15	74785025	74785026	chr15:74785026:C:A	rs1378942	C	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	75299381	75299382	chr15:75299382:G:A	rs1394694576	G	A	-	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr15	75455934	75455935	chr15:75455935:A:G	chr15:75455935:A:G	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr15	75577438	75577439	chr15:75577439:A:T	rs980282509	A	T	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr15	75766502	75766503	chr15:75766503:C:T	rs2004630	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr15	76064959	76064960	chr15:76064960:A:G	rs146693794	A	G	a	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr15	76903144	76903145	chr15:76903145:A:G	rs17464903	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr15	77504537	77504538	chr15:77504538:C:T	rs143740453	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr15	77604354	77604355	chr15:77604355:C:G	rs148449209	C	G	C	Hoxd3_MA0912.1	13	1	+	7.5828773744397076	6.0047994637266235	TTGGGCTCATTATCAG
chr15	77766726	77766727	chr15:77766727:G:T	rs9672486	G	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	77945172	77945173	chr15:77945173:A:C	rs4886548	A	C	-	Hoxd3_MA0912.1	26	0	+	0	0	.
chr15	78044882	78044883	chr15:78044883:G:A	rs4886995	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	78051203	78051204	chr15:78051204:T:A	rs11629761	T	A	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	78057932	78057933	chr15:78057933:G:C	rs138360446	G	C	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	78136997	78136998	chr15:78136998:C:T	rs2007540	C	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr15	78272845	78272846	chr15:78272846:T:C	rs17402006	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr15	78388206	78388207	chr15:78388207:G:C	rs117469144	G	C	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	78397326	78397327	chr15:78397327:G:A	rs3825849	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr15	78449275	78449276	chr15:78449276:T:C	rs7181486	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	78541019	78541020	chr15:78541020:A:G	rs77424455	A	G	A	Hoxd3_MA0912.1	9	1	-	9.500042205281279	2.611469745715916	TTGAGGTAATTGCAAT
chr15	78926651	78926652	chr15:78926652:C:T	rs3784537	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr15	78949331	78949332	chr15:78949332:G:C	rs78921128	G	C	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	78963694	78963695	chr15:78963695:A:G	rs12443215	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr15	79051730	79051731	chr15:79051731:T:C	rs74518012	T	C	T	Hoxd3_MA0912.1	3	1	-	7.459272143837712	7.345174392798688	CTGACCTAATTGCATC
chr15	79091423	79091424	chr15:79091424:C:A	rs76115561	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr15	79099813	79099814	chr15:79099814:T:C	rs568104869	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	79190273	79190274	chr15:79190274:G:T	rs56940746	G	T	g	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	79190277	79190278	chr15:79190278:T:C	rs11072831	T	C	c	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr15	79211015	79211016	chr15:79211016:A:G	rs12908945	A	G	a	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	79257981	79257982	chr15:79257982:A:G	rs112883157	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr15	79340112	79340113	chr15:79340113:A:G	rs137950970	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	79340142	79340143	chr15:79340143:A:C	rs12913684	A	C	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr15	79349527	79349528	chr15:79349528:A:G	rs11855833	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	79349556	79349557	chr15:79349557:C:T	rs11855877	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr15	79349563	79349564	chr15:79349564:A:C	rs12593673	A	C	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr15	79549235	79549236	chr15:79549236:G:A	rs60297320	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr15	79814735	79814736	chr15:79814736:A:C	rs35259473	A	C	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	79895818	79895819	chr15:79895819:T:C	rs115322458	T	C	.	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr15	79973545	79973546	chr15:79973546:T:C	rs1987102	T	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr15	80239277	80239278	chr15:80239278:T:G	rs3960792	T	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	80315806	80315807	chr15:80315807:A:T	rs3842947	A	T	T	Hoxd3_MA0912.1	6	1	-	9.76523019273744	5.427539131643398	GTGATGTAATTACACT
chr15	80325369	80325370	chr15:80325370:C:T	rs1041624885	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr15	80340895	80340896	chr15:80340896:A:G	rs77638853	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr15	80388356	80388357	chr15:80388357:C:T	rs12900693	C	T	c	Hoxd3_MA0912.1	3	1	+	8.662193085846317	9.39887430842599	ATGCGCTAATTAAGTT
chr15	80415245	80415246	chr15:80415246:A:G	rs3848207	A	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr15	80442689	80442690	chr15:80442690:T:C	rs79128307	T	C	T	Hoxd3_MA0912.1	9	1	+	7.898761008347286	1.0101885487819233	CTGATTCAATGAACCG
chr15	80442695	80442696	chr15:80442696:G:A	rs2305145	G	A	G	Hoxd3_MA0912.1	15	1	+	7.898761008347286	7.05776238138807	CTGATTCAATGAACCG
chr15	80817120	80817121	chr15:80817121:G:A	rs16972411	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	80996355	80996356	chr15:80996356:G:A	rs115361733	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr15	81092433	81092434	chr15:81092434:G:C	rs60201408	G	C	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	81255074	81255075	chr15:81255075:T:C	rs115750154	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr15	81267633	81267634	chr15:81267634:T:C	rs7182512	T	C	C	Hoxd3_MA0912.1	10	1	+	8.269570793731518	1.4898875511010892	TAGACCTAATTAGAGT
chr15	81271562	81271563	chr15:81271563:T:C	rs11857325	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr15	81271571	81271572	chr15:81271572:G:A	rs11853837	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr15	81616939	81616940	chr15:81616940:G:A	rs78439087	G	A	G	Hoxd3_MA0912.1	5	1	+	9.039617435291035	8.31505405849771	TGGGTGTAATTAATTT
chr15	81968699	81968700	chr15:81968700:C:T	rs145001409	C	T	C	Hoxd3_MA0912.1	3	1	-	9.71528362411751	9.829381375156533	TTGGGCTAATTGTCCT
chr15	82183455	82183456	chr15:82183456:A:G	rs881308	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr15	82530964	82530965	chr15:82530965:C:T	rs1187265385	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr15	82530965	82530966	chr15:82530966:G:A	rs1254072364	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	83208686	83208687	chr15:83208687:T:C	rs186172785	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr15	83889694	83889695	chr15:83889695:A:G	rs117454364	A	G	A	Hoxd3_MA0912.1	9	1	-	7.4418207563131755	0.5532482967478137	CTGGGTTCATTGTCTT
chr15	83978229	83978230	chr15:83978230:T:C	rs881984	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	84401208	84401209	chr15:84401209:C:T	rs60454382	C	T	.	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	84401233	84401234	chr15:84401234:A:C	rs4842954	A	C	.	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr15	84870987	84870988	chr15:84870988:A:G	rs893162	A	G	A	Hoxd3_MA0912.1	13	1	+	8.215557883121747	7.241716700921037	CAGGGGTAATGACACG
chr15	85008283	85008284	chr15:85008284:A:G	rs289380	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	85347917	85347918	chr15:85347918:G:A	rs77963071	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr15	85394078	85394079	chr15:85394079:G:A	rs16977800	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	85412183	85412184	chr15:85412184:C:T	rs377063136	C	T	C	Hoxd3_MA0912.1	14	1	-	7.982018333560243	7.038053003796108	CTGTATCAATGACCGT
chr15	85579547	85579548	chr15:85579548:T:C	rs2061822	T	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr15	85628595	85628596	chr15:85628596:C:G	rs16942440	C	G	C	Hoxd3_MA0912.1	0	1	+	8.590766375243907	6.606389945360798	CATTGTTAATTAACTG
chr15	85630401	85630402	chr15:85630402:C:T	rs11635587	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	85701015	85701016	chr15:85701016:T:C	rs7171498	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr15	85762889	85762890	chr15:85762890:A:G	rs57731228	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	85860673	85860674	chr15:85860674:C:T	rs114529586	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr15	85860684	85860685	chr15:85860685:A:G	rs28374428	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr15	86619573	86619574	chr15:86619574:C:T	rs113985341	C	T	C	Hoxd3_MA0912.1	14	1	+	8.672147134841452	8.107810688709161	AAGAGGTAATTAGACG
chr15	86619584	86619585	chr15:86619585:A:C	rs16977848	A	C	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr15	86654701	86654702	chr15:86654702:G:A	rs79428239	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr15	86654703	86654704	chr15:86654704:T:C	rs9920829	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	86752459	86752460	chr15:86752460:T:C	rs1817124	T	C	C	Hoxd3_MA0912.1	1	1	+	8.848042307881082	6.763981820344954	CTGAGGTAATGAGTTT
chr15	87348441	87348442	chr15:87348442:C:G	rs72749808	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr15	87471317	87471318	chr15:87471318:T:A	rs16940431	T	A	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	87954394	87954395	chr15:87954395:C:G	rs62019205	C	G	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr15	88334299	88334300	chr15:88334300:A:G	rs76628092	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr15	88371085	88371086	chr15:88371086:C:G	rs73448907	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	88388888	88388889	chr15:88388889:A:G	rs9652510	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr15	88477450	88477451	chr15:88477451:T:C	rs16941952	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	88614368	88614369	chr15:88614369:T:G	rs12908273	T	G	T	Hoxd3_MA0912.1	10	1	+	8.47355284404174	6.499610477861221	CCTGGCTAATTACAGT
chr15	88614370	88614371	chr15:88614371:C:T	rs11856531	C	T	T	Hoxd3_MA0912.1	12	1	+	8.47355284404174	7.266800924036875	CCTGGCTAATTACAGT
chr15	88905025	88905026	chr15:88905026:G:C	rs28616621	G	C	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr15	89017896	89017897	chr15:89017897:C:T	rs8039741	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr15	89017928	89017929	chr15:89017929:G:A	rs192330120	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr15	89095208	89095209	chr15:89095209:G:A	rs293373	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	89155101	89155102	chr15:89155102:C:T	rs12902156	C	T	T	Hoxd3_MA0912.1	3	1	+	8.75752031597265	9.494201538552323	TTCCAGTAATTAACTT
chr15	89155834	89155835	chr15:89155835:C:T	rs193059398	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr15	89317576	89317577	chr15:89317577:T:G	rs2307436	T	G	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr15	89444504	89444505	chr15:89444505:A:T	rs11637415	A	T	a	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr15	89777807	89777808	chr15:89777808:A:G	rs12900413	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr15	89829874	89829875	chr15:89829875:A:G	rs11639214	A	G	a	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	89848688	89848689	chr15:89848689:A:G	rs10852122	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr15	89911789	89911790	chr15:89911790:C:T	rs180671447	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr15	89928684	89928685	chr15:89928685:G:T	rs1256854	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	90021391	90021392	chr15:90021392:A:G	rs4932271	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	90113416	90113417	chr15:90113417:C:T	rs59337025	C	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	90257826	90257827	chr15:90257827:A:T	rs55674131	A	T	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	90301379	90301380	chr15:90301380:C:T	rs8033513	C	T	C	Hoxd3_MA0912.1	12	1	+	7.3530645073088365	6.146312587303973	CTGAGTTCATGGCCCT
chr15	90320062	90320063	chr15:90320063:C:T	rs139460116	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr15	90388458	90388459	chr15:90388459:T:C	rs145816873	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr15	90505907	90505908	chr15:90505908:T:G	rs7176776	T	G	t	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr15	90810373	90810374	chr15:90810374:T:C	rs12592875	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	91028783	91028784	chr15:91028784:T:C	rs113200426	T	C	.	Hoxd3_MA0912.1	29	0	+	0	0	.
chr15	91056280	91056281	chr15:91056281:G:A	rs1609450	G	A	g	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr15	91142288	91142289	chr15:91142289:T:C	rs17594278	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr15	91142292	91142293	chr15:91142293:T:C	rs72764737	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr15	91312908	91312909	chr15:91312909:C:T	rs751108333	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr15	91536638	91536639	chr15:91536639:A:G	rs7178201	A	G	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr15	91927806	91927807	chr15:91927807:G:A	rs75814599	G	A	G	Hoxd3_MA0912.1	14	1	-	8.199132847498644	7.634796401366355	CTGTGTTAATGAGACC
chr15	92091190	92091191	chr15:92091191:A:G	rs1298705205	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr15	92105975	92105976	chr15:92105976:T:C	rs2853650	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr15	92267628	92267629	chr15:92267629:G:C	rs10152374	G	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	92541486	92541487	chr15:92541487:T:C	rs4778001	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr15	93048040	93048041	chr15:93048041:C:T	rs140498756	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	93265333	93265334	chr15:93265334:T:C	rs11634643	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr15	93265365	93265366	chr15:93265366:G:T	rs10520721	G	T	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr15	93824736	93824737	chr15:93824737:T:C	rs2066389	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr15	93826488	93826489	chr15:93826489:C:T	rs73464071	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr15	93887122	93887123	chr15:93887123:C:G	rs74610845	C	G	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr15	94041064	94041065	chr15:94041065:A:G	rs1479822	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	94047230	94047231	chr15:94047231:T:A	rs8042192	T	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr15	94078483	94078484	chr15:94078484:A:G	rs1479830	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	94124788	94124789	chr15:94124789:G:A	rs724407	G	A	A	Hoxd3_MA0912.1	3	1	+	7.4712319527860505	7.585329703825074	CCCGGATAATTACTGT
chr15	94610090	94610091	chr15:94610091:C:G	rs4353444	C	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr15	94670352	94670353	chr15:94670353:C:T	rs2619170	C	T	T	Hoxd3_MA0912.1	15	1	+	9.398157141968984	10.175861710556992	TTAAAGTAATTACTGC
chr15	94684326	94684327	chr15:94684327:C:G	rs12443421	C	G	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr15	95017164	95017165	chr15:95017165:C:G	rs77283089	C	G	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr15	95363756	95363757	chr15:95363757:C:A	rs150039871	C	A	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr15	95469525	95469526	chr15:95469526:G:A	rs59313908	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr15	95557867	95557868	chr15:95557868:C:T	rs111230478	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	95653247	95653248	chr15:95653248:T:G	rs1372640	T	G	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	95676273	95676274	chr15:95676274:A:G	rs7166920	A	G	G	Hoxd3_MA0912.1	4	1	-	11.61358578631764	10.639744604116933	TTGATCTAATTAAACT
chr15	96274203	96274204	chr15:96274204:G:A	rs150576216	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr15	96274237	96274238	chr15:96274238:C:A	rs7182413	C	A	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	96279807	96279808	chr15:96279808:A:T	rs72751246	A	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	96422596	96422597	chr15:96422597:T:C	rs56938914	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr15	96488837	96488838	chr15:96488838:C:T	rs8032562	C	T	C	Hoxd3_MA0912.1	4	1	-	8.783608073342542	8.17937134483017	ATGAGGTAATTGCTAT
chr15	96494011	96494012	chr15:96494012:T:C	rs12593432	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr15	96502487	96502488	chr15:96502488:C:G	rs11073494	C	G	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr15	97005920	97005921	chr15:97005921:C:T	rs4965065	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr15	97073104	97073105	chr15:97073105:A:G	rs67293892	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	97073135	97073136	chr15:97073136:G:A	rs67427459	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr15	97235402	97235403	chr15:97235403:C:T	rs928768853	C	T	C	Hoxd3_MA0912.1	14	1	+	9.062737886418308	8.498401440286017	TGGTTTTAATTACCCG
chr15	97652469	97652470	chr15:97652470:A:C	rs7173224	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr15	97692898	97692899	chr15:97692899:G:A	rs61997181	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr15	97692952	97692953	chr15:97692953:T:C	rs61997178	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr15	97821520	97821521	chr15:97821521:C:T	rs8024493	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr15	97884635	97884636	chr15:97884636:G:C	rs11073586	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr15	97884647	97884648	chr15:97884648:C:T	rs8041751	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	97889798	97889799	chr15:97889799:A:G	rs1123082	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr15	97902936	97902937	chr15:97902937:C:T	rs9920622	C	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr15	98316182	98316183	chr15:98316183:A:T	rs6598418	A	T	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr15	98316194	98316195	chr15:98316195:C:T	rs7169044	C	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr15	98519452	98519453	chr15:98519453:A:T	rs10431866	A	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr15	98622204	98622205	chr15:98622205:T:C	rs8031285	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr15	98725917	98725918	chr15:98725918:G:A	rs4965431	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	98738812	98738813	chr15:98738813:C:T	rs73475619	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr15	98779863	98779864	chr15:98779864:A:G	rs1434544836	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr15	98812250	98812251	chr15:98812251:G:C	rs55997155	G	C	C	Hoxd3_MA0912.1	4	1	+	7.722345643062838	6.144267732349756	CTGAGTCAATGACTGG
chr15	99056153	99056154	chr15:99056154:C:T	rs2654963	C	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr15	99135061	99135062	chr15:99135062:C:T	rs13853	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	99372845	99372846	chr15:99372846:T:A	rs6598239	T	A	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr15	99460657	99460658	chr15:99460658:C:A	rs4965504	C	A	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	99460679	99460680	chr15:99460680:C:T	rs10162953	C	T	C	Hoxd3_MA0912.1	5	1	-	7.968046336978027	7.243482960184702	TTGGGGCAATGAATTT
chr15	99475318	99475319	chr15:99475319:A:G	rs115617743	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr15	99658280	99658281	chr15:99658281:G:A	rs762110754	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr15	99809068	99809069	chr15:99809069:A:G	rs4965540	A	G	a	Hoxd3_MA0912.1	11	1	+	9.098442871840128	7.312516923659135	TAGCTGTAATTACTGT
chr15	99820471	99820472	chr15:99820472:G:T	rs56160817	G	T	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr15	99896420	99896421	chr15:99896421:C:T	rs4467053	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr15	99917116	99917117	chr15:99917117:C:T	rs35630418	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr15	99963808	99963809	chr15:99963809:A:C	rs56103220	A	C	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr15	99967812	99967813	chr15:99967813:T:A	rs149763868	T	A	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr15	99967816	99967817	chr15:99967817:T:C	rs145874960	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	100060072	100060073	chr15:100060073:T:A	rs12901866	T	A	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr15	100092684	100092685	chr15:100092685:G:A	rs577704614	G	A	G	Hoxd3_MA0912.1	14	1	+	9.338689505475555	8.394724175711422	TAGAGGTAATTACTGA
chr15	100099416	100099417	chr15:100099417:G:T	rs7180604	G	T	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	100202580	100202581	chr15:100202581:G:A	rs8035836	G	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr15	100721720	100721721	chr15:100721721:C:T	rs1867039	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr15	100721756	100721757	chr15:100721757:G:A	rs76140144	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr15	100833961	100833962	chr15:100833962:C:T	rs11630278	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr15	100869721	100869722	chr15:100869722:G:C	rs142124983	G	C	G	Hoxd3_MA0912.1	3	1	+	8.643052591330234	7.456132673657293	CTGGGTTAATGACGCC
chr15	100869738	100869739	chr15:100869739:G:A	rs146555442	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr15	101003677	101003678	chr15:101003678:C:T	rs28582420	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr15	101003700	101003701	chr15:101003701:G:A	rs28465587	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr15	101121572	101121573	chr15:101121573:G:T	rs60398588	G	T	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr15	101127020	101127021	chr15:101127021:T:C	rs4965789	T	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr15	101350605	101350606	chr15:101350606:G:T	rs10152458	G	T	g	Hoxd3_MA0912.1	1	1	-	7.060852135647355	7.918676409021547	CCGGTCTAATTGCCAT
chr15	101369241	101369242	chr15:101369242:A:G	rs2955968	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr15	101370968	101370969	chr15:101370969:G:A	rs4965380	G	A	g	Hoxd3_MA0912.1	30	0	+	0	0	.
chr15	101373011	101373012	chr15:101373012:G:A	rs192707837	G	A	G	Hoxd3_MA0912.1	0	1	-	8.779796273144745	8.832301770522676	CACTTGTAATTACCCT
chr15	101374710	101374711	chr15:101374711:A:G	rs28669804	A	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr15	101382849	101382850	chr15:101382850:G:T	rs11858775	G	T	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr15	101428615	101428616	chr15:101428616:A:G	rs55792173	A	G	A	Hoxd3_MA0912.1	1	1	-	7.760451470479216	5.676390982943087	ATGGGGTCATTACTGA
chr16	310659	310660	chr16:310660:G:T	rs3848360	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr16	379104	379105	chr16:379105:C:G	rs193146955	C	G	C	Hoxd3_MA0912.1	4	1	-	8.43711195942996	6.859034048716877	TGTCGTTAATTAACCT
chr16	379128	379129	chr16:379129:C:T	rs11648403	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	528946	528947	chr16:528947:G:A	rs113867353	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	608325	608326	chr16:608326:C:T	rs141130105	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	929638	929639	chr16:929639:T:C	rs73499252	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr16	939563	939564	chr16:939564:C:T	rs112146294	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr16	1037614	1037615	chr16:1037615:T:G	rs118012096	T	G	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr16	1070697	1070698	chr16:1070698:C:T	rs669672	C	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr16	1193662	1193663	chr16:1193663:C:T	rs145534062	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	1193691	1193692	chr16:1193692:C:T	rs7191370	C	T	C	Hoxd3_MA0912.1	0	1	-	9.06844925253785	10.388897047860153	GTGCGGTAATTACACT
chr16	1330759	1330760	chr16:1330760:T:G	rs1883561	T	G	t	Hoxd3_MA0912.1	9	1	+	7.113394971247654	2.6227177844806606	CTGTGCTCATGAGCGT
chr16	1749405	1749406	chr16:1749406:A:G	rs4786518	A	G	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr16	1849869	1849870	chr16:1849870:A:T	rs74497451	A	T	-	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr16	1981586	1981587	chr16:1981587:C:G	rs956154936	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	2214844	2214845	chr16:2214845:C:A	rs915307325	C	A	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr16	2214851	2214852	chr16:2214852:G:C	rs25850	G	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr16	2666538	2666539	chr16:2666539:T:C	rs4395075	T	C	t	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr16	2825915	2825916	chr16:2825916:C:T	rs74515906	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	2868135	2868136	chr16:2868136:C:G	rs185026825	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr16	2889943	2889944	chr16:2889944:G:A	rs79424176	G	A	G	Hoxd3_MA0912.1	0	1	-	7.87103765254925	7.9235431499271805	CCTGGCTAATTATCGT
chr16	2905820	2905821	chr16:2905821:A:G	rs1266796624	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr16	2905858	2905859	chr16:2905859:C:A	rs553651611	C	A	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr16	2905861	2905862	chr16:2905862:G:A	rs116253446	G	A	g	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	2905870	2905871	chr16:2905871:G:A	rs1045732628	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr16	3031560	3031561	chr16:3031561:A:C	rs73483555	A	C	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr16	3031603	3031604	chr16:3031604:C:T	rs557310858	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	3075591	3075592	chr16:3075592:C:T	rs185329421	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr16	3152595	3152596	chr16:3152596:G:A	rs530724698	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr16	3160353	3160354	chr16:3160354:C:G	rs373447889	C	G	C	Hoxd3_MA0912.1	14	1	+	6.30548421522162	6.129068849937173	CTGGGCTCATGAAGCG
chr16	3450962	3450963	chr16:3450963:A:T	rs3848359	A	T	A	Hoxd3_MA0912.1	14	1	-	8.586789542445704	8.030745293529414	ATGTTCTAATTGACTT
chr16	4123816	4123817	chr16:4123817:T:A	rs34609194	T	A	t	Hoxd3_MA0912.1	13	1	+	9.184279482637086	9.184279482637086	TTGGATTAATTAGTCA
chr16	4200890	4200891	chr16:4200891:A:C	rs879150	A	C	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr16	4200913	4200914	chr16:4200914:C:A	rs879151	C	A	A	Hoxd3_MA0912.1	11	1	-	8.191012651885469	5.639247538972423	CTGTGTTAATTGGGCT
chr16	4479611	4479612	chr16:4479612:A:G	rs6500610	A	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr16	4529250	4529251	chr16:4529251:C:T	rs7188489	C	T	C	Hoxd3_MA0912.1	4	1	-	7.831188108937004	7.22695138042463	GTGAGGTCATTACATT
chr16	4610245	4610246	chr16:4610246:G:A	rs863500	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr16	4610286	4610287	chr16:4610287:C:T	rs184738529	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	4613645	4613646	chr16:4613646:C:T	rs147360309	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr16	4624147	4624148	chr16:4624148:G:T	rs3848374	G	T	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr16	4893017	4893018	chr16:4893018:T:G	rs12921187	T	G	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr16	4893031	4893032	chr16:4893032:G:T	rs75804753	G	T	G	Hoxd3_MA0912.1	12	1	-	7.736842301520141	7.736842301520141	CTGCTGTCATTACCTC
chr16	5759180	5759181	chr16:5759181:T:A	rs1347586	T	A	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	5850275	5850276	chr16:5850276:T:C	rs4786784	T	C	T	Hoxd3_MA0912.1	13	1	+	7.6936197725478355	8.297856501060208	CTGGAGTAATGAGTGG
chr16	6018865	6018866	chr16:6018866:C:T	rs190401818	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr16	6044555	6044556	chr16:6044556:C:A	rs12926282	C	A	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	6067837	6067838	chr16:6067838:G:A	rs4146813	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr16	6169158	6169159	chr16:6169159:G:T	rs75984305	G	T	G	Hoxd3_MA0912.1	12	1	+	7.388445186886841	7.149215497821006	TTGGGGTCATTGGAGT
chr16	6318683	6318684	chr16:6318684:G:C	rs9972879	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr16	6391875	6391876	chr16:6391876:G:C	rs542941299	G	C	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr16	6546960	6546961	chr16:6546961:C:T	rs6500794	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr16	6629784	6629785	chr16:6629785:C:T	rs970865124	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr16	6633676	6633677	chr16:6633677:T:G	rs72762959	T	G	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	6682182	6682183	chr16:6682183:G:C	rs78034254	G	C	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	6848823	6848824	chr16:6848824:G:A	rs9936001	G	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	6968794	6968795	chr16:6968795:C:T	rs35665891	C	T	C	Hoxd3_MA0912.1	2	1	-	9.04111810378641	7.5912830596293706	CTGAGCTAATGAAGGT
chr16	7028227	7028228	chr16:7028228:T:C	rs8046607	T	C	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr16	7487993	7487994	chr16:7487994:G:T	rs192624751	G	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr16	7534998	7534999	chr16:7534999:T:G	rs10459845	T	G	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	7561970	7561971	chr16:7561971:G:C	rs12932136	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr16	7569362	7569363	chr16:7569363:T:C	rs7202746	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr16	7658511	7658512	chr16:7658512:C:A	rs77191135	C	A	C	Hoxd3_MA0912.1	2	1	+	7.9440989854127295	8.277738358949637	ATCAGGTAATTGCTGT
chr16	8236281	8236282	chr16:8236282:C:G	rs1599548	C	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr16	8313543	8313544	chr16:8313544:T:C	rs138439477	T	C	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr16	8326200	8326201	chr16:8326201:C:T	rs9921983	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	8382045	8382046	chr16:8382046:C:T	rs78628086	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr16	8461739	8461740	chr16:8461740:A:T	rs4787222	A	T	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr16	8461781	8461782	chr16:8461782:A:G	rs4238896	A	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr16	8477533	8477534	chr16:8477534:T:G	chr16:8477534:T:G	T	G	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	8721393	8721394	chr16:8721394:C:T	rs60732583	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr16	8721400	8721401	chr16:8721401:C:G	rs59354735	C	G	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	8906145	8906146	chr16:8906146:G:A	rs4985012	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr16	8957089	8957090	chr16:8957090:T:C	rs76161145	T	C	T	Hoxd3_MA0912.1	10	1	+	8.072339355426038	1.2926561127956095	ACGTACTAATTACTGT
chr16	9054824	9054825	chr16:9054825:C:A	rs61198491	C	A	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr16	9099865	9099866	chr16:9099866:T:G	rs34932929	T	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr16	9195380	9195381	chr16:9195381:C:T	rs907025	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr16	9307610	9307611	chr16:9307611:A:G	rs649127	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr16	9332103	9332104	chr16:9332104:C:T	rs249284	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	9424635	9424636	chr16:9424636:T:C	rs837353	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr16	9545620	9545621	chr16:9545621:C:T	rs12446581	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr16	9940418	9940419	chr16:9940419:T:G	rs11074504	T	G	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr16	9946643	9946644	chr16:9946644:T:C	rs74341156	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	10121955	10121956	chr16:10121956:G:T	rs1868289	G	T	G	Hoxd3_MA0912.1	2	1	+	9.6626732082913	8.345482638740556	ATGGTCTAATTAAAAT
chr16	10188509	10188510	chr16:10188510:G:A	rs1097867	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr16	10237502	10237503	chr16:10237503:T:A	rs17672079	T	A	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr16	10489412	10489413	chr16:10489413:T:A	rs11645237	T	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	10500738	10500739	chr16:10500739:A:T	rs12598499	A	T	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr16	10500782	10500783	chr16:10500783:C:G	rs11074879	C	G	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr16	10527232	10527233	chr16:10527233:C:T	rs9972773	C	T	C	Hoxd3_MA0912.1	15	1	+	8.58073497708481	9.358439545672818	CTGAGTTCATTAAGGC
chr16	10601524	10601525	chr16:10601525:C:T	rs114565942	C	T	C	Hoxd3_MA0912.1	1	1	+	7.577506017864875	9.661566505401007	CCGGAGTCATTAAACT
chr16	11046890	11046891	chr16:11046891:G:C	rs9931964	G	C	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr16	11135558	11135559	chr16:11135559:T:C	rs193075636	T	C	T	Hoxd3_MA0912.1	1	1	+	8.693201250082483	6.609140762546353	TTGGGGTCATTACCTA
chr16	11295351	11295352	chr16:11295352:A:T	rs143781526	A	T	A	Hoxd3_MA0912.1	7	1	+	7.816493868104202	1.0368106254737741	CTGTCTTAATTGCCTC
chr16	11295369	11295370	chr16:11295370:G:C	rs148138217	G	C	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	11308588	11308589	chr16:11308589:G:A	rs539209199	G	A	G	Hoxd3_MA0912.1	13	1	-	5.9212208124692625	5.316984083956888	CTGGGCCCATGAACGG
chr16	11394068	11394069	chr16:11394069:G:T	rs12599081	G	T	T	Hoxd3_MA0912.1	14	1	+	8.948538186421647	8.560617105573805	CTGATTTAATTGGTGT
chr16	11538851	11538852	chr16:11538852:T:C	rs34484629	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr16	11560652	11560653	chr16:11560653:T:C	rs55747517	T	C	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr16	11636221	11636222	chr16:11636222:C:G	rs59275698	C	G	c	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr16	11667831	11667832	chr16:11667832:T:C	rs8191263	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	11701038	11701039	chr16:11701039:C:T	rs17606153	C	T	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr16	11907589	11907590	chr16:11907590:G:C	rs7184515	G	C	G	Hoxd3_MA0912.1	12	1	+	9.532449156719233	10.499971387658263	TTGTAGTAATTAGCTC
chr16	11907711	11907712	chr16:11907712:C:T	rs62038798	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	12215824	12215825	chr16:12215825:C:T	rs830726	C	T	C	Hoxd3_MA0912.1	3	1	-	7.351715829636372	7.465813580675394	TTGGCTTAATTGGCTC
chr16	12257396	12257397	chr16:12257397:G:A	rs9936260	G	A	g	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	12344992	12344993	chr16:12344993:G:T	rs16959263	G	T	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	12416481	12416482	chr16:12416482:A:C	rs57913527	A	C	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr16	12432240	12432241	chr16:12432241:G:A	rs4781239	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	12457337	12457338	chr16:12457338:C:T	rs577210096	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	12458796	12458797	chr16:12458797:C:G	rs79831092	C	G	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr16	12470712	12470713	chr16:12470713:A:C	rs62028445	A	C	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr16	12618764	12618765	chr16:12618765:G:A	rs55719400	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr16	12618797	12618798	chr16:12618798:G:A	rs75686592	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr16	12777781	12777782	chr16:12777782:T:C	rs4536458	T	C	C	Hoxd3_MA0912.1	8	1	-	7.74847440913161	0.8599019495662465	AAGTGCCAATTACAGT
chr16	12906415	12906416	chr16:12906416:A:C	rs751349658	A	C	A	Hoxd3_MA0912.1	7	1	+	9.155735919400867	7.181793553220348	CTGGGCTAATTAGGGC
chr16	13213641	13213642	chr16:13213642:T:G	chr16:13213642:T:G	T	G	T	Hoxd3_MA0912.1	13	1	+	8.692044948066348	7.71820376586564	CAAGGTTAATTAATGG
chr16	13781505	13781506	chr16:13781506:T:C	rs16962879	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	13866199	13866200	chr16:13866200:G:A	rs12934929	G	A	G	Hoxd3_MA0912.1	2	1	+	9.74409385716342	8.294258813006381	CTGGGATAATTATTTT
chr16	13883908	13883909	chr16:13883909:C:G	rs8049074	C	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	13893861	13893862	chr16:13893862:T:C	rs6498482	T	C	C	Hoxd3_MA0912.1	5	1	+	8.420793167170363	8.103471725283955	CTGAATTAATGAGCAT
chr16	14097397	14097398	chr16:14097398:G:T	rs72783461	G	T	G	Hoxd3_MA0912.1	2	1	+	9.998934244706401	8.681743675155657	CAGTAGTAATTAACTT
chr16	14286746	14286747	chr16:14286747:G:A	rs113553757	G	A	G	Hoxd3_MA0912.1	7	1	-	7.144037200348332	2.3382963238984225	TTGGGGTCATTGCATG
chr16	14321694	14321695	chr16:14321695:A:G	rs909655389	A	G	A	Hoxd3_MA0912.1	1	1	-	8.820712589874441	6.7366521023383115	ATGGACCAATTACTGT
chr16	14978575	14978576	chr16:14978576:C:T	rs4985128	C	T	.	Hoxd3_MA0912.1	28	0	+	0	0	.
chr16	15072374	15072375	chr16:15072375:A:G	rs11075255	A	G	.	Hoxd3_MA0912.1	6	1	-	10.791708111283482	9.00578216310249	ATGGGGTAATTAACTG
chr16	15163283	15163284	chr16:15163284:C:G	rs150840495	C	G	.	Hoxd3_MA0912.1	0	1	+	9.893945242233247	7.909568812350138	CTGATTTAATTATTCC
chr16	15309412	15309413	chr16:15309413:G:A	rs3930972	G	A	.	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	15770768	15770769	chr16:15770769:C:T	rs115051892	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	15770784	15770785	chr16:15770785:A:G	rs16967475	A	G	A	Hoxd3_MA0912.1	11	1	+	7.496533930815042	5.710607982634048	CAGAGTCAATGACACT
chr16	16001768	16001769	chr16:16001769:A:C	rs16967173	A	C	A	Hoxd3_MA0912.1	4	1	+	8.019204526936528	7.04536334473582	GTGAAGTAATTGCCTT
chr16	16001779	16001780	chr16:16001780:T:G	rs4781708	T	G	T	Hoxd3_MA0912.1	15	1	+	8.019204526936528	7.195195390306834	GTGAAGTAATTGCCTT
chr16	16150805	16150806	chr16:16150806:C:T	rs58530708	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr16	16780554	16780555	chr16:16780555:G:A	rs7194246	G	A	G	Hoxd3_MA0912.1	14	1	-	6.905605831293083	6.341269385160793	GTGGGCTAATGAGCCG
chr16	17083463	17083464	chr16:17083464:A:G	rs1391351	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr16	17237538	17237539	chr16:17237539:A:G	rs113025605	A	G	A	Hoxd3_MA0912.1	11	1	+	8.739895990764662	6.953970042583668	CACATGTAATTAAACT
chr16	17238707	17238708	chr16:17238708:G:A	rs79385228	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr16	17247550	17247551	chr16:17247551:G:A	rs919437579	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr16	17392955	17392956	chr16:17392956:G:A	rs34770254	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr16	17508496	17508497	chr16:17508497:G:A	rs8048840	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr16	17508526	17508527	chr16:17508527:C:T	rs57724628	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	17508527	17508528	chr16:17508528:G:A	rs74881950	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr16	17565012	17565013	chr16:17565013:G:A	rs58677017	G	A	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr16	17602832	17602833	chr16:17602833:C:T	rs11649468	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	17837882	17837883	chr16:17837883:T:C	rs7196846	T	C	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	17969299	17969300	chr16:17969300:T:G	rs367898840	T	G	T	Hoxd3_MA0912.1	11	1	-	8.050767107976124	1.306130938563795	CGCTTTTAATTACCCT
chr16	18832092	18832093	chr16:18832093:G:T	rs11644096	G	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	19140896	19140897	chr16:19140897:G:A	rs4782211	G	A	G	Hoxd3_MA0912.1	2	1	+	10.287263137125729	8.83742809296869	AAGAGGTAATTAATGT
chr16	19154086	19154087	chr16:19154087:C:T	chr16:19154087:C:T	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	19291766	19291767	chr16:19291767:T:G	rs550508256	T	G	T	Hoxd3_MA0912.1	12	1	+	7.698210546222839	7.937440235288673	TGGAGTTAATGATCGT
chr16	19354588	19354589	chr16:19354589:G:T	rs7185117	G	T	T	Hoxd3_MA0912.1	2	1	+	8.854139823938565	7.536949254387823	TTGGGATAATTGGCTT
chr16	19417854	19417855	chr16:19417855:A:G	rs7206505	A	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	19524946	19524947	chr16:19524947:G:A	rs190212619	G	A	g	Hoxd3_MA0912.1	26	0	+	0	0	.
chr16	19811652	19811653	chr16:19811653:A:G	rs141824043	A	G	A	Hoxd3_MA0912.1	9	1	-	8.42001120197401	1.5314387424086457	CTCAGGTCATTAATGT
chr16	20051556	20051557	chr16:20051557:G:A	rs12924533	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr16	20181452	20181453	chr16:20181453:T:C	rs11649301	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr16	20323356	20323357	chr16:20323357:C:T	rs4411505	C	T	T	Hoxd3_MA0912.1	0	1	+	8.069037977232961	8.12154347461089	CTGGGGTAATTAGGTA
chr16	20360184	20360185	chr16:20360185:T:C	rs59578859	T	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	20638722	20638723	chr16:20638723:G:A	rs1551568	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	20648128	20648129	chr16:20648129:G:A	rs542457092	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	21076173	21076174	chr16:21076174:G:A	rs2639781	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr16	21076701	21076702	chr16:21076702:A:C	rs9926773	A	C	A	Hoxd3_MA0912.1	10	1	-	9.697723765779903	7.723781399599385	AAGGATTAATTAATGT
chr16	21076709	21076710	chr16:21076710:C:T	rs7186298	C	T	T	Hoxd3_MA0912.1	2	1	-	9.697723765779903	8.247888721622866	AAGGATTAATTAATGT
chr16	21557048	21557049	chr16:21557049:T:G	chr16:21557049:T:G	T	G	t	Hoxd3_MA0912.1	9	1	+	9.332390706332472	4.841713519565481	ATGTTCTAATTACTGG
chr16	21589879	21589880	chr16:21589880:G:A	rs74403937	G	A	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	21600692	21600693	chr16:21600693:T:G	rs181814718	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	21723616	21723617	chr16:21723617:A:G	rs4783412	A	G	a	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr16	22195040	22195041	chr16:22195041:C:T	rs139487360	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	22318716	22318717	chr16:22318717:T:C	rs2926362	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr16	22925888	22925889	chr16:22925889:T:C	rs2519965	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	22942691	22942692	chr16:22942692:C:T	rs117113089	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	23015830	23015831	chr16:23015831:T:C	rs17728040	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	23035243	23035244	chr16:23035244:C:T	rs2188334	C	T	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr16	23064850	23064851	chr16:23064851:A:G	rs3169494	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	23074701	23074702	chr16:23074702:T:C	rs4967965	T	C	T	Hoxd3_MA0912.1	6	1	+	7.203620445170161	5.417694496989167	ATGAGCTCATGAACGC
chr16	23132208	23132209	chr16:23132209:A:C	chr16:23132209:A:C	A	C	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr16	23132239	23132240	chr16:23132240:A:C	rs573017561	A	C	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	23423661	23423662	chr16:23423662:C:T	rs921693135	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	23597275	23597276	chr16:23597276:G:T	rs78210880	G	T	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr16	23742272	23742273	chr16:23742273:G:T	rs12447763	G	T	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr16	23785916	23785917	chr16:23785917:C:T	rs17808093	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr16	24070023	24070024	chr16:24070024:T:C	rs73544689	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr16	24114416	24114417	chr16:24114417:T:C	rs28603301	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr16	24114427	24114428	chr16:24114428:G:T	rs6497725	G	T	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr16	24151789	24151790	chr16:24151790:A:G	rs977022169	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	24878095	24878096	chr16:24878096:A:C	rs80251808	A	C	a	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	24991513	24991514	chr16:24991514:C:T	rs28497324	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr16	25298377	25298378	chr16:25298378:G:A	rs9938605	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr16	25340621	25340622	chr16:25340622:A:G	rs11865593	A	G	A	Hoxd3_MA0912.1	3	1	+	8.690742861876394	8.57664511083737	ATGATTCAATTACCTC
chr16	25432858	25432859	chr16:25432859:C:G	rs34376676	C	G	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr16	25445225	25445226	chr16:25445226:T:C	rs1034599	T	C	T	Hoxd3_MA0912.1	0	1	+	9.580644833890766	9.528139336512835	TTGATTTAATTGCATT
chr16	25767907	25767908	chr16:25767908:T:C	rs3935368	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	25889812	25889813	chr16:25889813:A:G	rs4787342	A	G	A	Hoxd3_MA0912.1	5	1	-	8.690742861876394	8.373421419989986	ATGATTCAATTACCTC
chr16	25889822	25889823	chr16:25889823:G:A	rs142264146	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	25937886	25937887	chr16:25937887:C:T	rs55878075	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr16	26026966	26026967	chr16:26026967:A:G	rs72778358	A	G	g	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr16	26525046	26525047	chr16:26525047:C:T	rs76620256	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	26567412	26567413	chr16:26567413:A:G	rs2520124	A	G	G	Hoxd3_MA0912.1	1	1	+	8.434820375557756	7.576996102183564	CAGGTCCAATTAAACT
chr16	26638862	26638863	chr16:26638863:T:A	rs237150	T	A	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	26817012	26817013	chr16:26817013:G:T	rs76317763	G	T	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	27021458	27021459	chr16:27021459:G:A	rs113430910	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	27359132	27359133	chr16:27359133:A:G	rs3024658	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	27381927	27381928	chr16:27381928:G:A	rs58907306	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr16	27547237	27547238	chr16:27547238:G:C	rs4787967	G	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr16	27707211	27707212	chr16:27707212:A:G	rs571017305	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	27776894	27776895	chr16:27776895:A:T	rs116933846	A	T	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr16	27858377	27858378	chr16:27858378:T:C	chr16:27858378:T:C	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr16	28610357	28610358	chr16:28610358:C:T	rs13331487	C	T	.	Hoxd3_MA0912.1	16	0	-	0	0	.
chr16	28610391	28610392	chr16:28610392:T:C	rs13331376	T	C	.	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr16	28802414	28802415	chr16:28802415:A:G	rs1428881039	A	G	.	Hoxd3_MA0912.1	9	1	-	7.337231018179094	0.448658558613731	CTGGGCTCATTGAAGC
chr16	29142575	29142576	chr16:29142576:G:A	rs11644442	G	A	.	Hoxd3_MA0912.1	22	0	-	0	0	.
chr16	29142623	29142624	chr16:29142624:T:C	rs1641911	T	C	.	Hoxd3_MA0912.1	19	0	-	0	0	.
chr16	29145912	29145913	chr16:29145913:C:A	rs4843799	C	A	.	Hoxd3_MA0912.1	26	0	+	0	0	.
chr16	29221551	29221552	chr16:29221552:G:A	rs74732601	G	A	.	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	29332533	29332534	chr16:29332534:T:C	rs62035578	T	C	.	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	29727101	29727102	chr16:29727102:T:C	rs62054877	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr16	29736841	29736842	chr16:29736842:A:G	chr16:29736842:A:G	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr16	29899746	29899747	chr16:29899747:G:T	rs77905673	G	T	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	30786419	30786420	chr16:30786420:G:C	rs371548207	G	C	G	Hoxd3_MA0912.1	14	1	+	7.504008991482064	7.680424356766511	AAGGGTTAATGACAGG
chr16	31072002	31072003	chr16:31072003:G:A	rs6565217	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr16	31192207	31192208	chr16:31192208:G:C	rs4889537	G	C	G	Hoxd3_MA0912.1	2	1	+	8.130336567613133	6.346862149919186	TTGAGGTCATTGACAT
chr16	31248231	31248232	chr16:31248232:G:A	rs4561481	G	A	A	Hoxd3_MA0912.1	0	1	-	10.123356213179061	10.175861710556992	CTAAAGTAATTAAAGT
chr16	34160145	34160146	chr16:34160146:C:T	chr16:34160146:C:T	C	T	.	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	47980534	47980535	chr16:47980535:C:T	rs62057537	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	48481424	48481425	chr16:48481425:A:T	rs9926683	A	T	a	Hoxd3_MA0912.1	6	1	-	8.052781365864377	3.715090304770334	CAGAGATAATTGCTTT
chr16	48497259	48497260	chr16:48497260:G:T	rs2062553	G	T	.	Hoxd3_MA0912.1	15	1	+	7.348751314232726	8.172760450862421	TTGAGTTCATTGTCCG
chr16	48589627	48589628	chr16:48589628:C:T	rs9931737	C	T	T	Hoxd3_MA0912.1	13	1	+	8.666974717776224	8.06273798926385	CTTAGCTAATTAACAA
chr16	48592114	48592115	chr16:48592115:C:T	rs77702353	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr16	48598334	48598335	chr16:48598335:A:G	rs377252329	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	48841361	48841362	chr16:48841362:G:A	rs1362585	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr16	48918943	48918944	chr16:48918944:C:T	rs144383975	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr16	48950331	48950332	chr16:48950332:T:C	rs7186607	T	C	C	Hoxd3_MA0912.1	11	1	-	9.776770959330324	7.990845011149332	ATGAACTAATTACTAT
chr16	49049317	49049318	chr16:49049318:G:A	rs12927723	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr16	49181966	49181967	chr16:49181967:C:A	chr16:49181967:C:A	C	A	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	49268914	49268915	chr16:49268915:T:C	rs1567522	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr16	49585064	49585065	chr16:49585065:T:C	rs7196850	T	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr16	49647371	49647372	chr16:49647372:A:C	rs60857779	A	C	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr16	49673097	49673098	chr16:49673098:C:G	rs984002131	C	G	C	Hoxd3_MA0912.1	1	1	-	8.103410895234978	8.103410895234978	AGGGAGTAATTACCTG
chr16	49731036	49731037	chr16:49731037:C:T	rs2292155	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	49745627	49745628	chr16:49745628:G:A	rs4785339	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr16	49745631	49745632	chr16:49745632:G:T	rs112086670	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	49755294	49755295	chr16:49755295:C:G	rs185621624	C	G	C	Hoxd3_MA0912.1	3	1	-	7.373937524064019	6.187017606391078	CTCGGTTAATGACCGA
chr16	49961715	49961716	chr16:49961716:C:T	rs4386136	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	50147207	50147208	chr16:50147208:T:C	rs1043720637	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	50376774	50376775	chr16:50376775:G:A	rs185984377	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	50376805	50376806	chr16:50376806:A:G	rs113408674	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr16	50440368	50440369	chr16:50440369:C:T	rs187493537	C	T	C	Hoxd3_MA0912.1	5	1	-	7.772708589639198	7.048145212845874	TTGGAGTCATTAGGCT
chr16	50589579	50589580	chr16:50589580:C:T	rs145990935	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr16	50939211	50939212	chr16:50939212:G:A	rs17227589	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	51072667	51072668	chr16:51072668:G:A	rs4785499	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	51093840	51093841	chr16:51093841:G:T	rs7202237	G	T	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr16	51093976	51093977	chr16:51093977:A:G	rs7204514	A	G	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr16	51129235	51129236	chr16:51129236:G:A	rs11649006	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	51157643	51157644	chr16:51157644:C:T	rs73585441	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr16	51420211	51420212	chr16:51420212:C:T	rs4784274	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	51597293	51597294	chr16:51597294:G:C	rs1498765	G	C	g	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	51637574	51637575	chr16:51637575:C:T	rs41312256	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	51734163	51734164	chr16:51734164:C:A	rs1564003	C	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	51820488	51820489	chr16:51820489:A:T	rs117832762	A	T	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	52067451	52067452	chr16:52067452:C:T	rs1592488	C	T	C	Hoxd3_MA0912.1	12	1	-	10.13317493129908	11.100697162238111	CTGAATTAATTAGACC
chr16	52266151	52266152	chr16:52266152:T:C	rs1362377	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr16	52494131	52494132	chr16:52494132:G:A	rs9923960	G	A	G	Hoxd3_MA0912.1	3	1	+	8.830295856118868	8.944393607157892	CTAGGCTAATTATTTT
chr16	52612463	52612464	chr16:52612464:G:A	rs3104800	G	A	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr16	52656889	52656890	chr16:52656890:A:G	rs4421971	A	G	A	Hoxd3_MA0912.1	8	1	+	8.40790023357762	1.519327774012256	CTCATCTCATTACCCT
chr16	52826238	52826239	chr16:52826239:C:T	rs56118122	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	53090209	53090210	chr16:53090210:A:G	chr16:53090210:A:G	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr16	53342938	53342939	chr16:53342939:T:A	rs3095570	T	A	-	Hoxd3_MA0912.1	0	1	+	7.52129440271681	6.804860270778075	TCTGGGTCATTACCCT
chr16	53465686	53465687	chr16:53465687:A:G	rs1072910	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr16	53465698	53465699	chr16:53465699:A:C	rs73608320	A	C	A	Hoxd3_MA0912.1	0	1	+	9.01907359654612	9.683002231106926	ATGTTATAATTACACC
chr16	53602020	53602021	chr16:53602021:A:T	rs4784319	A	T	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr16	53626267	53626268	chr16:53626268:A:G	rs79043263	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr16	53714922	53714923	chr16:53714923:G:A	rs912831401	G	A	G	Hoxd3_MA0912.1	7	1	-	8.546354779692534	3.740613903242625	CTGAGTCCATTACTGT
chr16	53773851	53773852	chr16:53773852:A:G	rs17817288	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr16	53785256	53785257	chr16:53785257:T:C	rs9936385	T	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr16	53785285	53785286	chr16:53785286:G:C	rs9923233	G	C	C	Hoxd3_MA0912.1	6	1	-	8.262898890090215	3.30418866885888	TTGTTCCAATTACTGG
chr16	54578870	54578871	chr16:54578871:A:G	rs1209807	A	G	g	Hoxd3_MA0912.1	3	1	-	8.483100608915798	7.746419386336125	CTGTGCTCATTAGTGT
chr16	54648774	54648775	chr16:54648775:A:G	rs528399781	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	54719289	54719290	chr16:54719290:C:A	rs61688043	C	A	C	Hoxd3_MA0912.1	3	1	-	7.199918853206002	6.749680158112735	TTGGGCCAATGAGAGT
chr16	54724083	54724084	chr16:54724084:C:T	rs17207448	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr16	54817965	54817966	chr16:54817966:C:G	rs6499721	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr16	54926206	54926207	chr16:54926207:A:G	rs114844221	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	54986928	54986929	chr16:54986929:C:T	rs4784445	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr16	54986936	54986937	chr16:54986937:G:A	rs4784446	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr16	55102903	55102904	chr16:55102904:C:T	rs1463633	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	55274037	55274038	chr16:55274038:T:C	rs8045188	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr16	55330204	55330205	chr16:55330205:G:C	rs139328528	G	C	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	55614983	55614984	chr16:55614984:G:A	rs67985203	G	A	g	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	55816818	55816819	chr16:55816819:G:A	rs76336259	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr16	56041317	56041318	chr16:56041318:C:T	rs7196109	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr16	56120638	56120639	chr16:56120639:T:A	rs752266704	T	A	T	Hoxd3_MA0912.1	6	1	+	8.344375935850262	4.00668487475622	CTTGAGTCATTAAACT
chr16	56605887	56605888	chr16:56605888:G:C	rs1008766	G	C	G	Hoxd3_MA0912.1	2	1	+	8.976739489824704	7.1932650721307585	CAGAGCCAATTACTGT
chr16	56605908	56605909	chr16:56605909:T:A	rs67245376	T	A	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr16	56784346	56784347	chr16:56784347:A:C	rs77755067	A	C	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr16	56867375	56867376	chr16:56867376:A:T	rs2304480	A	T	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr16	56953063	56953064	chr16:56953064:C:T	rs76315536	C	T	C	Hoxd3_MA0912.1	15	1	+	7.006304980073905	7.784009548661913	TGGTTGTAATGACCCC
chr16	57082601	57082602	chr16:57082602:T:A	rs27194	T	A	A	Hoxd3_MA0912.1	8	1	-	9.316492751077002	4.825815564310009	CTGAGTCAATTATCCC
chr16	57310377	57310378	chr16:57310378:G:A	rs144889122	G	A	G	Hoxd3_MA0912.1	13	1	-	8.216934829549967	7.612698101037594	TTGTTTCAATTAGCGG
chr16	57604092	57604093	chr16:57604093:G:A	rs16958195	G	A	G	Hoxd3_MA0912.1	15	1	-	8.134698612960104	8.912403181548113	ATGAGTCAATTACAAC
chr16	57627637	57627638	chr16:57627638:G:A	rs78292420	G	A	G	Hoxd3_MA0912.1	1	1	+	7.925197974603909	8.783022247978097	CGAGTGTAATTACTGT
chr16	57633297	57633298	chr16:57633298:C:G	rs11645008	C	G	G	Hoxd3_MA0912.1	5	1	+	7.667322599870827	7.855848933551664	ATGGGCTCATTGACTT
chr16	57871271	57871272	chr16:57871272:G:A	rs366589	G	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr16	57882930	57882931	chr16:57882931:A:G	rs9932826	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr16	57885129	57885130	chr16:57885130:C:T	rs11643127	C	T	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	58078800	58078801	chr16:58078801:G:A	rs11076219	G	A	A	Hoxd3_MA0912.1	13	1	+	7.466359221072395	8.440200403273103	CTGGCTCAATTACGTT
chr16	58413485	58413486	chr16:58413486:C:T	rs8058872	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr16	58630064	58630065	chr16:58630065:T:C	rs752651422	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr16	58630078	58630079	chr16:58630079:T:C	rs71389029	T	C	T	Hoxd3_MA0912.1	2	1	+	6.864799092518179	6.398515244374977	TTTGGCCAATTGCCGC
chr16	58685025	58685026	chr16:58685026:G:A	rs8058969	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	58686961	58686962	chr16:58686962:G:T	rs112643426	G	T	g	Hoxd3_MA0912.1	15	1	-	9.418604213148916	8.531301018148014	ATTAGGTAATTAAAGC
chr16	58721072	58721073	chr16:58721073:C:T	rs76310496	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	58848592	58848593	chr16:58848593:G:A	rs972702896	G	A	G	Hoxd3_MA0912.1	4	1	+	9.57213593814793	8.967899209635556	ATGAGGTAATTAGGGT
chr16	59708081	59708082	chr16:59708082:A:C	rs77102983	A	C	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr16	60261451	60261452	chr16:60261452:G:A	rs74618783	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr16	61645407	61645408	chr16:61645408:T:C	rs11865134	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr16	61682421	61682422	chr16:61682422:T:C	rs16963809	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr16	62610429	62610430	chr16:62610430:A:G	rs434415	A	G	G	Hoxd3_MA0912.1	10	1	-	9.38196390135433	2.6022806587239034	TTCAGTTCATTACCCT
chr16	62656247	62656248	chr16:62656248:A:G	rs59115987	A	G	A	Hoxd3_MA0912.1	13	1	+	9.242421019794804	8.268579837594096	CAGGGGTAATTATATT
chr16	63217582	63217583	chr16:63217583:C:T	rs80231078	C	T	C	Hoxd3_MA0912.1	5	1	-	8.071629965604696	7.347066588811374	TTGATGCAATTATCTC
chr16	63697697	63697698	chr16:63697698:C:T	rs56078845	C	T	c	Hoxd3_MA0912.1	13	1	+	9.183773311426393	8.579536582914018	ATTATCTAATTACCGG
chr16	63775855	63775856	chr16:63775856:C:T	rs11648363	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr16	64053672	64053673	chr16:64053673:A:T	rs7204437	A	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr16	64409893	64409894	chr16:64409894:A:G	rs2076762	A	G	c	Hoxd3_MA0912.1	3	1	-	7.548120954690107	6.8114397321104345	ATGTGGCAATTAGACG
chr16	64468740	64468741	chr16:64468741:T:C	rs8059668	T	C	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr16	64481496	64481497	chr16:64481497:T:G	rs9936857	T	G	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr16	64659672	64659673	chr16:64659673:G:T	rs73583728	G	T	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr16	64659690	64659691	chr16:64659691:C:G	rs144982572	C	G	C	Hoxd3_MA0912.1	5	1	+	8.948102748681324	9.136629082362163	CTTGGCTAATTGCTCT
chr16	64981005	64981006	chr16:64981006:C:T	rs40115	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr16	65574670	65574671	chr16:65574671:C:T	rs4238836	C	T	T	Hoxd3_MA0912.1	12	1	+	7.893294436401879	6.686542516397015	TTGTGCTAATTGCGGG
chr16	65667096	65667097	chr16:65667097:G:A	rs55990266	G	A	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr16	65735891	65735892	chr16:65735892:T:C	rs1115529	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr16	65808963	65808964	chr16:65808964:T:C	rs145752004	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	65952372	65952373	chr16:65952373:G:A	rs9938066	G	A	g	Hoxd3_MA0912.1	15	1	+	10.240934391577614	9.399935764618398	CTGTGATAATTAATCG
chr16	66107805	66107806	chr16:66107806:A:C	rs56410356	A	C	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr16	66661009	66661010	chr16:66661010:G:T	rs355955	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr16	66996526	66996527	chr16:66996527:A:G	chr16:66996527:A:G	A	G	A	Hoxd3_MA0912.1	9	1	-	8.868656237979778	1.9800837784144159	TTGTTCTAATTATGCT
chr16	67480314	67480315	chr16:67480315:T:A	rs979106957	T	A	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr16	68234932	68234933	chr16:68234933:C:T	rs8057119	C	T	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr16	68705069	68705070	chr16:68705070:C:A	rs7187525	C	A	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	68756598	68756599	chr16:68756599:C:T	rs13333528	C	T	C	Hoxd3_MA0912.1	0	1	+	8.49651307848236	8.549018575860291	CTGGTTTCATTACCAC
chr16	68995055	68995056	chr16:68995056:A:G	rs8054743	A	G	a	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr16	69402714	69402715	chr16:69402715:T:G	rs73564476	T	G	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr16	69402760	69402761	chr16:69402761:G:T	rs80268564	G	T	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr16	69404396	69404397	chr16:69404397:G:A	rs143139790	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr16	69466731	69466732	chr16:69466732:A:G	rs8055345	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr16	69700659	69700660	chr16:69700660:C:T	rs11641233	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr16	69727659	69727660	chr16:69727660:C:T	rs689456	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr16	69798267	69798268	chr16:69798268:C:T	rs72783184	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr16	69798281	69798282	chr16:69798282:C:A	rs78261915	C	A	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	69862623	69862624	chr16:69862624:A:G	rs7196917	A	G	A	Hoxd3_MA0912.1	8	1	+	7.181354132292132	0.2927816727267693	TGGGGTCAATGAACCT
chr16	69867202	69867203	chr16:69867203:T:A	rs4985450	T	A	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr16	70166289	70166290	chr16:70166290:G:A	rs56949617	G	A	-	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	70635803	70635804	chr16:70635804:T:C	rs12102523	T	C	T	Hoxd3_MA0912.1	5	1	-	8.848204533483953	9.572767910277278	TTGTTATAATTACTCA
chr16	70647587	70647588	chr16:70647588:C:T	rs11865804	C	T	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr16	71343407	71343408	chr16:71343408:G:A	rs35593117	G	A	G	Hoxd3_MA0912.1	3	1	-	10.294805360468487	11.03148658304816	TAGCGCTAATTACCCT
chr16	71577108	71577109	chr16:71577109:C:A	rs117706276	C	A	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	72167300	72167301	chr16:72167301:T:C	rs17667675	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	72948149	72948150	chr16:72948150:G:A	rs74368856	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	72948172	72948173	chr16:72948173:A:G	rs11075949	A	G	A	Hoxd3_MA0912.1	6	1	-	7.948188162448492	6.162262214267501	CTTGGGTAATGAATGG
chr16	73149439	73149440	chr16:73149440:G:A	rs4451977	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr16	73149468	73149469	chr16:73149469:C:T	rs73595208	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	73176629	73176630	chr16:73176630:A:T	rs59902979	A	T	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr16	73186871	73186872	chr16:73186872:T:C	rs7193833	T	C	C	Hoxd3_MA0912.1	1	1	+	8.279337778195316	6.1952772906591855	TTGGTTCAATTAAGCC
chr16	73329414	73329415	chr16:73329415:C:T	rs62057270	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr16	73348205	73348206	chr16:73348206:T:G	rs147633818	T	G	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr16	73395538	73395539	chr16:73395539:T:C	rs4636929	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr16	73569026	73569027	chr16:73569027:A:G	rs862227	A	G	A	Hoxd3_MA0912.1	8	1	+	8.574019402640378	1.6854469430750163	CTGTTTCAATTAATGC
chr16	74100411	74100412	chr16:74100412:G:A	rs7184896	G	A	A	Hoxd3_MA0912.1	3	1	+	9.205770372490067	9.319868123529089	TTTGGTTAATTACAAC
chr16	74186726	74186727	chr16:74186727:C:T	rs114986259	C	T	C	Hoxd3_MA0912.1	15	1	+	7.972890173416565	8.750594742004573	TGGAACTAATTATCGC
chr16	74398806	74398807	chr16:74398807:G:A	rs536515852	G	A	.	Hoxd3_MA0912.1	17	0	-	0	0	.
chr16	74578131	74578132	chr16:74578132:G:C	rs8056718	G	C	G	Hoxd3_MA0912.1	12	1	+	8.754392108087243	9.721914339026274	TTTGTTTAATTAGACC
chr16	74586978	74586979	chr16:74586979:G:A	rs6564144	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr16	74831254	74831255	chr16:74831255:A:G	rs2098744	A	G	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr16	74860023	74860024	chr16:74860024:A:G	rs62052947	A	G	A	Hoxd3_MA0912.1	9	1	-	7.370044693543818	0.48147223397845423	GTGCCATAATTACCCT
chr16	74950742	74950743	chr16:74950743:T:C	rs113336027	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr16	75023205	75023206	chr16:75023206:C:G	rs12921231	C	G	G	Hoxd3_MA0912.1	4	1	-	9.874319993099412	8.29624208238633	ATGAGTTAATTACAAG
chr16	75186110	75186111	chr16:75186111:C:A	rs7205074	C	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	75196116	75196117	chr16:75196117:A:G	rs1559361	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	75196138	75196139	chr16:75196139:A:G	rs3948510	A	G	A	Hoxd3_MA0912.1	11	1	+	8.072095204352006	6.2861692561710125	TGGGAGTAATTAGTTT
chr16	75326389	75326390	chr16:75326390:T:A	rs72804154	T	A	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr16	75389050	75389051	chr16:75389051:G:A	rs59800961	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr16	75603407	75603408	chr16:75603408:A:T	rs74027438	A	T	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	76008883	76008884	chr16:76008884:C:T	rs1846199	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr16	76082558	76082559	chr16:76082559:C:G	rs977044	C	G	C	Hoxd3_MA0912.1	13	1	+	7.7903680960923225	6.212290185379239	TTAAGGCAATTATCCC
chr16	76410821	76410822	chr16:76410822:A:G	rs62051222	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr16	76446358	76446359	chr16:76446359:A:G	rs6564338	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr16	76547935	76547936	chr16:76547936:A:G	rs7187962	A	G	A	Hoxd3_MA0912.1	15	1	-	8.731105543411937	7.953400974823929	GTAAGCTAATTAAACT
chr16	76585124	76585125	chr16:76585125:G:A	rs9923951	G	A	A	Hoxd3_MA0912.1	12	1	-	8.304836560324024	7.0980846403191595	AGGCTGTAATTACCCT
chr16	76614362	76614363	chr16:76614363:T:C	rs72801266	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr16	76796966	76796967	chr16:76796967:G:T	rs72792545	G	T	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr16	76805693	76805694	chr16:76805694:A:C	rs75979951	A	C	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr16	76848954	76848955	chr16:76848955:A:C	rs80060704	A	C	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr16	76988884	76988885	chr16:76988885:C:A	rs4888585	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	77173174	77173175	chr16:77173175:C:A	rs7190814	C	A	A	Hoxd3_MA0912.1	6	1	+	7.6868666343587595	5.135101521445712	TTTGGACAATTACTCC
chr16	77404992	77404993	chr16:77404993:G:A	rs66527858	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	77503595	77503596	chr16:77503596:C:T	rs13336130	C	T	T	Hoxd3_MA0912.1	1	1	+	8.06907351524034	10.153134002776472	CCGGACTAATTAACAC
chr16	77503596	77503597	chr16:77503597:G:A	rs1239874241	G	A	G	Hoxd3_MA0912.1	2	1	+	8.06907351524034	6.619238471083302	CCGGACTAATTAACAC
chr16	77569327	77569328	chr16:77569328:C:T	rs415745	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	77588046	77588047	chr16:77588047:C:T	rs375426114	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	77681142	77681143	chr16:77681143:T:C	rs9930144	T	C	T	Hoxd3_MA0912.1	8	1	-	10.013084884017816	3.1245124244524556	CAGGGGTAATTACAGG
chr16	77738101	77738102	chr16:77738102:A:G	rs17716830	A	G	A	Hoxd3_MA0912.1	8	1	+	8.904110984332112	2.01553852476675	ATGTGTCAATTACTTT
chr16	77780281	77780282	chr16:77780282:T:C	rs12927467	T	C	t	Hoxd3_MA0912.1	22	0	-	0	0	.
chr16	77947230	77947231	chr16:77947231:G:C	rs10454707	G	C	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	78071468	78071469	chr16:78071469:T:C	rs12925573	T	C	T	Hoxd3_MA0912.1	0	1	+	8.603009187649924	8.550503690271995	TTGCTGTAATTAAAAC
chr16	78196404	78196405	chr16:78196405:C:G	rs76497356	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr16	78292456	78292457	chr16:78292457:C:G	rs11150054	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr16	78325626	78325627	chr16:78325627:T:C	rs12926541	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr16	78325632	78325633	chr16:78325633:C:T	rs115122687	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr16	78325633	78325634	chr16:78325634:G:A	rs181689983	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	78386877	78386878	chr16:78386878:G:A	rs11545029	G	A	G	Hoxd3_MA0912.1	5	1	+	7.420244319987402	6.695680943194079	TAGAAGCAATGACCCT
chr16	78386889	78386890	chr16:78386890:G:A	rs74944733	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr16	78478625	78478626	chr16:78478626:A:C	rs9934078	A	C	C	Hoxd3_MA0912.1	6	1	-	9.956825560915744	3.2121893915034168	CTGGAATAATTAATGC
chr16	78478642	78478643	chr16:78478643:T:G	rs9936255	T	G	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr16	78483786	78483787	chr16:78483787:T:G	rs2667570	T	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr16	78483824	78483825	chr16:78483825:A:T	rs2667571	A	T	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	78491914	78491915	chr16:78491915:A:G	rs12716855	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	78494778	78494779	chr16:78494779:T:G	rs2738723	T	G	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr16	78504894	78504895	chr16:78504895:A:G	rs1877278	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr16	78681688	78681689	chr16:78681689:T:G	rs2738622	T	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr16	78691884	78691885	chr16:78691885:G:C	rs142535583	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	78925430	78925431	chr16:78925431:A:G	rs116918782	A	G	A	Hoxd3_MA0912.1	5	1	+	10.286917142607479	11.011480519400802	ATGGAATAATTACCTT
chr16	79001090	79001091	chr16:79001091:A:G	rs112123364	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr16	79008985	79008986	chr16:79008986:A:G	rs34310485	A	G	A	Hoxd3_MA0912.1	9	1	-	7.697701284961381	0.8091288253960194	TCGGGATAATTGCACT
chr16	79049224	79049225	chr16:79049225:G:A	rs60349708	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr16	79171187	79171188	chr16:79171188:T:A	rs12920362	T	A	T	Hoxd3_MA0912.1	11	1	-	8.530480767672977	4.192789706578935	ATGTTGTAATTATCTG
chr16	79287569	79287570	chr16:79287570:C:T	rs73571317	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	79492327	79492328	chr16:79492328:A:G	rs80341802	A	G	A	Hoxd3_MA0912.1	12	1	-	9.983403496782445	11.19015541678731	TTGTATTAATTATAGT
chr16	79588188	79588189	chr16:79588189:T:A	rs76587823	T	A	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr16	79645471	79645472	chr16:79645472:A:G	rs8055105	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	79688219	79688220	chr16:79688220:C:T	rs59665754	C	T	t	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr16	79836879	79836880	chr16:79836880:G:C	rs7190320	G	C	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr16	79848428	79848429	chr16:79848429:C:T	rs11641099	C	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr16	79971197	79971198	chr16:79971198:A:C	rs4344763	A	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr16	80082789	80082790	chr16:80082790:C:A	rs62050789	C	A	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr16	80418342	80418343	chr16:80418343:A:G	rs1125733	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr16	80457669	80457670	chr16:80457670:C:A	rs10514499	C	A	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr16	80609619	80609620	chr16:80609620:T:C	rs11866077	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr16	80670477	80670478	chr16:80670478:G:A	rs570107004	G	A	G	Hoxd3_MA0912.1	0	1	+	7.934631512686383	9.255079308008686	GTGAGTCAATTAAACC
chr16	80998044	80998045	chr16:80998045:T:G	rs2549865	T	G	T	Hoxd3_MA0912.1	0	1	-	9.111225706197912	9.775154340758718	ATGATCCAATTAAACT
chr16	81072149	81072150	chr16:81072150:G:A	rs112904811	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr16	81159208	81159209	chr16:81159209:G:A	rs4340342	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	81220719	81220720	chr16:81220720:G:A	rs10871406	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr16	81374413	81374414	chr16:81374414:C:G	rs368145366	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr16	81543907	81543908	chr16:81543908:C:G	rs115106062	C	G	C	Hoxd3_MA0912.1	5	1	+	9.37896656735695	9.567492901037786	CTGAGCTAATTGCAGG
chr16	81593693	81593694	chr16:81593694:C:T	rs7199054	C	T	C	Hoxd3_MA0912.1	14	1	+	7.270659561412153	6.706323115279863	TTGAGCTCATTGGCCG
chr16	81630361	81630362	chr16:81630362:G:A	rs116998281	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr16	81692604	81692605	chr16:81692605:G:T	rs73600481	G	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr16	81784106	81784107	chr16:81784107:C:T	rs11642139	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr16	81792760	81792761	chr16:81792761:C:T	rs146124551	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr16	81832964	81832965	chr16:81832965:G:C	rs57963515	G	C	G	Hoxd3_MA0912.1	4	1	+	6.3295195542674225	4.7514416435543385	CTGGGGCCATGACAGT
chr16	81890365	81890366	chr16:81890366:C:A	rs4889424	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	81890391	81890392	chr16:81890392:A:G	rs79161751	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr16	82043974	82043975	chr16:82043975:T:C	rs138259026	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr16	82171425	82171426	chr16:82171426:T:C	rs2911378	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	82300760	82300761	chr16:82300761:G:A	rs7197718	G	A	G	Hoxd3_MA0912.1	3	1	-	8.41397673663134	9.150657959211014	CTGCGGTAATTAAGCA
chr16	82387093	82387094	chr16:82387094:T:C	rs566746318	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr16	82502650	82502651	chr16:82502651:C:T	rs1865229	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr16	82543973	82543974	chr16:82543974:T:C	rs112410852	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr16	82543979	82543980	chr16:82543980:G:A	rs7197907	G	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	82580431	82580432	chr16:82580432:C:T	rs16957764	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr16	82694421	82694422	chr16:82694422:A:G	rs117685833	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr16	82789240	82789241	chr16:82789241:C:A	rs8050902	C	A	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr16	82815566	82815567	chr16:82815567:G:C	rs9926034	G	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr16	82829625	82829626	chr16:82829626:C:G	rs10492860	C	G	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr16	82954266	82954267	chr16:82954267:T:G	rs11639621	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	83072695	83072696	chr16:83072696:G:T	rs3935908	G	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	83137358	83137359	chr16:83137359:G:A	rs192031737	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	83215836	83215837	chr16:83215837:A:G	rs8046313	A	G	a	Hoxd3_MA0912.1	11	1	+	8.06282306060318	6.276897112422185	TTGTGTTCATGACCTT
chr16	83248101	83248102	chr16:83248102:G:A	rs8056448	G	A	G	Hoxd3_MA0912.1	5	1	-	7.325767156695947	7.643088598582355	CTGATCTCATTAGCAC
chr16	83267515	83267516	chr16:83267516:G:C	rs78341439	G	C	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr16	83474149	83474150	chr16:83474150:A:T	chr16:83474150:A:T	A	T	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	83514294	83514295	chr16:83514295:A:T	rs4583231	A	T	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	83654039	83654040	chr16:83654040:G:A	rs8051748	G	A	G	Hoxd3_MA0912.1	10	1	+	7.327306870157816	2.521565993707907	GTGGGGTAATGAATGC
chr16	83744622	83744623	chr16:83744623:A:G	rs116135048	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	83833024	83833025	chr16:83833025:C:G	rs34639674	C	G	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr16	83863082	83863083	chr16:83863083:G:A	rs78621345	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr16	83975796	83975797	chr16:83975797:T:C	rs2247470	T	C	C	Hoxd3_MA0912.1	1	1	+	8.504812107633576	6.420751620097446	TTGTGCTAATTAGCAA
chr16	84016256	84016257	chr16:84016257:A:G	rs9927180	A	G	G	Hoxd3_MA0912.1	10	1	-	9.944562833158727	3.164879590528299	CTGTAATAATTACCAT
chr16	84105869	84105870	chr16:84105870:T:C	rs80125726	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr16	84199741	84199742	chr16:84199742:G:A	rs7185078	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	84296555	84296556	chr16:84296556:T:C	rs1862806	T	C	T	Hoxd3_MA0912.1	8	1	-	8.60079547032447	1.7122230107591072	CTGGGGTCATTAATCA
chr16	84345141	84345142	chr16:84345142:C:A	rs74373329	C	A	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr16	84398366	84398367	chr16:84398367:C:T	rs12148971	C	T	.	Hoxd3_MA0912.1	14	1	+	7.681395241978562	7.117058795846271	CTGAGATCATGACACT
chr16	84450611	84450612	chr16:84450612:G:A	rs13337415	G	A	G	Hoxd3_MA0912.1	12	1	-	6.1305898521778985	4.923837932173035	CTGCGCCAATGACGCT
chr16	84516655	84516656	chr16:84516656:T:C	rs12599000	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr16	84609910	84609911	chr16:84609911:T:C	rs6420383	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr16	84735869	84735870	chr16:84735870:C:T	rs563833599	C	T	c	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr16	84738385	84738386	chr16:84738386:C:T	rs115281405	C	T	C	Hoxd3_MA0912.1	10	1	-	8.213390726709667	3.407649850259758	TTCTGTTAATGACACT
chr16	84738405	84738406	chr16:84738406:A:C	rs74029990	A	C	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr16	84738412	84738413	chr16:84738413:G:A	rs11645413	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr16	84807146	84807147	chr16:84807147:C:T	rs6564078	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr16	84961283	84961284	chr16:84961284:T:G	rs79785252	T	G	T	Hoxd3_MA0912.1	1	1	+	7.111600167966359	5.027539680430228	CTGAGCCCATTACCAC
chr16	84979907	84979908	chr16:84979908:C:T	rs12447590	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	85005341	85005342	chr16:85005342:C:T	rs9921436	C	T	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr16	85246593	85246594	chr16:85246594:G:A	rs4073556	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr16	85335438	85335439	chr16:85335439:G:A	rs960617225	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	85445243	85445244	chr16:85445244:C:T	rs145193691	C	T	C	Hoxd3_MA0912.1	3	1	+	7.100502519684678	7.837183742264351	GTGCGGTAATTAGAGG
chr16	85452311	85452312	chr16:85452312:C:T	rs4783207	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	85485952	85485953	chr16:85485953:T:C	rs968738	T	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr16	85500417	85500418	chr16:85500418:C:A	rs7500672	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr16	85643120	85643121	chr16:85643121:G:C	rs12917784	G	C	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr16	85643121	85643122	chr16:85643122:C:T	rs59817555	C	T	C	Hoxd3_MA0912.1	15	1	-	9.183217305292708	8.342218678333492	CAGATGTAATTAACAG
chr16	85721680	85721681	chr16:85721681:A:T	rs381170	A	T	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr16	85729645	85729646	chr16:85729646:C:G	rs116831625	C	G	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr16	85753760	85753761	chr16:85753761:C:A	rs1163607754	C	A	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr16	85937111	85937112	chr16:85937112:C:G	rs4843867	C	G	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr16	85937159	85937160	chr16:85937160:C:G	rs183404601	C	G	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr16	86074913	86074914	chr16:86074914:C:T	rs11648611	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr16	86093800	86093801	chr16:86093801:C:T	rs885009	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr16	86207610	86207611	chr16:86207611:G:A	rs276954	G	A	A	Hoxd3_MA0912.1	15	1	-	7.525757351859933	8.30346192044794	CTGGGGTAATGGCTGC
chr16	86249224	86249225	chr16:86249225:C:G	rs2047396	C	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr16	86305901	86305902	chr16:86305902:C:A	rs12149896	C	A	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr16	86495132	86495133	chr16:86495133:G:C	rs11117506	G	C	G	Hoxd3_MA0912.1	15	1	-	5.806128647607773	5.759824079566086	CGGGTGCAATTGCCCC
chr16	86495134	86495135	chr16:86495135:G:A	rs11865162	G	A	A	Hoxd3_MA0912.1	13	1	-	5.806128647607773	5.2018919190954	CGGGTGCAATTGCCCC
chr16	86498885	86498886	chr16:86498886:G:C	rs72628292	G	C	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	86514757	86514758	chr16:86514758:C:A	rs72818129	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr16	86601767	86601768	chr16:86601768:T:A	rs9929062	T	A	T	Hoxd3_MA0912.1	7	1	-	7.454742430815676	0.6750591881852477	TGGGGGCAATTAGACT
chr16	86761937	86761938	chr16:86761938:C:G	rs116015612	C	G	C	Hoxd3_MA0912.1	12	1	-	9.441931288515617	10.409453519454647	CTGATGTAATTAGCAG
chr16	86825072	86825073	chr16:86825073:T:G	rs115595161	T	G	T	Hoxd3_MA0912.1	1	1	-	7.767260802834212	6.909436529460022	CACATCTAATTACCTG
chr16	87061792	87061793	chr16:87061793:C:T	rs8059887	C	T	c	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	87062660	87062661	chr16:87062661:A:C	rs28742230	A	C	A	Hoxd3_MA0912.1	7	1	+	9.421038842558445	7.4470964763779275	ATTTGTTAATTAACAT
chr16	87216375	87216376	chr16:87216376:C:T	rs4628981	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr16	87216412	87216413	chr16:87216413:C:T	rs1110339	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr16	87386775	87386776	chr16:87386776:G:A	rs750957	G	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr16	87557345	87557346	chr16:87557346:G:A	rs58397774	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr16	87557361	87557362	chr16:87557362:G:T	chr16:87557362:G:T	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr16	87557363	87557364	chr16:87557364:G:A	rs13337316	G	A	G	Hoxd3_MA0912.1	1	1	+	6.395816798196256	7.253641071570447	CGGGTGTCATTGCCCT
chr16	87557366	87557367	chr16:87557367:T:G	rs960169639	T	G	T	Hoxd3_MA0912.1	4	1	+	6.395816798196256	7.00005352670863	CGGGTGTCATTGCCCT
chr16	87657047	87657048	chr16:87657048:C:G	rs66479826	C	G	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	87658134	87658135	chr16:87658135:C:T	rs1075572	C	T	C	Hoxd3_MA0912.1	2	1	-	7.050007914305266	5.600172870148227	TTGGGCCCATTAACAC
chr16	87658135	87658136	chr16:87658136:A:G	rs1110600	A	G	G	Hoxd3_MA0912.1	1	1	-	7.050007914305266	4.965947426769135	TTGGGCCCATTAACAC
chr16	87680677	87680678	chr16:87680678:T:C	rs12444352	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr16	87853227	87853228	chr16:87853228:C:T	rs77295914	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	87864934	87864935	chr16:87864935:G:A	rs111880212	G	A	G	Hoxd3_MA0912.1	15	1	+	9.49919440570014	8.658195778740923	TTTGTTTAATTAAAGG
chr16	88039330	88039331	chr16:88039331:G:A	rs76092852	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr16	88104370	88104371	chr16:88104371:A:C	rs60615129	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr16	88107723	88107724	chr16:88107724:C:T	rs28548390	C	T	-	Hoxd3_MA0912.1	26	0	+	0	0	.
chr16	88129787	88129788	chr16:88129788:A:G	rs4843808	A	G	-	Hoxd3_MA0912.1	21	0	-	0	0	.
chr16	88189623	88189624	chr16:88189624:C:T	rs75298316	C	T	-	Hoxd3_MA0912.1	18	0	+	0	0	.
chr16	88229478	88229479	chr16:88229479:G:C	rs112255998	G	C	-	Hoxd3_MA0912.1	13	1	+	7.453377773857418	9.031455684570501	CTGTGGTCATTACGTG
chr16	88409099	88409100	chr16:88409100:G:T	rs8044502	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr16	88550816	88550817	chr16:88550817:C:T	rs13334404	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr16	88686485	88686486	chr16:88686486:G:A	rs960720764	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr16	88686506	88686507	chr16:88686507:T:A	rs570788916	T	A	T	Hoxd3_MA0912.1	7	1	-	7.81391765855558	1.0342344159251526	CTATGCTAATGAGCCT
chr16	88686507	88686508	chr16:88686508:A:G	rs538181754	A	G	A	Hoxd3_MA0912.1	6	1	-	7.81391765855558	6.027991710374588	CTATGCTAATGAGCCT
chr16	88686511	88686512	chr16:88686512:T:C	rs564158035	T	C	T	Hoxd3_MA0912.1	2	1	-	7.81391765855558	9.263752702712619	CTATGCTAATGAGCCT
chr16	88686515	88686516	chr16:88686516:G:T	rs531451699	G	T	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr16	88760836	88760837	chr16:88760837:G:A	rs78777782	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr16	88760837	88760838	chr16:88760838:A:T	rs114896324	A	T	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr16	88782533	88782534	chr16:88782534:G:C	rs74035813	G	C	G	Hoxd3_MA0912.1	3	1	+	8.398602970248076	7.211683052575136	TTTGGGTAATGATCCT
chr16	88782563	88782564	chr16:88782564:C:T	rs140303606	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr16	88835435	88835436	chr16:88835436:C:T	rs75914102	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr16	88835441	88835442	chr16:88835442:T:A	rs11076721	T	A	A	Hoxd3_MA0912.1	11	1	-	8.502726443876869	4.165035382782828	ATGATTTAATGAACTC
chr16	89147024	89147025	chr16:89147025:C:T	rs34387772	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr16	89368662	89368663	chr16:89368663:T:C	rs4785664	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr16	89791698	89791699	chr16:89791699:A:T	rs17226183	A	T	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr16	89825210	89825211	chr16:89825211:G:A	rs11641726	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	267412	267413	chr17:267413:C:T	rs72806005	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	267457	267458	chr17:267458:C:T	rs115118028	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr17	312741	312742	chr17:312742:T:C	rs4074627	T	C	T	Hoxd3_MA0912.1	0	1	-	8.628033417151865	7.307585621829562	ATGGGGTCATTAAGCT
chr17	355273	355274	chr17:355274:A:G	rs11657335	A	G	A	Hoxd3_MA0912.1	10	1	-	10.983627797783466	4.203944555153038	CTGAGCCAATTACCCT
chr17	365102	365103	chr17:365103:A:T	rs4985605	A	T	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	497066	497067	chr17:497067:C:T	rs11247561	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	578749	578750	chr17:578750:T:C	rs72477034	T	C	-	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	682234	682235	chr17:682235:T:G	rs7207469	T	G	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	749414	749415	chr17:749415:A:G	rs4968107	A	G	-	Hoxd3_MA0912.1	21	0	-	0	0	.
chr17	907918	907919	chr17:907919:G:A	rs11658396	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr17	949932	949933	chr17:949933:G:A	rs7221359	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr17	1069381	1069382	chr17:1069382:G:A	rs12937943	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	1116443	1116444	chr17:1116444:T:C	rs12939615	T	C	c	Hoxd3_MA0912.1	0	1	-	8.637351297071437	7.316903501749133	ATGCCGTAATTACCCC
chr17	1142905	1142906	chr17:1142906:A:T	rs115204995	A	T	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr17	1183443	1183444	chr17:1183444:C:T	rs11658851	C	T	T	Hoxd3_MA0912.1	12	1	+	7.4763673282399665	6.269615408235101	CTGGGTTAATGACGAG
chr17	1183444	1183445	chr17:1183445:G:A	rs76420626	G	A	G	Hoxd3_MA0912.1	13	1	+	7.4763673282399665	8.450208510440675	CTGGGTTAATGACGAG
chr17	1564402	1564403	chr17:1564403:G:A	rs9913291	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	1593404	1593405	chr17:1593405:A:G	rs61569184	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr17	1784208	1784209	chr17:1784209:C:G	chr17:1784209:C:G	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr17	1983401	1983402	chr17:1983402:T:A	rs12103776	T	A	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr17	1987836	1987837	chr17:1987837:A:G	rs111651167	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	2138799	2138800	chr17:2138800:C:A	chr17:2138800:C:A	C	A	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	2267133	2267134	chr17:2267134:T:C	rs542608154	T	C	T	Hoxd3_MA0912.1	0	1	+	8.43182869224332	8.379323194865389	TAGGACTAATTAAAGA
chr17	2515428	2515429	chr17:2515429:G:A	rs67061289	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	2809043	2809044	chr17:2809044:C:T	rs991195611	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr17	2937042	2937043	chr17:2937043:T:A	rs16952511	T	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr17	3515221	3515222	chr17:3515222:G:C	rs4790507	G	C	G	Hoxd3_MA0912.1	13	1	-	8.354319939447116	6.776242028734032	CTGCAATCATTACCCT
chr17	3720511	3720512	chr17:3720512:T:G	rs2915562	T	G	T	Hoxd3_MA0912.1	5	1	+	8.00981630393861	7.881021195733039	CTTAGTTAATGGCCCT
chr17	3783958	3783959	chr17:3783959:G:A	rs73318162	G	A	g	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	4040959	4040960	chr17:4040960:A:G	rs4790554	A	G	A	Hoxd3_MA0912.1	10	1	-	8.210733900213722	1.431050657583295	CTGTGTCAATTAGAGC
chr17	4116734	4116735	chr17:4116735:T:C	rs62071007	T	C	T	Hoxd3_MA0912.1	8	1	-	9.002546681642682	2.1139742220773203	TTTATCTAATTAACAC
chr17	4136660	4136661	chr17:4136661:T:C	rs8070665	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr17	4161732	4161733	chr17:4161733:C:A	rs137983727	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr17	4346171	4346172	chr17:4346172:C:G	rs3966810	C	G	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr17	4555913	4555914	chr17:4555914:C:A	rs3760194	C	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr17	4597091	4597092	chr17:4597092:G:A	rs138959040	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	4709768	4709769	chr17:4709769:G:C	rs575861019	G	C	g	Hoxd3_MA0912.1	20	0	+	0	0	.
chr17	4709773	4709774	chr17:4709774:T:C	rs35296728	T	C	t	Hoxd3_MA0912.1	25	0	+	0	0	.
chr17	5252939	5252940	chr17:5252940:C:T	rs34341874	C	T	C	Hoxd3_MA0912.1	3	1	-	7.687336709115179	7.801434460154203	TTGGGTTCATTGAGCT
chr17	5710288	5710289	chr17:5710289:T:C	rs2109610	T	C	T	Hoxd3_MA0912.1	0	1	-	8.373421419989986	7.0529736246676835	ATGATCCAATTACCTC
chr17	5879962	5879963	chr17:5879963:T:C	rs12939052	T	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	5910799	5910800	chr17:5910800:T:C	rs2309446	T	C	C	Hoxd3_MA0912.1	5	1	+	7.125006196462721	6.807684754576313	CTGGGTCCATTAGCAT
chr17	6036066	6036067	chr17:6036067:T:C	rs7221392	T	C	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr17	6172276	6172277	chr17:6172277:C:T	rs17793742	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	6332340	6332341	chr17:6332341:G:A	rs4796467	G	A	G	Hoxd3_MA0912.1	13	1	-	9.320365659421247	8.716128930908873	CTGGATTAATTATCGA
chr17	6570887	6570888	chr17:6570888:G:A	rs79629169	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr17	6603532	6603533	chr17:6603533:A:C	rs12601689	A	C	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr17	6975195	6975196	chr17:6975196:A:G	rs186342	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	7309177	7309178	chr17:7309178:A:C	rs1052368349	A	C	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr17	7841599	7841600	chr17:7841600:G:A	chr17:7841600:G:A	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr17	8174043	8174044	chr17:8174044:G:A	rs73245431	G	A	.	Hoxd3_MA0912.1	33	0	-	0	0	.
chr17	8192270	8192271	chr17:8192271:T:G	rs115748945	T	G	T	Hoxd3_MA0912.1	9	1	+	6.9740261207254886	2.4833489339584958	TTGGTGCAATGACAGC
chr17	8192295	8192296	chr17:8192296:C:G	rs148085988	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr17	8200320	8200321	chr17:8200321:A:C	rs1255414411	A	C	A	Hoxd3_MA0912.1	10	1	-	6.670277214162203	4.696334847981685	GTGGCTTAATTGCCGC
chr17	8200341	8200342	chr17:8200342:A:G	rs547154605	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr17	8295882	8295883	chr17:8295883:T:G	rs115521890	T	G	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr17	8500006	8500007	chr17:8500007:A:G	rs7213261	A	G	a	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	8500008	8500009	chr17:8500009:T:C	rs7217409	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	8789791	8789792	chr17:8789792:G:A	rs12452292	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr17	8789793	8789794	chr17:8789794:G:A	rs4791754	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr17	8953274	8953275	chr17:8953275:C:T	rs10048154	C	T	C	Hoxd3_MA0912.1	8	1	+	7.311354328258437	7.311354328258437	CTGAGCTACTTAGCCT
chr17	9358798	9358799	chr17:9358799:G:C	rs74897954	G	C	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	9615751	9615752	chr17:9615752:G:T	rs8067557	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	9643836	9643837	chr17:9643837:A:T	rs79600226	A	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr17	9770882	9770883	chr17:9770883:T:C	rs6503246	T	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	9836131	9836132	chr17:9836132:G:A	rs7220392	G	A	G	Hoxd3_MA0912.1	15	1	+	8.82257258149946	7.981573954540243	TTGACGTAATTGACCG
chr17	9848420	9848421	chr17:9848421:G:C	rs1402658	G	C	G	Hoxd3_MA0912.1	12	1	+	7.6259428901510695	8.593465121090098	CTGAGCCAATTGGTCT
chr17	9930602	9930603	chr17:9930603:C:T	rs12453192	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr17	10020360	10020361	chr17:10020361:A:G	rs144864696	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr17	10086296	10086297	chr17:10086297:G:A	rs546839992	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	10181899	10181900	chr17:10181900:G:C	rs12942658	G	C	G	Hoxd3_MA0912.1	14	1	-	9.080567098324199	8.90415173303975	GTGTTATAATTACCCT
chr17	10181920	10181921	chr17:10181921:A:G	rs9897300	A	G	a	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr17	10183026	10183027	chr17:10183027:G:C	rs11656779	G	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr17	10252184	10252185	chr17:10252185:C:A	rs4239112	C	A	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr17	10458951	10458952	chr17:10458952:C:T	rs2108606	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	10749006	10749007	chr17:10749007:C:T	rs4792025	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	10867405	10867406	chr17:10867406:G:A	rs1838147	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	11690966	11690967	chr17:11690967:T:C	rs7207235	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr17	11944058	11944059	chr17:11944059:G:A	rs114914586	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	12301916	12301917	chr17:12301917:G:A	rs12450112	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr17	12620668	12620669	chr17:12620669:T:C	rs8066032	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	12666008	12666009	chr17:12666009:G:C	rs565175231	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	12896667	12896668	chr17:12896668:G:A	rs2302068	G	A	A	Hoxd3_MA0912.1	4	1	+	8.885663532542646	8.281426804030271	GTGGGGTAATGACCCT
chr17	13183079	13183080	chr17:13183080:C:G	rs76620258	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr17	13204799	13204800	chr17:13204800:C:T	rs2674947	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr17	13338026	13338027	chr17:13338027:T:A	rs375035345	T	A	T	Hoxd3_MA0912.1	14	1	+	8.12843528227526	7.572391033358971	CAGAGTCAATTACTTC
chr17	13597828	13597829	chr17:13597829:G:T	rs116941714	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr17	13810040	13810041	chr17:13810041:T:C	rs8071029	T	C	T	Hoxd3_MA0912.1	1	1	+	7.945065576388973	5.861005088852842	CTGAGTCAATGAAACC
chr17	13822789	13822790	chr17:13822790:T:A	rs12950141	T	A	T	Hoxd3_MA0912.1	3	1	+	11.237775673866189	11.80211211999848	TTGTTGTAATTAATCT
chr17	13995503	13995504	chr17:13995504:T:C	rs74990346	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr17	14081142	14081143	chr17:14081143:T:C	rs115162438	T	C	T	Hoxd3_MA0912.1	7	1	-	8.661539942099338	1.8818566994689112	CTGTTGCAATTAACTC
chr17	14148217	14148218	chr17:14148218:G:A	rs16949080	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr17	14291703	14291704	chr17:14291704:C:T	rs8076464	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr17	14408979	14408980	chr17:14408980:C:T	rs6502354	C	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr17	14760498	14760499	chr17:14760499:T:C	rs117107591	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr17	15342420	15342421	chr17:15342421:A:G	rs16951399	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr17	15380497	15380498	chr17:15380498:A:G	rs9893357	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	15488764	15488765	chr17:15488765:G:C	rs73978043	G	C	G	Hoxd3_MA0912.1	6	1	-	7.359496590683806	2.40078636945247	CTGGAGCAATGACCAT
chr17	15648556	15648557	chr17:15648557:G:T	rs3785635	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	15659005	15659006	chr17:15659006:T:C	rs10521309	T	C	T	Hoxd3_MA0912.1	0	1	+	7.335872191612505	7.283366694234574	TTGTTGTAATGACGGC
chr17	16240394	16240395	chr17:16240395:T:C	rs4470185	T	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr17	16438778	16438779	chr17:16438779:A:T	rs543792748	A	T	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr17	16585939	16585940	chr17:16585940:G:A	rs79949415	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr17	16821580	16821581	chr17:16821581:T:C	rs3865306	T	C	.	Hoxd3_MA0912.1	27	0	+	0	0	.
chr17	16880183	16880184	chr17:16880184:G:A	rs28581639	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr17	16880187	16880188	chr17:16880188:A:G	rs9908602	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	17042302	17042303	chr17:17042303:A:C	chr17:17042303:A:C	A	C	a	Hoxd3_MA0912.1	15	1	-	6.329009638586109	5.505000501956415	CTGGGCCAATGGCAGT
chr17	17042319	17042320	chr17:17042320:G:T	rs1342496080	G	T	g	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr17	17599891	17599892	chr17:17599892:G:A	rs12941217	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr17	17923097	17923098	chr17:17923098:C:T	rs184503682	C	T	c	Hoxd3_MA0912.1	7	1	+	8.672918271266818	3.8671773948169115	CTGTGCTCATTAAAGC
chr17	17930804	17930805	chr17:17930805:A:G	rs8068820	A	G	A	Hoxd3_MA0912.1	13	1	-	7.297648769318302	7.901885497830676	TGGGCCTAATTAGTGT
chr17	18219156	18219157	chr17:18219157:G:T	rs9903403	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	18219170	18219171	chr17:18219171:G:A	rs6502640	G	A	G	Hoxd3_MA0912.1	12	1	-	7.224269399103266	6.017517479098402	CTGAGGCCATGACCCT
chr17	18219194	18219195	chr17:18219195:G:T	rs9903591	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	18571551	18571552	chr17:18571552:G:T	rs146866501	G	T	-	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	18954743	18954744	chr17:18954744:T:C	rs9903337	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	19696109	19696110	chr17:19696110:G:A	rs28537694	G	A	A	Hoxd3_MA0912.1	3	1	+	7.8473813233550445	7.961479074394068	ATGGAGTCATTAAGGT
chr17	20063533	20063534	chr17:20063534:C:T	rs8066705	C	T	C	Hoxd3_MA0912.1	13	1	+	9.255612073700238	8.651375345187866	TTTAATTAATTGCCGT
chr17	20064448	20064449	chr17:20064449:G:A	rs35191778	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr17	20082727	20082728	chr17:20082728:T:C	rs7210439	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr17	20889682	20889683	chr17:20889683:T:C	rs191342133	T	C	.	Hoxd3_MA0912.1	24	0	-	0	0	.
chr17	21345420	21345421	chr17:21345421:A:G	rs76333417	A	G	G	Hoxd3_MA0912.1	3	1	-	9.428215680489476	8.691534457909803	CTGTGTTCATTACCAT
chr17	21681213	21681214	chr17:21681214:G:A	rs917173380	G	A	.	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	21681219	21681220	chr17:21681220:G:A	rs1334972809	G	A	.	Hoxd3_MA0912.1	29	0	-	0	0	.
chr17	21681228	21681229	chr17:21681229:C:G	rs950041733	C	G	.	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	21681228	21681229	chr17:21681229:C:T	chr17:21681229:C:T	C	T	.	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	21682378	21682379	chr17:21682379:C:G	rs959571177	C	G	.	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr17	21682379	21682380	chr17:21682380:G:A	rs1005750963	G	A	.	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	21762958	21762959	chr17:21762959:C:T	rs1162780015	C	T	.	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr17	21767586	21767587	chr17:21767587:C:T	rs1287973574	C	T	.	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	22145034	22145035	chr17:22145035:G:C	rs78749050	G	C	.	Hoxd3_MA0912.1	13	1	-	8.863497921374785	7.285420010661703	TTATGCTAATTAACAG
chr17	22145053	22145054	chr17:22145054:A:G	rs77846327	A	G	.	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr17	22271899	22271900	chr17:22271900:G:A	rs11868787	G	A	.	Hoxd3_MA0912.1	14	1	+	6.969522182676546	6.025556852912413	ATGTGGCAATGACCGG
chr17	27231925	27231926	chr17:27231926:C:T	rs76315980	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	27338999	27339000	chr17:27339000:G:A	rs322176	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	27368167	27368168	chr17:27368168:A:T	rs1695667	A	T	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr17	27378726	27378727	chr17:27378727:C:T	rs322185	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr17	27505387	27505388	chr17:27505388:A:G	rs7208616	A	G	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr17	27632845	27632846	chr17:27632846:T:C	rs80039903	T	C	T	Hoxd3_MA0912.1	9	1	+	8.030216021708794	1.1416435621434329	TTGGGACAATTAAGCC
chr17	27794000	27794001	chr17:27794001:C:A	rs531702176	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	27985441	27985442	chr17:27985442:A:G	rs4239213	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr17	27991560	27991561	chr17:27991561:A:G	rs4795195	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr17	27993269	27993270	chr17:27993270:T:C	rs59828704	T	C	T	Hoxd3_MA0912.1	8	1	-	7.070494765604959	0.18192230603959636	CTGGCTCAATGACCTT
chr17	28171021	28171022	chr17:28171022:T:C	rs2125846	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	28188790	28188791	chr17:28188791:A:G	rs72843969	A	G	A	Hoxd3_MA0912.1	12	1	-	9.5213932633361	10.728145183340963	CTGATTTAATTATGGT
chr17	28412108	28412109	chr17:28412109:A:G	rs12947270	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	28501219	28501220	chr17:28501220:C:T	rs117004690	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr17	28726527	28726528	chr17:28726528:C:A	rs117607518	C	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr17	28837747	28837748	chr17:28837748:A:C	rs117046600	A	C	a	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	28873103	28873104	chr17:28873104:C:T	rs9897840	C	T	c	Hoxd3_MA0912.1	4	1	-	7.532133496261052	6.927896767748679	TTGTGCTCATGACCCC
chr17	29386226	29386227	chr17:29386227:T:A	rs7218758	T	A	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr17	29649578	29649579	chr17:29649579:A:G	rs3110494	A	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr17	29732737	29732738	chr17:29732738:A:G	rs533873370	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr17	29956283	29956284	chr17:29956284:T:C	rs34625018	T	C	T	Hoxd3_MA0912.1	7	1	-	8.713692959433288	1.9340097168028607	TTTGTTCAATTACACT
chr17	29996480	29996481	chr17:29996481:A:G	rs12944395	A	G	A	Hoxd3_MA0912.1	11	1	+	7.286220024611229	5.500294076430235	CAGGGGCAATTAGGCT
chr17	30095499	30095500	chr17:30095500:C:T	rs28368875	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	30225967	30225968	chr17:30225968:A:G	rs16965623	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	30236480	30236481	chr17:30236481:T:A	rs2020932	T	A	T	Hoxd3_MA0912.1	0	1	+	8.862085573464665	8.145651441525928	TTTTTTTAATTAGCCG
chr17	30667318	30667319	chr17:30667319:T:C	rs373490578	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr17	31390408	31390409	chr17:31390409:G:A	rs113297709	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	31469178	31469179	chr17:31469179:A:G	rs11868735	A	G	A	Hoxd3_MA0912.1	6	1	-	8.573326082838303	6.787400134657313	ATGAGCTAATGAATGC
chr17	31544065	31544066	chr17:31544066:T:C	rs739631	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr17	31600823	31600824	chr17:31600824:G:C	rs223153	G	C	g	Hoxd3_MA0912.1	2	1	+	8.286120254047228	6.502645836353281	CTGCACTAATGACACT
chr17	31600825	31600826	chr17:31600826:A:G	rs73991231	A	G	a	Hoxd3_MA0912.1	4	1	+	8.286120254047228	8.890356982559602	CTGCACTAATGACACT
chr17	31696307	31696308	chr17:31696308:T:C	rs7219892	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	31696311	31696312	chr17:31696312:A:G	rs1265403321	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	31717086	31717087	chr17:31717087:C:G	rs9903688	C	G	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	31859592	31859593	chr17:31859593:C:T	rs11658984	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	31859630	31859631	chr17:31859631:T:G	rs76780987	T	G	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	32083428	32083429	chr17:32083429:T:C	rs75521180	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr17	32154944	32154945	chr17:32154945:G:A	rs72825788	G	A	g	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	32256299	32256300	chr17:32256300:C:T	rs73984135	C	T	C	Hoxd3_MA0912.1	0	1	+	7.699816728246697	7.752322225624628	CTGGGATAATGAATGA
chr17	32283780	32283781	chr17:32283781:G:A	rs528381978	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	32555108	32555109	chr17:32555109:T:C	rs225184	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr17	32817438	32817439	chr17:32817439:T:C	rs28590765	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	33041413	33041414	chr17:33041414:T:C	rs77997139	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	33277670	33277671	chr17:33277671:A:G	rs1391084	A	G	A	Hoxd3_MA0912.1	11	1	+	8.508654546085058	6.722728597904063	TGGTGCTAATTACCCA
chr17	33385953	33385954	chr17:33385954:T:A	rs143467595	T	A	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr17	33436718	33436719	chr17:33436719:C:T	rs1013305257	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	33438262	33438263	chr17:33438263:T:C	rs1354489	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr17	33499371	33499372	chr17:33499372:T:C	rs8081842	T	C	T	Hoxd3_MA0912.1	11	1	-	8.581269457457898	6.795343509276906	ATGACCTAATTACATC
chr17	33528806	33528807	chr17:33528807:G:A	rs17249607	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr17	33688777	33688778	chr17:33688778:T:C	rs11870047	T	C	T	Hoxd3_MA0912.1	6	1	+	8.221654839272077	6.435728891091083	ATGGGGTCATTATCCC
chr17	33797499	33797500	chr17:33797500:T:C	rs923633	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr17	33874045	33874046	chr17:33874046:C:T	rs378448	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr17	33968487	33968488	chr17:33968488:G:A	rs8070999	G	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	33979712	33979713	chr17:33979713:A:G	rs1360948	A	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr17	34171424	34171425	chr17:34171425:G:C	rs540459758	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	34252960	34252961	chr17:34252961:T:C	rs3917884	T	C	T	Hoxd3_MA0912.1	1	1	+	8.633842452732232	6.549781965196104	ATGGGCTAATTGGTCT
chr17	34425438	34425439	chr17:34425439:G:A	rs12939824	G	A	.	Hoxd3_MA0912.1	22	0	-	0	0	.
chr17	34425462	34425463	chr17:34425463:G:A	rs35142915	G	A	.	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr17	34436714	34436715	chr17:34436715:C:A	rs159237	C	A	.	Hoxd3_MA0912.1	34	0	-	0	0	.
chr17	34533885	34533886	chr17:34533886:C:G	rs961575	C	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr17	34736655	34736656	chr17:34736656:A:G	rs12941768	A	G	G	Hoxd3_MA0912.1	15	1	-	8.455597681550831	7.677893112962823	AGGAGGTAATTAAGGT
chr17	35341361	35341362	chr17:35341362:A:C	rs117127726	A	C	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr17	35374985	35374986	chr17:35374986:A:C	rs12947734	A	C	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	35374989	35374990	chr17:35374990:C:G	rs1554041	C	G	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr17	35538220	35538221	chr17:35538221:C:T	rs77523162	C	T	c	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	35717789	35717790	chr17:35717790:G:A	rs72829922	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	35976246	35976247	chr17:35976247:C:T	rs76570261	C	T	C	Hoxd3_MA0912.1	12	1	+	7.472054760707378	6.265302840702514	CGGTCTTAATTACCTG
chr17	35976275	35976276	chr17:35976276:T:C	rs80329614	T	C	T	Hoxd3_MA0912.1	14	1	+	7.472054760707378	8.036391206839669	CGGTCTTAATTACCTG
chr17	36032935	36032936	chr17:36032936:T:C	rs854674	T	C	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	36207767	36207768	chr17:36207768:A:C	rs571343020	A	C	.	Hoxd3_MA0912.1	7	1	+	9.24401102098516	7.270068654804643	TTTATTTAATGACCCT
chr17	36528197	36528198	chr17:36528198:T:C	rs61738887	T	C	T	Hoxd3_MA0912.1	9	1	+	6.900454868348431	0.01188240878306801	TTGTGGCCATTGACCT
chr17	36780084	36780085	chr17:36780085:C:T	rs11263798	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	36910436	36910437	chr17:36910437:C:T	rs11651044	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr17	37068173	37068174	chr17:37068174:T:A	rs8065734	T	A	t	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	37414063	37414064	chr17:37414064:C:T	rs4602077	C	T	c	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	37824270	37824271	chr17:37824271:A:G	rs9890585	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr17	38254506	38254507	chr17:38254507:A:G	rs12452322	A	G	-	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	38677187	38677188	chr17:38677188:G:A	rs189620247	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr17	38680872	38680873	chr17:38680873:A:G	rs76956864	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr17	38789355	38789356	chr17:38789356:G:A	rs72625934	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr17	38896547	38896548	chr17:38896548:C:A	rs3785464	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr17	39064589	39064590	chr17:39064590:A:G	chr17:39064590:A:G	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	39150285	39150286	chr17:39150286:G:A	rs140488481	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr17	39231159	39231160	chr17:39231160:A:G	rs883544	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	39506678	39506679	chr17:39506679:T:C	rs4795375	T	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	39959209	39959210	chr17:39959210:C:T	rs181414560	C	T	C	Hoxd3_MA0912.1	13	1	+	8.34890164733126	7.744664918818886	CTCTTTTAATTGACCT
chr17	39970223	39970224	chr17:39970224:A:G	rs4580194	A	G	A	Hoxd3_MA0912.1	8	1	+	7.450029007158001	0.5614565475926394	CTGGCCCAATTACCGA
chr17	40124662	40124663	chr17:40124663:C:T	rs117374443	C	T	C	Hoxd3_MA0912.1	13	1	-	8.050637199119992	9.0244783813207	GTGTTGTAATTACGGT
chr17	40462968	40462969	chr17:40462969:T:G	rs60061677	T	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr17	40471677	40471678	chr17:40471678:G:A	rs181362792	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	40489894	40489895	chr17:40489895:T:C	rs1901187	T	C	C	Hoxd3_MA0912.1	1	1	+	8.335701443445412	6.2516409559092825	TTGTGCCAATTAGATT
chr17	40607613	40607614	chr17:40607614:T:A	rs803123	T	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr17	40613124	40613125	chr17:40613125:G:C	rs190702856	G	C	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	40613438	40613439	chr17:40613439:A:C	rs138748230	A	C	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr17	40810937	40810938	chr17:40810938:T:C	rs7226176	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr17	40880764	40880765	chr17:40880765:T:C	rs148091209	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr17	40953993	40953994	chr17:40953994:G:A	rs139991984	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr17	40994336	40994337	chr17:40994337:G:A	rs2010385	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr17	41066327	41066328	chr17:41066328:G:A	rs147231420	G	A	G	Hoxd3_MA0912.1	13	1	-	9.903988768391123	9.299752039878749	ATGATGCAATTAACCT
chr17	41179302	41179303	chr17:41179303:T:A	rs369075	T	A	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	41318464	41318465	chr17:41318465:G:T	rs34546214	G	T	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr17	41320758	41320759	chr17:41320759:A:T	rs113317242	A	T	A	Hoxd3_MA0912.1	1	1	-	7.617310070799974	6.391073856638036	GTGAGCCAATTAATCC
chr17	41581196	41581197	chr17:41581197:A:C	rs913479020	A	C	A	Hoxd3_MA0912.1	0	1	-	6.086328121817715	4.049446194556675	TGGGGCTCATTGCCCC
chr17	41630162	41630163	chr17:41630163:C:T	rs12937570	C	T	T	Hoxd3_MA0912.1	15	1	+	8.86597032694268	9.643674895530689	TTGTGTTAATTATAAC
chr17	41711060	41711061	chr17:41711061:G:A	rs12453761	G	A	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr17	41711090	41711091	chr17:41711091:G:A	chr17:41711091:G:A	G	A	G	Hoxd3_MA0912.1	0	1	-	7.36213340322174	7.414638900599669	CAGATGTAATGAGCCG
chr17	41894866	41894867	chr17:41894867:C:G	rs8076301	C	G	G	Hoxd3_MA0912.1	1	1	+	9.886747023048002	9.886747023048002	TCGTATTAATTAACCT
chr17	41895917	41895918	chr17:41895918:T:C	rs933581943	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	42183615	42183616	chr17:42183616:C:T	rs58755779	C	T	C	Hoxd3_MA0912.1	12	1	-	8.685670208180216	9.653192439119247	TTTTTTTAATTAGCGG
chr17	42320249	42320250	chr17:42320250:G:A	rs370059164	G	A	G	Hoxd3_MA0912.1	13	1	-	8.128063670995571	7.523826942483197	TGGAGCTAATTGACCG
chr17	42389131	42389132	chr17:42389132:T:A	rs570361581	T	A	T	Hoxd3_MA0912.1	4	1	-	9.401795758794309	9.401795758794309	CTCTAGTAATTACTCT
chr17	42548827	42548828	chr17:42548828:C:G	rs145141705	C	G	c	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	43360178	43360179	chr17:43360179:T:C	rs4792988	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr17	43360183	43360184	chr17:43360184:T:C	rs4792989	T	C	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr17	43360204	43360205	chr17:43360205:A:C	rs9892278	A	C	A	Hoxd3_MA0912.1	11	1	+	11.15734930796532	4.412713138552991	TTGTGATAATTAACTT
chr17	43360235	43360236	chr17:43360236:T:C	rs9906853	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr17	43453534	43453535	chr17:43453535:G:T	rs2880712	G	T	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr17	43680557	43680558	chr17:43680558:A:G	rs16940095	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr17	43762860	43762861	chr17:43762861:T:C	rs4792910	T	C	T	Hoxd3_MA0912.1	8	1	-	7.774608937251861	0.8860364776864977	ATGAGGTCATTAGGCT
chr17	44095674	44095675	chr17:44095675:T:G	rs561116771	T	G	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	44307782	44307783	chr17:44307783:A:G	rs564496758	A	G	A	Hoxd3_MA0912.1	9	1	-	7.815948651171581	0.9273761916062186	ATGGGGTCATTGATCT
chr17	44307786	44307787	chr17:44307787:C:T	rs528699680	C	T	C	Hoxd3_MA0912.1	5	1	-	7.815948651171581	7.091385274378258	ATGGGGTCATTGATCT
chr17	44955856	44955857	chr17:44955857:G:A	rs8073976	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr17	45009814	45009815	chr17:45009815:G:A	rs35103016	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr17	45039310	45039311	chr17:45039311:G:A	rs76453367	G	A	-	Hoxd3_MA0912.1	27	0	+	0	0	.
chr17	45064880	45064881	chr17:45064881:G:T	rs8073198	G	T	G	Hoxd3_MA0912.1	12	1	-	8.031861554951584	8.031861554951584	CTGAGTTAAGTACCTT
chr17	45141309	45141310	chr17:45141310:G:A	rs60289499	G	A	G	Hoxd3_MA0912.1	3	1	+	8.073386533022187	8.187484284061211	TGGGTCTAATTACATC
chr17	45161239	45161240	chr17:45161240:A:C	rs555865185	A	C	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr17	45299634	45299635	chr17:45299635:C:T	rs149496255	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr17	45582608	45582609	chr17:45582609:T:C	rs2668680	T	C	.	Hoxd3_MA0912.1	1	1	+	8.46802292855026	6.383962441014131	ATGTTTCAATTACCGG
chr17	45640660	45640661	chr17:45640661:C:T	rs80175393	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr17	45714959	45714960	chr17:45714960:C:T	rs56220242	C	T	T	Hoxd3_MA0912.1	12	1	-	6.996394452982539	7.9639166839215685	ATGAGCCAATTAGGCC
chr17	45714991	45714992	chr17:45714992:A:G	rs56160448	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	45728648	45728649	chr17:45728649:G:A	rs4401083	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr17	45730954	45730955	chr17:45730955:G:A	rs62054389	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr17	45735257	45735258	chr17:45735258:G:A	rs62054399	G	A	G	Hoxd3_MA0912.1	0	1	+	7.934631512686383	9.255079308008686	GTGAGTCAATTAAACC
chr17	45818286	45818287	chr17:45818287:A:G	rs4277389	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	45918773	45918774	chr17:45918774:T:C	rs8080903	T	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr17	45938079	45938080	chr17:45938080:A:G	rs12150229	A	G	A	Hoxd3_MA0912.1	9	1	-	9.780549496739082	2.8919770371737212	TTGATTTCATTAATGT
chr17	46118057	46118058	chr17:46118058:A:C	rs62061852	A	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	46163130	46163131	chr17:46163131:T:C	rs76222986	T	C	T	Hoxd3_MA0912.1	9	1	+	8.181088654794284	1.292516195228921	TCTATGTAATTACCCG
chr17	46894908	46894909	chr17:46894909:A:G	rs197927	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr17	46894934	46894935	chr17:46894935:G:A	rs114374236	G	A	G	Hoxd3_MA0912.1	15	1	+	6.154104107475647	5.313105480516431	ACGGGGTCATTAGCGG
chr17	47001483	47001484	chr17:47001484:T:A	rs11079747	T	A	.	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	47051395	47051396	chr17:47051396:T:C	rs1056064	T	C	.	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	47070319	47070320	chr17:47070320:C:T	rs2002537	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	47313827	47313828	chr17:47313828:G:T	rs73322325	G	T	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	47468011	47468012	chr17:47468012:T:G	rs2085755	T	G	t	Hoxd3_MA0912.1	18	0	-	0	0	.
chr17	47869273	47869274	chr17:47869274:C:T	rs112518684	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr17	47904552	47904553	chr17:47904553:G:A	rs60123006	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr17	47930890	47930891	chr17:47930891:C:G	rs9903223	C	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr17	48086179	48086180	chr17:48086180:T:G	rs117988611	T	G	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	48254131	48254132	chr17:48254132:C:T	rs9910351	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr17	48587245	48587246	chr17:48587246:C:T	rs2740752	C	T	.	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr17	48752668	48752669	chr17:48752669:T:G	rs6504544	T	G	G	Hoxd3_MA0912.1	6	1	+	8.764056389625742	2.0194202202134113	TGGAGCTCATTACCCT
chr17	48869634	48869635	chr17:48869635:C:T	rs12449856	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr17	48993711	48993712	chr17:48993712:C:T	rs2411759	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr17	49134295	49134296	chr17:49134296:C:G	rs12452190	C	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr17	49371741	49371742	chr17:49371742:C:T	rs12449986	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr17	49371777	49371778	chr17:49371778:T:A	rs28404278	T	A	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	49469179	49469180	chr17:49469180:T:C	rs11079871	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr17	49470293	49470294	chr17:49470294:T:C	rs753683150	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	49868691	49868692	chr17:49868692:C:T	rs60586860	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr17	49908832	49908833	chr17:49908833:G:A	rs271681	G	A	A	Hoxd3_MA0912.1	12	1	-	9.153341452856132	7.946589532851268	CAGAGGTAATTACGGG
chr17	50216405	50216406	chr17:50216406:C:T	rs2586503	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	50326464	50326465	chr17:50326465:T:C	rs8068961	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr17	50330853	50330854	chr17:50330854:C:T	rs72832425	C	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr17	50720275	50720276	chr17:50720276:A:T	rs74604055	A	T	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	50849903	50849904	chr17:50849904:T:C	rs7214434	T	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	51046080	51046081	chr17:51046081:T:C	rs547088055	T	C	T	Hoxd3_MA0912.1	11	1	-	10.764055590579268	8.978129642398274	TTGTTTTAATTATCCT
chr17	51126287	51126288	chr17:51126288:G:T	rs73988532	G	T	.	Hoxd3_MA0912.1	16	0	-	0	0	.
chr17	51126288	51126289	chr17:51126289:C:T	rs73988533	C	T	.	Hoxd3_MA0912.1	15	1	-	7.502011399797617	6.661012772838401	CTGCTCTCATTAACTG
chr17	51479681	51479682	chr17:51479682:G:C	rs8073766	G	C	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	51572187	51572188	chr17:51572188:A:G	rs4794264	A	G	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr17	51643858	51643859	chr17:51643859:A:C	rs28461935	A	C	A	Hoxd3_MA0912.1	11	1	+	8.248255381927438	1.5036192125151082	TTTGACTCATTACCTT
chr17	51675220	51675221	chr17:51675221:T:C	rs16950359	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr17	51948081	51948082	chr17:51948082:G:A	rs74714865	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	51958447	51958448	chr17:51958448:T:C	rs117990940	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	52446653	52446654	chr17:52446654:C:G	rs72841038	C	G	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	52470539	52470540	chr17:52470540:A:G	rs12449336	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr17	52495854	52495855	chr17:52495855:C:T	rs72841074	C	T	C	Hoxd3_MA0912.1	7	1	+	7.9873680407651	3.1816271643151914	TTGGACTCATTACGTT
chr17	52999967	52999968	chr17:52999968:A:G	rs180794466	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr17	53100448	53100449	chr17:53100449:A:G	rs1512864	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	53100452	53100453	chr17:53100453:C:T	rs1512865	C	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	53635723	53635724	chr17:53635724:A:G	rs6504841	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr17	53822107	53822108	chr17:53822108:A:T	rs11651215	A	T	A	Hoxd3_MA0912.1	13	1	-	9.739115125616854	9.739115125616854	AAGAGATAATTAATCT
chr17	53901134	53901135	chr17:53901135:C:A	chr17:53901135:C:A	C	A	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr17	54340042	54340043	chr17:54340043:C:T	rs2164161	C	T	T	Hoxd3_MA0912.1	12	1	+	9.03491244502329	7.828160525018427	CTGTTGTCATTACTGT
chr17	54340049	54340050	chr17:54340050:A:T	rs9913604	A	T	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	54985541	54985542	chr17:54985542:C:A	rs10468513	C	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr17	55286995	55286996	chr17:55286996:T:A	rs58075230	T	A	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr17	55402185	55402186	chr17:55402186:C:T	rs11650101	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr17	55444720	55444721	chr17:55444721:G:T	rs12943795	G	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr17	55533529	55533530	chr17:55533530:G:A	rs8082684	G	A	G	Hoxd3_MA0912.1	15	1	-	9.159478240506644	9.937182809094653	ATTTGTTAATTACTCC
chr17	55603676	55603677	chr17:55603677:G:T	rs1506590	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr17	55859377	55859378	chr17:55859378:G:T	rs79394608	G	T	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	56174486	56174487	chr17:56174487:T:A	rs986683	T	A	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	56174487	56174488	chr17:56174488:C:T	rs2192229	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr17	56257954	56257955	chr17:56257955:A:T	rs56138213	A	T	A	Hoxd3_MA0912.1	15	1	-	7.5007747102334505	5.835766946644539	GTGGAGTAATGACAGT
chr17	56875182	56875183	chr17:56875183:G:C	rs11870932	G	C	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	57266007	57266008	chr17:57266008:G:A	rs7223919	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr17	57294796	57294797	chr17:57294797:G:A	rs11657906	G	A	G	Hoxd3_MA0912.1	12	1	+	7.659564509612636	8.627086740551666	GAGAGGTAATTAGCAT
chr17	57408604	57408605	chr17:57408605:G:C	rs4794729	G	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	57461323	57461324	chr17:57461324:C:T	rs76954717	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	57528791	57528792	chr17:57528792:T:C	rs76847271	T	C	T	Hoxd3_MA0912.1	4	1	-	9.295105327765514	9.899342056277886	AAGAAGTAATTAATTT
chr17	57550085	57550086	chr17:57550086:C:T	chr17:57550086:C:T	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr17	57550132	57550133	chr17:57550133:G:A	rs75825980	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	57605231	57605232	chr17:57605232:A:T	rs79180392	A	T	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr17	57623594	57623595	chr17:57623595:T:G	rs7342828	T	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr17	57688112	57688113	chr17:57688113:A:G	rs11079324	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr17	57762999	57763000	chr17:57763000:G:A	rs12449630	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	57804531	57804532	chr17:57804532:T:G	rs2586054	T	G	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr17	57804543	57804544	chr17:57804544:G:C	rs2685519	G	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr17	58314357	58314358	chr17:58314358:G:A	rs2526382	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	58314357	58314358	chr17:58314358:G:T	chr17:58314358:G:T	G	T	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	58379735	58379736	chr17:58379736:C:G	rs757484	C	G	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr17	59291908	59291909	chr17:59291909:C:G	rs2599298	C	G	G	Hoxd3_MA0912.1	2	1	-	8.789466515437958	7.00599209774401	ATGGGGCAATTACAGG
chr17	59399873	59399874	chr17:59399874:T:G	rs1451508	T	G	G	Hoxd3_MA0912.1	6	1	+	9.362387553067357	2.6177513836550297	TTGGGGTAATTGGAGT
chr17	59490251	59490252	chr17:59490252:T:A	rs7208723	T	A	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr17	59785230	59785231	chr17:59785231:T:C	rs2645469	T	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr17	59808347	59808348	chr17:59808348:C:T	rs7212590	C	T	C	Hoxd3_MA0912.1	0	1	+	8.587119923247599	8.63962542062553	CTGGGATAATGAATGC
chr17	60173574	60173575	chr17:60173575:C:T	rs16944117	C	T	-	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr17	60193733	60193734	chr17:60193734:T:C	rs7216167	T	C	-	Hoxd3_MA0912.1	18	0	-	0	0	.
chr17	60390716	60390717	chr17:60390717:G:A	rs73322612	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	60432276	60432277	chr17:60432277:G:A	rs9895398	G	A	g	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	60554340	60554341	chr17:60554341:T:C	rs931564	T	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	60598613	60598614	chr17:60598614:T:C	chr17:60598614:T:C	T	C	T	Hoxd3_MA0912.1	7	1	-	8.791458113933162	2.0117748713027335	CTGCTTCAATTACTCT
chr17	60638871	60638872	chr17:60638872:C:A	rs57238632	C	A	-	Hoxd3_MA0912.1	29	0	-	0	0	.
chr17	61225623	61225624	chr17:61225624:A:G	rs72832587	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr17	61357280	61357281	chr17:61357281:A:T	rs117377302	A	T	A	Hoxd3_MA0912.1	0	1	-	10.049380212521015	9.332946080582278	TTTAATTAATTAATTT
chr17	61428007	61428008	chr17:61428008:T:C	rs4968561	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr17	62131346	62131347	chr17:62131347:G:A	rs12947777	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr17	62339765	62339766	chr17:62339766:T:C	rs4316817	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr17	62717712	62717713	chr17:62717713:T:G	rs4968736	T	G	T	Hoxd3_MA0912.1	9	1	+	6.294415130729519	1.8037379439625256	CAGCGCTCATGACCCT
chr17	62989691	62989692	chr17:62989692:T:G	chr17:62989692:T:G	T	G	.	Hoxd3_MA0912.1	3	1	+	7.029214088724977	7.479452783818246	CTGTGGTCATTGATGG
chr17	63269345	63269346	chr17:63269346:A:G	rs9895708	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	63279932	63279933	chr17:63279933:G:C	rs138786406	G	C	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	63379855	63379856	chr17:63379856:G:C	rs8065950	G	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr17	64094063	64094064	chr17:64094064:C:T	rs62073080	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr17	64145717	64145718	chr17:64145718:G:A	rs372370501	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	64145739	64145740	chr17:64145740:T:C	rs572681248	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr17	64145754	64145755	chr17:64145755:T:C	rs564829667	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr17	64230946	64230947	chr17:64230947:T:C	rs117646490	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	64309850	64309851	chr17:64309851:A:G	rs1867625	A	G	G	Hoxd3_MA0912.1	1	1	+	9.93921167562581	9.081387402251618	CATAGTTAATTACTCT
chr17	64329333	64329334	chr17:64329334:A:T	rs2070784	A	T	T	Hoxd3_MA0912.1	4	1	-	7.289380471038616	7.289380471038616	CGATTCTAATTACCCC
chr17	65058302	65058303	chr17:65058303:A:C	rs79408343	A	C	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr17	65185822	65185823	chr17:65185823:G:T	rs16960903	G	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	65371635	65371636	chr17:65371636:C:T	chr17:65371636:C:T	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	65464330	65464331	chr17:65464331:A:G	rs9905716	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr17	65679340	65679341	chr17:65679341:T:A	rs232102	T	A	A	Hoxd3_MA0912.1	9	1	+	9.204150972376707	4.713473785609715	ATTTTGTAATTAAACT
chr17	65692686	65692687	chr17:65692687:A:G	rs12952646	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	66087003	66087004	chr17:66087004:T:C	rs9903521	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	66171822	66171823	chr17:66171823:T:C	rs36014358	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr17	66191432	66191433	chr17:66191433:A:C	rs114540983	A	C	A	Hoxd3_MA0912.1	5	1	-	10.711550093201339	10.582754984995768	CTGAGTTAATTATTTT
chr17	66191433	66191434	chr17:66191434:C:T	rs116775297	C	T	C	Hoxd3_MA0912.1	4	1	-	10.711550093201339	10.107313364688965	CTGAGTTAATTATTTT
chr17	66193376	66193377	chr17:66193377:C:T	rs72837176	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr17	66246646	66246647	chr17:66246647:C:G	rs62073346	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr17	66246683	66246684	chr17:66246684:C:T	rs1450208547	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr17	66335838	66335839	chr17:66335839:A:G	rs12450534	A	G	G	Hoxd3_MA0912.1	1	1	-	8.917747221406858	6.833686733870726	CTGAAGTAATTATCTA
chr17	66422150	66422151	chr17:66422151:T:C	rs7221968	T	C	T	Hoxd3_MA0912.1	0	1	-	8.565715802906443	7.245268007584139	ATGAGGTCATTAAGGT
chr17	66567213	66567214	chr17:66567214:T:C	rs375603582	T	C	T	Hoxd3_MA0912.1	10	1	+	9.675743226282787	2.8960599836523597	ATAAGGTAATTAATTT
chr17	66584819	66584820	chr17:66584820:T:C	rs2361490	T	C	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr17	66584884	66584885	chr17:66584885:G:A	rs28869578	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	66633216	66633217	chr17:66633217:A:G	rs145239293	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	66721753	66721754	chr17:66721754:C:T	rs7226221	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr17	66738415	66738416	chr17:66738416:T:G	rs7215445	T	G	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	66960282	66960283	chr17:66960283:A:G	rs66579141	A	G	G	Hoxd3_MA0912.1	14	1	+	7.205350454395245	8.149315784159377	CTGGGCTCATTAAGAC
chr17	67173918	67173919	chr17:67173919:A:G	rs9891840	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	67221250	67221251	chr17:67221251:T:C	rs28522034	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr17	67391029	67391030	chr17:67391030:T:G	rs184714666	T	G	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	67391031	67391032	chr17:67391032:G:C	rs62084081	G	C	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr17	67410713	67410714	chr17:67410714:G:T	rs111821862	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr17	67410740	67410741	chr17:67410741:A:G	rs73338112	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr17	67496531	67496532	chr17:67496532:C:T	rs35901199	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	67499606	67499607	chr17:67499607:C:T	rs11870107	C	T	c	Hoxd3_MA0912.1	12	1	+	9.16526582350554	7.958513903500679	CAGAGGCAATTACAGT
chr17	67517046	67517047	chr17:67517047:C:T	rs4791285	C	T	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr17	67531776	67531777	chr17:67531777:G:A	rs73334024	G	A	G	Hoxd3_MA0912.1	1	1	+	6.670733016207445	7.528557289581638	CGGTGGTAATGACCCA
chr17	67747956	67747957	chr17:67747957:G:A	rs11655147	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	67747961	67747962	chr17:67747962:A:G	rs544285118	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr17	68019744	68019745	chr17:68019745:T:C	rs6504572	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	68054607	68054608	chr17:68054608:C:T	rs139584626	C	T	c	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	68125781	68125782	chr17:68125782:C:T	rs147265891	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	68456324	68456325	chr17:68456325:T:G	rs533050285	T	G	T	Hoxd3_MA0912.1	8	1	-	7.723171325625251	3.232494138858259	GTGGTGTAATTAAGGC
chr17	68513238	68513239	chr17:68513239:G:A	rs72847782	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr17	68522521	68522522	chr17:68522522:A:G	rs2952275	A	G	G	Hoxd3_MA0912.1	11	1	+	8.51097052787254	6.725044579691549	TTGTACTAATGACTTT
chr17	68582308	68582309	chr17:68582309:C:T	chr17:68582309:C:T	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr17	68665581	68665582	chr17:68665582:A:C	rs34691892	A	C	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr17	69473736	69473737	chr17:69473737:T:C	rs9895446	T	C	T	Hoxd3_MA0912.1	8	1	-	8.25548214506503	1.3669096854996687	CTGGATCAATTATCAT
chr17	69486211	69486212	chr17:69486212:G:A	rs8077944	G	A	A	Hoxd3_MA0912.1	0	1	-	7.7366716409230705	7.789177138301001	CGAGTCTAATTACAGT
chr17	70040786	70040787	chr17:70040787:T:G	rs180169	T	G	T	Hoxd3_MA0912.1	1	1	+	11.70167854829381	9.617618060757678	TTGAGCTAATTAACAT
chr17	70071116	70071117	chr17:70071117:T:C	rs2108437	T	C	T	Hoxd3_MA0912.1	9	1	+	10.016186171817486	3.127613712252123	TTGATGCAATTACTCT
chr17	70138476	70138477	chr17:70138477:T:C	rs17702078	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	70181623	70181624	chr17:70181624:C:A	rs4328485	C	A	A	Hoxd3_MA0912.1	15	1	+	9.930239720928812	9.04293652592791	TTGAGATAATTAAGCC
chr17	70199903	70199904	chr17:70199904:T:C	rs1514239	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	70335869	70335870	chr17:70335870:T:C	rs312682	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr17	70522007	70522008	chr17:70522008:T:A	rs79504236	T	A	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	71155056	71155057	chr17:71155057:T:G	rs2058086	T	G	t	Hoxd3_MA0912.1	7	1	-	9.037350054550792	7.063407688370275	CTGATCCAATTACCTC
chr17	71172151	71172152	chr17:71172152:C:T	rs4793534	C	T	C	Hoxd3_MA0912.1	10	1	-	8.195877505041969	3.3901366285920593	TTGTGCTAATGAGCAT
chr17	71182763	71182764	chr17:71182764:A:C	rs16976443	A	C	A	Hoxd3_MA0912.1	1	1	-	8.4749015199729	6.39084103243677	CTGTGCCAATTAACAG
chr17	71188810	71188811	chr17:71188811:A:G	rs9891648	A	G	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	71199099	71199100	chr17:71199100:A:G	rs11870732	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr17	71464540	71464541	chr17:71464541:C:A	rs7219759	C	A	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	71680027	71680028	chr17:71680028:A:C	rs2430514	A	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	71826554	71826555	chr17:71826555:G:A	rs8073181	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	71986884	71986885	chr17:71986885:T:C	rs9889701	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	72283505	72283506	chr17:72283506:G:T	rs62069766	G	T	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr17	72359245	72359246	chr17:72359246:T:C	rs8065637	T	C	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr17	72378827	72378828	chr17:72378828:G:A	rs11652147	G	A	T	Hoxd3_MA0912.1	1	1	-	7.193094512243064	9.277154999779192	CCGTGCTAATGAACGC
chr17	72515466	72515467	chr17:72515467:G:A	rs147783122	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	72515480	72515481	chr17:72515481:G:C	rs115161381	G	C	G	Hoxd3_MA0912.1	12	1	-	7.635385672978018	6.667863442038987	ATAGGCCAATTACCAT
chr17	72743071	72743072	chr17:72743072:C:T	rs4793308	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr17	72757346	72757347	chr17:72757347:T:C	rs76692316	T	C	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	72814136	72814137	chr17:72814137:T:G	rs4793313	T	G	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	73014312	73014313	chr17:73014313:G:A	rs74684972	G	A	G	Hoxd3_MA0912.1	12	1	-	9.140981556969662	7.934229636964798	ATGGGTTAATTGCACC
chr17	73070696	73070697	chr17:73070697:G:T	rs111867318	G	T	G	Hoxd3_MA0912.1	13	1	-	10.476668810057388	9.872432081545014	ATGATTTAATTACCTC
chr17	73262706	73262707	chr17:73262707:C:G	rs7217509	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr17	73404189	73404190	chr17:73404190:C:T	rs7405603	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr17	73703203	73703204	chr17:73703204:G:T	rs2661598	G	T	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr17	73709753	73709754	chr17:73709754:T:G	rs11869245	T	G	T	Hoxd3_MA0912.1	4	1	-	7.699225191935566	6.725384009734858	CTGGAGTCATTGCTGT
chr17	73812782	73812783	chr17:73812783:A:G	rs72844266	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr17	73979449	73979450	chr17:73979450:G:T	rs7225228	G	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr17	73982981	73982982	chr17:73982982:A:G	rs73353471	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr17	74031261	74031262	chr17:74031262:T:C	rs1531237	T	C	t	Hoxd3_MA0912.1	2	1	+	8.768696867822268	8.302413019679065	CATGGGTAATTAGCTT
chr17	74032289	74032290	chr17:74032290:T:G	rs11077720	T	G	T	Hoxd3_MA0912.1	1	1	+	9.270048537188257	7.185988049652128	CTTACCTAATTAATCT
chr17	74194911	74194912	chr17:74194912:G:C	rs78176099	G	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr17	74197046	74197047	chr17:74197047:A:T	rs79807021	A	T	A	Hoxd3_MA0912.1	15	1	-	7.725639173715411	6.0606314101265	CTGGGGAAATTAAAGT
chr17	74295036	74295037	chr17:74295037:T:G	rs4375697	T	G	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr17	74317379	74317380	chr17:74317380:G:A	rs4239010	G	A	a	Hoxd3_MA0912.1	10	1	+	7.976498248572436	3.1707573721225284	CTGACTTAATGAATGC
chr17	74386777	74386778	chr17:74386778:C:A	rs16978020	C	A	C	Hoxd3_MA0912.1	5	1	-	9.321514586214917	9.450309694420486	CTGGGGTAATTAAGAG
chr17	74391471	74391472	chr17:74391472:T:C	rs72852264	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr17	74431447	74431448	chr17:74431448:C:G	rs3803789	C	G	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	74542565	74542566	chr17:74542566:A:C	rs7215318	A	C	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr17	74838445	74838446	chr17:74838446:A:G	rs3803783	A	G	G	Hoxd3_MA0912.1	10	1	-	10.286851147706367	3.5071679050759386	ATGATTTAATTAGCTT
chr17	75345034	75345035	chr17:75345035:T:A	rs9911119	T	A	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	75395063	75395064	chr17:75395064:A:G	rs4788891	A	G	G	Hoxd3_MA0912.1	13	1	+	8.299906390113241	7.326065207912534	CTTGGATAATTACAAC
chr17	75548857	75548858	chr17:75548858:A:G	rs59138015	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr17	75747825	75747826	chr17:75747826:C:G	chr17:75747826:C:G	C	G	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr17	75935705	75935706	chr17:75935706:G:A	rs59867239	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr17	75951978	75951979	chr17:75951979:C:T	rs542679521	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr17	76049142	76049143	chr17:76049143:C:A	rs2598434	C	A	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr17	76257911	76257912	chr17:76257912:C:G	rs35200132	C	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr17	76375853	76375854	chr17:76375854:G:A	rs1047435552	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr17	76568087	76568088	chr17:76568088:C:G	rs143837533	C	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr17	76598041	76598042	chr17:76598042:A:T	rs4238998	A	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	76810910	76810911	chr17:76810911:C:T	rs62086010	C	T	c	Hoxd3_MA0912.1	4	1	-	9.074017230611	8.469780502098626	AAGTGTTAATTAATGC
chr17	76944157	76944158	chr17:76944158:C:T	rs138614144	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr17	76969842	76969843	chr17:76969843:C:T	rs736743	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	77037632	77037633	chr17:77037633:G:A	rs73996873	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr17	77049837	77049838	chr17:77049838:G:A	rs78565192	G	A	G	Hoxd3_MA0912.1	13	1	-	8.100821074867008	7.496584346354636	TGGAATTAATTGCCTT
chr17	77262686	77262687	chr17:77262687:C:T	rs59969143	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr17	77321093	77321094	chr17:77321094:C:G	rs73371416	C	G	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr17	77321132	77321133	chr17:77321133:G:A	rs577143273	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr17	77355151	77355152	chr17:77355152:G:A	rs28633701	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr17	77460417	77460418	chr17:77460418:G:A	rs312842	G	A	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr17	77534207	77534208	chr17:77534208:A:G	rs28752157	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr17	77617655	77617656	chr17:77617656:C:T	rs4789474	C	T	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr17	77620603	77620604	chr17:77620604:C:T	rs9911541	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	77699268	77699269	chr17:77699269:G:A	rs9891526	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	77706717	77706718	chr17:77706718:T:C	rs9914269	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	77706750	77706751	chr17:77706751:T:C	rs112012775	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	77716843	77716844	chr17:77716844:C:A	rs10852786	C	A	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr17	77768336	77768337	chr17:77768337:T:C	rs7207468	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr17	77865943	77865944	chr17:77865944:A:G	rs62078491	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr17	77935068	77935069	chr17:77935069:A:C	rs76510087	A	C	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr17	77951306	77951307	chr17:77951307:C:T	rs139242524	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr17	78111982	78111983	chr17:78111983:T:C	rs373642802	T	C	-	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	78227583	78227584	chr17:78227584:C:T	rs113792002	C	T	C	Hoxd3_MA0912.1	0	1	+	9.120350510395989	9.17285600777392	CTGAGTTAATGAATTG
chr17	78776205	78776206	chr17:78776206:C:T	rs7224711	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr17	78778675	78778676	chr17:78778676:A:C	rs78550738	A	C	A	Hoxd3_MA0912.1	10	1	-	9.24690514153804	7.272962775357522	CAGGCCTAATTAAACT
chr17	78804943	78804944	chr17:78804944:A:C	rs74763131	A	C	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr17	78804971	78804972	chr17:78804972:C:T	rs115969510	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr17	78916789	78916790	chr17:78916790:G:A	rs118080492	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr17	78971265	78971266	chr17:78971266:A:G	rs117771294	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr17	79186778	79186779	chr17:79186779:G:C	rs981645	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	79299691	79299692	chr17:79299692:T:C	rs8082640	T	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr17	79511471	79511472	chr17:79511472:G:A	rs36046803	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	79571070	79571071	chr17:79571071:T:C	rs879164264	T	C	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	79571076	79571077	chr17:79571077:G:A	rs879163714	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr17	79596566	79596567	chr17:79596567:G:T	rs9906644	G	T	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	79647524	79647525	chr17:79647525:T:C	rs929952126	T	C	t	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr17	79865595	79865596	chr17:79865596:T:C	rs73414705	T	C	T	Hoxd3_MA0912.1	0	1	-	9.003010026313353	7.682562230991049	ATGAGATAATTGCAGT
chr17	79915137	79915138	chr17:79915138:C:T	rs62076597	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr17	79977731	79977732	chr17:79977732:T:G	rs925943160	T	G	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr17	80047237	80047238	chr17:80047238:A:G	rs7207441	A	G	A	Hoxd3_MA0912.1	8	1	+	7.0257989918689825	0.13722653230362003	CAGTGGCAATTAAGCC
chr17	80063928	80063929	chr17:80063929:T:C	rs34865586	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	80132585	80132586	chr17:80132586:C:G	rs4889827	C	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr17	80241766	80241767	chr17:80241767:T:G	rs12942462	T	G	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr17	80439628	80439629	chr17:80439629:A:G	rs4318264	A	G	G	Hoxd3_MA0912.1	15	1	-	8.689666938006031	7.911962369418023	CTCGCCTAATTACACT
chr17	80649356	80649357	chr17:80649357:G:A	rs116721051	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr17	80649990	80649991	chr17:80649991:T:C	rs117865905	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr17	80650016	80650017	chr17:80650017:G:T	rs761476092	G	T	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr17	80650874	80650875	chr17:80650875:T:C	rs763500288	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr17	80650901	80650902	chr17:80650902:T:C	rs62069681	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr17	80743603	80743604	chr17:80743604:A:C	rs3764371	A	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr17	80743653	80743654	chr17:80743654:G:T	rs3764370	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr17	80877405	80877406	chr17:80877406:T:C	rs67726311	T	C	C	Hoxd3_MA0912.1	6	1	+	8.390983309634901	6.605057361453909	CTGGCATAATGACCGT
chr17	81310333	81310334	chr17:81310334:G:T	rs56207672	G	T	G	Hoxd3_MA0912.1	5	1	+	9.201565178685312	9.330360286890881	CCGGGGTAATTAAAGC
chr17	81343924	81343925	chr17:81343925:G:A	rs111866441	G	A	G	Hoxd3_MA0912.1	4	1	+	9.145008412915157	8.540771684402785	CAGGGATAATTAGAGT
chr17	81343953	81343954	chr17:81343954:C:T	rs80147643	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr17	81664010	81664011	chr17:81664011:C:T	rs57304625	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr17	81664043	81664044	chr17:81664044:C:T	rs72858833	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr17	81682273	81682274	chr17:81682274:A:G	rs3205137	A	G	.	Hoxd3_MA0912.1	29	0	+	0	0	.
chr17	82159601	82159602	chr17:82159602:C:A	rs8078102	C	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr17	82159613	82159614	chr17:82159614:G:A	rs8081949	G	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr17	82282201	82282202	chr17:82282202:A:G	rs114749710	A	G	A	Hoxd3_MA0912.1	4	1	-	10.049380212521015	9.075539030320305	TTTATTTAATTAATTT
chr17	82292844	82292845	chr17:82292845:T:C	rs114232047	T	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr17	82332479	82332480	chr17:82332480:T:C	rs114808956	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr17	82396585	82396586	chr17:82396586:A:G	rs9915129	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr17	82494543	82494544	chr17:82494544:C:T	rs188560465	C	T	C	Hoxd3_MA0912.1	0	1	-	6.9112112506808145	8.231659046003118	GTGGGCTCATTGCCCT
chr17	82555292	82555293	chr17:82555293:A:G	rs72861086	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr17	82713170	82713171	chr17:82713171:G:A	rs28405190	G	A	g	Hoxd3_MA0912.1	20	0	+	0	0	.
chr17	82780457	82780458	chr17:82780458:C:A	rs74000079	C	A	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr17	82881338	82881339	chr17:82881339:A:G	rs8072584	A	G	A	Hoxd3_MA0912.1	1	1	-	9.031421018527535	6.9473605309914035	TTGGTTTAATTACTAA
chr17	82943159	82943160	chr17:82943160:C:G	rs8180	C	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr17	82971185	82971186	chr17:82971186:C:A	rs565569581	C	A	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr17	82971200	82971201	chr17:82971201:G:A	rs80140302	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr17	83185957	83185958	chr17:83185958:T:A	rs12939623	T	A	g	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	83185957	83185958	chr17:83185958:T:G	chr17:83185958:T:G	T	G	g	Hoxd3_MA0912.1	28	0	-	0	0	.
chr17	83185979	83185980	chr17:83185980:A:G	rs12940383	A	G	G	Hoxd3_MA0912.1	6	1	-	7.79654372942618	6.0106177812451875	CCTAGCTAATTAGACT
chr18	312643	312644	chr18:312644:C:T	rs541092	C	T	C	Hoxd3_MA0912.1	2	1	-	8.846422238753776	7.396587194596738	TGGATTTAATTACTGG
chr18	384796	384797	chr18:384797:G:T	rs7244310	G	T	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr18	406802	406803	chr18:406803:G:A	rs56228140	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr18	425645	425646	chr18:425646:C:G	rs72863546	C	G	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr18	425648	425649	chr18:425649:G:A	rs62088038	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr18	471808	471809	chr18:471809:G:A	rs1954816	G	A	A	Hoxd3_MA0912.1	12	1	-	10.111142452516633	8.90439053251177	TTGGACTAATTACTTG
chr18	672791	672792	chr18:672792:C:T	rs1059394	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr18	830953	830954	chr18:830954:A:G	rs9966574	A	G	A	Hoxd3_MA0912.1	9	1	-	9.331523077404244	2.442950617838882	TTGAGATAATTGAATT
chr18	832276	832277	chr18:832277:G:A	rs144088749	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr18	1053492	1053493	chr18:1053493:T:C	rs789030	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr18	1161054	1161055	chr18:1161055:T:A	rs10853206	T	A	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr18	1173426	1173427	chr18:1173427:C:T	rs11663038	C	T	C	Hoxd3_MA0912.1	13	1	-	9.52676589987431	10.500607082075017	CTGTGATAATTACGTT
chr18	1194109	1194110	chr18:1194110:A:G	rs56799851	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr18	1224799	1224800	chr18:1224800:C:G	rs77923652	C	G	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr18	1708332	1708333	chr18:1708333:A:G	rs4797053	A	G	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr18	1826436	1826437	chr18:1826437:T:G	rs893657	T	G	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr18	2138780	2138781	chr18:2138781:T:C	rs78043978	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr18	2504945	2504946	chr18:2504946:G:A	rs7228325	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr18	3048643	3048644	chr18:3048644:C:A	rs4798060	C	A	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr18	3055900	3055901	chr18:3055901:G:A	rs118045097	G	A	g	Hoxd3_MA0912.1	24	0	-	0	0	.
chr18	3114299	3114300	chr18:3114300:A:T	rs75059949	A	T	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr18	3187424	3187425	chr18:3187425:A:G	rs9953200	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr18	3187439	3187440	chr18:3187440:G:T	rs78760271	G	T	T	Hoxd3_MA0912.1	2	1	+	8.372030988058636	7.054840418507893	TTGGTGTAATGAATTC
chr18	3251035	3251036	chr18:3251036:C:T	rs2053567	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr18	3305739	3305740	chr18:3305740:C:T	rs9964709	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr18	3332668	3332669	chr18:3332669:A:G	rs16944710	A	G	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr18	3395545	3395546	chr18:3395546:T:C	chr18:3395546:T:C	T	C	T	Hoxd3_MA0912.1	10	1	+	9.280431012464877	2.50074776983445	ATGATTTCATTAACTT
chr18	3447962	3447963	chr18:3447963:A:G	rs80144693	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr18	3466305	3466306	chr18:3466306:C:G	rs17647488	C	G	C	Hoxd3_MA0912.1	0	1	+	8.31329659343878	6.328920163555671	CTGAAATAATGAACTC
chr18	3618234	3618235	chr18:3618235:A:G	rs181677315	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr18	3653873	3653874	chr18:3653874:A:C	rs117841850	A	C	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr18	3693621	3693622	chr18:3693622:T:G	rs4798113	T	G	T	Hoxd3_MA0912.1	7	1	-	10.523244671081866	8.549302304901346	CTGAGTCAATTACCCC
chr18	4051342	4051343	chr18:4051343:A:G	rs72871111	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr18	4429022	4429023	chr18:4429023:C:T	rs34483032	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr18	5215100	5215101	chr18:5215101:A:G	rs7239500	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr18	5419138	5419139	chr18:5419139:C:A	rs2280568	C	A	A	Hoxd3_MA0912.1	2	1	-	9.956964862023531	8.639774292472786	TTGAATTCATTAAACT
chr18	6598843	6598844	chr18:6598844:C:G	rs34134966	C	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr18	6734692	6734693	chr18:6734693:C:T	rs11874464	C	T	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr18	6747553	6747554	chr18:6747554:A:G	rs6506438	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr18	8125266	8125267	chr18:8125267:A:G	rs117906621	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr18	8142370	8142371	chr18:8142371:T:G	rs775490768	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr18	8224865	8224866	chr18:8224866:T:C	rs9958585	T	C	T	Hoxd3_MA0912.1	8	1	-	9.367276711435048	2.4787042518696856	TTGAATCAATTAATCC
chr18	8478170	8478171	chr18:8478171:C:T	rs4798647	C	T	T	Hoxd3_MA0912.1	1	1	+	8.826819012350958	10.91087949988709	CCGATTTAATTAGACT
chr18	8700783	8700784	chr18:8700784:G:C	rs1861951	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr18	8700785	8700786	chr18:8700786:G:A	rs12326848	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr18	8764934	8764935	chr18:8764935:T:C	rs74452591	T	C	T	Hoxd3_MA0912.1	10	1	+	7.845642140650584	1.0659588980201564	CAGGTGCAATTACTCC
chr18	8943268	8943269	chr18:8943269:C:T	rs7236914	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr18	9404720	9404721	chr18:9404721:G:A	rs61067716	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr18	9404747	9404748	chr18:9404748:C:G	rs12963151	C	G	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr18	9438608	9438609	chr18:9438609:T:C	rs8089473	T	C	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr18	9629967	9629968	chr18:9629968:A:G	rs28444237	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr18	9798296	9798297	chr18:9798297:G:T	rs142866844	G	T	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr18	9835798	9835799	chr18:9835799:A:G	rs11662690	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr18	9971776	9971777	chr18:9971777:G:T	rs29180	G	T	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr18	9971792	9971793	chr18:9971793:A:C	rs29073	A	C	A	Hoxd3_MA0912.1	11	1	+	10.477474354349505	3.7328381849371772	TTAGGCTAATTACAGT
chr18	10148694	10148695	chr18:10148695:T:C	rs146127622	T	C	T	Hoxd3_MA0912.1	0	1	+	8.227939304633557	8.175433807255626	TTCTGTTAATTGCCCC
chr18	10148724	10148725	chr18:10148725:G:C	rs1893211	G	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr18	10290337	10290338	chr18:10290338:G:T	rs111501232	G	T	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr18	10400392	10400393	chr18:10400393:G:T	rs400441	G	T	G	Hoxd3_MA0912.1	14	1	+	7.570142653624687	7.182221572776843	TTGGGGCAATTGAGGT
chr18	10428780	10428781	chr18:10428781:T:C	rs72977416	T	C	T	Hoxd3_MA0912.1	8	1	-	9.562882076753574	2.6743096171882113	TAGAGTCAATTACCTT
chr18	10686132	10686133	chr18:10686133:T:C	rs9807618	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr18	10749039	10749040	chr18:10749040:G:T	rs17488092	G	T	G	Hoxd3_MA0912.1	5	1	-	8.420286285134411	7.884249242021925	CTGTGCTCATTATTCT
chr18	10806036	10806037	chr18:10806037:G:A	rs183082560	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr18	10806048	10806049	chr18:10806049:G:A	rs187420980	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr18	10890669	10890670	chr18:10890670:A:G	rs264223	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr18	11051081	11051082	chr18:11051082:G:A	rs8095703	G	A	G	Hoxd3_MA0912.1	5	1	+	8.274942459658906	7.550379082865581	CTGGGGTCATTATCTG
chr18	11219713	11219714	chr18:11219714:G:A	rs11663747	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr18	11291204	11291205	chr18:11291205:T:C	rs7244675	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr18	11408713	11408714	chr18:11408714:A:G	rs9303724	A	G	G	Hoxd3_MA0912.1	10	1	-	7.418596334974538	0.6389130923441106	CTGGGCCAATTGCCCA
chr18	11516138	11516139	chr18:11516139:G:A	rs12454562	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr18	11673408	11673409	chr18:11673409:G:C	rs11663404	G	C	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr18	11788062	11788063	chr18:11788063:T:C	rs12606210	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	11969057	11969058	chr18:11969058:C:T	rs117004964	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr18	11969093	11969094	chr18:11969094:G:A	rs111283819	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr18	12811745	12811746	chr18:12811746:T:C	rs2847290	T	C	C	Hoxd3_MA0912.1	10	1	+	7.642306633386001	0.8626233907555725	CTCAGGTCATTAATGC
chr18	13504040	13504041	chr18:13504041:C:T	rs1648598	C	T	T	Hoxd3_MA0912.1	13	1	+	8.96759612903631	8.363359400523938	TTAGCATAATTACCGT
chr18	13504056	13504057	chr18:13504057:C:G	rs1648597	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr18	13518160	13518161	chr18:13518161:T:C	rs12458741	T	C	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr18	13551999	13552000	chr18:13552000:T:C	rs57181699	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr18	13562008	13562009	chr18:13562009:T:C	rs1290369	T	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr18	13849837	13849838	chr18:13849838:G:A	rs34639440	G	A	A	Hoxd3_MA0912.1	4	1	+	8.591884568602794	7.98764784009042	GTGTGTTAATTACATC
chr18	13886875	13886876	chr18:13886876:G:A	rs28926172	G	A	G	Hoxd3_MA0912.1	2	1	+	8.85299144922286	7.40315640506582	AGGAACTAATTACCTT
chr18	21484966	21484967	chr18:21484967:A:G	rs75764218	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr18	22106659	22106660	chr18:22106660:G:A	rs76265129	G	A	G	Hoxd3_MA0912.1	12	1	-	7.7536310369261585	6.5468791169212945	ATGAGGCAATGACAGT
chr18	22277133	22277134	chr18:22277134:A:G	rs74971219	A	G	A	Hoxd3_MA0912.1	7	1	+	9.345683114100332	2.565999871469904	CTTGGCTAATTAATTG
chr18	22311361	22311362	chr18:22311362:A:G	rs11081875	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr18	22322575	22322576	chr18:22322576:T:C	chr18:22322576:T:C	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr18	22345932	22345933	chr18:22345933:G:A	rs2385480	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr18	22477310	22477311	chr18:22477311:T:A	rs563969	T	A	A	Hoxd3_MA0912.1	9	1	+	7.144037200348332	2.653360013581339	TTGGGGTCATTGCATG
chr18	22934417	22934418	chr18:22934418:G:A	rs542232383	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr18	23116336	23116337	chr18:23116337:C:T	rs56394522	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr18	23232765	23232766	chr18:23232766:G:A	rs768271557	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr18	23573977	23573978	chr18:23573978:G:T	rs7226548	G	T	G	Hoxd3_MA0912.1	4	1	+	9.85083046647178	9.246593737959406	TTAGGTTAATTAATAT
chr18	23922094	23922095	chr18:23922095:C:T	rs12969459	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	23922099	23922100	chr18:23922100:G:A	rs3786412	G	A	G	Hoxd3_MA0912.1	2	1	+	11.038057730980865	9.588222686823826	ATGAATTAATTAATGT
chr18	24538219	24538220	chr18:24538220:C:A	rs1791275	C	A	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr18	24660553	24660554	chr18:24660554:G:T	rs76482713	G	T	G	Hoxd3_MA0912.1	2	1	+	9.745524884893841	8.428334315343097	ATGATGTAATTAACAG
chr18	24660570	24660571	chr18:24660571:C:T	rs138564095	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	24673265	24673266	chr18:24673266:G:A	rs75551307	G	A	G	Hoxd3_MA0912.1	0	1	-	9.616232098489002	9.668737595866933	CTGTGTTAATTGCCAT
chr18	24726802	24726803	chr18:24726803:G:A	rs1680347	G	A	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr18	24842998	24842999	chr18:24842999:C:G	rs9951029	C	G	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr18	24869205	24869206	chr18:24869206:C:T	rs572870705	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr18	24869210	24869211	chr18:24869211:A:G	rs2122791	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr18	24957773	24957774	chr18:24957774:T:C	rs8085573	T	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	25168755	25168756	chr18:25168756:G:A	rs45579137	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr18	25854162	25854163	chr18:25854163:C:T	rs1786739	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr18	25866282	25866283	chr18:25866283:C:T	rs17261044	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr18	25900960	25900961	chr18:25900961:T:G	rs1785750	T	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr18	26092397	26092398	chr18:26092398:G:C	rs7239196	G	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr18	26513443	26513444	chr18:26513444:A:G	rs7233161	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr18	26513464	26513465	chr18:26513465:G:C	rs12454640	G	C	G	Hoxd3_MA0912.1	2	1	+	7.59270126960406	5.809226851910111	TTGCCCCAATTACCTT
chr18	26654618	26654619	chr18:26654619:T:C	rs1370904	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr18	26675127	26675128	chr18:26675128:G:C	rs4800758	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr18	26981644	26981645	chr18:26981645:T:C	chr18:26981645:T:C	T	C	T	Hoxd3_MA0912.1	0	1	+	7.510780280304456	7.458274782926525	TGTGGGTAATTATCCC
chr18	27250563	27250564	chr18:27250564:T:G	rs16943395	T	G	G	Hoxd3_MA0912.1	7	1	-	8.275838011336976	6.301895645156458	TTAGTGTAATTGCAGT
chr18	27565806	27565807	chr18:27565807:G:A	rs636545	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr18	27797529	27797530	chr18:27797530:A:T	rs7237557	A	T	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr18	27797548	27797549	chr18:27797549:T:C	rs8096576	T	C	T	Hoxd3_MA0912.1	8	1	-	8.951163894618642	2.0625914350532786	ATGGATTAATTGGCCT
chr18	28146758	28146759	chr18:28146759:G:A	rs11083252	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr18	28667840	28667841	chr18:28667841:C:T	rs3907528	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr18	28909220	28909221	chr18:28909221:G:A	rs145301617	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr18	28994896	28994897	chr18:28994897:C:A	rs4800900	C	A	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr18	29761833	29761834	chr18:29761834:T:C	rs73951079	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr18	30418595	30418596	chr18:30418596:A:G	rs116640523	A	G	-	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr18	30538574	30538575	chr18:30538575:A:G	rs1838024	A	G	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr18	30608963	30608964	chr18:30608964:G:A	rs1478539	G	A	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	30679944	30679945	chr18:30679945:T:C	rs55654868	T	C	C	Hoxd3_MA0912.1	15	1	+	10.39272959987105	9.615025031283041	TTGTATTAATTAAGCT
chr18	30945095	30945096	chr18:30945096:T:C	rs1865515	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr18	31174678	31174679	chr18:31174679:G:A	rs11081681	G	A	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	31207391	31207392	chr18:31207392:T:A	rs1365295	T	A	A	Hoxd3_MA0912.1	6	1	+	7.967907804848044	3.630216743754001	CTTTCCTAATTACCTC
chr18	31233603	31233604	chr18:31233604:C:T	rs6506901	C	T	T	Hoxd3_MA0912.1	4	1	-	8.096196671219174	7.491959942706799	TTCTGGTAATTGCAGT
chr18	31233624	31233625	chr18:31233625:T:G	rs7244015	T	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr18	31247742	31247743	chr18:31247743:T:C	rs8089598	T	C	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr18	32207936	32207937	chr18:32207937:C:A	rs4799639	C	A	A	Hoxd3_MA0912.1	7	1	+	8.718123432863745	10.692065799044263	CAGAATTCATTACCTT
chr18	32592025	32592026	chr18:32592026:C:A	rs75115776	C	A	C	Hoxd3_MA0912.1	12	1	+	8.264999688653589	8.264999688653589	CTTGGTCAATTACAGG
chr18	32596538	32596539	chr18:32596539:G:C	rs330281	G	C	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr18	32613164	32613165	chr18:32613165:A:G	rs141077951	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr18	33035021	33035022	chr18:33035022:C:T	rs8093250	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr18	33099680	33099681	chr18:33099681:G:T	rs271484	G	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr18	33577667	33577668	chr18:33577668:C:T	rs9957304	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr18	33821767	33821768	chr18:33821768:G:A	rs8098328	G	A	G	Hoxd3_MA0912.1	14	1	+	9.317893800116638	8.373928470352505	CTTGTGTAATTACAGG
chr18	34353034	34353035	chr18:34353035:A:G	rs77165039	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr18	34396625	34396626	chr18:34396626:C:T	rs17554649	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	34593431	34593432	chr18:34593432:A:C	rs148813783	A	C	A	Hoxd3_MA0912.1	14	1	+	9.00411844636314	10.124499141411722	CTGTTGTAATTACCAA
chr18	34976670	34976671	chr18:34976671:G:T	rs188353314	G	T	G	Hoxd3_MA0912.1	12	1	-	9.109916446693399	9.109916446693399	GTGAATTAATTACCTG
chr18	34979385	34979386	chr18:34979386:G:T	rs544007080	G	T	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr18	34979389	34979390	chr18:34979390:A:G	rs118055314	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr18	35174317	35174318	chr18:35174318:G:C	rs73424532	G	C	g	Hoxd3_MA0912.1	5	1	+	10.287263137125729	10.098736803444892	AAGAGGTAATTAAAGT
chr18	35332069	35332070	chr18:35332070:T:G	rs12964490	T	G	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr18	35876463	35876464	chr18:35876464:T:C	rs4799823	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr18	36821842	36821843	chr18:36821843:G:A	rs72885226	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr18	36821843	36821844	chr18:36821844:T:C	rs917571896	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr18	37358192	37358193	chr18:37358193:G:A	rs7226391	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr18	37404161	37404162	chr18:37404162:C:A	rs11660785	C	A	C	Hoxd3_MA0912.1	2	1	-	9.260767907715024	7.94357733816428	TAGGGTTAATGAACTT
chr18	37525313	37525314	chr18:37525314:C:G	rs71365665	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr18	37924033	37924034	chr18:37924034:T:C	rs7241017	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr18	38447011	38447012	chr18:38447012:C:T	rs10502691	C	T	C	Hoxd3_MA0912.1	12	1	+	8.989185308051281	7.782433388046418	TTGGCATAATTACAGG
chr18	38552389	38552390	chr18:38552390:C:A	rs77715818	C	A	C	Hoxd3_MA0912.1	12	1	-	8.453438115112256	8.214208426046422	CTGGCATAATTAGCAT
chr18	39485900	39485901	chr18:39485901:C:G	rs1681039	C	G	G	Hoxd3_MA0912.1	15	1	-	9.65102441508297	9.697328983124656	TTGAGATAATTATTCG
chr18	39513271	39513272	chr18:39513272:T:C	rs1788932	T	C	C	Hoxd3_MA0912.1	10	1	+	7.531958281196174	0.7522750385657475	TTGGTGTCATTGCCGG
chr18	39773897	39773898	chr18:39773898:C:T	rs12971137	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr18	39942344	39942345	chr18:39942345:T:C	rs8091001	T	C	T	Hoxd3_MA0912.1	13	1	+	8.317505186031521	8.921741914543896	TTTGGTTAATTGATGG
chr18	39990724	39990725	chr18:39990725:A:C	rs79009099	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr18	40415290	40415291	chr18:40415291:A:C	rs1865279	A	C	C	Hoxd3_MA0912.1	9	1	-	8.534956913110499	4.044279726343507	CTGAAATCATTACCAT
chr18	40469462	40469463	chr18:40469463:T:A	rs203188	T	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr18	40652692	40652693	chr18:40652693:G:A	rs2437945	G	A	g	Hoxd3_MA0912.1	18	0	+	0	0	.
chr18	41911907	41911908	chr18:41911908:A:G	rs9948753	A	G	G	Hoxd3_MA0912.1	3	1	+	8.344503556342723	8.230405805303699	TTGAAGTAATGAGCAT
chr18	42155758	42155759	chr18:42155759:C:T	rs11875642	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr18	42311249	42311250	chr18:42311250:G:A	rs72901378	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr18	42569780	42569781	chr18:42569781:T:C	rs4525577	T	C	C	Hoxd3_MA0912.1	8	1	-	7.660833003224655	0.7722605436592949	CTGAGGTAATGAGGCC
chr18	42586896	42586897	chr18:42586897:T:G	rs7229368	T	G	G	Hoxd3_MA0912.1	5	1	+	11.414763261667844	11.285968153462273	TTGAGTTAATTACTAT
chr18	42586897	42586898	chr18:42586898:T:G	rs79001050	T	G	T	Hoxd3_MA0912.1	6	1	+	11.414763261667844	4.6701270922555125	TTGAGTTAATTACTAT
chr18	42596507	42596508	chr18:42596508:C:T	rs181417508	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr18	42596510	42596511	chr18:42596511:C:T	rs149951614	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr18	43160938	43160939	chr18:43160939:G:A	rs72898662	G	A	G	Hoxd3_MA0912.1	13	1	-	10.346829305797417	9.742592577285043	CTGAGTCAATTAACGC
chr18	43756683	43756684	chr18:43756684:A:T	rs74485029	A	T	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr18	43794680	43794681	chr18:43794681:G:A	rs9952707	G	A	A	Hoxd3_MA0912.1	12	1	+	8.919224792108972	9.886747023048002	TGGTGTTAATTAGTCT
chr18	44548789	44548790	chr18:44548790:A:G	rs4988714	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr18	44723160	44723161	chr18:44723161:C:G	rs186566478	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr18	44814415	44814416	chr18:44814416:A:T	rs8088688	A	T	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr18	44859920	44859921	chr18:44859921:C:T	rs991014	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr18	45127481	45127482	chr18:45127482:C:G	rs7230236	C	G	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr18	45152928	45152929	chr18:45152929:C:T	rs4890279	C	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr18	45152961	45152962	chr18:45152962:T:G	rs4890530	T	G	T	Hoxd3_MA0912.1	14	1	+	9.451849725685195	9.839770806533037	TTGAAGTAATTGATTT
chr18	45232161	45232162	chr18:45232162:G:A	rs13381225	G	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr18	45541630	45541631	chr18:45541631:C:A	rs16978400	C	A	A	Hoxd3_MA0912.1	5	1	+	8.349951522398207	7.813914479285721	CTGAGCTAATGACTGA
chr18	45554409	45554410	chr18:45554410:C:T	rs16978404	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	45656765	45656766	chr18:45656766:C:T	rs2035532	C	T	C	Hoxd3_MA0912.1	13	1	+	10.631472387768612	10.027235659256238	TTATGCTAATTAACGT
chr18	45666341	45666342	chr18:45666342:T:C	rs187057153	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr18	45666363	45666364	chr18:45666364:G:T	rs2170972	G	T	G	Hoxd3_MA0912.1	1	1	-	7.9219719997705536	8.779796273144743	CCCAGGTAATTACATT
chr18	45712131	45712132	chr18:45712132:T:C	rs7244359	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr18	45834039	45834040	chr18:45834040:A:G	chr18:45834040:A:G	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr18	46408668	46408669	chr18:46408669:A:G	rs9951417	A	G	a	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	46416045	46416046	chr18:46416046:A:G	rs35897092	A	G	a	Hoxd3_MA0912.1	1	1	+	8.99164851616417	8.133824242789979	CATGGCTAATTAACAT
chr18	46662281	46662282	chr18:46662282:A:G	rs1017780	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr18	46857409	46857410	chr18:46857410:T:C	rs72909108	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr18	47317986	47317987	chr18:47317987:C:A	rs7230902	C	A	A	Hoxd3_MA0912.1	2	1	-	7.5112087739360405	6.194018204385296	CTGGTGTCATGACTGT
chr18	47629129	47629130	chr18:47629130:G:A	rs10502885	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr18	48048513	48048514	chr18:48048514:G:T	rs74953370	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr18	48293347	48293348	chr18:48293348:C:G	rs117233027	C	G	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr18	48304983	48304984	chr18:48304984:C:G	rs4940351	C	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr18	48364093	48364094	chr18:48364094:T:C	rs17752282	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr18	48575478	48575479	chr18:48575479:T:C	rs998722	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr18	48873065	48873066	chr18:48873066:T:G	rs72915695	T	G	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr18	49017359	49017360	chr18:49017360:C:G	rs357889	C	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr18	49457790	49457791	chr18:49457791:T:C	rs12457921	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr18	49488108	49488109	chr18:49488109:C:T	rs12606545	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	49682772	49682773	chr18:49682773:C:T	rs11660468	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr18	49754939	49754940	chr18:49754940:A:C	rs8089586	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr18	49907374	49907375	chr18:49907375:G:C	rs55754534	G	C	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr18	50140252	50140253	chr18:50140253:A:C	rs12607904	A	C	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr18	50143042	50143043	chr18:50143043:G:T	rs74586859	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr18	50274050	50274051	chr18:50274051:A:T	rs140689	A	T	a	Hoxd3_MA0912.1	1	1	-	7.901503697844769	6.675267483682829	TTGGCTTAATGAGTCT
chr18	50309258	50309259	chr18:50309259:G:C	rs9675965	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr18	50380835	50380836	chr18:50380836:T:C	rs7230337	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr18	50552346	50552347	chr18:50552347:G:A	rs28693960	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr18	50558189	50558190	chr18:50558190:G:A	rs16952149	G	A	G	Hoxd3_MA0912.1	13	1	-	7.042697406024271	6.438460677511896	CAGTGCCCATTACCGT
chr18	50799586	50799587	chr18:50799587:C:T	rs56387261	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr18	51084329	51084330	chr18:51084330:G:C	rs200482328	G	C	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr18	51142235	51142236	chr18:51142236:T:C	rs9945344	T	C	T	Hoxd3_MA0912.1	11	1	-	10.6967125111575	8.910786562976506	CTGAGTCAATTAAACT
chr18	51378122	51378123	chr18:51378123:C:T	rs73451644	C	T	C	Hoxd3_MA0912.1	15	1	-	8.670490938302823	7.829492311343607	AAGAACTAATTAAAGG
chr18	51462077	51462078	chr18:51462078:C:T	rs7233656	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr18	51603751	51603752	chr18:51603752:C:T	rs6508077	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr18	51610450	51610451	chr18:51610451:T:G	rs73444904	T	G	g	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr18	51947153	51947154	chr18:51947154:C:T	rs1480920	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr18	52227706	52227707	chr18:52227707:T:C	rs1373762	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr18	52344969	52344970	chr18:52344970:G:C	rs1025910	G	C	G	Hoxd3_MA0912.1	0	1	-	8.510773888258317	6.52639745837521	CTTATGTAATTAGAGC
chr18	52444512	52444513	chr18:52444513:C:T	rs12959526	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr18	52717292	52717293	chr18:52717293:C:T	rs7234380	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr18	52723511	52723512	chr18:52723512:C:A	rs4641847	C	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr18	52782694	52782695	chr18:52782695:C:T	rs1821121	C	T	C	Hoxd3_MA0912.1	0	1	+	8.192452083425108	8.244957580803039	CTGGATCAATTGCTCT
chr18	52887223	52887224	chr18:52887224:C:G	rs1431740	C	G	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr18	53010233	53010234	chr18:53010234:A:G	rs9951405	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr18	53144592	53144593	chr18:53144593:C:G	rs58142657	C	G	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr18	54238281	54238282	chr18:54238282:G:A	rs76876634	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr18	55107052	55107053	chr18:55107053:T:C	rs59494865	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr18	55186466	55186467	chr18:55186467:A:T	rs8089113	A	T	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr18	55244470	55244471	chr18:55244471:T:C	rs13381800	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr18	55955071	55955072	chr18:55955072:G:A	rs9949355	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr18	56082478	56082479	chr18:56082479:G:A	rs9961862	G	A	G	Hoxd3_MA0912.1	14	1	+	8.821222505555752	7.87725717579162	ATGGTGTCATTAATGT
chr18	56113186	56113187	chr18:56113187:G:T	rs17090083	G	T	G	Hoxd3_MA0912.1	5	1	+	7.202586998561724	7.331382106767295	CTTGGGTCATTGCCTT
chr18	56130698	56130699	chr18:56130699:T:A	rs72926493	T	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	56508514	56508515	chr18:56508515:C:T	rs950698	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr18	56889889	56889890	chr18:56889890:T:C	rs116971931	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr18	56911250	56911251	chr18:56911251:C:T	rs10048404	C	T	c	Hoxd3_MA0912.1	23	0	+	0	0	.
chr18	56988204	56988205	chr18:56988205:G:T	rs138480482	G	T	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr18	56988248	56988249	chr18:56988249:A:G	rs35961860	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr18	57087382	57087383	chr18:57087383:G:C	rs2096951	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr18	57428251	57428252	chr18:57428252:G:A	rs72627241	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr18	57434683	57434684	chr18:57434684:G:A	rs3760615	G	A	G	Hoxd3_MA0912.1	13	1	-	9.211226270454045	8.60698954194167	ATCATTTAATTACCCG
chr18	57753057	57753058	chr18:57753058:A:G	rs12606644	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr18	57992650	57992651	chr18:57992651:T:C	rs72947371	T	C	T	Hoxd3_MA0912.1	6	1	+	9.00007099932722	7.214145051146225	CTGTCTTAATTAACAG
chr18	58041193	58041194	chr18:58041194:C:T	rs7243190	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr18	58156741	58156742	chr18:58156742:G:A	rs1562029	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr18	58800945	58800946	chr18:58800946:G:A	rs34173487	G	A	G	Hoxd3_MA0912.1	6	1	-	9.144556778108914	10.930482726289908	TTGATTCAATTACAGG
chr18	59270256	59270257	chr18:59270257:G:A	rs1517034	G	A	A	Hoxd3_MA0912.1	14	1	+	10.437301293368858	9.493335963604725	TTTATTTAATTAATGT
chr18	59324019	59324020	chr18:59324020:T:G	rs74665946	T	G	T	Hoxd3_MA0912.1	0	1	-	7.39344183895097	8.057370473511776	ATGGGTTCATGAGCCT
chr18	59402339	59402340	chr18:59402340:T:G	rs148803879	T	G	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr18	59478494	59478495	chr18:59478495:T:G	rs655528	T	G	G	Hoxd3_MA0912.1	11	1	-	8.94822002903567	2.2035838596233406	CAGAGCTAATTATCTG
chr18	59512219	59512220	chr18:59512220:T:C	rs9961829	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr18	59512249	59512250	chr18:59512250:C:G	rs9947548	C	G	G	Hoxd3_MA0912.1	13	1	+	7.517304196135132	5.93922628542205	AGGGTCTAATTGACCT
chr18	59547666	59547667	chr18:59547667:A:G	rs73963231	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	59549908	59549909	chr18:59549909:C:T	rs60078767	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr18	59666257	59666258	chr18:59666258:T:C	chr18:59666258:T:C	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr18	59701281	59701282	chr18:59701282:A:C	rs9955197	A	C	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr18	59701289	59701290	chr18:59701290:A:G	rs12456299	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr18	59721665	59721666	chr18:59721666:A:C	rs1612762	A	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr18	59738250	59738251	chr18:59738251:A:G	rs1943428	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr18	59823398	59823399	chr18:59823399:G:A	rs76378425	G	A	G	Hoxd3_MA0912.1	14	1	+	7.607084267696155	6.663118937932021	TGGTGCCAATTACTGT
chr18	59823403	59823404	chr18:59823404:T:C	rs73961420	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	59823850	59823851	chr18:59823851:G:A	rs80227942	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr18	60053104	60053105	chr18:60053105:A:G	rs1573399	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr18	60645706	60645707	chr18:60645707:C:G	rs2000833	C	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr18	60650321	60650322	chr18:60650322:C:A	rs12971228	C	A	A	Hoxd3_MA0912.1	13	1	+	8.763554457838545	8.15931772932617	TTGACATAATTAACAG
chr18	61557098	61557099	chr18:61557099:A:C	rs73455327	A	C	A	Hoxd3_MA0912.1	12	1	+	9.420670224470832	9.420670224470832	ATGAAGTAATTAAACA
chr18	61668916	61668917	chr18:61668917:A:G	rs12454473	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr18	61908717	61908718	chr18:61908718:C:T	rs4940539	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr18	62411283	62411284	chr18:62411284:G:A	rs3017350	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr18	62444223	62444224	chr18:62444224:T:G	rs12458600	T	G	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr18	62495557	62495558	chr18:62495558:T:C	rs4941139	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr18	63216546	63216547	chr18:63216547:G:C	rs76509090	G	C	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr18	63438648	63438649	chr18:63438649:G:A	rs7241573	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr18	63511603	63511604	chr18:63511604:A:T	rs117335715	A	T	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	63882511	63882512	chr18:63882512:C:T	rs148361426	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr18	64042716	64042717	chr18:64042717:A:G	rs6567410	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr18	64135243	64135244	chr18:64135244:T:C	rs9950644	T	C	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr18	64440057	64440058	chr18:64440058:C:T	rs2959481	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr18	64592407	64592408	chr18:64592408:C:T	rs4353556	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr18	64592472	64592473	chr18:64592473:T:C	rs7504495	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr18	64620171	64620172	chr18:64620172:A:C	rs4941290	A	C	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr18	64877139	64877140	chr18:64877140:G:T	rs8091855	G	T	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr18	65522218	65522219	chr18:65522219:C:T	rs8086560	C	T	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr18	65522235	65522236	chr18:65522236:G:C	rs2166029	G	C	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr18	65725659	65725660	chr18:65725660:C:A	rs17781554	C	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	65725676	65725677	chr18:65725677:G:T	rs111415027	G	T	G	Hoxd3_MA0912.1	14	1	+	7.564126758197025	7.1762056773491825	CTGACCTAATTGACGA
chr18	65725677	65725678	chr18:65725678:A:T	rs9965921	A	T	A	Hoxd3_MA0912.1	15	1	+	7.564126758197025	9.229134521785936	CTGACCTAATTGACGA
chr18	65938713	65938714	chr18:65938714:T:A	rs2541854	T	A	a	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr18	65938729	65938730	chr18:65938730:T:C	rs2541855	T	C	c	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	66347339	66347340	chr18:66347340:C:G	rs115949257	C	G	C	Hoxd3_MA0912.1	0	1	+	8.348901647331262	6.364525217448152	CTCTGTCAATTAATCT
chr18	67074791	67074792	chr18:67074792:T:G	rs112650874	T	G	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr18	67081015	67081016	chr18:67081016:A:G	rs11876636	A	G	A	Hoxd3_MA0912.1	9	1	-	9.552945623576768	2.6643731640114057	TTTAGTTAATTAAACA
chr18	67104694	67104695	chr18:67104695:A:G	rs4592762	A	G	A	Hoxd3_MA0912.1	8	1	+	9.472927827482605	2.5843553679172433	CACAGTTAATTAATCT
chr18	67509779	67509780	chr18:67509780:G:A	rs138785264	G	A	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr18	67805576	67805577	chr18:67805577:G:A	rs8085641	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr18	67825157	67825158	chr18:67825158:T:C	rs12456077	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr18	68034226	68034227	chr18:68034227:T:C	rs4383254	T	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr18	68417656	68417657	chr18:68417657:T:C	rs7237404	T	C	T	Hoxd3_MA0912.1	0	1	+	9.577845870467131	9.5253403730892	TTGGTCTAATTAGTGC
chr18	68565121	68565122	chr18:68565122:G:A	rs9956240	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr18	68565164	68565165	chr18:68565165:C:T	rs9956064	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	68856184	68856185	chr18:68856185:G:A	rs12965973	G	A	G	Hoxd3_MA0912.1	14	1	+	9.722163894509576	8.778198564745443	TTGCAGTAATTATCGT
chr18	69251083	69251084	chr18:69251084:G:A	rs60361755	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	69290180	69290181	chr18:69290181:C:T	rs604987	C	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr18	69494895	69494896	chr18:69494896:A:G	rs189264897	A	G	a	Hoxd3_MA0912.1	0	1	+	6.849717748902736	5.529269953580433	ATGGGCTCATTGCACC
chr18	69606036	69606037	chr18:69606037:C:T	rs12964681	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr18	69659515	69659516	chr18:69659516:G:A	rs80123295	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr18	69866157	69866158	chr18:69866158:C:T	rs58180206	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr18	69866163	69866164	chr18:69866164:C:T	rs1790932	C	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr18	70302336	70302337	chr18:70302337:A:G	rs967607	A	G	G	Hoxd3_MA0912.1	11	1	+	7.895629423527964	6.109703475346972	CAGGGGTAATGAGAGT
chr18	70332650	70332651	chr18:70332651:A:C	rs9966549	A	C	A	Hoxd3_MA0912.1	7	1	+	9.130412608729184	7.156470242548664	AGGATTTAATTACACT
chr18	70469987	70469988	chr18:70469988:T:C	rs76839160	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	70490825	70490826	chr18:70490826:C:T	rs76528133	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr18	71730580	71730581	chr18:71730581:A:C	rs8090024	A	C	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr18	71850305	71850306	chr18:71850306:C:T	rs2685440	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr18	72632889	72632890	chr18:72632890:C:A	rs12964986	C	A	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr18	72895705	72895706	chr18:72895706:A:G	rs9954651	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr18	72943031	72943032	chr18:72943032:T:G	rs61396923	T	G	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr18	72973754	72973755	chr18:72973755:T:C	rs9951922	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr18	73402240	73402241	chr18:73402241:T:G	rs75387732	T	G	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr18	73679862	73679863	chr18:73679863:C:T	rs10871727	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr18	73835938	73835939	chr18:73835939:G:A	rs62101688	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr18	73841942	73841943	chr18:73841943:T:C	rs2043122	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	73931735	73931736	chr18:73931736:A:G	rs67130681	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr18	74567101	74567102	chr18:74567102:A:C	rs4891562	A	C	G	Hoxd3_MA0912.1	8	1	+	8.690742861876394	4.200065675109403	ATGATTCAATTACCTC
chr18	74635873	74635874	chr18:74635874:T:A	rs76653520	T	A	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr18	74742996	74742997	chr18:74742997:G:A	rs521221	G	A	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr18	74856218	74856219	chr18:74856219:A:G	rs77237104	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr18	75074161	75074162	chr18:75074162:C:T	rs11877023	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr18	75156801	75156802	chr18:75156802:G:T	rs762651689	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr18	75175242	75175243	chr18:75175243:T:C	rs2439261	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr18	75175247	75175248	chr18:75175248:C:T	rs189944487	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr18	75495115	75495116	chr18:75495116:C:A	rs12326205	C	A	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr18	75622695	75622696	chr18:75622696:G:A	rs7239403	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr18	76102784	76102785	chr18:76102785:G:A	rs4891008	G	A	G	Hoxd3_MA0912.1	12	1	-	8.130134469179685	6.923382549174821	CTGAATCAATTGCTGT
chr18	76102814	76102815	chr18:76102815:G:A	rs1653156	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr18	76136420	76136421	chr18:76136421:T:G	rs17058969	T	G	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr18	76354732	76354733	chr18:76354733:G:A	rs12964333	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr18	76440661	76440662	chr18:76440662:G:A	rs690392	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr18	76473526	76473527	chr18:76473527:T:C	rs9946711	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr18	76687241	76687242	chr18:76687242:T:C	rs55649411	T	C	T	Hoxd3_MA0912.1	10	1	+	8.523917787553282	1.7442345449228536	ATGGTTTCATTATCCT
chr18	76693152	76693153	chr18:76693153:A:G	rs12956056	A	G	A	Hoxd3_MA0912.1	8	1	+	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr18	77055882	77055883	chr18:77055883:T:C	rs11151000	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr18	77116234	77116235	chr18:77116235:G:A	rs36036469	G	A	a	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr18	77223988	77223989	chr18:77223989:A:C	rs72981142	A	C	A	Hoxd3_MA0912.1	4	1	-	8.497729791812738	9.101966520325112	TTGTTGCAATTACAGC
chr18	77413724	77413725	chr18:77413725:T:C	rs1942594	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr18	77858015	77858016	chr18:77858016:A:G	rs9957034	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr18	78125320	78125321	chr18:78125321:G:C	rs8091825	G	C	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr18	78141054	78141055	chr18:78141055:C:T	rs8088204	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr18	78141055	78141056	chr18:78141056:G:A	rs7236470	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr18	78578241	78578242	chr18:78578242:G:T	rs77886019	G	T	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr18	78578282	78578283	chr18:78578283:T:C	rs2005117	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr18	78598482	78598483	chr18:78598483:G:A	rs73972264	G	A	G	Hoxd3_MA0912.1	13	1	-	5.9212208124692625	5.316984083956888	CTGGGCCCATGACCGG
chr18	78626172	78626173	chr18:78626173:T:C	rs2354258	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr18	78755881	78755882	chr18:78755882:C:G	rs113086735	C	G	-	Hoxd3_MA0912.1	19	0	+	0	0	.
chr18	78755918	78755919	chr18:78755919:G:A	rs112878622	G	A	-	Hoxd3_MA0912.1	4	1	+	7.06853824782889	6.464301519316516	CAGCGGTCATTACCTG
chr18	78770317	78770318	chr18:78770318:C:T	rs116588489	C	T	C	Hoxd3_MA0912.1	12	1	+	7.294391623673481	6.087639703668617	CAGCTGTAATTACGGC
chr18	79201873	79201874	chr18:79201874:A:T	rs866512229	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr18	79201880	79201881	chr18:79201881:T:A	rs7233555	T	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr18	79201881	79201882	chr18:79201882:T:A	rs183106980	T	A	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr18	79517477	79517478	chr18:79517478:G:A	rs71366535	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr18	79576280	79576281	chr18:79576281:C:T	rs115433276	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr18	79611302	79611303	chr18:79611303:T:A	rs566564	T	A	A	Hoxd3_MA0912.1	7	1	-	9.339609805256549	2.559926562626121	CTGTGCTAATTAGCAC
chr18	79611849	79611850	chr18:79611850:G:A	rs143056820	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr18	79848940	79848941	chr18:79848941:C:A	rs7236023	C	A	C	Hoxd3_MA0912.1	12	1	+	7.2967260146619335	7.2967260146619335	AGGGGTTAATGACCGC
chr18	79868718	79868719	chr18:79868719:T:C	rs35201860	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr18	79913430	79913431	chr18:79913431:G:A	rs145116028	G	A	g	Hoxd3_MA0912.1	25	0	-	0	0	.
chr18	80055504	80055505	chr18:80055505:A:G	rs4416085	A	G	A	Hoxd3_MA0912.1	0	1	-	7.794715688134324	7.742210190756393	TTGTGGCAATTAGCAC
chr18	80124183	80124184	chr18:80124184:T:C	rs7407865	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr19	89308	89309	chr19:89309:A:G	rs113661763	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	382772	382773	chr19:382773:T:G	rs75071006	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr19	382775	382776	chr19:382776:C:T	rs73489992	C	T	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr19	511403	511404	chr19:511404:C:T	rs982122273	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr19	511452	511453	chr19:511453:A:G	rs3745924	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr19	707586	707587	chr19:707587:C:T	rs187739282	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr19	960597	960598	chr19:960598:G:A	rs968016225	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr19	995520	995521	chr19:995521:G:A	rs72971646	G	A	G	Hoxd3_MA0912.1	15	1	-	7.785034781116225	8.562739349704232	CTGCGGTCATTACCAC
chr19	1132346	1132347	chr19:1132347:G:A	rs61612228	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr19	1291818	1291819	chr19:1291819:T:G	rs11879503	T	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	1302683	1302684	chr19:1302684:G:A	rs192193317	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr19	1361579	1361580	chr19:1361580:A:G	rs1259794682	A	G	A	Hoxd3_MA0912.1	3	1	-	9.031356393190537	8.294675170610864	ATGTGGTAATTAAGAT
chr19	1943449	1943450	chr19:1943450:T:A	rs4806821	T	A	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	2096637	2096638	chr19:2096638:C:A	rs140487484	C	A	C	Hoxd3_MA0912.1	14	1	-	5.6589985353755194	5.271077454527676	CTGTGCCAATGGCCGG
chr19	2185996	2185997	chr19:2185997:C:T	rs144005263	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	2185999	2186000	chr19:2186000:A:T	chr19:2186000:A:T	A	T	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr19	2238667	2238668	chr19:2238668:G:T	rs7253181	G	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	2267198	2267199	chr19:2267199:C:G	rs2854109	C	G	N	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	2326215	2326216	chr19:2326216:C:T	rs2270048	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr19	2494246	2494247	chr19:2494247:C:T	rs11084942	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr19	2550988	2550989	chr19:2550989:C:T	rs79151403	C	T	c	Hoxd3_MA0912.1	18	0	+	0	0	.
chr19	2550993	2550994	chr19:2550994:T:C	rs939841560	T	C	t	Hoxd3_MA0912.1	23	0	+	0	0	.
chr19	2550999	2551000	chr19:2551000:C:T	rs77079009	C	T	c	Hoxd3_MA0912.1	29	0	+	0	0	.
chr19	2613849	2613850	chr19:2613850:A:T	rs8102356	A	T	T	Hoxd3_MA0912.1	12	1	+	10.490056148064134	9.28330422805927	CTGATTTAATTAATTG
chr19	2923478	2923479	chr19:2923479:C:T	rs4807365	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr19	2968158	2968159	chr19:2968159:G:A	rs12972823	G	A	g	Hoxd3_MA0912.1	17	0	-	0	0	.
chr19	3047259	3047260	chr19:3047260:C:T	rs113955961	C	T	-	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr19	3311408	3311409	chr19:3311409:C:G	rs555351604	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr19	3348270	3348271	chr19:3348271:T:C	rs11085013	T	C	T	Hoxd3_MA0912.1	10	1	+	8.669139867157009	1.889456624526581	ATGGGATAATTGCCGG
chr19	3358122	3358123	chr19:3358123:A:C	rs73520291	A	C	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr19	3450956	3450957	chr19:3450957:A:G	rs146482723	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	3470863	3470864	chr19:3470864:T:G	rs4807476	T	G	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr19	3505863	3505864	chr19:3505864:C:A	chr19:3505864:C:A	C	A	C	Hoxd3_MA0912.1	0	1	+	6.124984432790169	5.461055798229363	CTGCGCTCATTAGGCG
chr19	3783256	3783257	chr19:3783257:G:A	rs192061751	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr19	3958709	3958710	chr19:3958710:G:C	rs10419272	G	C	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr19	4389793	4389794	chr19:4389794:C:T	rs12327771	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr19	4593702	4593703	chr19:4593703:A:G	rs111487472	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr19	4691623	4691624	chr19:4691624:T:G	rs116782156	T	G	t	Hoxd3_MA0912.1	1	1	+	5.579604299663106	3.4955438121269755	CTGGGCCCATGACCTC
chr19	4759994	4759995	chr19:4759995:C:T	rs151136505	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr19	5288170	5288171	chr19:5288171:A:C	rs740058	A	C	A	Hoxd3_MA0912.1	9	1	-	8.386808757996732	3.8961315712297404	CTGATCTAATTGCATG
chr19	5288863	5288864	chr19:5288864:C:T	rs17676218	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr19	5386955	5386956	chr19:5386956:G:A	rs67568348	G	A	g	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr19	5386971	5386972	chr19:5386972:G:A	rs66482878	G	A	a	Hoxd3_MA0912.1	2	1	+	7.461458919604901	6.011623875447862	CCGGCCTAATTAGCTT
chr19	5539577	5539578	chr19:5539578:G:T	rs193167897	G	T	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	5689245	5689246	chr19:5689246:C:T	rs67905503	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	6262046	6262047	chr19:6262047:G:A	rs35294934	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr19	6412623	6412624	chr19:6412624:C:G	rs151113169	C	G	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr19	6425256	6425257	chr19:6425257:A:T	rs138801511	A	T	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr19	6425270	6425271	chr19:6425271:T:C	rs8107519	T	C	T	Hoxd3_MA0912.1	8	1	-	8.279252443795391	1.3906799842300288	TTGGATTAATTGGCTG
chr19	6425270	6425271	chr19:6425271:T:G	chr19:6425271:T:G	T	G	T	Hoxd3_MA0912.1	8	1	-	8.279252443795391	3.7885752570283993	TTGGATTAATTGGCTG
chr19	6425278	6425279	chr19:6425279:A:G	rs117888937	A	G	A	Hoxd3_MA0912.1	0	1	-	8.279252443795391	8.22674694641746	TTGGATTAATTGGCTG
chr19	6461739	6461740	chr19:6461740:T:C	rs168348	T	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	6556831	6556832	chr19:6556832:C:T	rs193155060	C	T	C	Hoxd3_MA0912.1	15	1	+	7.132084423032213	7.909788991620221	ATGGTATCATTAGCCC
chr19	6641692	6641693	chr19:6641693:C:G	rs409662	C	G	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr19	6812794	6812795	chr19:6812795:A:G	rs2135788	A	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr19	6886455	6886456	chr19:6886456:C:T	rs75145365	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr19	6886456	6886457	chr19:6886457:G:C	rs537104585	G	C	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr19	7052784	7052785	chr19:7052785:G:C	rs10427101	G	C	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr19	7268426	7268427	chr19:7268427:G:A	rs7248939	G	A	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr19	7356329	7356330	chr19:7356330:G:A	rs1286830042	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr19	7434555	7434556	chr19:7434556:A:G	rs78290157	A	G	A	Hoxd3_MA0912.1	11	1	+	7.148787995704154	5.362862047523162	AGGCGCTAATTAGACT
chr19	7561388	7561389	chr19:7561389:C:G	rs45474094	C	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr19	7657591	7657592	chr19:7657592:C:T	rs573280866	C	T	C	Hoxd3_MA0912.1	13	1	+	5.566954691744146	4.962717963231773	CTGGGGTACTTGCCGG
chr19	7657602	7657603	chr19:7657603:G:T	rs75707945	G	T	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr19	7687280	7687281	chr19:7687281:T:C	rs66683559	T	C	C	Hoxd3_MA0912.1	13	1	-	7.7021727171443795	6.7283315349436705	CTGGGGTCATTGCACC
chr19	7745361	7745362	chr19:7745362:T:C	rs11465381	T	C	N	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	7800024	7800025	chr19:7800025:C:T	chr19:7800025:C:T	C	T	-	Hoxd3_MA0912.1	13	1	+	7.681230451526999	7.076993723014625	TTACCGTAATTAACGG
chr19	8421748	8421749	chr19:8421749:A:G	rs55654865	A	G	A	Hoxd3_MA0912.1	9	1	-	7.355241581373317	0.4666691218079539	CAAGGTTAATGAGCCT
chr19	8460755	8460756	chr19:8460756:G:T	rs76969035	G	T	G	Hoxd3_MA0912.1	14	1	+	10.547739942914738	10.159818862066896	TTGAATTAATTATTGT
chr19	9075710	9075711	chr19:9075711:G:A	rs28699225	G	A	G	Hoxd3_MA0912.1	13	1	-	8.418487294999826	7.814250566487452	TGCAGATAATTACCCT
chr19	9205548	9205549	chr19:9205549:A:G	rs75384888	A	G	a	Hoxd3_MA0912.1	18	0	+	0	0	.
chr19	9323005	9323006	chr19:9323006:C:T	rs10412913	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr19	9456356	9456357	chr19:9456357:C:T	rs2080918	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr19	9722116	9722117	chr19:9722117:T:C	chr19:9722117:T:C	T	C	T	Hoxd3_MA0912.1	10	1	+	9.619861367208244	2.8401781245778164	ATTAGCTAATTACATT
chr19	9878793	9878794	chr19:9878794:C:T	rs12610468	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr19	10421975	10421976	chr19:10421976:C:G	rs115702202	C	G	C	Hoxd3_MA0912.1	2	1	-	7.700939669313232	5.917465251619284	CTGTCACAATTACACT
chr19	10421975	10421976	chr19:10421976:C:T	chr19:10421976:C:T	C	T	C	Hoxd3_MA0912.1	2	1	-	7.700939669313232	6.251104625156193	CTGTCACAATTACACT
chr19	10421977	10421978	chr19:10421978:G:A	rs74806945	G	A	G	Hoxd3_MA0912.1	0	1	-	7.700939669313232	7.753445166691163	CTGTCACAATTACACT
chr19	10544080	10544081	chr19:10544081:C:T	rs10423349	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr19	10564657	10564658	chr19:10564658:T:C	rs12971428	T	C	C	Hoxd3_MA0912.1	3	1	-	8.300725737715329	8.186627986676305	TGGAGTTAATGACTGT
chr19	10594074	10594075	chr19:10594075:A:G	rs112828841	A	G	A	Hoxd3_MA0912.1	1	1	-	7.591503585297664	5.5074430977615325	TTGGGCTCATGAATTT
chr19	10594087	10594088	chr19:10594088:G:T	rs116323954	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr19	11710213	11710214	chr19:11710214:T:C	rs11085792	T	C	c	Hoxd3_MA0912.1	14	1	-	7.870664791460527	8.81463012122466	CTGTTCTAATTGCCAG
chr19	12283738	12283739	chr19:12283739:G:C	rs73004277	G	C	g	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr19	12835512	12835513	chr19:12835513:G:T	rs1002917514	G	T	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr19	12835513	12835514	chr19:12835514:C:A	rs10421122	C	A	c	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr19	12929832	12929833	chr19:12929833:G:A	rs2967890	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr19	13156367	13156368	chr19:13156368:G:A	rs151115955	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr19	13156370	13156371	chr19:13156371:G:T	rs892020	G	T	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr19	13163870	13163871	chr19:13163871:A:G	rs567193495	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr19	13347557	13347558	chr19:13347558:C:T	rs13382150	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr19	13434516	13434517	chr19:13434517:C:T	rs34088054	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr19	13460316	13460317	chr19:13460317:C:T	rs141862832	C	T	C	Hoxd3_MA0912.1	12	1	+	7.634186437772826	6.427434517767962	CTCAGGTAATTGCGGT
chr19	13602556	13602557	chr19:13602557:A:T	rs6511882	A	T	t	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr19	13602558	13602559	chr19:13602559:C:A	rs6511883	C	A	a	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr19	13662201	13662202	chr19:13662202:G:C	rs7258143	G	C	C	Hoxd3_MA0912.1	2	1	+	6.7483571825419855	4.9648827648480385	ATGAGGCCATTGCCCT
chr19	13768807	13768808	chr19:13768808:T:C	rs346152	T	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr19	14273923	14273924	chr19:14273924:T:C	rs498284	T	C	c	Hoxd3_MA0912.1	18	0	-	0	0	.
chr19	14493036	14493037	chr19:14493037:G:T	rs73001000	G	T	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr19	14655936	14655937	chr19:14655937:G:A	rs7255156	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr19	14746860	14746861	chr19:14746861:C:G	rs117913748	C	G	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr19	14748927	14748928	chr19:14748928:T:C	rs8112145	T	C	t	Hoxd3_MA0912.1	32	0	-	0	0	.
chr19	14906995	14906996	chr19:14906996:A:T	rs116313769	A	T	-	Hoxd3_MA0912.1	0	1	-	9.614939696883116	8.898505564944381	TTGTTTTAATTAGCTG
chr19	14972982	14972983	chr19:14972983:C:T	rs8103212	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr19	15233097	15233098	chr19:15233098:G:A	chr19:15233098:G:A	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr19	15233141	15233142	chr19:15233142:C:T	rs958695026	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr19	15610983	15610984	chr19:15610984:C:T	rs8106355	C	T	c	Hoxd3_MA0912.1	5	1	-	9.557299601888788	8.832736225095463	TTTAGGTAATTAGTTT
chr19	15631562	15631563	chr19:15631563:C:T	rs1022414	C	T	c	Hoxd3_MA0912.1	25	0	-	0	0	.
chr19	15724287	15724288	chr19:15724288:G:T	rs7252197	G	T	-	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	15828881	15828882	chr19:15828882:C:T	rs7259139	C	T	C	Hoxd3_MA0912.1	14	1	+	10.070421879313333	9.506085433181042	CTTAACTAATTAACCC
chr19	15835818	15835819	chr19:15835819:C:T	rs12982687	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr19	15835843	15835844	chr19:15835844:T:G	rs73927772	T	G	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr19	15913928	15913929	chr19:15913929:A:G	rs2072269	A	G	-	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr19	15913963	15913964	chr19:15913964:A:G	rs2072270	A	G	-	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	16021435	16021436	chr19:16021436:C:T	rs62116843	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr19	16162051	16162052	chr19:16162052:A:G	rs188167918	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr19	16316299	16316300	chr19:16316300:A:G	rs410867	A	G	a	Hoxd3_MA0912.1	29	0	-	0	0	.
chr19	16445410	16445411	chr19:16445411:G:C	rs79083128	G	C	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr19	16445431	16445432	chr19:16445432:T:C	rs192987877	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr19	16628983	16628984	chr19:16628984:C:T	rs1010018926	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr19	16660078	16660079	chr19:16660079:A:C	rs1340385191	A	C	A	Hoxd3_MA0912.1	10	1	-	7.566988764724	5.593046398543483	TTCGGGTAATTAGGGG
chr19	17850267	17850268	chr19:17850268:C:G	rs35563907	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr19	18257053	18257054	chr19:18257054:T:C	rs79268593	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr19	18386038	18386039	chr19:18386039:C:T	rs17526126	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr19	18513522	18513523	chr19:18513523:A:G	rs271628	A	G	-	Hoxd3_MA0912.1	19	0	-	0	0	.
chr19	18836586	18836587	chr19:18836587:C:T	rs11670952	C	T	t	Hoxd3_MA0912.1	13	1	+	6.876143658802114	6.27190693028974	TGGGGGTAATGGACGT
chr19	18993276	18993277	chr19:18993277:C:T	rs77733772	C	T	C	Hoxd3_MA0912.1	13	1	+	7.328139439951184	6.72390271143881	ACTTGGTAATTACCGG
chr19	19033223	19033224	chr19:19033224:T:C	rs546767934	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	19116122	19116123	chr19:19116123:G:A	rs117591960	G	A	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr19	19116124	19116125	chr19:19116125:T:A	rs183615544	T	A	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	19250342	19250343	chr19:19250343:C:G	rs55989964	C	G	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr19	19578381	19578382	chr19:19578382:C:T	rs117316432	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr19	19578421	19578422	chr19:19578422:A:G	rs10415813	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	19635404	19635405	chr19:19635405:C:G	rs2304129	C	G	C	Hoxd3_MA0912.1	2	1	-	8.213446611993833	6.429972194299886	CTGGGTTAATGACCAA
chr19	19764054	19764055	chr19:19764055:C:T	rs7247299	C	T	c	Hoxd3_MA0912.1	28	0	-	0	0	.
chr19	19902923	19902924	chr19:19902924:A:G	rs118117744	A	G	-	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr19	19977229	19977230	chr19:19977230:C:T	rs11672275	C	T	t	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr19	19977230	19977231	chr19:19977231:C:T	rs11672276	C	T	t	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr19	20292731	20292732	chr19:20292732:G:T	rs10410777	G	T	.	Hoxd3_MA0912.1	16	0	-	0	0	.
chr19	20372111	20372112	chr19:20372112:G:T	rs10410769	G	T	.	Hoxd3_MA0912.1	0	1	-	9.189415313358436	8.52548667879763	CTATGGTAATTAAGGT
chr19	20504635	20504636	chr19:20504636:G:C	rs10411882	G	C	.	Hoxd3_MA0912.1	17	0	-	0	0	.
chr19	20533804	20533805	chr19:20533805:G:A	rs7256690	G	A	.	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr19	21210291	21210292	chr19:21210292:A:G	rs7247871	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr19	21608860	21608861	chr19:21608861:C:G	rs1850937	C	G	.	Hoxd3_MA0912.1	14	1	+	7.674580966754366	7.498165601469919	TTCACCTAATTGCCCT
chr19	21836641	21836642	chr19:21836642:G:T	rs10407896	G	T	T	Hoxd3_MA0912.1	13	1	-	7.104940950059921	6.500704221547547	CTGCAGTCATGACCCT
chr19	21836660	21836661	chr19:21836661:T:G	rs374957214	T	G	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr19	21891734	21891735	chr19:21891735:C:G	rs1628324	C	G	N	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr19	22734033	22734034	chr19:22734034:T:C	rs2112609	T	C	.	Hoxd3_MA0912.1	6	1	+	7.6253065249750644	5.8393805767940705	CTGAAGTCATGACAGT
chr19	23748241	23748242	chr19:23748242:T:C	rs6511511	T	C	T	Hoxd3_MA0912.1	9	1	+	7.806123160520613	0.9175507009552508	AAGAGTTAATTGCAGG
chr19	24040211	24040212	chr19:24040212:T:C	rs11881036	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr19	24142762	24142763	chr19:24142763:G:C	rs12609544	G	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr19	27745974	27745975	chr19:27745975:T:C	rs1015284816	T	C	.	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr19	27902025	27902026	chr19:27902026:C:A	rs56273850	C	A	c	Hoxd3_MA0912.1	21	0	-	0	0	.
chr19	28010910	28010911	chr19:28010911:G:A	rs73025307	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	28126473	28126474	chr19:28126474:G:A	rs17714483	G	A	G	Hoxd3_MA0912.1	0	1	-	7.93424112756667	7.986746624944601	CTGATGTAATGAAAGA
chr19	28373237	28373238	chr19:28373238:T:C	rs7255848	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr19	28396340	28396341	chr19:28396341:T:A	rs56159843	T	A	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr19	28558900	28558901	chr19:28558901:C:T	rs2159129	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr19	28744795	28744796	chr19:28744796:T:C	rs12462620	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr19	28828689	28828690	chr19:28828690:T:C	rs56131999	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	28845756	28845757	chr19:28845757:C:T	rs4805278	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr19	28922727	28922728	chr19:28922728:C:T	rs35909958	C	T	C	Hoxd3_MA0912.1	14	1	-	6.713362790281629	5.769397460517495	TAGTCCTAATTGCCGC
chr19	28964682	28964683	chr19:28964683:A:G	rs4513216	A	G	G	Hoxd3_MA0912.1	7	1	+	8.638760559450548	1.8590773168201202	TTGTGTTAATGGACGT
chr19	29046053	29046054	chr19:29046054:C:T	rs60742431	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr19	29075854	29075855	chr19:29075855:A:T	rs7252330	A	T	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr19	29120469	29120470	chr19:29120470:C:T	rs11670202	C	T	C	Hoxd3_MA0912.1	14	1	-	6.907795008346652	5.963829678582519	CTGGCGTAATTGGAGG
chr19	29170677	29170678	chr19:29170678:C:A	rs55905172	C	A	C	Hoxd3_MA0912.1	14	1	+	8.538993978575501	7.41861328352692	GAGATGTAATTACACT
chr19	29240952	29240953	chr19:29240953:C:T	rs10426577	C	T	c	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr19	29436888	29436889	chr19:29436889:G:A	rs533338301	G	A	G	Hoxd3_MA0912.1	12	1	-	7.592583130316904	6.38583121031204	GTGCATTAATTACAGG
chr19	29739341	29739342	chr19:29739342:A:G	rs10425059	A	G	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr19	29798871	29798872	chr19:29798872:C:T	rs62104473	C	T	C	Hoxd3_MA0912.1	3	1	-	6.331461169073155	6.445558920112179	CTCGGCTCATTGCTGT
chr19	29856161	29856162	chr19:29856162:T:C	rs11084240	T	C	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr19	30079095	30079096	chr19:30079096:C:A	chr19:30079096:C:A	C	A	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr19	30113417	30113418	chr19:30113418:C:A	rs1014257	C	A	C	Hoxd3_MA0912.1	5	1	-	6.071951851901828	6.200746960107399	CAGGGGCAATGGCCCT
chr19	30159809	30159810	chr19:30159810:C:T	rs576307840	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr19	30450242	30450243	chr19:30450243:T:G	rs767641770	T	G	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr19	30487158	30487159	chr19:30487159:C:T	rs59290556	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr19	30493201	30493202	chr19:30493202:C:G	rs16964244	C	G	G	Hoxd3_MA0912.1	0	1	+	7.728952941502686	5.744576511619578	CTGTGCTAATGAAAAC
chr19	30604718	30604719	chr19:30604719:T:G	rs4805588	T	G	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	30611288	30611289	chr19:30611289:T:C	rs62103423	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr19	30643152	30643153	chr19:30643153:G:A	rs4804938	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr19	30720650	30720651	chr19:30720651:T:C	rs7351106	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	30739762	30739763	chr19:30739763:A:G	rs929690	A	G	G	Hoxd3_MA0912.1	15	1	-	6.885700994415643	6.1079964258276345	CTGTAGCCATTAGCGT
chr19	30794644	30794645	chr19:30794645:C:G	rs117723857	C	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr19	30862705	30862706	chr19:30862706:A:G	rs4804943	A	G	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr19	31078603	31078604	chr19:31078604:C:T	rs74632411	C	T	C	Hoxd3_MA0912.1	4	1	-	8.941666993510443	8.33743026499807	CTAAGGTAATTGCAGT
chr19	31186528	31186529	chr19:31186529:A:C	rs4805648	A	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr19	31312344	31312345	chr19:31312345:T:C	chr19:31312345:T:C	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr19	31436988	31436989	chr19:31436989:G:A	rs8107835	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr19	31449180	31449181	chr19:31449181:C:T	rs12975463	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr19	31586582	31586583	chr19:31586583:G:T	rs182421556	G	T	G	Hoxd3_MA0912.1	2	1	-	9.01875991824552	9.35239929178243	TTCTTTTAATTACTTT
chr19	31609966	31609967	chr19:31609967:A:G	chr19:31609967:A:G	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr19	31721478	31721479	chr19:31721479:T:C	rs114159294	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	31761638	31761639	chr19:31761639:G:A	rs407669	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr19	32201986	32201987	chr19:32201987:T:C	rs116828697	T	C	T	Hoxd3_MA0912.1	0	1	+	6.4227242002993075	6.370218702921377	TTGGGGTCATGAGTGC
chr19	32201992	32201993	chr19:32201993:T:G	rs1558292	T	G	G	Hoxd3_MA0912.1	11	1	-	6.138710047791076	-0.605926121621254	CTGCACTCATGACCCC
chr19	32343863	32343864	chr19:32343864:C:G	rs759617	C	G	C	Hoxd3_MA0912.1	5	1	-	6.783585046747771	6.595058713066934	TGGTGGTCATTACTGG
chr19	32392999	32393000	chr19:32393000:G:A	rs1375166973	G	A	G	Hoxd3_MA0912.1	12	1	-	6.626343188462637	5.419591268457773	CTGGACTCATTGCCCA
chr19	32397473	32397474	chr19:32397474:C:T	rs142589553	C	T	C	Hoxd3_MA0912.1	13	1	+	6.064299085975845	5.460062357463471	CTGGGGTGATTACCCT
chr19	32483831	32483832	chr19:32483832:A:T	rs1057395	A	T	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr19	32602495	32602496	chr19:32602496:C:T	rs8101356	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr19	32615202	32615203	chr19:32615203:T:C	rs410616	T	C	C	Hoxd3_MA0912.1	15	1	+	7.659919625136473	6.882215056548465	CTAGGCTAATGAGTCT
chr19	32702255	32702256	chr19:32702256:G:C	rs113282417	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr19	32877653	32877654	chr19:32877654:G:A	rs562524395	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	32877654	32877655	chr19:32877655:C:T	rs73041755	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr19	32915184	32915185	chr19:32915185:G:A	rs3764632	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr19	33032644	33032645	chr19:33032645:G:A	rs80030241	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr19	33067798	33067799	chr19:33067799:G:C	rs7256328	G	C	C	Hoxd3_MA0912.1	11	1	+	6.968867555562582	2.010157334331246	CTGAGGTCATTGCCTA
chr19	33349085	33349086	chr19:33349086:A:C	rs17529824	A	C	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr19	33406242	33406243	chr19:33406243:A:G	rs3786900	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	33406260	33406261	chr19:33406261:G:T	rs8104917	G	T	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr19	33406295	33406296	chr19:33406296:C:T	rs80173584	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr19	33496167	33496168	chr19:33496168:A:G	rs3786913	A	G	A	Hoxd3_MA0912.1	1	1	-	8.266475232325822	6.182414744789692	CTGCTGTAATTGACGG
chr19	33552467	33552468	chr19:33552468:C:G	rs12609149	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr19	33552496	33552497	chr19:33552497:G:A	rs34012271	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr19	33618065	33618066	chr19:33618066:C:T	rs55713058	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr19	33659378	33659379	chr19:33659379:A:G	rs12983177	A	G	A	Hoxd3_MA0912.1	0	1	-	7.817824685406409	7.76531918802848	TAGAAGTCATTACCTG
chr19	33674459	33674460	chr19:33674460:G:T	rs16968366	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr19	33687604	33687605	chr19:33687605:G:A	rs75496717	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr19	33828327	33828328	chr19:33828328:T:C	rs461998	T	C	T	Hoxd3_MA0912.1	9	1	+	7.2616226265642005	0.3730501669988382	CCTGGCTAATTACTTG
chr19	33936820	33936821	chr19:33936821:A:G	rs4805064	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr19	33947415	33947416	chr19:33947416:G:A	rs76453073	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr19	34096463	34096464	chr19:34096464:G:A	rs73593507	G	A	G	Hoxd3_MA0912.1	1	1	-	7.613093107168851	9.69715359470498	TCGGTGTAATTATCTG
chr19	34460117	34460118	chr19:34460118:A:G	rs3787035	A	G	a	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr19	34667483	34667484	chr19:34667484:T:C	rs4806034	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr19	34667504	34667505	chr19:34667505:T:C	rs2902473	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr19	34787534	34787535	chr19:34787535:A:C	rs117377425	A	C	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr19	35237310	35237311	chr19:35237311:A:G	rs2861487	A	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr19	35320432	35320433	chr19:35320433:A:G	rs17705279	A	G	A	Hoxd3_MA0912.1	8	1	+	7.9828831947352255	1.094310735169864	CTGGAATAATGACAGC
chr19	35320459	35320460	chr19:35320460:G:A	rs77480435	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	35348058	35348059	chr19:35348059:C:T	rs938554446	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr19	35348074	35348075	chr19:35348075:G:T	rs10426830	G	T	G	Hoxd3_MA0912.1	15	1	-	8.404172353496836	7.516869158495934	ATCAGATAATTACACC
chr19	35406065	35406066	chr19:35406066:C:T	rs8106407	C	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr19	35533464	35533465	chr19:35533465:G:C	rs62623387	G	C	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr19	35648593	35648594	chr19:35648594:A:G	rs148710794	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr19	36141754	36141755	chr19:36141755:T:C	rs17884904	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr19	36771926	36771927	chr19:36771927:C:T	rs540622064	C	T	C	Hoxd3_MA0912.1	15	1	-	11.239321098179758	10.398322471220542	CTGGGGTAATTACAGG
chr19	37865239	37865240	chr19:37865240:A:G	rs17249138	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr19	37984734	37984735	chr19:37984735:C:T	rs833912	C	T	T	Hoxd3_MA0912.1	14	1	-	9.639149173535664	8.695183843771531	CTGTTGTCATTAACGT
chr19	38066671	38066672	chr19:38066672:C:T	rs34900817	C	T	C	Hoxd3_MA0912.1	14	1	-	7.518851555445071	6.574886225680936	CCCAGCTAATTATCGT
chr19	38087385	38087386	chr19:38087386:T:C	rs1725489	T	C	C	Hoxd3_MA0912.1	15	1	-	7.963707346244163	8.80470597320338	GTGTGGTAATTAATGA
chr19	38096080	38096081	chr19:38096081:A:G	rs1654365	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr19	38506682	38506683	chr19:38506683:T:C	rs2915957	T	C	T	Hoxd3_MA0912.1	8	1	-	7.6301956649896105	0.7416232054242478	CTCATCTCATTACCCC
chr19	38515628	38515629	chr19:38515629:A:C	rs59591700	A	C	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr19	38836928	38836929	chr19:38836929:C:A	rs73040183	C	A	C	Hoxd3_MA0912.1	5	1	+	7.5343107045851685	6.998273661472682	ATGAGCCAATTACCAA
chr19	39007557	39007558	chr19:39007558:G:A	rs10410965	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr19	39195228	39195229	chr19:39195229:A:C	rs8103222	A	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr19	39524602	39524603	chr19:39524603:A:C	rs10418049	A	C	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr19	39804043	39804044	chr19:39804044:A:C	rs1003948	A	C	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr19	40005816	40005817	chr19:40005817:G:A	rs234374	G	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr19	40005819	40005820	chr19:40005820:G:T	rs77774986	G	T	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr19	40078580	40078581	chr19:40078581:A:T	rs73549810	A	T	A	Hoxd3_MA0912.1	6	1	-	7.202370383693049	2.8646793225990064	TTCGGCTAATGAGAGT
chr19	40164397	40164398	chr19:40164398:G:C	rs185347981	G	C	G	Hoxd3_MA0912.1	13	1	+	7.723171325625251	9.301249236338332	GTGGTGTAATTACGGC
chr19	40188587	40188588	chr19:40188588:G:C	rs56694147	G	C	G	Hoxd3_MA0912.1	14	1	-	8.077259697445998	7.900844332161551	CTGACATCATTACTCT
chr19	40367208	40367209	chr19:40367209:C:T	rs146886392	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	40442846	40442847	chr19:40442847:C:T	rs62109497	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	40458404	40458405	chr19:40458405:G:A	rs1061197	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr19	40463295	40463296	chr19:40463296:C:T	rs2613843	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr19	40769142	40769143	chr19:40769143:T:C	rs2604877	T	C	c	Hoxd3_MA0912.1	21	0	+	0	0	.
chr19	40875404	40875405	chr19:40875405:A:G	rs73048976	A	G	a	Hoxd3_MA0912.1	31	0	+	0	0	.
chr19	41323787	41323788	chr19:41323788:A:G	rs9282870	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr19	41355768	41355769	chr19:41355769:C:T	rs2317130	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr19	41380549	41380550	chr19:41380550:T:G	rs13345590	T	G	G	Hoxd3_MA0912.1	11	1	-	8.220106539125691	1.4754703697133618	CTCAAGCAATTAACTT
chr19	41416446	41416447	chr19:41416447:A:G	rs4803468	A	G	g	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	41456616	41456617	chr19:41456617:A:G	rs78273227	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr19	41600324	41600325	chr19:41600325:A:G	rs112932048	A	G	-	Hoxd3_MA0912.1	15	1	-	8.060541535218604	7.282836966630596	CAATGTCAATTACCCT
chr19	41604273	41604274	chr19:41604274:A:G	rs10420203	A	G	-	Hoxd3_MA0912.1	9	1	-	7.695622002890632	0.8070495433252687	ATGGGACAATGAACCT
chr19	41649446	41649447	chr19:41649447:C:G	rs4803494	C	G	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr19	41703023	41703024	chr19:41703024:C:T	rs147080062	C	T	c	Hoxd3_MA0912.1	16	0	-	0	0	.
chr19	41703030	41703031	chr19:41703031:A:C	rs7256597	A	C	N	Hoxd3_MA0912.1	9	1	-	7.8641292534480955	3.373452066681103	TAGAGGTCATTAATTC
chr19	41730085	41730086	chr19:41730086:C:T	rs11667651	C	T	c	Hoxd3_MA0912.1	30	0	+	0	0	.
chr19	41761980	41761981	chr19:41761981:T:G	rs11548735	T	G	t	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr19	41802393	41802394	chr19:41802394:G:A	rs7251336	G	A	g	Hoxd3_MA0912.1	1	1	+	7.874847737413444	8.732672010787635	CGGTGTTAATTGCCCC
chr19	42549142	42549143	chr19:42549143:C:T	rs10403915	C	T	c	Hoxd3_MA0912.1	18	0	-	0	0	.
chr19	42911504	42911505	chr19:42911505:G:C	rs4802143	G	C	.	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	43022578	43022579	chr19:43022579:A:C	rs4029163	A	C	.	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	43121022	43121023	chr19:43121023:T:G	rs35147128	T	G	.	Hoxd3_MA0912.1	8	1	-	7.615487142457466	3.1248099556904734	CAGAGGTCATTACGTT
chr19	43265680	43265681	chr19:43265681:G:A	rs4803591	G	A	.	Hoxd3_MA0912.1	24	0	+	0	0	.
chr19	43301175	43301176	chr19:43301176:G:A	rs4803596	G	A	.	Hoxd3_MA0912.1	0	1	-	7.893123527751374	7.945629025129305	CTCTTATAATTACCTG
chr19	43674477	43674478	chr19:43674478:G:C	rs344775	G	C	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr19	43674496	43674497	chr19:43674497:A:G	rs344774	A	G	G	Hoxd3_MA0912.1	13	1	+	7.727014505919259	6.753173323718551	CTGGGCCAATGACATT
chr19	43756528	43756529	chr19:43756529:A:C	rs346523	A	C	A	Hoxd3_MA0912.1	15	1	-	7.578898543654617	6.754889407024922	CTGGGACAATGACAGT
chr19	43759454	43759455	chr19:43759455:T:G	rs2107620	T	G	G	Hoxd3_MA0912.1	10	1	+	9.08690802671991	7.112965660539391	TTGTTCCAATTAATGT
chr19	43778878	43778879	chr19:43778879:T:C	rs56681946	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr19	43800035	43800036	chr19:43800036:G:A	rs56103707	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr19	44052028	44052029	chr19:44052029:G:A	chr19:44052029:G:A	G	A	.	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr19	44304119	44304120	chr19:44304120:C:T	rs73553294	C	T	C	Hoxd3_MA0912.1	0	1	+	9.135024825696624	9.187530323074554	CAGATGTAATTACTTG
chr19	44401205	44401206	chr19:44401206:T:C	rs150719240	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr19	44401213	44401214	chr19:44401214:C:A	rs112351719	C	A	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr19	44602551	44602552	chr19:44602552:G:A	rs58289141	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr19	44658486	44658487	chr19:44658487:C:T	rs148679696	C	T	C	Hoxd3_MA0912.1	12	1	-	6.369708787240065	7.337231018179095	CTGGGCCAATGAGAGC
chr19	44692042	44692043	chr19:44692043:T:G	rs16979372	T	G	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr19	44890895	44890896	chr19:44890896:C:T	rs375670446	C	T	.	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr19	44892072	44892073	chr19:44892073:A:G	rs2075649	A	G	.	Hoxd3_MA0912.1	22	0	+	0	0	.
chr19	45020324	45020325	chr19:45020325:G:A	rs4803791	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	45577423	45577424	chr19:45577424:C:T	rs892100	C	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr19	45843071	45843072	chr19:45843072:T:C	rs8106955	T	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr19	46078304	46078305	chr19:46078305:G:C	rs150472498	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	46078359	46078360	chr19:46078360:A:G	rs73046114	A	G	a	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	46205687	46205688	chr19:46205688:A:G	rs143594773	A	G	a	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr19	46478546	46478547	chr19:46478547:T:C	rs900274435	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr19	46616279	46616280	chr19:46616280:G:A	rs73056666	G	A	g	Hoxd3_MA0912.1	33	0	+	0	0	.
chr19	46648466	46648467	chr19:46648467:A:G	rs76081019	A	G	a	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	46866495	46866496	chr19:46866496:G:C	rs11669769	G	C	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr19	46875714	46875715	chr19:46875715:A:C	rs10408213	A	C	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr19	46875756	46875757	chr19:46875757:G:A	rs8103985	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr19	46985820	46985821	chr19:46985821:C:G	rs10500296	C	G	C	Hoxd3_MA0912.1	6	1	+	8.56193531761256	3.603225096381225	TTGGTGCAATTAACAG
chr19	47023218	47023219	chr19:47023219:T:C	rs560705570	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr19	47058800	47058801	chr19:47058801:G:T	rs114002520	G	T	g	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr19	47110868	47110869	chr19:47110869:A:G	rs150755174	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr19	47346274	47346275	chr19:47346275:C:T	rs3112443	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr19	47370206	47370207	chr19:47370207:C:T	rs370259843	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr19	47379334	47379335	chr19:47379335:G:C	rs745201	G	C	G	Hoxd3_MA0912.1	5	1	+	7.82567633927229	7.637150005591451	CACTGGTAATTACAGC
chr19	47518031	47518032	chr19:47518032:A:T	rs830135	A	T	T	Hoxd3_MA0912.1	15	1	-	8.6249633278102	6.959955564221289	AAGGAGTAATTAAAAT
chr19	47756220	47756221	chr19:47756221:T:C	rs10414116	T	C	C	Hoxd3_MA0912.1	0	1	+	6.341891331995888	6.289385834617959	TTGTGCTCATGAGCGG
chr19	47819957	47819958	chr19:47819958:T:C	rs73565775	T	C	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr19	47894952	47894953	chr19:47894953:C:T	rs2910396	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr19	48069467	48069468	chr19:48069468:C:T	rs7258675	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr19	48168331	48168332	chr19:48168332:A:C	rs10426471	A	C	C	Hoxd3_MA0912.1	9	1	-	8.088860576806276	3.598183390039284	CTGTCCTCATTACCTT
chr19	48168345	48168346	chr19:48168346:A:G	rs12611384	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr19	48445357	48445358	chr19:48445358:A:G	rs114542021	A	G	A	Hoxd3_MA0912.1	9	1	-	8.48446427952305	1.5958918199576848	TTTGGCTAATTGACAT
chr19	48445871	48445872	chr19:48445872:G:A	chr19:48445872:G:A	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr19	48818859	48818860	chr19:48818860:G:A	rs28445671	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr19	48838201	48838202	chr19:48838202:A:G	rs191834863	A	G	A	Hoxd3_MA0912.1	0	1	-	8.202552356927821	8.15004685954989	TTGTACCAATTAACCA
chr19	49153676	49153677	chr19:49153677:C:T	chr19:49153677:C:T	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr19	49478773	49478774	chr19:49478774:T:A	rs549253903	T	A	t	Hoxd3_MA0912.1	4	1	-	10.049380212521015	10.049380212521015	TTTAATTAATTAATTT
chr19	49478785	49478786	chr19:49478786:A:G	rs117486964	A	G	a	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr19	49564948	49564949	chr19:49564949:C:T	rs73934006	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr19	49589883	49589884	chr19:49589884:C:A	rs62128117	C	A	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr19	49676780	49676781	chr19:49676781:T:A	chr19:49676781:T:A	T	A	T	Hoxd3_MA0912.1	10	1	+	6.922812303395894	0.14312906076546517	GTGGGCCAATTGCCGT
chr19	49676801	49676802	chr19:49676802:G:A	rs112467874	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr19	49878017	49878018	chr19:49878018:C:A	rs149823478	C	A	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr19	49878023	49878024	chr19:49878024:G:A	rs563628961	G	A	G	Hoxd3_MA0912.1	5	1	+	5.214127578527636	4.489564201734313	CCGGGGCAATGGCCCT
chr19	49878026	49878027	chr19:49878027:A:G	rs937648015	A	G	A	Hoxd3_MA0912.1	8	1	+	5.214127578527636	-1.6744448810377257	CCGGGGCAATGGCCCT
chr19	49878052	49878053	chr19:49878053:G:A	rs575095266	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr19	50173242	50173243	chr19:50173243:C:G	rs759128061	C	G	C	Hoxd3_MA0912.1	14	1	+	7.401771694690437	7.22535632940599	CTGAGGCAATTGTCCC
chr19	50191974	50191975	chr19:50191975:T:A	rs590087	T	A	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr19	50206032	50206033	chr19:50206033:A:C	rs146114394	A	C	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr19	50300993	50300994	chr19:50300994:G:A	rs117143947	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr19	50604569	50604570	chr19:50604570:C:A	rs71355153	C	A	-	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr19	50791415	50791416	chr19:50791416:C:T	rs10412862	C	T	c	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr19	50815652	50815653	chr19:50815653:G:A	rs3909863	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr19	50980363	50980364	chr19:50980364:G:C	rs35354640	G	C	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr19	50992566	50992567	chr19:50992567:T:A	rs76313614	T	A	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr19	51019340	51019341	chr19:51019341:C:G	rs540828884	C	G	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr19	51021864	51021865	chr19:51021865:T:A	rs4417638	T	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr19	51320314	51320315	chr19:51320315:C:T	rs116517690	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr19	51320367	51320368	chr19:51320368:C:T	rs531560711	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr19	51373367	51373368	chr19:51373368:G:A	rs10420738	G	A	g	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr19	51373654	51373655	chr19:51373655:T:C	rs56771497	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	51451023	51451024	chr19:51451024:G:A	rs183708	G	A	G	Hoxd3_MA0912.1	6	1	-	7.934631512686383	9.720557460867376	GTGAGTCAATTACACC
chr19	51484681	51484682	chr19:51484682:C:G	rs79226814	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr19	51526077	51526078	chr19:51526078:A:G	rs8101465	A	G	-	Hoxd3_MA0912.1	10	1	-	11.567687720678506	4.788004478048078	TTGGAATAATTACCCT
chr19	51551055	51551056	chr19:51551056:G:C	rs73067339	G	C	g	Hoxd3_MA0912.1	4	1	+	5.739831403678939	4.161753492965857	CTGGGGCAATGGCAGC
chr19	51669339	51669340	chr19:51669340:C:A	rs12461881	C	A	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr19	51764449	51764450	chr19:51764450:G:T	rs17694990	G	T	.	Hoxd3_MA0912.1	26	0	+	0	0	.
chr19	51822647	51822648	chr19:51822648:C:T	rs79100666	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr19	52216337	52216338	chr19:52216338:G:A	rs2303685	G	A	G	Hoxd3_MA0912.1	2	1	+	7.253641071570447	5.803806027413408	CAGGGGTCATTGAACT
chr19	52231393	52231394	chr19:52231394:T:C	rs10401825	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr19	52231417	52231418	chr19:52231418:T:C	rs76856298	T	C	T	Hoxd3_MA0912.1	9	1	+	7.762971326083105	0.8743988665177418	CTGGTCTAATTGATAC
chr19	52231431	52231432	chr19:52231432:G:A	rs10426786	G	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr19	52529743	52529744	chr19:52529744:T:A	rs413751	T	A	N	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr19	52538422	52538423	chr19:52538423:C:A	rs3960293	C	A	N	Hoxd3_MA0912.1	14	1	+	8.760086330681798	7.6397056356332165	CTTGGCTAATGACTCT
chr19	52664567	52664568	chr19:52664568:C:T	rs67885014	C	T	c	Hoxd3_MA0912.1	2	1	-	7.737535572440354	6.287700528283315	TCGTGTTAATTGGCCT
chr19	52664635	52664636	chr19:52664636:G:T	rs138144191	G	T	g	Hoxd3_MA0912.1	34	0	+	0	0	.
chr19	52685541	52685542	chr19:52685542:T:C	rs112997235	T	C	t	Hoxd3_MA0912.1	2	1	-	7.7301281365150505	9.179963180672088	CAAGGTCAATTACTGT
chr19	52784041	52784042	chr19:52784042:T:G	rs12972723	T	G	-	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr19	52796215	52796216	chr19:52796216:G:C	rs79767538	G	C	g	Hoxd3_MA0912.1	33	0	-	0	0	.
chr19	52796221	52796222	chr19:52796222:A:G	rs73067535	A	G	a	Hoxd3_MA0912.1	27	0	-	0	0	.
chr19	52914085	52914086	chr19:52914086:C:G	rs11084206	C	G	c	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr19	52963150	52963151	chr19:52963151:G:A	rs187857443	G	A	g	Hoxd3_MA0912.1	31	0	-	0	0	.
chr19	52991601	52991602	chr19:52991602:C:T	rs4803032	C	T	N	Hoxd3_MA0912.1	24	0	+	0	0	.
chr19	53011350	53011351	chr19:53011351:A:G	rs10426414	A	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr19	53645700	53645701	chr19:53645701:G:A	rs8104521	G	A	G	Hoxd3_MA0912.1	4	1	+	8.362283294934388	7.7580465664220135	CTACGATAATTAACAT
chr19	53793343	53793344	chr19:53793344:T:C	rs190421746	T	C	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr19	54002808	54002809	chr19:54002809:G:A	rs34281166	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr19	54015170	54015171	chr19:54015171:C:T	rs57182081	C	T	T	Hoxd3_MA0912.1	0	1	+	9.235963388728925	9.288468886106855	CTGAAGTAATGAGCGT
chr19	54103655	54103656	chr19:54103656:A:G	rs188697440	A	G	a	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr19	54210188	54210189	chr19:54210189:A:G	rs3865476	A	G	a	Hoxd3_MA0912.1	15	1	+	8.72959057853004	9.570589205489256	CTGGGTTAATGACACA
chr19	54210204	54210205	chr19:54210205:T:C	rs115586252	T	C	t	Hoxd3_MA0912.1	31	0	+	0	0	.
chr19	54264110	54264111	chr19:54264111:G:A	rs12974390	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr19	54449995	54449996	chr19:54449996:G:A	rs1559193	G	A	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr19	54450044	54450045	chr19:54450045:C:T	rs1559194	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr19	54476424	54476425	chr19:54476425:T:G	rs12983348	T	G	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr19	54692150	54692151	chr19:54692151:G:T	rs10420435	G	T	G	Hoxd3_MA0912.1	0	1	+	6.830763607022862	8.8676455342839	GTGTGGTCATTACAGG
chr19	54726149	54726150	chr19:54726150:T:C	rs2075731	T	C	C	Hoxd3_MA0912.1	8	1	-	9.126754796057591	2.2381823364922298	CTGAATTCATTAAACC
chr19	54730410	54730411	chr19:54730411:T:A	rs34483320	T	A	.	Hoxd3_MA0912.1	22	0	-	0	0	.
chr19	54951743	54951744	chr19:54951744:A:G	rs113145757	A	G	A	Hoxd3_MA0912.1	9	1	-	8.346307979916526	1.4577355203511628	TTCGTCTAATGACCCT
chr19	55226778	55226779	chr19:55226779:C:G	rs9284430	C	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr19	55624978	55624979	chr19:55624979:T:C	rs113236551	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr19	55632522	55632523	chr19:55632523:T:C	rs190517042	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr19	55632542	55632543	chr19:55632543:C:T	chr19:55632543:C:T	C	T	C	Hoxd3_MA0912.1	5	1	-	8.089721940950113	7.365158564156788	ATAAGGTAATGACAGT
chr19	55634197	55634198	chr19:55634198:A:G	rs113776128	A	G	a	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr19	55653278	55653279	chr19:55653279:G:A	rs184498111	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr19	55653304	55653305	chr19:55653305:C:T	rs28375493	C	T	C	Hoxd3_MA0912.1	0	1	-	7.205077780405814	8.525525575728118	GGGGGCTAATTACACC
chr19	55946080	55946081	chr19:55946081:C:G	rs78338016	C	G	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr19	55946088	55946089	chr19:55946089:A:G	rs674573	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr19	56109180	56109181	chr19:56109181:G:A	rs77070554	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr19	56740469	56740470	chr19:56740470:C:T	rs76101456	C	T	c	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr19	56910961	56910962	chr19:56910962:A:G	rs7259442	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr19	57476830	57476831	chr19:57476831:C:G	rs35273075	C	G	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr19	57769565	57769566	chr19:57769566:C:G	rs142760051	C	G	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr19	57769573	57769574	chr19:57769574:T:A	rs116258872	T	A	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr19	57801900	57801901	chr19:57801901:G:A	rs140961945	G	A	.	Hoxd3_MA0912.1	12	1	-	8.479724453436058	7.272972533431194	TTGTTGTAATGACCTG
chr19	57815880	57815881	chr19:57815881:A:G	rs10403791	A	G	.	Hoxd3_MA0912.1	1	1	-	7.042786222523084	4.958725734986954	CTGGGGCAATTGCCTA
chr19	57827591	57827592	chr19:57827592:A:G	rs4480910	A	G	.	Hoxd3_MA0912.1	30	0	+	0	0	.
chr19	57903252	57903253	chr19:57903253:T:A	chr19:57903253:T:A	T	A	.	Hoxd3_MA0912.1	34	0	+	0	0	.
chr19	58440189	58440190	chr19:58440190:G:C	rs943402210	G	C	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr19	58440193	58440194	chr19:58440194:T:G	rs113677141	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr19	58440237	58440238	chr19:58440238:C:T	rs115491346	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	11943	11944	chr2:11944:C:T	rs10172629	C	T	.	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	69430	69431	chr2:69431:C:T	rs11695591	C	T	c	Hoxd3_MA0912.1	13	1	-	9.930064332509136	10.903905514709844	TTGGGGTAATTACGTG
chr2	440588	440589	chr2:440589:A:G	rs2685231	A	G	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	448527	448528	chr2:448528:C:T	rs58769186	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	585640	585641	chr2:585641:G:A	rs28432739	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	772649	772650	chr2:772650:G:A	rs4374408	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	776607	776608	chr2:776608:C:T	rs4854278	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	865891	865892	chr2:865892:C:T	rs4992458	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	865936	865937	chr2:865937:G:A	rs4992456	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	889531	889532	chr2:889532:T:C	rs11899459	T	C	t	Hoxd3_MA0912.1	8	1	-	8.453438115112256	1.5648656555468934	CTGGCATAATTAGCAT
chr2	889540	889541	chr2:889541:C:T	rs78709372	C	T	N	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	932882	932883	chr2:932883:A:G	rs13427113	A	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	1614578	1614579	chr2:1614579:G:A	rs62114654	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	1730708	1730709	chr2:1730709:C:T	rs139128996	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	1748779	1748780	chr2:1748780:C:T	rs11127321	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	1774046	1774047	chr2:1774047:G:C	rs10048704	G	C	G	Hoxd3_MA0912.1	4	1	+	10.812427338448073	9.23434942773499	TCGGGGTAATTACCCT
chr2	2323522	2323523	chr2:2323523:G:A	rs6715366	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	2327560	2327561	chr2:2327561:A:T	rs13411982	A	T	T	Hoxd3_MA0912.1	11	1	+	9.439721559949398	5.102030498855358	ATGGAGTAATTAGATT
chr2	2434814	2434815	chr2:2434815:A:G	rs7570239	A	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	2434820	2434821	chr2:2434821:A:G	rs7570237	A	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	2558937	2558938	chr2:2558938:T:G	rs1344210735	T	G	T	Hoxd3_MA0912.1	15	1	+	8.784110732641723	7.960101596012029	TGGAGGTAATTAAGTT
chr2	2607167	2607168	chr2:2607168:G:T	rs7590656	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	2919100	2919101	chr2:2919101:A:T	rs146487035	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	3091991	3091992	chr2:3091992:G:A	rs12621944	G	A	A	Hoxd3_MA0912.1	13	1	-	8.026767063858546	7.422530335346172	TTTGCCTAATTGCCCT
chr2	3092021	3092022	chr2:3092022:T:A	rs78089368	T	A	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	3115431	3115432	chr2:3115432:C:T	rs115690451	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	3193917	3193918	chr2:3193918:G:C	rs142651251	G	C	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	3288001	3288002	chr2:3288002:C:T	rs35445537	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	3679409	3679410	chr2:3679410:A:G	rs34616879	A	G	A	Hoxd3_MA0912.1	3	1	-	7.5559185073521995	6.819237284772527	CTGTGTTCATTGTCCT
chr2	3822879	3822880	chr2:3822880:T:C	rs11675756	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	3953898	3953899	chr2:3953899:T:C	chr2:3953899:T:C	T	C	T	Hoxd3_MA0912.1	13	1	-	8.406561141692787	7.432719959492077	AAGGCCTAATTACAGT
chr2	4965175	4965176	chr2:4965176:T:C	rs36178807	T	C	T	Hoxd3_MA0912.1	5	1	+	8.750112950913007	8.432791509026599	ATGGTTTAATTGCTTT
chr2	5062767	5062768	chr2:5062768:C:T	rs6731394	C	T	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	5080726	5080727	chr2:5080727:A:G	rs575035396	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	5834643	5834644	chr2:5834644:A:C	rs1319556	A	C	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	5946840	5946841	chr2:5946841:A:T	rs7422251	A	T	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	5946849	5946850	chr2:5946850:G:C	rs7420162	G	C	G	Hoxd3_MA0912.1	15	1	-	9.034116948230917	8.987812380189231	AAGATTTAATTACTGC
chr2	6012000	6012001	chr2:6012001:G:A	rs2693833	G	A	A	Hoxd3_MA0912.1	14	1	+	9.199447474829164	8.25548214506503	CTGGGTCAATTATAGT
chr2	6018019	6018020	chr2:6018020:T:C	rs4670030	T	C	c	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	6352054	6352055	chr2:6352055:T:C	rs78504410	T	C	T	Hoxd3_MA0912.1	4	1	-	10.81052653315547	11.414763261667844	TTGAATTAATTAAAAT
chr2	6371220	6371221	chr2:6371221:T:G	rs16865084	T	G	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	6510709	6510710	chr2:6510710:T:C	rs16865273	T	C	T	Hoxd3_MA0912.1	8	1	-	7.1992901717354005	0.3107177121700371	CAGGGGTAATTGGCCA
chr2	6977331	6977332	chr2:6977332:T:C	rs55736658	T	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	6977332	6977333	chr2:6977333:T:A	rs143151554	T	A	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	7127352	7127353	chr2:7127353:A:G	rs56803086	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	7265712	7265713	chr2:7265713:C:T	rs4669171	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	7330122	7330123	chr2:7330123:C:T	rs73157318	C	T	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	7762879	7762880	chr2:7762880:T:C	rs2117566	T	C	c	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	8038604	8038605	chr2:8038605:A:G	rs1364054	A	G	A	Hoxd3_MA0912.1	11	1	+	8.9924957305462	7.206569782365206	ATGTGCTAATTATCTC
chr2	8142573	8142574	chr2:8142574:A:C	rs12463875	A	C	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	8174559	8174560	chr2:8174560:A:G	rs13003164	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	8408944	8408945	chr2:8408945:C:T	rs138449007	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	8448944	8448945	chr2:8448945:G:A	rs528338613	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	8451895	8451896	chr2:8451896:G:A	rs6707327	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	8494572	8494573	chr2:8494573:T:A	rs187442764	T	A	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	8494590	8494591	chr2:8494591:T:C	rs72782785	T	C	T	Hoxd3_MA0912.1	10	1	+	10.070421879313333	3.2907386366829052	CTTAACTAATTACCCC
chr2	8535079	8535080	chr2:8535080:C:T	rs146565664	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	8610135	8610136	chr2:8610136:A:G	rs3856447	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	8821324	8821325	chr2:8821325:C:T	rs78678891	C	T	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	8927892	8927893	chr2:8927893:G:T	rs116022117	G	T	G	Hoxd3_MA0912.1	14	1	-	8.221546799312348	7.1011661042637675	GTGAGCCAATTAACCC
chr2	9106518	9106519	chr2:9106519:T:C	rs328633	T	C	G	Hoxd3_MA0912.1	3	1	+	10.30025344477294	9.563572222193267	ATGTGTTAATTACTGC
chr2	9174808	9174809	chr2:9174809:G:A	rs73151839	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	9239515	9239516	chr2:9239516:C:G	rs13015804	C	G	G	Hoxd3_MA0912.1	12	1	+	8.245096908038892	7.277574677099864	CTGAACTCATTACTTC
chr2	9382893	9382894	chr2:9382894:C:T	rs73150935	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	9812262	9812263	chr2:9812263:T:C	rs10803703	T	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	9996990	9996991	chr2:9996991:A:G	rs2357394	A	G	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	10126435	10126436	chr2:10126436:G:A	rs6759180	G	A	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	10300499	10300500	chr2:10300500:A:G	rs78081164	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	10326725	10326726	chr2:10326726:G:A	rs10210323	G	A	G	Hoxd3_MA0912.1	13	1	-	7.303212633598676	6.698975905086302	CTGTGCTCATGAACGC
chr2	10336524	10336525	chr2:10336525:C:T	rs17882379	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	10431282	10431283	chr2:10431283:T:C	rs76025795	T	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	10646368	10646369	chr2:10646369:C:T	rs114986093	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	10904060	10904061	chr2:10904061:A:G	rs115117372	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	11070743	11070744	chr2:11070744:C:T	rs730990	C	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	11375292	11375293	chr2:11375293:C:T	rs117112822	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	11375303	11375304	chr2:11375304:T:C	rs56252168	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	11385519	11385520	chr2:11385520:G:T	rs145921652	G	T	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	11390039	11390040	chr2:11390040:A:G	rs78989541	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	11546695	11546696	chr2:11546696:C:T	rs78738104	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	11580155	11580156	chr2:11580156:A:G	rs35217326	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr2	11580172	11580173	chr2:11580173:C:T	rs113467400	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	11809765	11809766	chr2:11809766:A:C	rs1033211705	A	C	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	11991453	11991454	chr2:11991454:C:A	rs115134486	C	A	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	12048007	12048008	chr2:12048008:G:A	rs73181463	G	A	A	Hoxd3_MA0912.1	12	1	-	9.794085742708166	8.587333822703302	CTGGTGTAATTACTGA
chr2	12071146	12071147	chr2:12071147:C:A	rs10199513	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	12089273	12089274	chr2:12089274:T:C	rs142418901	T	C	T	Hoxd3_MA0912.1	8	1	-	9.380023200893392	2.49145074132803	CTGTGTTCATTACATT
chr2	12175072	12175073	chr2:12175073:T:G	rs4669821	T	G	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	12177157	12177158	chr2:12177158:C:A	rs35611779	C	A	C	Hoxd3_MA0912.1	14	1	+	8.659515974200245	7.5391352791516635	CTGTGCTAATGAGTCT
chr2	12264570	12264571	chr2:12264571:A:C	rs1120601	A	C	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	12264581	12264582	chr2:12264582:A:G	rs1120602	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr2	12468915	12468916	chr2:12468916:A:G	rs6722161	A	G	A	Hoxd3_MA0912.1	12	1	+	7.934631512686383	6.967109281747352	GTGAGTCAATTAAACC
chr2	12499007	12499008	chr2:12499008:A:G	rs76622659	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	12590446	12590447	chr2:12590447:C:G	rs114579755	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	12643924	12643925	chr2:12643925:T:A	rs6721562	T	A	T	Hoxd3_MA0912.1	7	1	-	9.08421024494652	2.304527002316092	TTGAGTCAATTAAACA
chr2	12672747	12672748	chr2:12672748:T:C	rs111452822	T	C	T	Hoxd3_MA0912.1	14	1	+	9.226025167474285	9.790361613606576	CTGGTTTAATGACTTT
chr2	12672758	12672759	chr2:12672759:C:T	rs736709	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	12676751	12676752	chr2:12676752:T:C	rs62124716	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	12845002	12845003	chr2:12845003:G:T	rs890070	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	13021294	13021295	chr2:13021295:T:A	rs1850254	T	A	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	13052722	13052723	chr2:13052723:G:A	rs1878156	G	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	13054538	13054539	chr2:13054539:A:G	rs4281879	A	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	13084045	13084046	chr2:13084046:C:T	rs76680758	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	13500121	13500122	chr2:13500122:T:C	rs6743993	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	13742886	13742887	chr2:13742887:G:A	rs576946757	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	14385410	14385411	chr2:14385411:C:G	rs76662140	C	G	C	Hoxd3_MA0912.1	0	1	+	9.843229161767958	7.858852731884849	CTGTTGTAATTACTTC
chr2	14963953	14963954	chr2:14963954:G:A	rs11892388	G	A	G	Hoxd3_MA0912.1	15	1	-	8.669433231041081	9.44713779962909	TTAGGCTAATTATTCC
chr2	14998947	14998948	chr2:14998948:C:A	rs72771024	C	A	C	Hoxd3_MA0912.1	4	1	+	8.672756578538255	9.646597760738963	TAGTCCTAATTAATGT
chr2	14998952	14998953	chr2:14998953:T:C	rs189761277	T	C	T	Hoxd3_MA0912.1	9	1	+	8.672756578538255	1.784184118972893	TAGTCCTAATTAATGT
chr2	15092686	15092687	chr2:15092687:G:A	rs1178194	G	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	15092700	15092701	chr2:15092701:C:T	rs10171235	C	T	C	Hoxd3_MA0912.1	15	1	-	7.988903219620303	7.147904592661087	TCGGACTAATTATCCG
chr2	15591480	15591481	chr2:15591481:C:T	rs4668936	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	15642682	15642683	chr2:15642683:A:G	rs807621	A	G	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	15730202	15730203	chr2:15730203:G:T	rs145292493	G	T	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	15730328	15730329	chr2:15730329:T:C	rs62117264	T	C	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	15730337	15730338	chr2:15730338:G:A	chr2:15730338:G:A	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	15838047	15838048	chr2:15838048:C:T	rs4669005	C	T	T	Hoxd3_MA0912.1	12	1	+	8.291350952051548	7.084599032046684	CTGGTCTCATTGCCCT
chr2	16050759	16050760	chr2:16050760:A:G	rs934059	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr2	16119568	16119569	chr2:16119569:T:G	rs138786923	T	G	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	16189561	16189562	chr2:16189562:C:G	rs58155566	C	G	C	Hoxd3_MA0912.1	2	1	-	8.756635697261071	6.973161279567123	TTGAATTAATTGCATG
chr2	16294150	16294151	chr2:16294151:C:G	rs340750	C	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	16332027	16332028	chr2:16332028:G:C	rs79344866	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	16386872	16386873	chr2:16386873:T:C	rs11678335	T	C	T	Hoxd3_MA0912.1	8	1	-	9.589365615056487	2.7007931554911235	ATGAGTTAATTAATTA
chr2	16429507	16429508	chr2:16429508:G:A	rs34137698	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	16530784	16530785	chr2:16530785:C:T	rs11897201	C	T	c	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	16530825	16530826	chr2:16530826:A:C	rs188713275	A	C	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	16775266	16775267	chr2:16775267:T:C	rs9306898	T	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	16948002	16948003	chr2:16948003:C:G	rs6704660	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	17204200	17204201	chr2:17204201:G:A	rs13015926	G	A	G	Hoxd3_MA0912.1	5	1	+	8.98519278012561	8.260629403332286	CAGATGTAATTAAGTT
chr2	17204218	17204219	chr2:17204219:C:A	rs287292	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	17573039	17573040	chr2:17573040:T:C	rs16983644	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	17857412	17857413	chr2:17857413:C:G	rs11898180	C	G	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	18047271	18047272	chr2:18047272:T:C	rs7588918	T	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	18092326	18092327	chr2:18092327:T:C	rs2345098	T	C	C	Hoxd3_MA0912.1	4	1	+	9.153577519065042	8.179736336864332	ATCATCTAATTACCTT
chr2	18092356	18092357	chr2:18092357:A:G	rs2345099	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	18178961	18178962	chr2:18178962:T:C	rs1993163	T	C	C	Hoxd3_MA0912.1	1	1	+	8.544787887933687	6.460727400397555	CTCCAATAATTACCCT
chr2	18178981	18178982	chr2:18178982:G:A	rs76386190	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	18370242	18370243	chr2:18370243:G:A	rs11096532	G	A	A	Hoxd3_MA0912.1	13	1	-	7.126026131888861	6.521789403376488	AAGAGGTCATTAGCGG
chr2	18780582	18780583	chr2:18780583:T:C	rs7599089	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr2	18780590	18780591	chr2:18780591:C:T	rs13339828	C	T	C	Hoxd3_MA0912.1	14	1	-	10.547268449018823	9.60330311925469	ATGATCTAATTACCGC
chr2	18824277	18824278	chr2:18824278:C:T	rs11096560	C	T	C	Hoxd3_MA0912.1	4	1	-	9.863307157447533	9.259070428935159	CTTTGTTAATTACCTC
chr2	18899978	18899979	chr2:18899979:A:C	rs4832461	A	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	19142346	19142347	chr2:19142347:T:C	rs4144721	T	C	T	Hoxd3_MA0912.1	0	1	+	9.867560120516732	9.815054623138801	TTGAACCAATTACCTT
chr2	20033583	20033584	chr2:20033584:G:A	rs13415152	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	20100911	20100912	chr2:20100912:A:C	rs907865	A	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	20166721	20166722	chr2:20166722:G:A	rs62109687	G	A	G	Hoxd3_MA0912.1	7	1	-	8.103334534052024	3.297593657602115	CTGGGCTCATGAATCT
chr2	20166738	20166739	chr2:20166739:C:T	rs183072614	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	20512012	20512013	chr2:20512013:C:T	rs73916843	C	T	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	20524854	20524855	chr2:20524855:G:C	rs57877829	G	C	g	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	20524903	20524904	chr2:20524904:C:T	rs749569343	C	T	c	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	20538311	20538312	chr2:20538312:C:A	rs77521071	C	A	c	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	21028167	21028168	chr2:21028168:T:G	rs570877	T	G	G	Hoxd3_MA0912.1	1	1	+	7.9975710737669035	5.913510586230773	TTGATTTCATTGACCC
chr2	21047184	21047185	chr2:21047185:A:G	rs588245	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	21162905	21162906	chr2:21162906:C:G	rs1712248	C	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	21290398	21290399	chr2:21290399:G:A	rs56286635	G	A	g	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	21315937	21315938	chr2:21315938:A:C	rs219548	A	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	21315953	21315954	chr2:21315954:T:C	rs219549	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	21392817	21392818	chr2:21392818:A:G	rs6714865	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	22110549	22110550	chr2:22110550:C:A	rs371364161	C	A	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	22192105	22192106	chr2:22192106:A:C	rs6723676	A	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	22220967	22220968	chr2:22220968:G:A	rs4557006	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	22248879	22248880	chr2:22248880:A:G	rs58252706	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	22515669	22515670	chr2:22515670:G:T	rs6729322	G	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	22515707	22515708	chr2:22515708:G:A	rs12712505	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	22557691	22557692	chr2:22557692:C:G	rs11124553	C	G	C	Hoxd3_MA0912.1	2	1	-	7.983103586452841	6.199629168758892	AGGAGTTAATTAAGCC
chr2	22690376	22690377	chr2:22690377:C:T	rs76628950	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	23079224	23079225	chr2:23079225:G:A	rs13036116	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	23158836	23158837	chr2:23158837:T:G	rs12470255	T	G	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	23466163	23466164	chr2:23466164:G:A	rs1530045	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	23777780	23777781	chr2:23777781:A:G	rs80209559	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	23912163	23912164	chr2:23912164:A:G	rs12616257	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	24192176	24192177	chr2:24192177:C:G	rs75945474	C	G	C	Hoxd3_MA0912.1	14	1	+	7.784714132715445	7.608298767430998	GTGTGTTAATTGGCCT
chr2	24383182	24383183	chr2:24383183:A:C	rs2339980	A	C	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	24775916	24775917	chr2:24775917:T:C	rs78968061	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	24825040	24825041	chr2:24825041:A:G	rs934610	A	G	G	Hoxd3_MA0912.1	9	1	-	7.633324642834518	0.7447521832691555	CTGCTGTAATTACGGA
chr2	24840272	24840273	chr2:24840273:G:A	rs934608	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	25018151	25018152	chr2:25018152:G:A	rs4665757	G	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	25257689	25257690	chr2:25257690:C:G	rs915301610	C	G	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	25286547	25286548	chr2:25286548:G:C	rs142082647	G	C	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	25372324	25372325	chr2:25372325:T:C	rs1010658	T	C	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	25372334	25372335	chr2:25372335:G:T	rs143670184	G	T	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	25867784	25867785	chr2:25867785:G:A	rs10205527	G	A	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	25867784	25867785	chr2:25867785:G:C	chr2:25867785:G:C	G	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	25974492	25974493	chr2:25974493:G:T	rs114498594	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	26594929	26594930	chr2:26594930:A:G	rs56414406	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	27101855	27101856	chr2:27101856:G:C	rs2384571	G	C	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	27371745	27371746	chr2:27371746:C:T	rs114862813	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	27409956	27409957	chr2:27409957:T:G	rs528744217	T	G	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	27517536	27517537	chr2:27517537:C:G	rs11127044	C	G	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	27753634	27753635	chr2:27753635:G:C	rs143000750	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	27843007	27843008	chr2:27843008:C:G	rs34139736	C	G	C	Hoxd3_MA0912.1	14	1	-	10.163808737208672	10.34022410249312	CTGTCTTAATTAAAGT
chr2	27967265	27967266	chr2:27967266:G:A	rs74919716	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	28231173	28231174	chr2:28231174:G:C	rs7595527	G	C	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	28281282	28281283	chr2:28281283:G:C	rs870969	G	C	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	28410145	28410146	chr2:28410146:G:A	rs78823708	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	28439705	28439706	chr2:28439706:A:G	rs28740870	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	28546413	28546414	chr2:28546414:G:A	rs12468388	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	28548756	28548757	chr2:28548757:T:G	rs11680168	T	G	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	28594977	28594978	chr2:28594978:G:C	rs73922188	G	C	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	28628826	28628827	chr2:28628827:A:G	rs56145924	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	28720998	28720999	chr2:28720999:C:T	rs34409160	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	29062114	29062115	chr2:29062115:T:C	rs10187620	T	C	T	Hoxd3_MA0912.1	9	1	+	8.680350815860304	1.7917783562949432	TTGACCTAATTGACCC
chr2	29361271	29361272	chr2:29361272:G:A	rs80015033	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	29493297	29493298	chr2:29493298:G:A	rs11689118	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	29610948	29610949	chr2:29610949:T:A	rs4635487	T	A	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	29735974	29735975	chr2:29735975:C:T	rs2631958	C	T	T	Hoxd3_MA0912.1	5	1	-	8.738882268256445	8.014318891463121	TAGGGGTAATTATAAT
chr2	29790229	29790230	chr2:29790230:G:A	rs2879482	G	A	A	Hoxd3_MA0912.1	5	1	+	8.507225540768847	7.782662163975521	CTGCCGTAATTAGACT
chr2	29848482	29848483	chr2:29848483:A:G	rs4074251	A	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	30115486	30115487	chr2:30115487:G:A	chr2:30115487:G:A	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	30252166	30252167	chr2:30252167:C:T	rs116430567	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr2	30252371	30252372	chr2:30252372:T:G	rs11690883	T	G	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	30269039	30269040	chr2:30269040:G:C	rs141934083	G	C	C	Hoxd3_MA0912.1	12	1	-	8.692312316990959	7.724790086051929	TTTGCCTAATTACCAT
chr2	30500031	30500032	chr2:30500032:A:G	rs75547092	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	30650500	30650501	chr2:30650501:C:T	rs2593466	C	T	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	31048790	31048791	chr2:31048791:A:G	rs13008743	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	31048791	31048792	chr2:31048792:G:C	rs13009298	G	C	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	31496261	31496262	chr2:31496262:T:G	rs206843	T	G	g	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	31496280	31496281	chr2:31496281:G:A	rs13016636	G	A	g	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	31726661	31726662	chr2:31726662:C:A	rs11124268	C	A	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	31979068	31979069	chr2:31979069:G:T	rs34316760	G	T	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr2	32533285	32533286	chr2:32533286:A:C	rs2710628	A	C	A	Hoxd3_MA0912.1	7	1	+	8.514546870108148	6.54060450392763	CTGCTGTAATGAACTT
chr2	33082147	33082148	chr2:33082148:G:T	rs79430115	G	T	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	33247649	33247650	chr2:33247650:T:C	rs528993117	T	C	T	Hoxd3_MA0912.1	11	1	-	9.764443850485316	7.978517902304324	CAGTGTTAATTAGCTT
chr2	33374368	33374369	chr2:33374369:C:T	rs72861446	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	33438041	33438042	chr2:33438042:A:G	rs6718472	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	33474953	33474954	chr2:33474954:T:C	rs13429575	T	C	T	Hoxd3_MA0912.1	11	1	-	11.161788788294606	9.375862840113612	CTGGGTTAATTATTCT
chr2	33502912	33502913	chr2:33502913:A:T	rs12988472	A	T	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	33530392	33530393	chr2:33530393:G:A	rs4670657	G	A	g	Hoxd3_MA0912.1	14	1	+	9.098867675780555	8.154902346016422	AATAGTTAATTACAGT
chr2	33586637	33586638	chr2:33586638:T:A	rs35346181	T	A	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	33704388	33704389	chr2:33704389:A:C	rs1375195	A	C	A	Hoxd3_MA0912.1	6	1	-	10.64006577211956	3.89542960270723	TTGGGATAATTAGCTT
chr2	34012034	34012035	chr2:34012035:A:G	rs10197794	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	34063972	34063973	chr2:34063973:C:T	rs12712370	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	34102754	34102755	chr2:34102755:T:G	rs71448001	T	G	T	Hoxd3_MA0912.1	12	1	-	8.937757866122277	8.937757866122277	ATGAGCCAATTAAACC
chr2	34452840	34452841	chr2:34452841:G:C	rs11124374	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	34736645	34736646	chr2:34736646:C:G	rs3108096	C	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	34868225	34868226	chr2:34868226:T:G	rs7600259	T	G	T	Hoxd3_MA0912.1	6	1	+	10.008466197118691	3.2638300277063625	TTGTGTTAATTGCTGT
chr2	35293279	35293280	chr2:35293280:A:C	rs6710170	A	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	35410103	35410104	chr2:35410104:T:C	rs62141963	T	C	T	Hoxd3_MA0912.1	9	1	+	7.82053376164736	0.9319613020819968	GTGGGTCAATTAAACC
chr2	35503648	35503649	chr2:35503649:A:T	rs11124444	A	T	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	35708707	35708708	chr2:35708708:A:G	rs6744761	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr2	35708748	35708749	chr2:35708749:G:C	rs6716654	G	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	36012930	36012931	chr2:36012931:A:G	rs6543990	A	G	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	36028602	36028603	chr2:36028603:C:T	rs1352513	C	T	T	Hoxd3_MA0912.1	13	1	+	7.498165601469919	6.893928872957545	TTCACCTAATTGCCGT
chr2	36423380	36423381	chr2:36423381:C:G	rs1168857605	C	G	C	Hoxd3_MA0912.1	3	1	-	9.785244305238864	8.598324387565922	AAGGTGTAATTAACTT
chr2	37344093	37344094	chr2:37344094:T:C	rs28384455	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	37365900	37365901	chr2:37365901:G:A	rs72792854	G	A	G	Hoxd3_MA0912.1	4	1	+	7.934027952397608	7.329791223885234	TTGTGGTCATGAACTT
chr2	37459407	37459408	chr2:37459408:T:C	rs17482317	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	37506968	37506969	chr2:37506969:C:T	rs35332669	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	37506997	37506998	chr2:37506998:T:C	rs4450582	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	37583448	37583449	chr2:37583449:A:G	rs143224522	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	37626039	37626040	chr2:37626040:G:A	rs114814051	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	37672571	37672572	chr2:37672572:G:C	rs4670759	G	C	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	37924904	37924905	chr2:37924905:G:A	rs76582738	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	38046277	38046278	chr2:38046278:C:T	rs56712824	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	38281640	38281641	chr2:38281641:C:T	rs1375009	C	T	C	Hoxd3_MA0912.1	0	1	+	7.816270468183402	7.8687759655613325	CTGAGGTCATTGATCC
chr2	38666966	38666967	chr2:38666967:C:T	rs78064564	C	T	c	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	38671538	38671539	chr2:38671539:C:A	rs13019170	C	A	A	Hoxd3_MA0912.1	0	1	+	9.037350054550792	8.373421419989986	CTGATCCAATTACCTC
chr2	39217432	39217433	chr2:39217433:A:C	rs55884310	A	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	39217469	39217470	chr2:39217470:G:A	rs56755150	G	A	g	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	39409280	39409281	chr2:39409281:T:A	rs6727395	T	A	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	39495294	39495295	chr2:39495295:A:G	rs75473507	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	39664437	39664438	chr2:39664438:T:A	rs74781408	T	A	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	39772863	39772864	chr2:39772864:T:G	rs72787316	T	G	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	39954642	39954643	chr2:39954643:G:A	rs10490338	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	40073460	40073461	chr2:40073461:A:G	rs11676262	A	G	A	Hoxd3_MA0912.1	4	1	+	11.044936322403505	11.649173050915879	CTGAACTAATTAACAT
chr2	40106011	40106012	chr2:40106012:T:C	rs17558542	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	40106022	40106023	chr2:40106023:T:C	rs140535088	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr2	40304403	40304404	chr2:40304404:C:G	rs72939240	C	G	C	Hoxd3_MA0912.1	5	1	-	10.609434303903619	10.420907970222782	ATGTGGTAATTAACAT
chr2	40410641	40410642	chr2:40410642:T:C	rs2160238	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	40543698	40543699	chr2:40543699:C:T	rs35422863	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	40635882	40635883	chr2:40635883:A:G	rs2216039	A	G	A	Hoxd3_MA0912.1	12	1	-	9.772229165665365	10.97898108567023	CAGAGCTAATTATCTT
chr2	40635895	40635896	chr2:40635896:G:T	rs2216038	G	T	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	41040019	41040020	chr2:41040020:G:C	rs150634556	G	C	G	Hoxd3_MA0912.1	15	1	+	8.51649558186952	8.562800149911206	CCGTTCTAATTACCGG
chr2	41127581	41127582	chr2:41127582:A:G	rs11901869	A	G	A	Hoxd3_MA0912.1	0	1	+	10.15934736817098	8.838899572848677	ATGATCTAATTACCTC
chr2	41204231	41204232	chr2:41204232:G:A	rs575636770	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	41650565	41650566	chr2:41650566:C:G	rs10170610	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	41733158	41733159	chr2:41733159:G:A	rs17463117	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	41890301	41890302	chr2:41890302:C:T	rs34726925	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	41922291	41922292	chr2:41922292:G:A	rs573566686	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	41922301	41922302	chr2:41922302:A:G	rs4952386	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	41922303	41922304	chr2:41922304:G:A	rs4952387	G	A	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	42016526	42016527	chr2:42016527:T:A	rs7592119	T	A	A	Hoxd3_MA0912.1	13	1	+	8.425008258690262	8.425008258690262	TAGAACCAATTACTGT
chr2	42171972	42171973	chr2:42171973:C:G	rs923393745	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	42171977	42171978	chr2:42171978:A:G	rs116400752	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	42725939	42725940	chr2:42725940:C:T	rs13421678	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	42725980	42725981	chr2:42725981:G:T	rs4953602	G	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	42935969	42935970	chr2:42935970:T:C	rs17030212	T	C	T	Hoxd3_MA0912.1	9	1	+	7.653600673874793	0.7650282143094325	CTAGGCTAATGACGCT
chr2	42961760	42961761	chr2:42961761:C:T	rs13425902	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	43100843	43100844	chr2:43100844:T:C	rs114734662	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	43350897	43350898	chr2:43350898:G:T	rs11898983	G	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	43360311	43360312	chr2:43360312:G:T	rs3901678	G	T	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	43447214	43447215	chr2:43447215:G:C	rs871852	G	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	43790126	43790127	chr2:43790127:G:A	rs3792019	G	A	A	Hoxd3_MA0912.1	2	1	+	9.306869159487205	7.8570341153301655	TAGTGCTAATTAATAT
chr2	43899232	43899233	chr2:43899233:T:C	rs780007933	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	44110555	44110556	chr2:44110556:G:T	rs76718670	G	T	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	44442767	44442768	chr2:44442768:T:C	rs1067351	T	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	44490918	44490919	chr2:44490919:G:A	rs696596	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	44544395	44544396	chr2:44544396:T:G	rs10170837	T	G	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	44598928	44598929	chr2:44598929:C:T	rs13389981	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	44753979	44753980	chr2:44753980:T:G	rs3738980	T	G	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	44798153	44798154	chr2:44798154:T:C	rs2944596	T	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	44902375	44902376	chr2:44902376:G:A	rs1470524	G	A	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	44927522	44927523	chr2:44927523:C:T	rs504764	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	44927549	44927550	chr2:44927550:C:T	rs504675	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	45015410	45015411	chr2:45015411:C:T	rs10179208	C	T	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	45196147	45196148	chr2:45196148:G:T	rs10196185	G	T	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	45291627	45291628	chr2:45291628:C:G	rs150360615	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	45291629	45291630	chr2:45291630:T:C	rs1862891	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	45333980	45333981	chr2:45333981:C:G	rs17033438	C	G	C	Hoxd3_MA0912.1	3	1	-	7.982523168476282	6.795603250803341	CTAGGTTAATTGAGGT
chr2	45507340	45507341	chr2:45507341:T:A	rs13025877	T	A	A	Hoxd3_MA0912.1	13	1	+	8.760086330681798	8.760086330681798	CTTGGCTAATGACTCT
chr2	45575998	45575999	chr2:45575999:A:G	rs13402828	A	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	45616869	45616870	chr2:45616870:T:G	rs1608305	T	G	T	Hoxd3_MA0912.1	9	1	+	8.373421419989986	3.8827442332229953	ATGATCCAATTACCTC
chr2	45743296	45743297	chr2:45743297:A:G	rs1914312	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	45841767	45841768	chr2:45841768:G:T	rs3896679	G	T	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr2	45962963	45962964	chr2:45962964:A:C	rs72804704	A	C	A	Hoxd3_MA0912.1	10	1	-	8.791458113933162	6.817515747752642	CTGCTTCAATTAAACT
chr2	46118817	46118818	chr2:46118818:G:A	rs17034573	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	46118838	46118839	chr2:46118839:G:A	rs2881260	G	A	A	Hoxd3_MA0912.1	6	1	-	6.693951337551393	8.479877285732387	CTGGGGCCATTGCTCT
chr2	46196307	46196308	chr2:46196308:C:T	rs11694459	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	46223765	46223766	chr2:46223766:C:T	rs11125058	C	T	T	Hoxd3_MA0912.1	14	1	-	9.156803493898394	8.212838164134261	ATAGACTAATTACAGT
chr2	46367162	46367163	chr2:46367163:C:T	rs12994142	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	46481621	46481622	chr2:46481622:C:T	rs113443570	C	T	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	46805557	46805558	chr2:46805558:T:C	rs72882869	T	C	C	Hoxd3_MA0912.1	0	1	+	7.315817848596524	7.263312351218593	TTGAGCTCATGACTGC
chr2	47003019	47003020	chr2:47003020:C:T	rs188286347	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	47035319	47035320	chr2:47035320:C:T	rs72808507	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	47035326	47035327	chr2:47035327:C:A	rs146104630	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	47225486	47225487	chr2:47225487:G:A	rs75648871	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	47249737	47249738	chr2:47249738:A:G	rs12328197	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	47664865	47664866	chr2:47664866:G:A	rs2705767	G	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	48327051	48327052	chr2:48327052:G:A	rs11676168	G	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	48330946	48330947	chr2:48330947:C:T	rs6545030	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	48406859	48406860	chr2:48406860:G:A	rs34035161	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	48525108	48525109	chr2:48525109:T:C	rs62135177	T	C	c	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	48565428	48565429	chr2:48565429:T:C	rs2177489	T	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	48728265	48728266	chr2:48728266:C:T	rs72807949	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	48760788	48760789	chr2:48760789:T:C	rs2956358	T	C	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	48760789	48760790	chr2:48760790:T:G	rs2956357	T	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	48793425	48793426	chr2:48793426:G:A	chr2:48793426:G:A	G	A	G	Hoxd3_MA0912.1	6	1	-	6.921520623347558	8.70744657152855	CTGGAGCAATGACTGC
chr2	48992075	48992076	chr2:48992076:G:A	rs13032037	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	49034009	49034010	chr2:49034010:G:A	rs11694529	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	49320415	49320416	chr2:49320416:T:C	rs11685144	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr2	50086145	50086146	chr2:50086146:G:T	rs2123388	G	T	G	Hoxd3_MA0912.1	15	1	+	9.2415439767301	10.065553113359794	TTGCTTTAATTACATG
chr2	50308803	50308804	chr2:50308804:G:C	rs1217437	G	C	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	50770537	50770538	chr2:50770538:T:G	rs77793440	T	G	T	Hoxd3_MA0912.1	8	1	-	8.413083888040852	3.92240670127386	TAGACCTAATTAATGG
chr2	50944823	50944824	chr2:50944824:G:A	rs968972	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	51403222	51403223	chr2:51403223:T:C	rs62141244	T	C	T	Hoxd3_MA0912.1	7	1	-	7.934631512686383	1.1549482700559546	GTGAGTCAATTAAACC
chr2	51740013	51740014	chr2:51740014:A:G	rs11563087	A	G	A	Hoxd3_MA0912.1	4	1	+	8.439648161623575	9.043884890135951	CTAGAGTAATTGACTT
chr2	51954146	51954147	chr2:51954147:A:G	rs4971578	A	G	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	51954149	51954150	chr2:51954150:G:C	rs77276001	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	52115942	52115943	chr2:52115943:G:T	rs11125406	G	T	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	52614235	52614236	chr2:52614236:C:T	rs72886063	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	52897449	52897450	chr2:52897450:T:C	rs4672065	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	52898029	52898030	chr2:52898030:C:T	rs543654449	C	T	C	Hoxd3_MA0912.1	6	1	+	9.00886984805492	10.794795796235913	TTAGGTCAATTACTGT
chr2	53067172	53067173	chr2:53067173:T:C	rs17189154	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	53087249	53087250	chr2:53087250:G:A	rs55635428	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	53087289	53087290	chr2:53087290:T:C	rs67901982	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	53189179	53189180	chr2:53189180:T:C	rs17044204	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	53311499	53311500	chr2:53311500:T:C	rs993161	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	53517603	53517604	chr2:53517604:G:A	rs59908169	G	A	A	Hoxd3_MA0912.1	2	1	+	9.24433154917543	7.79449650501839	TCGAATTAATTATCCT
chr2	53728351	53728352	chr2:53728352:A:C	rs10201938	A	C	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	53728375	53728376	chr2:53728376:A:C	rs17039525	A	C	A	Hoxd3_MA0912.1	10	1	-	9.656632363182462	7.682689997001942	TAGGCTTAATTACCTT
chr2	54471883	54471884	chr2:54471884:T:C	rs9677271	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	54471922	54471923	chr2:54471923:T:C	rs192685720	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	54559477	54559478	chr2:54559478:C:G	rs12468469	C	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	54613665	54613666	chr2:54613666:A:G	rs62134707	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	54977955	54977956	chr2:54977956:T:C	rs2588520	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	54977987	54977988	chr2:54977988:T:C	rs2588519	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr2	56014855	56014856	chr2:56014856:T:C	rs72813891	T	C	T	Hoxd3_MA0912.1	12	1	-	9.580644833890766	8.613122602951735	TTGATTTAATTGATTT
chr2	56022371	56022372	chr2:56022372:C:G	rs10172790	C	G	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	56396737	56396738	chr2:56396738:G:A	rs112488339	G	A	g	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	56526165	56526166	chr2:56526166:A:G	rs1017268	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	56544499	56544500	chr2:56544500:T:C	rs7605708	T	C	C	Hoxd3_MA0912.1	1	1	-	9.358316981539964	8.500492708165773	CAGAGTTAATTAAAAC
chr2	57942868	57942869	chr2:57942869:T:C	rs1568253	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	58081125	58081126	chr2:58081126:G:T	rs10176942	G	T	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	58240811	58240812	chr2:58240812:A:G	rs1376141532	A	G	A	Hoxd3_MA0912.1	12	1	-	10.280130900275907	11.486882820280771	CTGGGCTAATTATTTT
chr2	59236697	59236698	chr2:59236698:A:G	rs1168305222	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	59585845	59585846	chr2:59585846:C:T	rs536181465	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	59878690	59878691	chr2:59878691:G:C	rs113049808	G	C	G	Hoxd3_MA0912.1	13	1	+	7.62286317028471	9.200941080997792	CAGGCTTAATTAGGCT
chr2	60289591	60289592	chr2:60289592:C:T	rs146803512	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	60366269	60366270	chr2:60366270:G:A	rs173374	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	60412597	60412598	chr2:60412598:T:C	rs17330904	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	61649829	61649830	chr2:61649830:T:C	rs2421332	T	C	T	Hoxd3_MA0912.1	1	1	-	9.259016109934429	8.401191836560239	CAGGTGTAATTAAGGT
chr2	62264854	62264855	chr2:62264855:A:G	rs116734722	A	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	62271076	62271077	chr2:62271077:C:G	rs10203416	C	G	G	Hoxd3_MA0912.1	13	1	+	9.235416203258833	7.65733829254575	TAGGGTTAATTGACCC
chr2	62275408	62275409	chr2:62275409:G:A	rs7604670	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	62287906	62287907	chr2:62287907:G:C	rs112337916	G	C	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	62386157	62386158	chr2:62386158:G:A	rs11125917	G	A	G	Hoxd3_MA0912.1	6	1	-	8.690742861876394	10.476668810057388	ATGATTCAATTACCTC
chr2	62471899	62471900	chr2:62471900:C:T	rs12329137	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	62471945	62471946	chr2:62471946:A:T	rs74440277	A	T	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	63010259	63010260	chr2:63010260:A:T	rs142793321	A	T	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	64525737	64525738	chr2:64525738:A:G	rs7585497	A	G	G	Hoxd3_MA0912.1	5	1	-	10.147213647069048	9.82989220518264	CTGTGTTAATTATATT
chr2	64818164	64818165	chr2:64818165:T:G	rs540374142	T	G	T	Hoxd3_MA0912.1	12	1	-	7.639855102898956	7.639855102898956	CTGAGGCAATGAATGC
chr2	65050055	65050056	chr2:65050056:A:C	rs75532148	A	C	A	Hoxd3_MA0912.1	2	1	-	8.46647155055943	9.783662120110174	ATTAGACAATTACCCT
chr2	65051009	65051010	chr2:65051010:G:C	rs7562809	G	C	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	65181134	65181135	chr2:65181135:G:A	rs62142468	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	65395839	65395840	chr2:65395840:A:G	rs6752083	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	65708712	65708713	chr2:65708713:G:T	rs1023369486	G	T	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	66070869	66070870	chr2:66070870:A:G	rs17541798	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	66496508	66496509	chr2:66496509:C:G	rs114040273	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	66522695	66522696	chr2:66522696:G:A	rs6724747	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	66542021	66542022	chr2:66542022:C:T	rs17625742	C	T	C	Hoxd3_MA0912.1	2	1	-	8.714681133894024	7.264846089736984	CTGTGACAATTACATT
chr2	66570318	66570319	chr2:66570319:T:G	rs764342	T	G	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	66585681	66585682	chr2:66585682:G:A	rs72824835	G	A	G	Hoxd3_MA0912.1	4	1	+	9.146573085959014	8.54233635744664	CTGCGATAATTGACCT
chr2	66585759	66585760	chr2:66585760:G:A	rs17032269	G	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	66898165	66898166	chr2:66898166:T:G	rs3732048	T	G	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	66917760	66917761	chr2:66917761:G:A	rs10496136	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	66962736	66962737	chr2:66962737:G:A	rs373352118	G	A	G	Hoxd3_MA0912.1	13	1	-	6.505425003870556	5.901188275358182	CTGGTCCCATTGCCCT
chr2	67050966	67050967	chr2:67050967:C:T	rs4671770	C	T	T	Hoxd3_MA0912.1	1	1	+	7.1427601661603894	9.22682065369652	GCGAGCTAATTACAGC
chr2	67054911	67054912	chr2:67054912:G:A	rs45544541	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr2	67457959	67457960	chr2:67457960:G:A	rs686880	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	67517125	67517126	chr2:67517126:G:T	rs10490718	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	67568719	67568720	chr2:67568720:T:C	rs2270346	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr2	67776174	67776175	chr2:67776175:T:C	rs17034385	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	67867964	67867965	chr2:67867965:G:A	rs1910370	G	A	G	Hoxd3_MA0912.1	4	1	+	7.664120768397662	7.059884039885288	CAGCGCTCATTACTCT
chr2	67899454	67899455	chr2:67899455:G:A	rs6741065	G	A	g	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	68449264	68449265	chr2:68449265:A:G	rs74861040	A	G	A	Hoxd3_MA0912.1	11	1	+	8.721847561965333	6.935921613784341	CAGTGGTAATTACTGA
chr2	68535942	68535943	chr2:68535943:A:G	rs10172469	A	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr2	68748324	68748325	chr2:68748325:C:T	rs986860809	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	68751801	68751802	chr2:68751802:T:A	rs111708445	T	A	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	68833340	68833341	chr2:68833341:T:C	rs11897827	T	C	T	Hoxd3_MA0912.1	1	1	+	10.085800204000732	8.001739716464602	ATGTATTAATTAATTT
chr2	68877432	68877433	chr2:68877433:C:T	rs71413166	C	T	C	Hoxd3_MA0912.1	2	1	-	9.239117297646233	7.789282253489192	CTGAAATAATTGCACT
chr2	69109464	69109465	chr2:69109465:C:T	rs542643056	C	T	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	69133785	69133786	chr2:69133786:C:A	rs1045165603	C	A	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	69217388	69217389	chr2:69217389:C:T	rs4484064	C	T	T	Hoxd3_MA0912.1	15	1	-	8.974797895035591	8.133799268076375	CAGAAATAATTACACG
chr2	69293125	69293126	chr2:69293126:G:A	rs34570046	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	69704290	69704291	chr2:69704291:G:T	rs11126243	G	T	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	69781359	69781360	chr2:69781360:C:G	rs7590609	C	G	C	Hoxd3_MA0912.1	4	1	-	8.578345272039867	7.000267361326786	ATGGGCTAATTAGAGA
chr2	69814651	69814652	chr2:69814652:A:T	rs4852335	A	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	69945454	69945455	chr2:69945455:G:A	rs6756513	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	69945481	69945482	chr2:69945482:G:A	rs113572551	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr2	70108474	70108475	chr2:70108475:G:A	rs1041266286	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	70108477	70108478	chr2:70108478:C:G	rs117523701	C	G	C	Hoxd3_MA0912.1	0	1	+	9.72919028021847	7.744813850335362	CTGAGTTAATTGGTCT
chr2	70108840	70108841	chr2:70108841:G:C	rs7601899	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	70133373	70133374	chr2:70133374:T:C	rs11890741	T	C	T	Hoxd3_MA0912.1	10	1	+	8.777452716419392	1.9977694737889635	TAAGATTAATTAGCCT
chr2	70248547	70248548	chr2:70248548:C:T	rs141564047	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	70248566	70248567	chr2:70248567:G:A	rs72841155	G	A	G	Hoxd3_MA0912.1	13	1	-	8.10237017126134	7.498133442748968	TTAGTGTAATTGCCGC
chr2	70248583	70248584	chr2:70248584:G:A	rs182334340	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	70248587	70248588	chr2:70248588:G:C	rs187388474	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	70248595	70248596	chr2:70248596:G:A	rs111759046	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	70432237	70432238	chr2:70432238:A:G	rs1667110	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	70585041	70585042	chr2:70585042:T:A	rs425064	T	A	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	70749242	70749243	chr2:70749243:A:G	rs10202903	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	70752265	70752266	chr2:70752266:C:G	rs11685412	C	G	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	70776441	70776442	chr2:70776442:A:G	rs10194200	A	G	g	Hoxd3_MA0912.1	2	1	+	9.508730053290183	10.958565097447222	CTAAGCTAATTATACT
chr2	70900024	70900025	chr2:70900025:G:A	rs2234491	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	71067127	71067128	chr2:71067128:G:A	rs71414877	G	A	.	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	71240840	71240841	chr2:71240841:G:A	rs6713034	G	A	g	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	71306892	71306893	chr2:71306893:C:T	rs1032581932	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	71547250	71547251	chr2:71547251:A:G	rs80223134	A	G	A	Hoxd3_MA0912.1	4	1	+	7.253641071570447	7.8578778000828216	CAGGAGTCATTGACCT
chr2	71560680	71560681	chr2:71560681:T:G	chr2:71560681:T:G	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	71605884	71605885	chr2:71605885:A:G	rs7586988	A	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	71607888	71607889	chr2:71607889:T:C	rs74736234	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	71766592	71766593	chr2:71766593:C:T	rs13033431	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	71780551	71780552	chr2:71780552:G:C	rs12713762	G	C	g	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	71832578	71832579	chr2:71832579:A:G	rs148461272	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	71949253	71949254	chr2:71949254:A:T	rs145996786	A	T	A	Hoxd3_MA0912.1	2	1	-	8.296755678771385	8.16411120416509	CTTGTTTAATGACTGT
chr2	71992345	71992346	chr2:71992346:C:A	rs17007663	C	A	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	72134011	72134012	chr2:72134012:G:C	rs140598229	G	C	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	72290166	72290167	chr2:72290167:C:G	rs10207299	C	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	72576978	72576979	chr2:72576979:T:C	rs537851898	T	C	T	Hoxd3_MA0912.1	3	1	-	8.777727172841958	8.663629421802934	TTCATTTCATTAACCT
chr2	72984008	72984009	chr2:72984009:G:A	rs6760425	G	A	G	Hoxd3_MA0912.1	3	1	-	8.040041787979515	8.776723010559186	CTCCGTTAATTGACGT
chr2	73091983	73091984	chr2:73091984:T:G	rs6727919	T	G	G	Hoxd3_MA0912.1	8	1	-	8.19101265188547	3.7003354651184788	CTGTCTCAATTAGCCT
chr2	73175674	73175675	chr2:73175675:C:G	rs111410687	C	G	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr2	73230423	73230424	chr2:73230424:C:T	rs2288630	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	74121669	74121670	chr2:74121670:G:A	rs1667615	G	A	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	74290552	74290553	chr2:74290553:A:G	rs3755439	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	74392203	74392204	chr2:74392204:T:C	rs1039209891	T	C	T	Hoxd3_MA0912.1	11	1	-	9.058895447966826	7.272969499785832	TTGTTTTAATTAGCAG
chr2	74392231	74392232	chr2:74392232:C:A	rs183531560	C	A	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	74645685	74645686	chr2:74645686:T:C	rs57326441	T	C	T	Hoxd3_MA0912.1	1	1	-	8.699483487769903	7.841659214395712	CAGTTTTAATTACATG
chr2	74760130	74760131	chr2:74760131:A:C	rs3911278	A	C	A	Hoxd3_MA0912.1	8	1	+	9.120874691206016	4.630197504439025	TTGCTGTAATTATCCC
chr2	74840349	74840350	chr2:74840350:G:A	rs74556650	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr2	75024045	75024046	chr2:75024046:A:G	rs188549617	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	75100554	75100555	chr2:75100555:G:A	rs17010738	G	A	G	Hoxd3_MA0912.1	5	1	+	8.81514003690597	8.090576660112646	CTGTGGTAATGAATGG
chr2	75155264	75155265	chr2:75155265:T:C	rs3755468	T	C	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	75162282	75162283	chr2:75162283:T:C	rs12713833	T	C	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	75231551	75231552	chr2:75231552:G:T	rs1158816	G	T	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	75686468	75686469	chr2:75686469:A:G	rs13391581	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	75964795	75964796	chr2:75964796:G:A	rs4411722	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	76556210	76556211	chr2:76556211:G:A	rs10865424	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	77005593	77005594	chr2:77005594:T:C	rs4853288	T	C	T	Hoxd3_MA0912.1	0	1	-	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr2	77009250	77009251	chr2:77009251:T:A	rs7604936	T	A	T	Hoxd3_MA0912.1	13	1	+	9.277885890887791	9.277885890887791	TTCTTGTAATTACTGT
chr2	77147378	77147379	chr2:77147379:G:A	rs187285383	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	77297001	77297002	chr2:77297002:T:C	rs141773758	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	78309696	78309697	chr2:78309697:C:A	rs57127297	C	A	C	Hoxd3_MA0912.1	3	1	+	7.92003081865804	9.221048487370004	TTGCGTTCATTACCAG
chr2	78780274	78780275	chr2:78780275:C:T	rs74614141	C	T	C	Hoxd3_MA0912.1	2	1	-	9.528139336512835	8.078304292355796	CTGTTTTAATTGCACT
chr2	79005055	79005056	chr2:79005056:C:T	rs13031947	C	T	T	Hoxd3_MA0912.1	0	1	+	10.699164041644545	10.751669539022476	CTCATTTAATTACCCT
chr2	79191360	79191361	chr2:79191361:C:T	rs11126702	C	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	79191375	79191376	chr2:79191376:G:A	rs17016486	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	79223938	79223939	chr2:79223939:C:T	rs1434197	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	79918481	79918482	chr2:79918482:T:C	rs2916522	T	C	T	Hoxd3_MA0912.1	0	1	-	8.34232412479616	7.021876329473857	ATGGTTTCATTAACTG
chr2	79936592	79936593	chr2:79936593:G:A	rs115554025	G	A	G	Hoxd3_MA0912.1	3	1	+	9.38781121814	9.501908969179024	CAGGCTTAATTAAAGT
chr2	79946371	79946372	chr2:79946372:C:T	rs11897837	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	79946378	79946379	chr2:79946379:T:C	rs1349310996	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	81703356	81703357	chr2:81703357:G:C	rs1344969	G	C	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	82672918	82672919	chr2:82672919:A:G	rs12052614	A	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	82848578	82848579	chr2:82848579:T:C	rs10183749	T	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	82893241	82893242	chr2:82893242:C:T	rs1833276	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	82994010	82994011	chr2:82994011:A:T	rs10496280	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	83007308	83007309	chr2:83007309:A:C	rs62146758	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	83283742	83283743	chr2:83283743:A:C	rs6547477	A	C	A	Hoxd3_MA0912.1	1	1	+	7.931746427013033	7.073922153638842	CAATGGTAATTGCCCT
chr2	83370435	83370436	chr2:83370436:T:G	rs11126912	T	G	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	83730715	83730716	chr2:83730716:G:C	rs62154641	G	C	T	Hoxd3_MA0912.1	14	1	+	8.994172490888374	9.170587856172823	TTAAGGTAATTGCAGT
chr2	84459477	84459478	chr2:84459478:C:G	chr2:84459478:C:G	C	G	C	Hoxd3_MA0912.1	14	1	-	10.284291434410486	10.460706799694934	CTGTTATAATTAATGT
chr2	84459485	84459486	chr2:84459486:A:G	rs72830154	A	G	A	Hoxd3_MA0912.1	6	1	-	10.284291434410486	8.498365486229494	CTGTTATAATTAATGT
chr2	85012748	85012749	chr2:85012749:A:G	rs75958352	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	85137183	85137184	chr2:85137184:T:G	rs72838189	T	G	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	85151770	85151771	chr2:85151771:C:A	rs2583539	C	A	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	85342255	85342256	chr2:85342256:C:T	rs15413	C	T	C	Hoxd3_MA0912.1	13	1	+	10.152943082509378	9.548706353997003	ATGTGCTAATTAACTG
chr2	85441864	85441865	chr2:85441865:A:G	rs11682343	A	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	85576418	85576419	chr2:85576419:T:C	rs6757263	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	85980742	85980743	chr2:85980743:T:G	rs76440811	T	G	T	Hoxd3_MA0912.1	12	1	-	7.929723084276272	7.929723084276272	ATGAGGCAATTAAGGG
chr2	86026384	86026385	chr2:86026385:A:T	rs12124	A	T	T	Hoxd3_MA0912.1	7	1	+	8.217139570773643	1.437456328143215	TGATGTTAATTACCCG
chr2	86083020	86083021	chr2:86083021:T:C	rs114470263	T	C	T	Hoxd3_MA0912.1	8	1	-	9.299572331644534	2.410999872079172	CTGGACTCATTAACCC
chr2	86453738	86453739	chr2:86453739:T:A	rs72930362	T	A	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	86828125	86828126	chr2:86828126:A:G	rs6749703	A	G	a	Hoxd3_MA0912.1	3	1	-	8.51527411012878	7.778592887549107	TTATGTCAATTAACCG
chr2	87469850	87469851	chr2:87469851:G:A	rs867261739	G	A	G	Hoxd3_MA0912.1	15	1	-	10.271544771597341	11.04924934018535	TTGAACTAATTACATC
chr2	88038619	88038620	chr2:88038620:G:A	rs561469906	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	88231055	88231056	chr2:88231056:A:C	rs79992736	A	C	C	Hoxd3_MA0912.1	1	1	-	9.47982563741587	7.395765149879737	TTGTGGTAATTAAGTG
chr2	88937332	88937333	chr2:88937333:A:G	rs59405926	A	G	.	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	96164428	96164429	chr2:96164429:C:T	rs13401784	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	96538767	96538768	chr2:96538768:G:A	chr2:96538768:G:A	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	96538820	96538821	chr2:96538821:C:A	rs577153663	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	96818927	96818928	chr2:96818928:C:T	rs116350930	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	98351351	98351352	chr2:98351352:G:A	rs13432099	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	98631356	98631357	chr2:98631357:T:G	rs7560357	T	G	G	Hoxd3_MA0912.1	11	1	-	6.9169986022701675	0.17236243285783803	CAGGGCTCATGACCTT
chr2	98643314	98643315	chr2:98643315:T:C	rs72825732	T	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	98838814	98838815	chr2:98838815:A:G	rs72811073	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	101064212	101064213	chr2:101064213:G:A	rs13426867	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	101161477	101161478	chr2:101161478:T:C	rs56380439	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr2	101309125	101309126	chr2:101309126:A:G	rs79975603	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	101418896	101418897	chr2:101418897:G:A	rs75516500	G	A	G	Hoxd3_MA0912.1	13	1	-	7.205629454009424	6.601392725497051	CTGATGTCATTGCCTG
chr2	101432195	101432196	chr2:101432196:C:T	rs12712099	C	T	T	Hoxd3_MA0912.1	3	1	-	8.031406968571355	8.14550471961038	ATGGTCTCATTAAACC
chr2	101432207	101432208	chr2:101432208:T:C	rs13430896	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	101451819	101451820	chr2:101451820:G:A	rs7598326	G	A	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	101460637	101460638	chr2:101460638:G:A	rs11674781	G	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	101600195	101600196	chr2:101600196:C:T	rs59932255	C	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	101655040	101655041	chr2:101655041:A:G	rs117467171	A	G	A	Hoxd3_MA0912.1	9	1	-	10.854667884739023	3.9660954251736604	TTTAGTTAATTAGCCT
chr2	101656434	101656435	chr2:101656435:T:C	rs10205340	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	101661172	101661173	chr2:101661173:C:G	rs7584536	C	G	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	101674366	101674367	chr2:101674367:A:G	rs1509498	A	G	G	Hoxd3_MA0912.1	11	1	+	7.986361391777202	6.2004354435962075	CCTAACTAATTACCCC
chr2	102029485	102029486	chr2:102029486:C:A	rs115815090	C	A	c	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	102138348	102138349	chr2:102138349:G:C	rs6706048	G	C	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	102237593	102237594	chr2:102237594:C:T	rs7583215	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	102344024	102344025	chr2:102344025:A:G	rs13001714	A	G	a	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	102344026	102344027	chr2:102344027:T:C	rs13007174	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	102441207	102441208	chr2:102441208:G:A	rs11465700	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	102593761	102593762	chr2:102593762:T:C	rs7573475	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	105199673	105199674	chr2:105199674:G:C	rs2576782	G	C	G	Hoxd3_MA0912.1	15	1	-	8.690742861876394	8.644438293834709	ATGATTCAATTACCTC
chr2	105381378	105381379	chr2:105381379:G:A	rs57798755	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	105381382	105381383	chr2:105381383:G:C	rs57919778	G	C	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr2	105485960	105485961	chr2:105485961:C:T	rs116362644	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	105507028	105507029	chr2:105507029:C:A	rs113299159	C	A	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	105604056	105604057	chr2:105604057:G:A	rs2889524	G	A	G	Hoxd3_MA0912.1	12	1	-	9.554414466556954	8.347662546552092	TAGACTTAATTACAGT
chr2	105769656	105769657	chr2:105769657:G:A	rs114466993	G	A	G	Hoxd3_MA0912.1	14	1	+	10.431879369309614	9.487914039545482	ATGGGGTAATTAGAGT
chr2	105786111	105786112	chr2:105786112:T:C	rs35866817	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	105906471	105906472	chr2:105906472:A:G	rs6731173	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	106002953	106002954	chr2:106002954:G:T	rs1615276	G	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	106160938	106160939	chr2:106160939:T:C	rs34646608	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	106543542	106543543	chr2:106543543:T:A	rs13004386	T	A	-	Hoxd3_MA0912.1	11	1	-	9.935282461481991	5.59759140038795	TTTGTTTAATTAATTT
chr2	106614612	106614613	chr2:106614613:A:G	rs10165741	A	G	N	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	107062779	107062780	chr2:107062780:G:A	rs2030674	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	107203060	107203061	chr2:107203061:G:A	rs4676110	G	A	G	Hoxd3_MA0912.1	14	1	+	8.586935906421054	7.642970576656921	TTGACTTAATGACCGG
chr2	107585522	107585523	chr2:107585523:C:T	rs62158800	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	107809352	107809353	chr2:107809353:G:A	rs17269251	G	A	G	Hoxd3_MA0912.1	15	1	+	8.579357772321242	7.7383591453620255	TTTGGCTAATTATAGG
chr2	108232924	108232925	chr2:108232925:T:C	rs2378098	T	C	N	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	108315923	108315924	chr2:108315924:C:G	rs112958189	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	108450075	108450076	chr2:108450076:T:C	rs76428482	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	108855644	108855645	chr2:108855645:A:G	rs12464296	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	109275786	109275787	chr2:109275787:C:G	rs7563645	C	G	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	109285388	109285389	chr2:109285389:C:T	rs148254004	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	109439502	109439503	chr2:109439503:C:T	rs75026194	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	109663922	109663923	chr2:109663923:T:A	rs146728244	T	A	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	109729868	109729869	chr2:109729869:G:A	rs2019422	G	A	.	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	110927007	110927008	chr2:110927008:A:G	rs11903297	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	111313010	111313011	chr2:111313011:G:A	rs184662208	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	111710848	111710849	chr2:111710849:G:C	rs11683033	G	C	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	111746407	111746408	chr2:111746408:C:T	rs183463439	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	111880939	111880940	chr2:111880940:G:C	rs4132166	G	C	g	Hoxd3_MA0912.1	20	0	-	0	0	.
chr2	111884792	111884793	chr2:111884793:A:C	rs6707762	A	C	N	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	112251545	112251546	chr2:112251546:C:T	rs143048321	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	112547572	112547573	chr2:112547573:G:C	rs11123139	G	C	C	Hoxd3_MA0912.1	10	1	+	7.179399086675614	2.373658210225706	CAGAGGTAATGACGGG
chr2	112547574	112547575	chr2:112547575:C:T	rs78234807	C	T	C	Hoxd3_MA0912.1	12	1	+	7.179399086675614	5.97264716667075	CAGAGGTAATGACGGG
chr2	113056773	113056774	chr2:113056774:C:T	rs9677469	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	113285782	113285783	chr2:113285783:T:G	rs4848328	T	G	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr2	113288980	113288981	chr2:113288981:G:A	rs11123176	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	113345136	113345137	chr2:113345137:A:G	rs6542128	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	113690939	113690940	chr2:113690940:T:C	rs1597247	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	113819421	113819422	chr2:113819422:C:G	rs62170146	C	G	C	Hoxd3_MA0912.1	5	1	+	9.185506185970272	9.37403251965111	ATGACCTAATTACCTC
chr2	114129014	114129015	chr2:114129015:G:A	rs11681925	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	114134339	114134340	chr2:114134340:T:G	rs3892912	T	G	t	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	114461498	114461499	chr2:114461499:C:T	rs57006859	C	T	C	Hoxd3_MA0912.1	5	1	+	7.628394420638115	7.945715862524521	CTCAACCAATTAGCCT
chr2	114790126	114790127	chr2:114790127:C:A	rs2574111	C	A	a	Hoxd3_MA0912.1	2	1	-	9.350837903801358	8.033647334250613	TTGCAGTAATTAAGGT
chr2	115125202	115125203	chr2:115125203:A:T	rs10496485	A	T	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	115390283	115390284	chr2:115390284:C:T	rs369543045	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	118035007	118035008	chr2:118035008:T:C	rs80006012	T	C	T	Hoxd3_MA0912.1	10	1	+	9.255079308008686	2.4753960653782587	ATGATTCAATTACCCC
chr2	118055479	118055480	chr2:118055480:T:C	rs7589590	T	C	C	Hoxd3_MA0912.1	14	1	+	9.434086968548003	9.998423414680294	TAGAGGCAATTACCTT
chr2	118080704	118080705	chr2:118080705:A:G	rs2161830	A	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	118132043	118132044	chr2:118132044:G:T	rs72839639	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	118496056	118496057	chr2:118496057:A:G	rs17773745	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	118823862	118823863	chr2:118823863:G:A	rs11690226	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	119182008	119182009	chr2:119182009:G:T	rs6715243	G	T	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	119400430	119400431	chr2:119400431:C:G	rs2422464	C	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	119782890	119782891	chr2:119782891:A:G	rs12469317	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	120560970	120560971	chr2:120560971:G:A	rs35982483	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	120684021	120684022	chr2:120684022:A:G	rs62167009	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	120713896	120713897	chr2:120713897:C:T	rs75914160	C	T	C	Hoxd3_MA0912.1	15	1	+	10.823276002731786	11.600980571319795	CTGAGCTAATTACATC
chr2	120743641	120743642	chr2:120743642:A:C	rs707484	A	C	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr2	120934900	120934901	chr2:120934901:A:G	rs2166565	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	121039857	121039858	chr2:121039858:T:C	rs2592605	T	C	C	Hoxd3_MA0912.1	3	1	-	8.844342956683025	8.730245205644003	ATGAGTTAATGAAAGG
chr2	121260913	121260914	chr2:121260914:T:A	rs74902675	T	A	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	121323639	121323640	chr2:121323640:G:A	rs2580374	G	A	-	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	121335904	121335905	chr2:121335905:A:G	rs13384226	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	121530817	121530818	chr2:121530818:A:G	rs139670629	A	G	A	Hoxd3_MA0912.1	10	1	-	10.499971387658263	3.7202881450278356	TTGTGGTAATTAATTC
chr2	121530830	121530831	chr2:121530831:C:G	rs72969386	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	121530838	121530839	chr2:121530839:T:C	rs79645684	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	121955980	121955981	chr2:121955981:A:G	rs17007049	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	122428789	122428790	chr2:122428790:C:T	rs12611449	C	T	C	Hoxd3_MA0912.1	4	1	-	10.089280494901098	9.485043766388724	TTTTGTTAATTACATT
chr2	122707602	122707603	chr2:122707603:T:C	rs72974470	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	122816960	122816961	chr2:122816961:C:A	chr2:122816961:C:A	C	A	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	122926587	122926588	chr2:122926588:T:C	rs1518223	T	C	N	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	123041839	123041840	chr2:123041840:G:A	rs17465431	G	A	G	Hoxd3_MA0912.1	14	1	+	8.062276342748047	7.118311012983915	TTGAGGTCATGAACGG
chr2	123129296	123129297	chr2:123129297:A:C	rs73951617	A	C	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	123332919	123332920	chr2:123332920:C:A	rs1607512	C	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	123332954	123332955	chr2:123332955:C:T	rs1607513	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	124002196	124002197	chr2:124002197:A:C	rs17269066	A	C	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr2	124032993	124032994	chr2:124032994:G:C	rs1213971	G	C	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr2	124201913	124201914	chr2:124201914:T:C	rs7558767	T	C	T	Hoxd3_MA0912.1	3	1	+	7.79759972690508	7.0609185043254055	CTCTGTTCATTAGCCT
chr2	124214470	124214471	chr2:124214471:C:T	rs11679566	C	T	C	Hoxd3_MA0912.1	3	1	+	9.816431356873274	10.553112579452947	TTGCGATAATTACTTT
chr2	124546912	124546913	chr2:124546913:T:C	rs1504010	T	C	T	Hoxd3_MA0912.1	12	1	+	10.418944834709167	11.625696754714031	TTGAAGTAATTATTGT
chr2	124551479	124551480	chr2:124551480:G:A	rs2047876	G	A	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	124551515	124551516	chr2:124551516:G:A	rs10185849	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	124573548	124573549	chr2:124573549:T:C	rs10445861	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	124646325	124646326	chr2:124646326:C:T	rs9646915	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	125581651	125581652	chr2:125581652:T:C	rs1839995	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	125788303	125788304	chr2:125788304:C:T	rs35082373	C	T	C	Hoxd3_MA0912.1	12	1	+	8.287797158741029	7.081045238736165	GTGCAGTAATTACAGT
chr2	125822957	125822958	chr2:125822958:G:A	rs72967650	G	A	G	Hoxd3_MA0912.1	12	1	-	9.27004853718826	8.063296617183394	CTTATCTAATTACGCT
chr2	126204863	126204864	chr2:126204864:G:A	rs1484448	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	126254135	126254136	chr2:126254136:C:T	rs567888307	C	T	C	Hoxd3_MA0912.1	7	1	+	8.783428365108326	3.977687488658419	CTGGGCTCATTACCAC
chr2	126461337	126461338	chr2:126461338:T:C	rs10928857	T	C	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr2	126706375	126706376	chr2:126706376:G:A	rs10187088	G	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	126771835	126771836	chr2:126771836:T:C	rs7599977	T	C	T	Hoxd3_MA0912.1	9	1	+	7.139724182566486	0.2511517230011222	CTGGGGCAATGACCAG
chr2	126777354	126777355	chr2:126777355:C:G	chr2:126777355:C:G	C	G	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	126997820	126997821	chr2:126997821:A:G	rs13031414	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	127146666	127146667	chr2:127146667:T:C	rs17014993	T	C	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	127382930	127382931	chr2:127382931:T:G	rs544045418	T	G	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	127616124	127616125	chr2:127616125:G:A	rs13386395	G	A	G	Hoxd3_MA0912.1	14	1	+	10.753972430766574	9.81000710100244	TTTGGTTAATTACCGC
chr2	127773007	127773008	chr2:127773008:C:T	rs191596098	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	128425131	128425132	chr2:128425132:C:T	rs183144821	C	T	C	Hoxd3_MA0912.1	1	1	+	7.819563946840889	9.903624434377019	ACGGGCTAATTAGCAT
chr2	128456443	128456444	chr2:128456444:G:A	rs72847815	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	128487972	128487973	chr2:128487973:A:G	rs705055	A	G	G	Hoxd3_MA0912.1	6	1	-	10.14033456790982	8.354408619728826	TAGATTTAATTAAATT
chr2	128565657	128565658	chr2:128565658:T:C	rs841299	T	C	C	Hoxd3_MA0912.1	9	1	+	6.143940745795396	-0.7446317137699661	CTGGGCCCATGAACCC
chr2	128668420	128668421	chr2:128668421:C:T	rs10195969	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	128704962	128704963	chr2:128704963:C:T	rs116786543	C	T	-	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	129558449	129558450	chr2:129558450:C:T	rs2003288	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	130143071	130143072	chr2:130143072:C:T	rs143091910	C	T	.	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	131003817	131003818	chr2:131003818:T:A	rs74631871	T	A	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	131479389	131479390	chr2:131479390:C:T	rs72992284	C	T	C	Hoxd3_MA0912.1	5	1	-	8.45449126746181	7.729927890668487	CTGGCGTAATTATTGG
chr2	131722588	131722589	chr2:131722589:A:T	rs193158558	A	T	.	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	132582989	132582990	chr2:132582990:A:C	rs77162764	A	C	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	132615586	132615587	chr2:132615587:G:A	rs74949772	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	132768044	132768045	chr2:132768045:G:C	rs57643329	G	C	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr2	133691255	133691256	chr2:133691256:C:T	rs34969545	C	T	C	Hoxd3_MA0912.1	5	1	+	9.086331903443739	9.403653345330147	TAGCACTAATTAATCT
chr2	133946455	133946456	chr2:133946456:T:C	rs7560215	T	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	133994265	133994266	chr2:133994266:C:T	rs7571211	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	134257113	134257114	chr2:134257114:T:C	rs1257218	T	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	134462066	134462067	chr2:134462067:G:A	rs62168961	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	134558971	134558972	chr2:134558972:C:T	rs76252294	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	134670660	134670661	chr2:134670661:G:A	rs530312745	G	A	G	Hoxd3_MA0912.1	15	1	-	9.237254717399109	10.014959285987118	CTGAGCTCATTAATGC
chr2	134762693	134762694	chr2:134762694:A:G	rs1942040	A	G	G	Hoxd3_MA0912.1	15	1	-	7.775206985515341	6.997502416927333	CTGGGCTCATTGCCAT
chr2	135897117	135897118	chr2:135897118:C:A	chr2:135897118:C:A	C	A	C	Hoxd3_MA0912.1	5	1	-	9.612668192657361	9.741463300862932	TTGTGGTAATTAAATA
chr2	136255954	136255955	chr2:136255955:C:T	rs4954592	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	136328536	136328537	chr2:136328537:C:T	rs4073037	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	136390976	136390977	chr2:136390977:A:G	rs6430635	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr2	136864776	136864777	chr2:136864777:C:T	rs1649569	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	136901911	136901912	chr2:136901912:G:A	rs536587	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	136973724	136973725	chr2:136973725:G:T	rs2217415	G	T	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	137020942	137020943	chr2:137020943:T:C	rs13422653	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	137835364	137835365	chr2:137835365:G:A	rs10496790	G	A	G	Hoxd3_MA0912.1	14	1	+	10.42469607837101	9.480730748606877	CTTTATTAATTAACGT
chr2	138016825	138016826	chr2:138016826:G:A	rs146940234	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	138344437	138344438	chr2:138344438:T:C	rs78770686	T	C	T	Hoxd3_MA0912.1	2	1	+	10.110322161693416	9.644038313550212	CTTTGCTAATTAACCC
chr2	138443660	138443661	chr2:138443661:A:G	rs140636464	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr2	138494386	138494387	chr2:138494387:T:C	rs11691283	T	C	T	Hoxd3_MA0912.1	10	1	+	9.453395149998764	2.673711907368337	CTGGGGTAATTGCTGG
chr2	138637433	138637434	chr2:138637434:T:G	rs13407238	T	G	T	Hoxd3_MA0912.1	3	1	-	7.815453282430296	6.514435613718332	CACAGCTAATTACCAG
chr2	138839068	138839069	chr2:138839069:T:C	rs6430810	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	138964442	138964443	chr2:138964443:C:A	rs1485087	C	A	C	Hoxd3_MA0912.1	5	1	+	10.783375720351703	10.247338677239217	CTGAACTAATTACACC
chr2	139492252	139492253	chr2:139492253:G:A	rs1348767	G	A	G	Hoxd3_MA0912.1	5	1	+	10.25536917021079	9.530805793417466	GTGGTGTAATTAACCT
chr2	139787321	139787322	chr2:139787322:G:A	rs12987762	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	139893759	139893760	chr2:139893760:G:A	rs6722928	G	A	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	140275424	140275425	chr2:140275425:C:T	rs2839772	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	140539042	140539043	chr2:140539043:T:C	rs1905925	T	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	140604780	140604781	chr2:140604781:C:T	rs76110620	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	141063053	141063054	chr2:141063054:A:G	rs7597913	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	142064462	142064463	chr2:142064463:A:C	rs181932680	A	C	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	142981793	142981794	chr2:142981794:A:G	rs6756643	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	142994050	142994051	chr2:142994051:G:T	rs352874	G	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	143205447	143205448	chr2:143205448:C:T	rs918346970	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	143476682	143476683	chr2:143476683:A:G	rs34657736	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	144404334	144404335	chr2:144404335:A:G	rs13009259	A	G	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	144497394	144497395	chr2:144497395:G:C	rs16823815	G	C	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	144865629	144865630	chr2:144865630:G:C	rs11682590	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	144946487	144946488	chr2:144946488:C:T	rs10201023	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	146165479	146165480	chr2:146165480:T:C	rs1991166	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	146315798	146315799	chr2:146315799:T:C	rs74368883	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	146998426	146998427	chr2:146998427:C:T	rs13386983	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	147070093	147070094	chr2:147070094:G:A	rs78054668	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	148566400	148566401	chr2:148566401:A:G	rs4972374	A	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	148619558	148619559	chr2:148619559:A:T	rs114759108	A	T	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	148645515	148645516	chr2:148645516:C:T	rs570936248	C	T	C	Hoxd3_MA0912.1	0	1	+	8.966734276962788	9.019239774340718	CGGGGCTAATTAATGG
chr2	148969369	148969370	chr2:148969370:A:G	rs111578300	A	G	A	Hoxd3_MA0912.1	4	1	-	10.563270690838692	9.589429508637984	CAGATGTAATTACCTT
chr2	149057412	149057413	chr2:149057413:C:A	rs1917583	C	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	149064665	149064666	chr2:149064666:C:T	rs13031038	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	149147356	149147357	chr2:149147357:T:C	rs540187	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	149169307	149169308	chr2:149169308:G:T	rs34526806	G	T	G	Hoxd3_MA0912.1	13	1	-	10.701809420629472	10.097572692117097	TTTAGTTAATTAACAT
chr2	149278654	149278655	chr2:149278655:T:C	rs17601624	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	149278699	149278700	chr2:149278700:T:C	rs10931076	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	149606131	149606132	chr2:149606132:G:A	rs76749690	G	A	G	Hoxd3_MA0912.1	13	1	-	9.17267999834152	8.568443269829146	CTAGGTCAATTAACTT
chr2	149606154	149606155	chr2:149606155:T:C	rs114900731	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	150235021	150235022	chr2:150235022:T:C	rs78262168	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	150283376	150283377	chr2:150283377:C:T	rs4425094	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	151197790	151197791	chr2:151197791:T:C	rs11690634	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	152039004	152039005	chr2:152039005:T:G	rs12465272	T	G	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	152226300	152226301	chr2:152226301:C:T	rs6433920	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	152395763	152395764	chr2:152395764:C:T	rs78254888	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	152586729	152586730	chr2:152586730:T:C	rs73008193	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr2	153100393	153100394	chr2:153100394:C:T	rs35772752	C	T	C	Hoxd3_MA0912.1	15	1	+	9.569250474586152	10.34695504317416	CAGATGTAATTACAGC
chr2	153223327	153223328	chr2:153223328:T:C	rs13021536	T	C	T	Hoxd3_MA0912.1	4	1	+	9.669195954639365	8.695354772438657	TTGATCTAATTAATAG
chr2	154402138	154402139	chr2:154402139:G:A	rs34287563	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	154450239	154450240	chr2:154450240:A:T	rs707079	A	T	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	155116045	155116046	chr2:155116046:T:C	rs34860921	T	C	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	155264039	155264040	chr2:155264040:A:G	rs13423400	A	G	.	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	155335377	155335378	chr2:155335378:G:A	rs1486065	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	155369169	155369170	chr2:155369170:A:C	rs1170312634	A	C	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	155708292	155708293	chr2:155708293:C:T	rs1914648	C	T	T	Hoxd3_MA0912.1	14	1	-	9.34913030381365	8.405164974049518	TTGGTCTAATGAAAGT
chr2	155840583	155840584	chr2:155840584:A:G	rs10497151	A	G	A	Hoxd3_MA0912.1	1	1	-	10.97190205403254	8.887841566496409	CTGATGTAATTAATCC
chr2	156425563	156425564	chr2:156425564:A:G	rs298289	A	G	A	Hoxd3_MA0912.1	1	1	-	12.30917061926286	10.225110131726728	CTGAGTTAATTAACCC
chr2	156589237	156589238	chr2:156589238:G:A	rs1368248	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr2	156651319	156651320	chr2:156651320:C:T	rs114761677	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	156664377	156664378	chr2:156664378:T:C	rs62178502	T	C	T	Hoxd3_MA0912.1	6	1	+	9.555643405350159	7.7697174571691665	TTTTACTAATTAAAGT
chr2	157783670	157783671	chr2:157783671:C:T	rs568121124	C	T	c	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	158061105	158061106	chr2:158061106:G:T	chr2:158061106:G:T	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr2	158202247	158202248	chr2:158202248:C:T	rs56209587	C	T	T	Hoxd3_MA0912.1	13	1	+	9.630151835735067	9.025915107222692	CAAAATTAATTAACGT
chr2	158202248	158202249	chr2:158202249:G:A	rs78167952	G	A	G	Hoxd3_MA0912.1	14	1	+	9.630151835735067	8.686186505970934	CAAAATTAATTAACGT
chr2	158483525	158483526	chr2:158483526:C:T	rs1125843	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	158656137	158656138	chr2:158656138:A:G	rs2528585	A	G	G	Hoxd3_MA0912.1	12	1	+	7.7605300154913515	6.793007784552321	CTGAGTCAATTGAGGT
chr2	158723512	158723513	chr2:158723513:C:T	rs112641615	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	158935781	158935782	chr2:158935782:T:G	rs57557476	T	G	T	Hoxd3_MA0912.1	15	1	-	8.719778461662546	9.607081656663448	TTGAGTTAATGACAGA
chr2	158968190	158968191	chr2:158968191:C:G	rs72953161	C	G	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	159202264	159202265	chr2:159202265:T:C	rs10175176	T	C	T	Hoxd3_MA0912.1	15	1	+	8.546354779692534	7.768650211104525	CTGAGTCAATGAATGT
chr2	159287560	159287561	chr2:159287561:G:A	rs6727130	G	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	159426271	159426272	chr2:159426272:A:G	rs3755436	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	159718714	159718715	chr2:159718715:A:G	rs17813538	A	G	A	Hoxd3_MA0912.1	10	1	-	8.084085702822785	1.3044024601923565	TTCTACCAATTACCCT
chr2	159736377	159736378	chr2:159736378:C:T	rs77363656	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr2	159884042	159884043	chr2:159884043:A:T	rs111552738	A	T	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	160097322	160097323	chr2:160097323:A:T	rs4129786	A	T	T	Hoxd3_MA0912.1	14	1	-	7.968046336978025	7.412002088061735	TTGGTGTCATTGACTT
chr2	160097352	160097353	chr2:160097353:G:A	rs12477682	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	160253190	160253191	chr2:160253191:A:T	rs72623120	A	T	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	160924837	160924838	chr2:160924838:G:A	rs4108566	G	A	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	161031185	161031186	chr2:161031186:G:T	rs72874211	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	161998307	161998308	chr2:161998308:G:A	rs2909445	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	162262151	162262152	chr2:162262152:A:G	chr2:162262152:A:G	A	G	A	Hoxd3_MA0912.1	14	1	+	8.201086753954154	9.145052083718287	CTGGGATAATGAACAG
chr2	162582762	162582763	chr2:162582763:T:A	rs11888977	T	A	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	163121172	163121173	chr2:163121173:A:C	rs10169365	A	C	C	Hoxd3_MA0912.1	5	1	-	9.132913554568711	9.00411844636314	CTGTTTTAATTACCAA
chr2	163728740	163728741	chr2:163728741:C:T	rs779827880	C	T	C	Hoxd3_MA0912.1	12	1	+	6.85712664314924	5.650374723144376	CTGGCTTCATTGCCCC
chr2	164711459	164711460	chr2:164711460:C:A	chr2:164711460:C:A	C	A	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	164711459	164711460	chr2:164711460:C:T	rs72878807	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	164832238	164832239	chr2:164832239:A:C	rs355812	A	C	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	164972506	164972507	chr2:164972507:T:C	rs10803794	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	165239217	165239218	chr2:165239218:A:G	rs6718960	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	165278521	165278522	chr2:165278522:A:G	rs10166154	A	G	A	Hoxd3_MA0912.1	8	1	+	8.57664511083737	1.6880726512720088	ATGGTTCAATTACCTC
chr2	165575716	165575717	chr2:165575717:A:G	rs10200396	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	165575717	165575718	chr2:165575718:T:C	rs13409101	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	165894276	165894277	chr2:165894277:G:A	rs7425750	G	A	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	166171330	166171331	chr2:166171331:A:G	rs4667881	A	G	A	Hoxd3_MA0912.1	15	1	-	7.905106775897506	7.1274022073094985	GTGGAGCAATTAACTT
chr2	166351775	166351776	chr2:166351776:T:C	rs6746587	T	C	t	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	167137525	167137526	chr2:167137526:T:C	chr2:167137526:T:C	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	167142686	167142687	chr2:167142687:A:C	rs76005464	A	C	A	Hoxd3_MA0912.1	11	1	+	7.757049158389448	1.0124129889771185	CTGAGTTCATGACTCC
chr2	167195278	167195279	chr2:167195279:C:A	rs77816235	C	A	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	167961915	167961916	chr2:167961916:C:T	rs10208532	C	T	C	Hoxd3_MA0912.1	2	1	-	7.540060365243386	6.090225321086347	CTGGGCAAATTAACCC
chr2	168178767	168178768	chr2:168178768:T:C	rs10221810	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	168182468	168182469	chr2:168182469:A:G	rs4667569	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	168253445	168253446	chr2:168253446:A:G	rs13002388	A	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	168298394	168298395	chr2:168298395:G:A	rs55752940	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	168339168	168339169	chr2:168339169:G:A	rs74414868	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	168358766	168358767	chr2:168358767:G:A	rs7562239	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	168686330	168686331	chr2:168686331:G:A	rs115013769	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	168686770	168686771	chr2:168686771:G:T	rs114705252	G	T	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	168693722	168693723	chr2:168693723:G:A	rs62174421	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	168757128	168757129	chr2:168757129:G:A	rs17251700	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	168973817	168973818	chr2:168973818:A:G	rs2287622	A	G	A	Hoxd3_MA0912.1	11	1	+	9.274217647070369	7.488291698889375	CTGGTTTAATGACCAT
chr2	168976241	168976242	chr2:168976242:C:T	rs4148785	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	168976250	168976251	chr2:168976251:G:C	rs4148784	G	C	C	Hoxd3_MA0912.1	5	1	+	9.491750008065278	9.303223674384443	TTGTTGTAATTGCCTT
chr2	169755735	169755736	chr2:169755736:A:G	rs35524975	A	G	A	Hoxd3_MA0912.1	4	1	-	8.302526306249227	7.328685124048519	CTTATCTAATTAGGCT
chr2	170102171	170102172	chr2:170102172:T:G	rs6711417	T	G	T	Hoxd3_MA0912.1	13	1	+	7.473090161753438	6.499248979552728	CAGGCGCAATTACTGT
chr2	170576005	170576006	chr2:170576006:A:T	rs4667646	A	T	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	171210800	171210801	chr2:171210801:T:C	rs13403972	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	171532269	171532270	chr2:171532270:C:T	rs62181673	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	171532293	171532294	chr2:171532294:A:G	rs6734372	A	G	G	Hoxd3_MA0912.1	6	1	-	7.642661775256167	5.856735827075173	GTGTGCTCATTACACT
chr2	171816942	171816943	chr2:171816943:G:A	rs6716901	G	A	g	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	171852704	171852705	chr2:171852705:G:C	rs3770444	G	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	172198387	172198388	chr2:172198388:A:G	rs35482192	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	172198540	172198541	chr2:172198541:G:T	rs6720175	G	T	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	172358469	172358470	chr2:172358470:C:G	rs13012568	C	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	172434267	172434268	chr2:172434268:T:C	rs10184567	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	172448226	172448227	chr2:172448227:C:A	rs12469788	C	A	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	172481176	172481177	chr2:172481177:G:A	rs375254848	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr2	172516355	172516356	chr2:172516356:C:G	rs79346771	C	G	G	Hoxd3_MA0912.1	4	1	-	9.496963535307836	7.918885624594755	TGGAGTTAATTAAAGC
chr2	172516361	172516362	chr2:172516362:T:C	rs111613452	T	C	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	172516366	172516367	chr2:172516367:A:T	rs79594061	A	T	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	172843388	172843389	chr2:172843389:G:A	rs724997	G	A	G	Hoxd3_MA0912.1	4	1	+	9.054054057526352	8.44981732901398	CTTGGATAATTAGTGT
chr2	173161216	173161217	chr2:173161217:G:C	rs112149705	G	C	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	173211032	173211033	chr2:173211033:G:A	rs1866631	G	A	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	173264635	173264636	chr2:173264636:T:G	rs6716769	T	G	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	173573233	173573234	chr2:173573234:C:T	rs12619702	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	173590426	173590427	chr2:173590427:G:A	rs11885934	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	173659191	173659192	chr2:173659192:G:A	rs16861953	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	174039989	174039990	chr2:174039990:A:G	rs13017115	A	G	A	Hoxd3_MA0912.1	8	1	+	8.170398180093315	1.2818257205279533	CTTGGCCAATTAAACC
chr2	174248394	174248395	chr2:174248395:G:T	rs563733753	G	T	G	Hoxd3_MA0912.1	5	1	-	8.895587680563922	8.359550637451436	CTGGGCTCATTGCCCT
chr2	174248401	174248402	chr2:174248402:C:A	rs920912097	C	A	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	174248407	174248408	chr2:174248408:A:C	rs189431406	A	C	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	174331855	174331856	chr2:174331856:A:C	rs76153571	A	C	A	Hoxd3_MA0912.1	13	1	+	8.641323906354792	9.245560634867166	TAGTGCTAATTGCACT
chr2	174345951	174345952	chr2:174345952:C:G	chr2:174345952:C:G	C	G	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	174750303	174750304	chr2:174750304:C:T	rs11904606	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	175234263	175234264	chr2:175234264:G:A	rs60593477	G	A	G	Hoxd3_MA0912.1	3	1	+	7.253641071570447	7.367738822609471	CAGGGGCCATTAAACT
chr2	175442220	175442221	chr2:175442221:C:T	rs117937285	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	175575987	175575988	chr2:175575988:A:C	rs4075842	A	C	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	176111728	176111729	chr2:176111729:G:A	rs818629	G	A	A	Hoxd3_MA0912.1	14	1	-	9.367795651592544	8.803459205460253	CTAATTTAATTAACCA
chr2	176270567	176270568	chr2:176270568:A:G	rs145057245	A	G	A	Hoxd3_MA0912.1	15	1	-	8.189866371028154	7.412161802440146	CTGTCTTCATTACTGT
chr2	176961142	176961143	chr2:176961143:T:A	rs78744523	T	A	T	Hoxd3_MA0912.1	0	1	+	10.324679086002066	9.60824495406333	TTGCAGTAATTAATGT
chr2	177118644	177118645	chr2:177118645:T:A	rs7583348	T	A	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	177910660	177910661	chr2:177910661:T:C	rs11883602	T	C	T	Hoxd3_MA0912.1	15	1	+	10.070100062301512	9.292395493713503	ATTGGCTAATTAATCT
chr2	178414235	178414236	chr2:178414236:C:G	rs536253262	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	178431938	178431939	chr2:178431939:T:C	rs3997877	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	178531626	178531627	chr2:178531627:G:A	rs3829748	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	178532038	178532039	chr2:178532039:C:T	rs68080670	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	178532054	178532055	chr2:178532055:C:G	rs55866005	C	G	C	Hoxd3_MA0912.1	0	1	+	7.761394703311537	5.777018273428427	CTGGCCTCATTAACTC
chr2	178740977	178740978	chr2:178740978:A:G	rs2742357	A	G	A	Hoxd3_MA0912.1	10	1	-	8.735960933240797	1.9562776906103698	CTGCTTTAATTACAGA
chr2	179443922	179443923	chr2:179443923:G:C	rs72964269	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	179444429	179444430	chr2:179444430:G:C	rs67886810	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	179580290	179580291	chr2:179580291:G:T	rs80300097	G	T	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	179823932	179823933	chr2:179823933:C:T	rs113373167	C	T	C	Hoxd3_MA0912.1	6	1	+	7.5319678519356446	9.317893800116638	CTTGAGCAATTACAGG
chr2	180046690	180046691	chr2:180046691:T:A	rs6708640	T	A	.	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	180144147	180144148	chr2:180144148:A:T	rs11884036	A	T	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	180657253	180657254	chr2:180657254:A:C	rs17364694	A	C	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	181152029	181152030	chr2:181152030:A:G	rs13033467	A	G	A	Hoxd3_MA0912.1	13	1	-	9.063137419752053	9.667374148264427	CTGACTTAATTAATGA
chr2	181280664	181280665	chr2:181280665:C:T	rs78111114	C	T	C	Hoxd3_MA0912.1	14	1	-	8.843379783306077	7.899414453541944	TCTGATTAATTACCGT
chr2	181280681	181280682	chr2:181280682:A:G	rs62180208	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	181370212	181370213	chr2:181370213:T:A	rs17198696	T	A	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	181370258	181370259	chr2:181370259:G:T	rs17198703	G	T	g	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	181426905	181426906	chr2:181426906:G:C	rs143947584	G	C	G	Hoxd3_MA0912.1	14	1	+	9.163236956974384	9.339652322258832	ATGTGGCAATTACAGT
chr2	181516322	181516323	chr2:181516323:A:G	rs1375491	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	182088182	182088183	chr2:182088183:A:C	rs1196149	A	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	182203244	182203245	chr2:182203245:A:G	rs4666819	A	G	A	Hoxd3_MA0912.1	1	1	-	7.970417280845165	5.886356793309034	CTGAGTTCATGACATT
chr2	182243295	182243296	chr2:182243296:T:C	rs2568672	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	182243311	182243312	chr2:182243312:A:T	rs2568673	A	T	A	Hoxd3_MA0912.1	3	1	-	8.307627928312652	8.871964374444943	CTCTCATAATTAACCT
chr2	182261298	182261299	chr2:182261299:C:T	rs6759303	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	182521605	182521606	chr2:182521606:C:T	rs67361657	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	182833363	182833364	chr2:182833364:A:G	rs4666865	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	182852825	182852826	chr2:182852826:G:A	rs143081423	G	A	g	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	182981650	182981651	chr2:182981651:G:A	rs58515193	G	A	G	Hoxd3_MA0912.1	12	1	-	8.287797158741029	7.081045238736165	GTGCTGTAATTACAGT
chr2	183464043	183464044	chr2:183464044:T:G	rs7590335	T	G	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	183488170	183488171	chr2:183488171:C:T	rs7423581	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	184012002	184012003	chr2:184012003:C:T	rs72891531	C	T	C	Hoxd3_MA0912.1	12	1	+	8.738895884646825	7.532143964641961	TTTAAGTAATTGCCTT
chr2	184564680	184564681	chr2:184564681:A:G	rs141615859	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	184804399	184804400	chr2:184804400:T:C	rs6751335	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	185734916	185734917	chr2:185734917:C:T	rs13027342	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	185857944	185857945	chr2:185857945:T:A	rs149052186	T	A	T	Hoxd3_MA0912.1	3	1	-	9.857722288320204	9.293385842187913	TTGATGTAATTACTAG
chr2	186591393	186591394	chr2:186591394:A:G	rs3768777	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	186692551	186692552	chr2:186692552:G:C	rs11684626	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	186692566	186692567	chr2:186692567:C:T	rs3886170	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	186827577	186827578	chr2:186827578:T:C	rs12616053	T	C	T	Hoxd3_MA0912.1	9	1	+	9.897622570700287	3.0090501111349237	TTGTGGTAATTACTAG
chr2	187327584	187327585	chr2:187327585:T:A	rs7567485	T	A	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	187371551	187371552	chr2:187371552:G:A	rs72902452	G	A	G	Hoxd3_MA0912.1	0	1	-	9.213269425113472	9.265774922491403	CTCTACTAATTACTCT
chr2	188046920	188046921	chr2:188046921:C:T	rs13030244	C	T	C	Hoxd3_MA0912.1	12	1	+	9.314449397045298	8.107697477040432	ATGGATTAATTGCACT
chr2	188326716	188326717	chr2:188326717:C:T	rs545387311	C	T	C	Hoxd3_MA0912.1	1	1	+	7.9527049392475675	10.036765426783697	TCGTGTTAATGACCTT
chr2	188495191	188495192	chr2:188495192:C:T	rs1009782878	C	T	C	Hoxd3_MA0912.1	6	1	+	8.31750518603152	10.103431134212514	TTTGGTCAATTAATGG
chr2	188786501	188786502	chr2:188786502:G:T	rs2176502	G	T	G	Hoxd3_MA0912.1	0	1	-	8.354277801660915	7.690349167100112	CATGTGTAATTAACTC
chr2	189047644	189047645	chr2:189047645:T:G	rs57547130	T	G	T	Hoxd3_MA0912.1	0	1	-	10.131558054187286	10.795486688748092	ATGATGTAATTAAAGC
chr2	189296056	189296057	chr2:189296057:A:T	rs72912280	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	189487825	189487826	chr2:189487826:G:T	rs12622720	G	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	189487841	189487842	chr2:189487842:C:T	rs12693540	C	T	T	Hoxd3_MA0912.1	2	1	-	8.39531653734819	6.945481493191149	ATGAGATAATTGCCTG
chr2	190181242	190181243	chr2:190181243:G:T	rs6720084	G	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	190181246	190181247	chr2:190181247:T:C	rs75672169	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	190654133	190654134	chr2:190654134:G:C	rs1860849	G	C	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	191310595	191310596	chr2:191310596:T:C	rs4853584	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	191555320	191555321	chr2:191555321:G:C	rs6708462	G	C	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr2	191646058	191646059	chr2:191646059:A:C	rs12616858	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	191854287	191854288	chr2:191854288:C:T	rs7605613	C	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr2	192196862	192196863	chr2:192196863:A:G	rs539415072	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	192708513	192708514	chr2:192708514:T:C	rs111879657	T	C	T	Hoxd3_MA0912.1	15	1	+	8.849334534192705	8.071629965604696	TTGAAGCAATTATCTT
chr2	193378048	193378049	chr2:193378049:G:A	rs2357640	G	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	193782676	193782677	chr2:193782677:G:C	rs12053391	G	C	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	195312752	195312753	chr2:195312753:C:T	rs12617577	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	195843114	195843115	chr2:195843115:T:C	rs7599605	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	196162652	196162653	chr2:196162653:T:C	rs6752418	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	196377372	196377373	chr2:196377373:C:T	rs61644428	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	197075889	197075890	chr2:197075890:A:C	rs137930548	A	C	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	198075811	198075812	chr2:198075812:A:T	rs140383330	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	198251554	198251555	chr2:198251555:A:G	rs16829036	A	G	A	Hoxd3_MA0912.1	13	1	-	9.815564538820112	10.419801267332486	CTGAGGTCATTAATTT
chr2	198316177	198316178	chr2:198316178:T:G	rs62279272	T	G	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	198717854	198717855	chr2:198717855:G:A	rs4675232	G	A	-	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	198763050	198763051	chr2:198763051:G:A	rs10189746	G	A	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	199916103	199916104	chr2:199916104:G:A	rs7573018	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	200279068	200279069	chr2:200279069:C:T	rs62179500	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	200330103	200330104	chr2:200330104:C:G	rs3892099	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	200716034	200716035	chr2:200716035:T:C	chr2:200716035:T:C	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr2	200763590	200763591	chr2:200763591:T:C	rs11888596	T	C	C	Hoxd3_MA0912.1	7	1	-	8.608302703133937	1.8286194605035093	CTGTGCCAATTATTCT
chr2	200763608	200763609	chr2:200763609:G:A	rs541802665	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	200867584	200867585	chr2:200867585:A:C	rs1030172167	A	C	A	Hoxd3_MA0912.1	4	1	-	11.27056717261624	11.874803901128614	CTGGTCTAATTAATGT
chr2	201179955	201179956	chr2:201179956:G:A	rs561702268	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr2	201179992	201179993	chr2:201179993:G:A	rs11900753	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	201709155	201709156	chr2:201709156:C:G	rs72613731	C	G	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	201769324	201769325	chr2:201769325:A:G	rs7569542	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	201769334	201769335	chr2:201769335:A:T	rs150213250	A	T	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr2	202051674	202051675	chr2:202051675:T:G	rs12470375	T	G	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr2	202109923	202109924	chr2:202109924:G:T	rs111987869	G	T	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	202237483	202237484	chr2:202237484:T:C	rs150045648	T	C	T	Hoxd3_MA0912.1	12	1	-	9.33173607921851	8.36421384827948	CTGTTCTAATTAAACA
chr2	202721631	202721632	chr2:202721632:G:T	rs772675255	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr2	202965911	202965912	chr2:202965912:G:C	chr2:202965912:G:C	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr2	203127212	203127213	chr2:203127213:T:G	rs11689534	T	G	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	203412884	203412885	chr2:203412885:G:C	rs1470789	G	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr2	203908629	203908630	chr2:203908630:A:G	rs2217202	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	203931370	203931371	chr2:203931371:G:A	rs12464033	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	204276081	204276082	chr2:204276082:G:A	rs723021	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	204880833	204880834	chr2:204880834:G:A	rs7586528	G	A	g	Hoxd3_MA0912.1	12	1	-	7.998472360173591	6.791720440168728	CCTAGGTAATTACTGC
chr2	204915774	204915775	chr2:204915775:T:C	rs11884561	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	204915808	204915809	chr2:204915809:T:C	rs12991340	T	C	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	205679617	205679618	chr2:205679618:T:C	rs73983211	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	205769863	205769864	chr2:205769864:G:T	rs111449422	G	T	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	206530464	206530465	chr2:206530465:G:C	rs74412636	G	C	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	207038123	207038124	chr2:207038124:C:T	rs1990809	C	T	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	207112805	207112806	chr2:207112806:T:C	rs13015463	T	C	T	Hoxd3_MA0912.1	14	1	+	9.675743226282787	10.240079672415078	ATAAAGTAATTACCTT
chr2	207363631	207363632	chr2:207363632:C:A	rs72951688	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	207472142	207472143	chr2:207472143:T:C	rs6752276	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr2	207473180	207473181	chr2:207473181:T:A	chr2:207473181:T:A	T	A	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	207667283	207667284	chr2:207667284:C:T	rs13417554	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	207969752	207969753	chr2:207969753:C:T	rs11679492	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	207969766	207969767	chr2:207969767:C:T	rs78972205	C	T	C	Hoxd3_MA0912.1	2	1	+	10.45627118239995	10.922555030543155	CTCGGGTAATTAATCT
chr2	208026936	208026937	chr2:208026937:C:T	rs1466186	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr2	208046183	208046184	chr2:208046184:T:C	rs10193505	T	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	208064571	208064572	chr2:208064572:C:G	rs116340569	C	G	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	208064587	208064588	chr2:208064588:G:C	rs10932231	G	C	G	Hoxd3_MA0912.1	15	1	+	8.435001237592816	8.481305805634502	CTGAACTAATTGACAG
chr2	208100234	208100235	chr2:208100235:G:A	rs10178641	G	A	a	Hoxd3_MA0912.1	30	0	+	0	0	.
chr2	208607825	208607826	chr2:208607826:G:A	rs13018313	G	A	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	208698776	208698777	chr2:208698777:T:G	rs79394453	T	G	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	208856568	208856569	chr2:208856569:A:G	rs6732564	A	G	A	Hoxd3_MA0912.1	8	1	+	7.454742430815676	0.566169971250313	TGGGTGCAATTAGCCT
chr2	209556447	209556448	chr2:209556448:G:A	rs75378862	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	209585911	209585912	chr2:209585912:T:A	rs13432941	T	A	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	211182394	211182395	chr2:211182395:C:A	rs16845473	C	A	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	211329496	211329497	chr2:211329497:T:C	rs12694232	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	211435329	211435330	chr2:211435330:T:C	rs6742399	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	211509722	211509723	chr2:211509723:A:G	rs1851187	A	G	A	Hoxd3_MA0912.1	12	1	-	9.178034305246593	10.384786225251457	TTGAGTTCATTATAGT
chr2	211824224	211824225	chr2:211824225:C:G	rs75734424	C	G	C	Hoxd3_MA0912.1	2	1	+	8.031580205444854	9.815054623138801	CTCAGCTAATTGCTTT
chr2	211824238	211824239	chr2:211824239:C:A	rs12475812	C	A	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr2	212136121	212136122	chr2:212136122:C:T	rs113499172	C	T	c	Hoxd3_MA0912.1	2	1	-	8.316908209293578	6.867073165136539	CCGCTTTAATTACAGT
chr2	212145489	212145490	chr2:212145490:G:A	rs7559605	G	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	212300066	212300067	chr2:212300067:C:A	rs17418814	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	212537451	212537452	chr2:212537452:C:A	rs115734790	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	212537476	212537477	chr2:212537477:G:A	rs542671073	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr2	212537481	212537482	chr2:212537482:G:C	rs114257763	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	213235085	213235086	chr2:213235086:G:T	rs1372140	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr2	213235093	213235094	chr2:213235094:G:C	rs62186592	G	C	G	Hoxd3_MA0912.1	14	1	-	8.429973855858002	8.253558490573553	CTGCATTCATTACCCC
chr2	213293073	213293074	chr2:213293074:G:T	rs1488984	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	213861888	213861889	chr2:213861889:G:A	rs10170343	G	A	G	Hoxd3_MA0912.1	14	1	+	9.780549496739082	8.83658416697495	TTGAATTCATTACTGT
chr2	213911515	213911516	chr2:213911516:A:G	rs16851079	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	214537065	214537066	chr2:214537066:A:C	rs78121988	A	C	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	215121705	215121706	chr2:215121706:A:G	rs59145105	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	215395833	215395834	chr2:215395834:G:A	rs2692227	G	A	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	215521455	215521456	chr2:215521456:T:C	rs10208162	T	C	T	Hoxd3_MA0912.1	9	1	+	9.613946248322128	2.7253737887567664	CTGGATTAATGAATGT
chr2	215521470	215521471	chr2:215521471:T:A	rs2372566	T	A	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	215521471	215521472	chr2:215521472:A:C	rs2372567	A	C	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	215528918	215528919	chr2:215528919:T:C	rs16854240	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	215573690	215573691	chr2:215573691:A:C	rs6710204	A	C	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	215968293	215968294	chr2:215968294:C:A	rs12694381	C	A	A	Hoxd3_MA0912.1	15	1	-	7.847617805966941	8.671626942596635	CTGTGGTAATGAGTGG
chr2	216209930	216209931	chr2:216209931:T:C	chr2:216209931:T:C	T	C	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	216223627	216223628	chr2:216223628:C:G	rs207902	C	G	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	216285790	216285791	chr2:216285791:G:A	rs83611	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	216285799	216285800	chr2:216285800:T:A	rs83612	T	A	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	216308740	216308741	chr2:216308741:C:G	rs184734976	C	G	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	216773797	216773798	chr2:216773798:T:C	rs4674113	T	C	T	Hoxd3_MA0912.1	1	1	+	8.43225702865351	6.34819654111738	CTGGGTTCATTGAAGT
chr2	216849549	216849550	chr2:216849550:T:G	rs56142049	T	G	t	Hoxd3_MA0912.1	21	0	-	0	0	.
chr2	216872219	216872220	chr2:216872220:C:T	rs6745015	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	217064296	217064297	chr2:217064297:A:G	rs62176284	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	217078065	217078066	chr2:217078066:G:A	rs181677806	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	217219088	217219089	chr2:217219089:T:A	rs3796023	T	A	A	Hoxd3_MA0912.1	6	1	+	8.534113890869671	4.19642282977563	CTTGGGTAATTGTCCT
chr2	217278337	217278338	chr2:217278338:A:G	rs4674140	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	217324501	217324502	chr2:217324502:C:G	rs12470351	C	G	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr2	217617263	217617264	chr2:217617264:A:G	rs2568189	A	G	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	217766817	217766818	chr2:217766818:C:T	rs62183687	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	217839514	217839515	chr2:217839515:A:G	rs1008835	A	G	a	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	217839515	217839516	chr2:217839516:T:C	rs72947948	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	217963311	217963312	chr2:217963312:G:T	rs16858515	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr2	218261464	218261465	chr2:218261465:G:T	rs78291641	G	T	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	219357064	219357065	chr2:219357065:A:C	rs73081192	A	C	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	219566085	219566086	chr2:219566086:C:T	rs6706418	C	T	C	Hoxd3_MA0912.1	7	1	+	7.92171168799232	3.1159708115424114	CTGTGCTCATTAGCTC
chr2	219688571	219688572	chr2:219688572:A:G	rs970251357	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	219688593	219688594	chr2:219688594:A:G	rs79151799	A	G	A	Hoxd3_MA0912.1	12	1	+	7.934631512686383	6.967109281747352	GTGAGTCAATTAAACC
chr2	220096624	220096625	chr2:220096625:C:T	rs4674498	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	220118670	220118671	chr2:220118671:A:G	rs56252963	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	220222104	220222105	chr2:220222105:C:T	rs3894204	C	T	C	Hoxd3_MA0912.1	14	1	-	9.062701932361783	8.11873660259765	CTGAAACAATTACTGT
chr2	220857810	220857811	chr2:220857811:C:T	rs631486	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr2	221166499	221166500	chr2:221166500:A:G	rs138770034	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	221200455	221200456	chr2:221200456:A:T	rs16862240	A	T	A	Hoxd3_MA0912.1	5	1	+	7.699816728246697	8.553175213245591	CTGGGATCATTACAGA
chr2	221474113	221474114	chr2:221474114:C:T	rs1430211	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr2	221474114	221474115	chr2:221474115:G:A	rs1025373	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	221675388	221675389	chr2:221675389:G:A	rs139479055	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr2	221675402	221675403	chr2:221675403:A:G	chr2:221675403:A:G	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr2	221833933	221833934	chr2:221833934:A:T	rs116348498	A	T	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	222398797	222398798	chr2:222398798:T:G	rs12621612	T	G	T	Hoxd3_MA0912.1	6	1	+	7.868719448795091	1.1240832793827618	CTGGATTCATTAGAGC
chr2	222753662	222753663	chr2:222753663:A:T	rs2166650	A	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	223465766	223465767	chr2:223465767:T:C	rs12694613	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	223856774	223856775	chr2:223856775:G:A	rs113337716	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	223956498	223956499	chr2:223956499:C:T	rs79305596	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	224063126	224063127	chr2:224063127:A:G	rs282275	A	G	g	Hoxd3_MA0912.1	5	1	-	10.908893547274936	10.59157210538853	TTAAGTTAATTAATGT
chr2	224084512	224084513	chr2:224084513:A:G	rs73992381	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr2	224157620	224157621	chr2:224157621:G:C	rs192681986	G	C	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	224350968	224350969	chr2:224350969:A:G	rs12612283	A	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr2	224403748	224403749	chr2:224403749:G:A	rs13402429	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	224403754	224403755	chr2:224403755:G:A	rs6734850	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	224422082	224422083	chr2:224422083:C:T	rs4674896	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	224829864	224829865	chr2:224829865:C:G	rs6713274	C	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr2	224838107	224838108	chr2:224838108:A:C	rs16866215	A	C	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	224870296	224870297	chr2:224870297:C:A	rs116691373	C	A	C	Hoxd3_MA0912.1	15	1	+	7.934631512686383	7.04732831768548	GTGAGTCAATTAAACC
chr2	225532311	225532312	chr2:225532312:T:C	rs7606323	T	C	C	Hoxd3_MA0912.1	14	1	+	8.883863893691174	9.448200339823465	TTGCTTTAATTGACTT
chr2	225616020	225616021	chr2:225616021:C:G	rs2396247	C	G	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr2	226117491	226117492	chr2:226117492:A:G	rs1522805	A	G	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	226118679	226118680	chr2:226118680:G:A	rs116497421	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	226123545	226123546	chr2:226123546:A:T	rs2140239	A	T	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	226367467	226367468	chr2:226367468:G:A	rs12471184	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr2	226367475	226367476	chr2:226367476:T:C	rs4458207	T	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	226779802	226779803	chr2:226779803:C:A	rs73992213	C	A	C	Hoxd3_MA0912.1	7	1	+	7.720669400681359	9.694611766861879	CTTTGGTCATTACACC
chr2	226779805	226779806	chr2:226779806:T:C	rs73083636	T	C	C	Hoxd3_MA0912.1	10	1	+	7.720669400681359	0.9409861580509322	CTTTGGTCATTACACC
chr2	226801940	226801941	chr2:226801941:A:C	rs62190995	A	C	C	Hoxd3_MA0912.1	8	1	+	9.134988475162208	4.644311288395215	GTGGAGTAATTAACAT
chr2	227159628	227159629	chr2:227159629:C:T	rs146045157	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr2	227207510	227207511	chr2:227207511:A:G	rs79483618	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	227458050	227458051	chr2:227458051:T:C	rs10198051	T	C	T	Hoxd3_MA0912.1	15	1	+	8.481493904303994	7.703789335715986	ATGGTGTAATGAACAT
chr2	227758506	227758507	chr2:227758507:T:G	rs6436737	T	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	227835264	227835265	chr2:227835265:A:T	rs7600553	A	T	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	227862891	227862892	chr2:227862892:C:G	rs931764443	C	G	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr2	227872096	227872097	chr2:227872097:G:C	rs113102184	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	227872109	227872110	chr2:227872110:T:C	rs56359270	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	228141361	228141362	chr2:228141362:C:T	rs4246656	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	228380233	228380234	chr2:228380234:C:T	rs1234192	C	T	C	Hoxd3_MA0912.1	2	1	-	8.373421419989986	6.923586375832948	ATGATCCAATTACCTC
chr2	228645771	228645772	chr2:228645772:A:C	rs3943747	A	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr2	228768367	228768368	chr2:228768368:G:A	rs1852573	G	A	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr2	228768417	228768418	chr2:228768418:C:T	rs1358370	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	228917090	228917091	chr2:228917091:G:C	rs62193778	G	C	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	228919940	228919941	chr2:228919941:G:A	rs573847764	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	229090294	229090295	chr2:229090295:A:G	rs1359633	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr2	229236787	229236788	chr2:229236788:A:G	rs1226991	A	G	A	Hoxd3_MA0912.1	13	1	-	10.88852816292286	11.492764891435234	CTGTGATAATTACTGT
chr2	229236795	229236796	chr2:229236796:T:C	rs4973180	T	C	T	Hoxd3_MA0912.1	5	1	-	10.88852816292286	11.613091539716184	CTGTGATAATTACTGT
chr2	229350785	229350786	chr2:229350786:C:T	rs9784110	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	229422240	229422241	chr2:229422241:C:G	rs551678194	C	G	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr2	229591925	229591926	chr2:229591926:T:C	rs77821734	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	229611145	229611146	chr2:229611146:T:C	rs116156039	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	229696485	229696486	chr2:229696486:T:C	rs208782	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr2	229750158	229750159	chr2:229750159:G:T	rs57373689	G	T	G	Hoxd3_MA0912.1	2	1	+	9.111225706197912	7.794035136647167	ATGAACCAATTAAACT
chr2	230216668	230216669	chr2:230216669:T:C	rs7580900	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr2	230327877	230327878	chr2:230327878:T:C	rs16827131	T	C	t	Hoxd3_MA0912.1	9	1	+	8.057428077977612	1.1688556184122492	CTGATACAATTGACCT
chr2	230616482	230616483	chr2:230616483:A:G	rs4343455	A	G	A	Hoxd3_MA0912.1	8	1	+	7.2320226059789805	0.34345014641361676	CAGAGGTCATTAGAGC
chr2	230678460	230678461	chr2:230678461:T:C	rs138326240	T	C	t	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	230678462	230678463	chr2:230678463:G:A	rs114917080	G	A	g	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	230860692	230860693	chr2:230860693:A:C	rs2438304	A	C	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr2	230936346	230936347	chr2:230936347:T:C	rs57679756	T	C	T	Hoxd3_MA0912.1	0	1	-	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr2	230955007	230955008	chr2:230955008:A:G	rs13390316	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	230955023	230955024	chr2:230955024:C:A	rs13415867	C	A	C	Hoxd3_MA0912.1	6	1	+	9.839770806533037	7.288005693619992	TTGATGCAATTACAGT
chr2	231222671	231222672	chr2:231222672:A:G	rs114992710	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr2	231341031	231341032	chr2:231341032:G:A	rs73096190	G	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	231453523	231453524	chr2:231453524:C:T	rs73100180	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	231488871	231488872	chr2:231488872:A:G	rs35472782	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr2	231513519	231513520	chr2:231513520:T:C	rs6750795	T	C	T	Hoxd3_MA0912.1	11	1	-	9.094817213805268	7.308891265624274	ATGAGGTAATTATATG
chr2	231977535	231977536	chr2:231977536:G:A	rs113457714	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr2	232364468	232364469	chr2:232364469:G:A	rs1518269	G	A	G	Hoxd3_MA0912.1	15	1	-	7.560097673420777	8.337802242008785	CTTGGTCAATTAGCTC
chr2	232467684	232467685	chr2:232467685:T:G	rs11677842	T	G	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	232854166	232854167	chr2:232854167:T:C	rs2044450	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr2	232854193	232854194	chr2:232854194:A:G	chr2:232854194:A:G	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	232915475	232915476	chr2:232915476:C:T	rs778362	C	T	c	Hoxd3_MA0912.1	0	1	+	8.40201603084459	8.454521528222521	CTGGATTCATTACATG
chr2	233050815	233050816	chr2:233050816:A:C	rs35487055	A	C	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr2	233050824	233050825	chr2:233050825:C:T	rs9917354	C	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	233387574	233387575	chr2:233387575:C:T	rs72980318	C	T	C	Hoxd3_MA0912.1	14	1	-	8.102922412910868	7.158957083146736	TTGGCTCAATTAAAGC
chr2	233387590	233387591	chr2:233387591:A:G	rs73115377	A	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr2	233415545	233415546	chr2:233415546:G:C	rs838735	G	C	G	Hoxd3_MA0912.1	14	1	-	9.625339191589651	9.448923826305203	CAGAGATAATTACTCC
chr2	233702447	233702448	chr2:233702448:T:G	rs17863787	T	G	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	233803030	233803031	chr2:233803031:G:C	rs730673	G	C	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	233818319	233818320	chr2:233818320:G:C	rs13425899	G	C	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr2	233858094	233858095	chr2:233858095:G:A	rs10929312	G	A	g	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr2	233858097	233858098	chr2:233858098:T:A	rs502321	T	A	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr2	234204695	234204696	chr2:234204696:C:G	rs78254149	C	G	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	234204697	234204698	chr2:234204698:A:C	rs60905338	A	C	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr2	234339847	234339848	chr2:234339848:T:C	rs1533619	T	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr2	234413124	234413125	chr2:234413125:A:G	rs7424598	A	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	234413131	234413132	chr2:234413132:A:G	rs10165529	A	G	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr2	234465639	234465640	chr2:234465640:C:G	chr2:234465640:C:G	C	G	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	234515807	234515808	chr2:234515808:C:A	rs114983468	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	234564774	234564775	chr2:234564775:T:C	rs62186688	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr2	234604556	234604557	chr2:234604557:A:G	rs76346222	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	234604573	234604574	chr2:234604574:A:C	rs6730346	A	C	C	Hoxd3_MA0912.1	3	1	+	10.440922079467134	9.13990441075517	TTGACTTAATTAACAT
chr2	234604598	234604599	chr2:234604599:A:G	rs72981687	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr2	234624011	234624012	chr2:234624012:G:A	rs4459785	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr2	234680352	234680353	chr2:234680353:A:C	rs4392320	A	C	C	Hoxd3_MA0912.1	12	1	+	8.633875319151493	8.633875319151493	CTGTGGTCATTGACCT
chr2	234696561	234696562	chr2:234696562:G:A	rs7580933	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr2	234798203	234798204	chr2:234798204:A:C	rs113223534	A	C	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	235014181	235014182	chr2:235014182:C:T	rs115148720	C	T	C	Hoxd3_MA0912.1	14	1	+	8.205123819419157	7.640787373286866	GAGGTGTAATTACCCG
chr2	235305362	235305363	chr2:235305363:G:A	rs13020554	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	235420035	235420036	chr2:235420036:G:A	rs12986427	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr2	235768992	235768993	chr2:235768993:A:G	rs72975300	A	G	A	Hoxd3_MA0912.1	12	1	-	8.756274570247125	9.96302649025199	TTGGTATAATTATTGG
chr2	235929257	235929258	chr2:235929258:T:C	rs7593724	T	C	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	236050246	236050247	chr2:236050247:G:A	rs73125522	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr2	236237257	236237258	chr2:236237258:T:C	rs73999263	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr2	236237346	236237347	chr2:236237347:G:C	rs182482787	G	C	-	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	236255107	236255108	chr2:236255108:C:G	rs72976652	C	G	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr2	236370048	236370049	chr2:236370049:C:T	rs62192395	C	T	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr2	236752138	236752139	chr2:236752139:A:G	rs13419340	A	G	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr2	236846043	236846044	chr2:236846044:C:G	rs76540753	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr2	237062785	237062786	chr2:237062786:A:G	rs73083520	A	G	G	Hoxd3_MA0912.1	13	1	+	7.6936197725478355	6.7197785903471265	CTGGTGTCATTAGAGG
chr2	237316665	237316666	chr2:237316666:T:C	rs10168891	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr2	237316687	237316688	chr2:237316688:A:T	rs10166408	A	T	T	Hoxd3_MA0912.1	8	1	+	9.363144535940561	4.872467349173569	TGGGCTTAATTAACCT
chr2	237321766	237321767	chr2:237321767:A:G	rs77117740	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	237391214	237391215	chr2:237391215:C:T	rs73093784	C	T	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	237393818	237393819	chr2:237393819:G:A	rs75829173	G	A	G	Hoxd3_MA0912.1	14	1	-	7.965860216052803	7.401523769920512	CAGAGCTAATTGGCCG
chr2	237496716	237496717	chr2:237496717:G:A	rs13410662	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr2	237612657	237612658	chr2:237612658:C:T	rs55705558	C	T	C	Hoxd3_MA0912.1	2	1	-	7.276718379714955	5.826883335557916	CTGGTTTCATGAGCGT
chr2	237612678	237612679	chr2:237612679:T:C	rs10199579	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr2	237652907	237652908	chr2:237652908:G:T	rs4663775	G	T	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr2	237743999	237744000	chr2:237744000:A:G	rs75899564	A	G	A	Hoxd3_MA0912.1	9	1	-	7.945065576388973	1.0564931168236105	CTGAGTTCATTGCTCC
chr2	237752847	237752848	chr2:237752848:C:T	rs892564	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr2	237968766	237968767	chr2:237968767:A:C	rs62194508	A	C	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr2	238096372	238096373	chr2:238096373:C:G	rs7591078	C	G	C	Hoxd3_MA0912.1	2	1	-	12.353843351132923	10.570368933438974	CTGATGTAATTAACCT
chr2	238202916	238202917	chr2:238202917:T:C	rs192211535	T	C	T	Hoxd3_MA0912.1	5	1	-	9.777295922419336	10.501859299212661	TTGTGATAATTAACAG
chr2	238217064	238217065	chr2:238217065:T:C	rs550057675	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	238338005	238338006	chr2:238338006:G:A	rs13398327	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	238643429	238643430	chr2:238643430:A:G	rs12987518	A	G	A	Hoxd3_MA0912.1	9	1	-	9.25395487969007	2.365382420124707	CTGTTATAATTATTCT
chr2	238702863	238702864	chr2:238702864:C:G	rs13020042	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr2	238702891	238702892	chr2:238702892:C:T	rs114661697	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr2	238966317	238966318	chr2:238966318:A:G	rs7585332	A	G	A	Hoxd3_MA0912.1	10	1	-	9.32186385906058	2.5421806164301533	TGGAGGTAATTAATGG
chr2	239206329	239206330	chr2:239206330:A:T	rs3828227	A	T	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr2	239428762	239428763	chr2:239428763:G:A	rs7582778	G	A	G	Hoxd3_MA0912.1	3	1	-	8.018112281163903	8.754793503743576	CTGCGGTAATGACCCA
chr2	239539115	239539116	chr2:239539116:G:A	rs4852090	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr2	239623299	239623300	chr2:239623300:G:A	rs79025557	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr2	239623302	239623303	chr2:239623303:C:T	rs72996491	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr2	239778727	239778728	chr2:239778728:G:A	rs187257469	G	A	G	Hoxd3_MA0912.1	14	1	-	8.705516162151817	8.141179716019526	TGGAACTAATTACTCG
chr2	239810105	239810106	chr2:239810106:T:G	rs7584414	T	G	T	Hoxd3_MA0912.1	2	1	+	8.962940330725162	10.280130900275907	CTTGGCTAATTATTTT
chr2	239912519	239912520	chr2:239912520:G:A	rs13012110	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr2	239912549	239912550	chr2:239912550:C:T	rs28437500	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr2	239912565	239912566	chr2:239912566:T:C	rs28533088	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr2	240127133	240127134	chr2:240127134:G:A	rs35819442	G	A	A	Hoxd3_MA0912.1	2	1	+	8.890788309509157	7.440953265352118	TAGTAATAATTAACGG
chr2	240127157	240127158	chr2:240127158:G:C	rs35905059	G	C	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr2	240558258	240558259	chr2:240558259:C:T	rs1057165445	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr2	240634841	240634842	chr2:240634842:T:G	rs2975793	T	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr2	240928955	240928956	chr2:240928956:G:A	rs74000142	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr2	241142806	241142807	chr2:241142807:C:A	rs2074834	C	A	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr2	241142846	241142847	chr2:241142847:T:C	rs6709462	T	C	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr2	241317396	241317397	chr2:241317397:G:C	rs12233133	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr2	241363395	241363396	chr2:241363396:A:G	rs3771550	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr20	145571	145572	chr20:145572:T:C	rs77783981	T	C	.	Hoxd3_MA0912.1	24	0	+	0	0	.
chr20	145582	145583	chr20:145583:A:G	rs74717966	A	G	.	Hoxd3_MA0912.1	35	0	+	0	0	.
chr20	400796	400797	chr20:400797:T:C	rs6084330	T	C	T	Hoxd3_MA0912.1	6	1	+	10.228427329885987	8.442501381704993	TAGTGTTAATTACCAT
chr20	461893	461894	chr20:461894:C:G	rs542082285	C	G	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	582388	582389	chr20:582389:A:G	rs1973591	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr20	938187	938188	chr20:938188:C:A	rs561548	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr20	949015	949016	chr20:949016:G:A	rs485610	G	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr20	967748	967749	chr20:967749:C:T	rs369154936	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	1213057	1213058	chr20:1213058:G:A	rs148406705	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr20	1213061	1213062	chr20:1213062:G:A	rs118080645	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr20	1213072	1213073	chr20:1213073:A:G	chr20:1213073:A:G	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	1375616	1375617	chr20:1375617:G:C	rs6074549	G	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr20	1400121	1400122	chr20:1400122:C:T	rs77271204	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr20	1466047	1466048	chr20:1466048:A:G	rs116832887	A	G	G	Hoxd3_MA0912.1	1	1	-	8.287597624059797	6.203537136523668	ATTCGGTAATTAACTG
chr20	1669165	1669166	chr20:1669166:G:A	rs149236468	G	A	-	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	1672402	1672403	chr20:1672403:C:T	rs72484089	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr20	1758049	1758050	chr20:1758050:T:A	rs73582719	T	A	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	1758067	1758068	chr20:1758068:C:T	rs57207776	C	T	C	Hoxd3_MA0912.1	14	1	+	8.970048390068555	8.405711943936264	CTTTAATAATTAACCC
chr20	1926443	1926444	chr20:1926444:T:C	rs35383893	T	C	T	Hoxd3_MA0912.1	9	1	+	8.030582856104012	1.1420103965386474	GTGAGCTCATTACTGT
chr20	2009012	2009013	chr20:2009013:G:A	rs1418043	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	2010830	2010831	chr20:2010831:C:T	rs2050213	C	T	C	Hoxd3_MA0912.1	0	1	+	8.050767107976124	8.103272605354055	CGCTGTTAATTACTCT
chr20	2319370	2319371	chr20:2319371:G:A	rs214818	G	A	a	Hoxd3_MA0912.1	27	0	-	0	0	.
chr20	2349716	2349717	chr20:2349717:G:C	rs2422695	G	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr20	2386941	2386942	chr20:2386942:C:A	rs73071366	C	A	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	2386945	2386946	chr20:2386946:G:A	rs6048563	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr20	2539460	2539461	chr20:2539461:A:G	rs4815298	A	G	A	Hoxd3_MA0912.1	0	1	-	9.083961181948432	9.031455684570501	TTGTGGTAATGAACTG
chr20	2993388	2993389	chr20:2993389:T:C	rs1178037	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr20	3395971	3395972	chr20:3395972:C:T	rs1854834	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr20	3406439	3406440	chr20:3406440:C:T	rs905208967	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr20	3888409	3888410	chr20:3888410:A:G	rs67724338	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr20	4007090	4007091	chr20:4007091:C:T	rs6107393	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr20	4075290	4075291	chr20:4075291:G:C	rs4383403	G	C	G	Hoxd3_MA0912.1	12	1	-	7.514156299144853	6.546634068205823	CTGGGGTCATGACACC
chr20	4317013	4317014	chr20:4317014:C:T	rs11696825	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr20	4637228	4637229	chr20:4637229:C:T	rs6084813	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr20	4637249	4637250	chr20:4637250:G:A	rs139763031	G	A	A	Hoxd3_MA0912.1	3	1	-	9.18390388173577	9.920585104315444	TTTCAGTAATTAATCT
chr20	4743044	4743045	chr20:4743045:C:T	rs2025118	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	4743054	4743055	chr20:4743055:A:G	rs2025117	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr20	4760657	4760658	chr20:4760658:T:C	rs4143674	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr20	4999758	4999759	chr20:4999759:C:T	rs1279682	C	T	C	Hoxd3_MA0912.1	14	1	+	8.951367689705028	8.387031243572737	TTGACTTAATTGACCG
chr20	5004695	5004696	chr20:5004696:A:T	rs6053030	A	T	T	Hoxd3_MA0912.1	15	1	-	10.049380212521015	8.384372448932105	TTTAATTAATTAATTT
chr20	5004726	5004727	chr20:5004727:C:T	rs6133184	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr20	5056377	5056378	chr20:5056378:G:A	rs261362	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	5393605	5393606	chr20:5393606:A:G	rs6076827	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr20	5608927	5608928	chr20:5608928:G:A	rs75324185	G	A	G	Hoxd3_MA0912.1	12	1	-	9.263783583367779	8.057031663362915	GTGGATTAATTACCAT
chr20	5608935	5608936	chr20:5608936:T:C	rs17211175	T	C	T	Hoxd3_MA0912.1	4	1	-	9.263783583367779	9.868020311880153	GTGGATTAATTACCAT
chr20	5675857	5675858	chr20:5675858:A:T	rs6053597	A	T	-	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	5745786	5745787	chr20:5745787:T:C	rs35015641	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr20	5980946	5980947	chr20:5980947:T:C	rs6117022	T	C	t	Hoxd3_MA0912.1	24	0	+	0	0	.
chr20	6005305	6005306	chr20:6005306:C:A	rs6117032	C	A	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr20	6006987	6006988	chr20:6006988:A:C	rs6139888	A	C	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr20	6637311	6637312	chr20:6637312:T:C	rs6085635	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr20	6676906	6676907	chr20:6676907:T:C	rs11087740	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr20	6705778	6705779	chr20:6705779:A:G	rs6085659	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	6940745	6940746	chr20:6940746:A:G	rs6085743	A	G	G	Hoxd3_MA0912.1	1	1	-	9.956324128274309	7.872263640738177	CTTGGCTAATTAAACC
chr20	7249042	7249043	chr20:7249043:C:T	rs17394617	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr20	7649960	7649961	chr20:7649961:C:T	rs6055225	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr20	7673725	7673726	chr20:7673726:G:A	rs4816017	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr20	7736422	7736423	chr20:7736423:A:G	rs193125981	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr20	7845770	7845771	chr20:7845771:A:G	rs6077270	A	G	G	Hoxd3_MA0912.1	1	1	-	8.69533560313216	6.61127511559603	CTGGACTAATGAATCC
chr20	8026984	8026985	chr20:8026985:C:T	rs143186814	C	T	C	Hoxd3_MA0912.1	0	1	+	9.226162358706217	9.278667856084146	CTGTTTTAATTAGTAT
chr20	8148843	8148844	chr20:8148844:C:A	rs8121126	C	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr20	8161757	8161758	chr20:8161758:T:C	rs2423343	T	C	T	Hoxd3_MA0912.1	13	1	+	8.15111236950539	8.755349098017764	CTGACTTAATTGGTCT
chr20	8222812	8222813	chr20:8222813:A:G	rs4399790	A	G	G	Hoxd3_MA0912.1	10	1	-	10.599350075135392	3.8196668325049656	CTGATGTAATTAAGGT
chr20	8389522	8389523	chr20:8389523:A:G	rs145906568	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr20	8390397	8390398	chr20:8390398:A:G	rs1232778	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	8602731	8602732	chr20:8602732:G:T	rs542686766	G	T	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr20	8722560	8722561	chr20:8722561:A:G	rs140035693	A	G	A	Hoxd3_MA0912.1	8	1	+	9.232077317567875	2.343504858002512	TTGAGGCAATTAAATG
chr20	8749464	8749465	chr20:8749465:C:T	rs2143264	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	8808433	8808434	chr20:8808434:T:A	rs6118328	T	A	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr20	8852617	8852618	chr20:8852618:C:T	rs78149399	C	T	c	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr20	8932089	8932090	chr20:8932090:C:A	rs6140800	C	A	A	Hoxd3_MA0912.1	0	1	+	11.13764991940938	10.473721284848574	CTGTATTAATTACTGT
chr20	9309178	9309179	chr20:9309179:A:G	rs6108280	A	G	A	Hoxd3_MA0912.1	9	1	-	7.730617975460195	0.8420455158948321	GTGAGGTAATTAAGCA
chr20	9689121	9689122	chr20:9689122:G:A	rs34088221	G	A	G	Hoxd3_MA0912.1	14	1	+	10.074081785843314	9.13011645607918	TTTGTATAATTAACGT
chr20	9985979	9985980	chr20:9985980:C:A	rs57257642	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr20	10174456	10174457	chr20:10174457:G:A	rs6032817	G	A	A	Hoxd3_MA0912.1	15	1	-	8.433113326038418	9.210817894626427	CTGAACCAATTACTTC
chr20	10185749	10185750	chr20:10185750:C:A	rs944873	C	A	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr20	10278496	10278497	chr20:10278497:G:A	rs34617618	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr20	10569895	10569896	chr20:10569896:C:T	rs76608422	C	T	C	Hoxd3_MA0912.1	1	1	-	9.041517782903696	9.899342056277886	AGGAGGTAATTAAATT
chr20	10659274	10659275	chr20:10659275:A:G	rs3790159	A	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr20	10978297	10978298	chr20:10978298:C:G	rs7353743	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr20	11003456	11003457	chr20:11003457:C:T	rs6040282	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr20	11003463	11003464	chr20:11003464:G:T	rs79682436	G	T	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr20	11045215	11045216	chr20:11045216:T:C	rs209941	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr20	11226558	11226559	chr20:11226559:C:T	rs6104726	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr20	11266903	11266904	chr20:11266904:A:G	rs6033076	A	G	G	Hoxd3_MA0912.1	15	1	-	8.608027619973535	7.830323051385527	CTCAAGCAATTAACGT
chr20	11457453	11457454	chr20:11457454:C:T	rs6040698	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	11738898	11738899	chr20:11738899:A:C	rs2423600	A	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr20	11766763	11766764	chr20:11766764:C:T	rs115539559	C	T	C	Hoxd3_MA0912.1	14	1	-	6.181574347315105	5.237609017550971	TTGGCCTCATGACCGG
chr20	11770560	11770561	chr20:11770561:C:G	rs75644773	C	G	G	Hoxd3_MA0912.1	2	1	+	9.104418050812157	10.887892468506106	TTCTGGTAATTACAGC
chr20	11806866	11806867	chr20:11806867:G:A	rs73084239	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr20	11851013	11851014	chr20:11851014:G:A	rs2243637	G	A	A	Hoxd3_MA0912.1	13	1	-	11.68422360840448	11.079986879892106	CAGAGTTAATTAACGT
chr20	12153933	12153934	chr20:12153934:T:A	rs2143522	T	A	A	Hoxd3_MA0912.1	8	1	-	9.253178960396024	4.762501773629032	TTGGATTAATTGCACC
chr20	12759874	12759875	chr20:12759875:A:G	rs6078754	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr20	12988448	12988449	chr20:12988449:T:C	rs752732026	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	13035491	13035492	chr20:13035492:T:A	rs77431978	T	A	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr20	13059605	13059606	chr20:13059606:G:T	rs4814194	G	T	G	Hoxd3_MA0912.1	14	1	+	8.290202613867125	7.902281533019282	CTTTGGCAATTAACGG
chr20	13098755	13098756	chr20:13098756:C:T	rs6033615	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr20	13277333	13277334	chr20:13277334:T:C	rs6078973	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr20	13331942	13331943	chr20:13331943:G:T	rs78720336	G	T	G	Hoxd3_MA0912.1	3	1	+	9.140981556969663	8.690742861876394	ATGGATTAATTGACCC
chr20	13334911	13334912	chr20:13334912:A:G	rs67609124	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr20	13517899	13517900	chr20:13517900:T:C	rs3789343	T	C	T	Hoxd3_MA0912.1	4	1	-	9.758745848366074	10.362982576878448	CTGAAGTAATTATCTG
chr20	13856960	13856961	chr20:13856961:T:C	rs6042394	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr20	14431853	14431854	chr20:14431854:C:G	rs6135144	C	G	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr20	15119104	15119105	chr20:15119105:A:G	rs1040882	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr20	15156540	15156541	chr20:15156541:C:T	rs463251	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr20	15923064	15923065	chr20:15923065:A:T	rs6043620	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr20	16115889	16115890	chr20:16115890:T:G	rs75353461	T	G	T	Hoxd3_MA0912.1	10	1	+	7.247412174328522	5.273469808148002	CAGAGACCATTACCCT
chr20	16539665	16539666	chr20:16539666:T:G	rs2092696	T	G	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr20	16759206	16759207	chr20:16759207:T:G	rs6080397	T	G	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	17344130	17344131	chr20:17344131:C:T	rs6136076	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	17344168	17344169	chr20:17344169:G:A	rs533760720	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr20	17495565	17495566	chr20:17495566:A:T	rs2239655	A	T	T	Hoxd3_MA0912.1	9	1	-	8.195806283751086	3.705129096984093	TTGAGCTAATTATGGA
chr20	17495587	17495588	chr20:17495588:C:T	rs6044849	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr20	17678979	17678980	chr20:17678980:C:G	rs981934317	C	G	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr20	17902886	17902887	chr20:17902887:C:A	rs8125763	C	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr20	17934608	17934609	chr20:17934609:G:C	rs59392111	G	C	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr20	17937749	17937750	chr20:17937750:T:A	rs754169	T	A	A	Hoxd3_MA0912.1	3	1	+	9.10401564718043	9.66835209331272	ATGTATTAATGAACGT
chr20	17937759	17937760	chr20:17937760:C:G	rs754170	C	G	C	Hoxd3_MA0912.1	13	1	+	9.10401564718043	7.525937736467348	ATGTATTAATGAACGT
chr20	17949661	17949662	chr20:17949662:T:C	rs11697739	T	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	18035030	18035031	chr20:18035031:C:T	rs79973349	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr20	18048007	18048008	chr20:18048008:C:T	rs6045163	C	T	c	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr20	18198898	18198899	chr20:18198899:C:T	rs6081036	C	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr20	18628703	18628704	chr20:18628704:C:T	rs2295572	C	T	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr20	18679512	18679513	chr20:18679513:A:G	rs17736093	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	18706145	18706146	chr20:18706146:G:A	rs75457713	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr20	18857723	18857724	chr20:18857724:G:A	rs11906860	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr20	19231500	19231501	chr20:19231501:G:A	rs6112264	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	19275949	19275950	chr20:19275950:C:A	rs186459924	C	A	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	19382691	19382692	chr20:19382692:A:G	rs6035315	A	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr20	19447247	19447248	chr20:19447248:G:A	rs1535020	G	A	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr20	19454636	19454637	chr20:19454637:C:G	rs1883693	C	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr20	19487800	19487801	chr20:19487801:C:T	rs6112410	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr20	19561289	19561290	chr20:19561290:C:T	rs6035376	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr20	19633879	19633880	chr20:19633880:A:C	rs6046215	A	C	A	Hoxd3_MA0912.1	1	1	-	9.737040062268902	7.652979574732772	ATGCTTTAATTAATGT
chr20	19844225	19844226	chr20:19844226:A:G	rs4814909	A	G	G	Hoxd3_MA0912.1	6	1	-	8.01771421998971	6.231788271808717	CTGAGGTAATGAAGTG
chr20	19850016	19850017	chr20:19850017:C:T	rs144325700	C	T	C	Hoxd3_MA0912.1	7	1	+	8.846386111342452	4.040645234892546	CTGTTCTCATTAAAGT
chr20	19850024	19850025	chr20:19850025:T:C	chr20:19850025:T:C	T	C	T	Hoxd3_MA0912.1	15	1	+	8.846386111342452	8.068681542754444	CTGTTCTCATTAAAGT
chr20	19860851	19860852	chr20:19860852:G:T	rs6075584	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr20	19899896	19899897	chr20:19899897:T:C	rs75814089	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr20	19978909	19978910	chr20:19978910:T:G	chr20:19978910:T:G	T	G	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	20650132	20650133	chr20:20650133:T:C	rs77785558	T	C	T	Hoxd3_MA0912.1	0	1	-	7.7462132189652735	6.42576542364297	ATGGGTTCATTATTCC
chr20	21062528	21062529	chr20:21062529:T:C	rs6082313	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr20	21202428	21202429	chr20:21202429:A:G	rs781709893	A	G	A	Hoxd3_MA0912.1	9	1	-	9.111735621879225	2.223163162313862	ATGATGTCATTAAACT
chr20	21202451	21202452	chr20:21202452:C:T	rs16982581	C	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr20	21837669	21837670	chr20:21837670:G:A	rs1535199	G	A	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr20	22576098	22576099	chr20:22576099:A:G	rs114243373	A	G	A	Hoxd3_MA0912.1	10	1	-	10.95706604600334	4.177382803372914	TTGACTTAATTACACT
chr20	22616976	22616977	chr20:22616977:A:G	rs1572579	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr20	23025573	23025574	chr20:23025574:T:A	rs2103760	T	A	T	Hoxd3_MA0912.1	1	1	+	8.022717482214196	6.7964812680522595	CTGTTTTAATGAGCGC
chr20	23128497	23128498	chr20:23128498:C:A	rs117530969	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr20	23162328	23162329	chr20:23162329:C:T	rs4815179	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	23269050	23269051	chr20:23269051:G:A	rs6137878	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr20	23358120	23358121	chr20:23358121:C:T	rs576616300	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr20	23445547	23445548	chr20:23445548:C:T	rs76308965	C	T	c	Hoxd3_MA0912.1	30	0	-	0	0	.
chr20	23650961	23650962	chr20:23650962:C:G	rs73102363	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr20	23650964	23650965	chr20:23650965:A:G	rs73102364	A	G	A	Hoxd3_MA0912.1	15	1	-	8.376435402470259	7.598730833882251	TTGGGCCAATTAGGCT
chr20	24244373	24244374	chr20:24244374:C:T	rs112837	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	24297060	24297061	chr20:24297061:G:A	rs76587763	G	A	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr20	24303606	24303607	chr20:24303607:T:C	rs6106833	T	C	t	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr20	24303626	24303627	chr20:24303627:G:A	rs6106834	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	24353776	24353777	chr20:24353777:A:T	rs6049620	A	T	T	Hoxd3_MA0912.1	9	1	-	8.839291827016659	4.348614640249666	CTAAGATAATTAACAG
chr20	24642557	24642558	chr20:24642558:G:A	rs79309723	G	A	G	Hoxd3_MA0912.1	5	1	-	8.110801204283769	8.428122646170177	ATGAACCAATTAATGG
chr20	24669370	24669371	chr20:24669371:A:G	rs34439537	A	G	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr20	24743829	24743830	chr20:24743830:A:G	rs4815304	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr20	24768548	24768549	chr20:24768549:C:T	rs79657637	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	24771589	24771590	chr20:24771590:A:C	rs6132764	A	C	C	Hoxd3_MA0912.1	14	1	+	9.66479662103277	10.78517731608135	GTGAGCTAATTAACAT
chr20	24779157	24779158	chr20:24779158:C:T	rs4813537	C	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	24875905	24875906	chr20:24875906:G:A	rs6050071	G	A	G	Hoxd3_MA0912.1	14	1	+	8.459228331799281	7.515263002035149	ATGGTCTCATTACCGC
chr20	24914151	24914152	chr20:24914152:C:G	rs186587489	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr20	25049683	25049684	chr20:25049684:G:C	rs146344085	G	C	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr20	25049702	25049703	chr20:25049703:G:A	rs73906065	G	A	g	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr20	25077061	25077062	chr20:25077062:G:A	rs6083734	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr20	25519851	25519852	chr20:25519852:T:C	rs6050658	T	C	T	Hoxd3_MA0912.1	11	1	-	8.007268995898537	6.221343047717543	CCCGGCTAATTACTGT
chr20	25606102	25606103	chr20:25606103:T:A	rs59046052	T	A	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr20	25624890	25624891	chr20:25624891:A:G	rs16987934	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr20	25624913	25624914	chr20:25624914:C:T	rs6037164	C	T	C	Hoxd3_MA0912.1	4	1	-	7.757228848270522	7.152992119758148	ATCAGGTAATTGGCCT
chr20	25749803	25749804	chr20:25749804:C:G	rs6138651	C	G	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr20	26008347	26008348	chr20:26008348:C:A	rs6107130	C	A	.	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr20	26010649	26010650	chr20:26010650:C:T	rs377679219	C	T	.	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr20	28557887	28557888	chr20:28557888:T:A	rs1243471155	T	A	.	Hoxd3_MA0912.1	35	0	+	0	0	.
chr20	29300035	29300036	chr20:29300036:C:T	rs1344295330	C	T	.	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr20	29300036	29300037	chr20:29300037:A:G	rs1291756241	A	G	.	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	29300068	29300069	chr20:29300069:A:G	rs36146160	A	G	.	Hoxd3_MA0912.1	19	0	+	0	0	.
chr20	29443941	29443942	chr20:29443942:T:C	rs1356349735	T	C	.	Hoxd3_MA0912.1	27	0	+	0	0	.
chr20	30285833	30285834	chr20:30285834:G:T	rs6087200	G	T	.	Hoxd3_MA0912.1	12	1	-	7.939747107313021	7.939747107313021	TTGGAGCAATTGCTGT
chr20	30484555	30484556	chr20:30484556:G:A	rs1419588027	G	A	.	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr20	31072419	31072420	chr20:31072420:T:G	rs1483208298	T	G	.	Hoxd3_MA0912.1	21	0	-	0	0	.
chr20	31072421	31072422	chr20:31072422:T:C	rs914780463	T	C	.	Hoxd3_MA0912.1	19	0	-	0	0	.
chr20	31278538	31278539	chr20:31278539:C:T	rs976627155	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr20	31595794	31595795	chr20:31595795:T:C	rs412142	T	C	T	Hoxd3_MA0912.1	4	1	-	9.388315398109393	9.992552126621767	CTGAATTCATTACCAT
chr20	31719395	31719396	chr20:31719396:C:A	rs3181073	C	A	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	31972522	31972523	chr20:31972523:C:T	rs140563488	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	32155492	32155493	chr20:32155493:G:C	chr20:32155493:G:C	G	C	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr20	32536406	32536407	chr20:32536407:G:C	rs536647333	G	C	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr20	32536414	32536415	chr20:32536415:T:C	rs555007806	T	C	T	Hoxd3_MA0912.1	6	1	+	6.629881129739024	4.84395518155803	CCGCGCTAATGACTGT
chr20	32536416	32536417	chr20:32536417:A:C	rs570126409	A	C	A	Hoxd3_MA0912.1	8	1	+	6.629881129739024	2.1392039429720313	CCGCGCTAATGACTGT
chr20	32577215	32577216	chr20:32577216:G:A	rs911526	G	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr20	32806539	32806540	chr20:32806540:C:T	rs73260147	C	T	C	Hoxd3_MA0912.1	7	1	+	6.996904368663852	2.191163492213943	ATGAGGTCATTAGGCC
chr20	32828115	32828116	chr20:32828116:G:A	rs242546	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr20	32828141	32828142	chr20:32828142:C:G	rs62207057	C	G	C	Hoxd3_MA0912.1	12	1	+	8.786811401819925	7.8192891708808965	CAGCATTAATTACTTT
chr20	32914525	32914526	chr20:32914526:A:C	rs6119304	A	C	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr20	32914552	32914553	chr20:32914553:G:C	rs6058955	G	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr20	33133975	33133976	chr20:33133976:A:G	rs6088118	A	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr20	33445218	33445219	chr20:33445219:G:A	rs4911339	G	A	G	Hoxd3_MA0912.1	6	1	-	7.847936043135999	9.633861991316993	CTAGGCCAATTAGACT
chr20	33725672	33725673	chr20:33725673:C:T	rs6059430	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr20	33915935	33915936	chr20:33915936:G:A	chr20:33915936:G:A	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr20	33979623	33979624	chr20:33979624:G:A	rs6142077	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr20	34448913	34448914	chr20:34448914:A:G	rs73902637	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr20	34666524	34666525	chr20:34666525:A:T	rs6059973	A	T	T	Hoxd3_MA0912.1	11	1	+	10.049380212521015	5.711689151426974	TTTAATTAATTAATTT
chr20	34879913	34879914	chr20:34879914:T:C	rs6087641	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr20	34938694	34938695	chr20:34938695:C:G	rs559108212	C	G	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr20	35176828	35176829	chr20:35176829:C:G	rs9574	C	G	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr20	35479164	35479165	chr20:35479165:C:T	rs17332774	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	37335794	37335795	chr20:37335795:C:T	rs6011973	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr20	37347694	37347695	chr20:37347695:G:A	rs6011996	G	A	A	Hoxd3_MA0912.1	2	1	+	7.635208390785719	6.18537334662868	CAGTGGTAATGACAGC
chr20	37366495	37366496	chr20:37366496:G:C	rs3940202	G	C	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	37376911	37376912	chr20:37376912:T:G	rs6090575	T	G	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr20	37376933	37376934	chr20:37376934:G:A	rs6090576	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr20	37413042	37413043	chr20:37413043:C:G	rs73299338	C	G	.	Hoxd3_MA0912.1	20	0	+	0	0	.
chr20	37426095	37426096	chr20:37426096:T:C	rs58147836	T	C	.	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr20	37598247	37598248	chr20:37598248:T:G	rs910597	T	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr20	37600219	37600220	chr20:37600220:C:T	rs2144504	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr20	37679503	37679504	chr20:37679504:C:T	rs960828738	C	T	C	Hoxd3_MA0912.1	2	1	-	7.770407676163455	6.3205726320064155	TCGGATTAATTGCTGT
chr20	37816086	37816087	chr20:37816087:C:T	rs55722198	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr20	38114562	38114563	chr20:38114563:A:G	rs73905548	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr20	38226716	38226717	chr20:38226717:C:T	rs6098592	C	T	C	Hoxd3_MA0912.1	15	1	+	8.418581937681633	9.196286506269642	CTGTATTAATTAGGGC
chr20	38389188	38389189	chr20:38389189:G:A	rs6025355	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	38686030	38686031	chr20:38686031:G:A	rs6027258	G	A	G	Hoxd3_MA0912.1	4	1	-	6.242813201247622	7.21665438344833	CAGCCGCAATTACCCG
chr20	38752983	38752984	chr20:38752984:G:A	rs2254603	G	A	g	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr20	39195772	39195773	chr20:39195773:C:A	rs6129216	C	A	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr20	39237259	39237260	chr20:39237260:C:T	rs59180307	C	T	C	Hoxd3_MA0912.1	15	1	+	7.617310070799974	8.395014639387982	GTGAGCCAATTAAACC
chr20	39491962	39491963	chr20:39491963:A:G	rs6129343	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr20	39619671	39619672	chr20:39619672:C:A	rs80022923	C	A	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr20	39853740	39853741	chr20:39853741:C:T	rs114485429	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr20	39893678	39893679	chr20:39893679:G:A	rs10485663	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	39954630	39954631	chr20:39954631:G:T	rs542873992	G	T	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr20	40264381	40264382	chr20:40264382:G:A	rs78356640	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr20	40635110	40635111	chr20:40635111:A:C	rs6029241	A	C	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr20	40842786	40842787	chr20:40842787:T:C	rs6072161	T	C	T	Hoxd3_MA0912.1	12	1	+	7.171484726816892	8.378236646821756	TTGGCCTCATTATCCC
chr20	41099222	41099223	chr20:41099223:T:C	rs13037857	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr20	41552452	41552453	chr20:41552453:T:C	rs6102460	T	C	T	Hoxd3_MA0912.1	9	1	+	8.87691638592941	1.9883439263640486	ATATGTTAATTAGCTT
chr20	41594764	41594765	chr20:41594765:G:A	rs143253764	G	A	G	Hoxd3_MA0912.1	3	1	+	7.507977718337411	7.622075469376435	CTCGCCTAATTGACCT
chr20	41594776	41594777	chr20:41594777:T:G	rs6093498	T	G	T	Hoxd3_MA0912.1	15	1	+	7.507977718337411	6.683968581707716	CTCGCCTAATTGACCT
chr20	41987290	41987291	chr20:41987291:T:C	rs78369927	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr20	42178683	42178684	chr20:42178684:C:G	rs6016708	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	42178687	42178688	chr20:42178688:A:G	rs6016709	A	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	42191703	42191704	chr20:42191704:C:T	rs111956108	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr20	42374119	42374120	chr20:42374120:C:T	rs976431	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr20	42374120	42374121	chr20:42374121:G:A	rs77780634	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr20	42441891	42441892	chr20:42441892:G:A	rs760703	G	A	G	Hoxd3_MA0912.1	14	1	+	8.46634759395153	7.522382264187396	GTGTCCTAATTAACGT
chr20	42928260	42928261	chr20:42928261:C:A	rs206636	C	A	A	Hoxd3_MA0912.1	2	1	-	9.944562833158727	8.627372263607983	CTGTGATAATTAAAAT
chr20	42991566	42991567	chr20:42991567:T:C	rs74967346	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr20	43211039	43211040	chr20:43211040:C:T	rs2103549	C	T	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr20	43211074	43211075	chr20:43211075:G:A	rs2103548	G	A	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr20	43373809	43373810	chr20:43373810:G:T	rs6103260	G	T	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	43383147	43383148	chr20:43383148:C:T	rs13036684	C	T	C	Hoxd3_MA0912.1	12	1	+	9.04995526954864	7.843203349543776	TTGAACCAATTACTCC
chr20	43383164	43383165	chr20:43383165:C:T	rs1883544	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr20	43462222	43462223	chr20:43462223:T:G	rs73289575	T	G	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr20	43489840	43489841	chr20:43489841:G:T	rs6073109	G	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr20	43492493	43492494	chr20:43492494:T:A	rs6103348	T	A	T	Hoxd3_MA0912.1	15	1	+	10.049380212521015	8.384372448932105	TTTAATTAATTAATTT
chr20	43560568	43560569	chr20:43560569:G:T	rs6030959	G	T	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr20	43560570	43560571	chr20:43560571:C:T	rs6030960	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	43787748	43787749	chr20:43787749:T:C	rs6073197	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr20	43849578	43849579	chr20:43849579:C:G	rs2017979	C	G	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	43927862	43927863	chr20:43927863:T:C	rs73118230	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr20	43959713	43959714	chr20:43959714:C:T	rs78383100	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr20	44099997	44099998	chr20:44099998:T:C	rs6031378	T	C	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr20	44186249	44186250	chr20:44186250:G:A	rs75804573	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	44867890	44867891	chr20:44867891:A:C	rs561279042	A	C	A	Hoxd3_MA0912.1	7	1	+	9.113677236684959	7.139734870504439	ATCATCTAATTACTCT
chr20	44867904	44867905	chr20:44867905:G:C	rs116351336	G	C	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	44954709	44954710	chr20:44954710:C:G	rs75349244	C	G	C	Hoxd3_MA0912.1	5	1	+	8.726074054780298	8.914600388461135	TTCTTCTAATTAGCGT
chr20	44980336	44980337	chr20:44980337:G:C	rs2267857	G	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	45015389	45015390	chr20:45015390:T:C	rs2284272	T	C	T	Hoxd3_MA0912.1	11	1	-	9.182558660761458	7.396632712580466	ATGTCCTAATTACTGT
chr20	45018052	45018053	chr20:45018053:A:G	rs6065773	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	45121476	45121477	chr20:45121477:T:C	rs62206433	T	C	t	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr20	45337262	45337263	chr20:45337263:A:G	rs2267867	A	G	A	Hoxd3_MA0912.1	9	1	-	9.018995165586745	2.130422706021381	TTGAATTAATTAGTAG
chr20	46179346	46179347	chr20:46179347:G:A	rs6131030	G	A	G	Hoxd3_MA0912.1	2	1	+	6.5081578838643335	5.058322839707293	CTGGGTTCCTTACCCT
chr20	46269250	46269251	chr20:46269251:A:G	rs2425825	A	G	A	Hoxd3_MA0912.1	8	1	+	7.133983568880852	0.24541110931548893	CTGCTCCAATTACCAG
chr20	46284002	46284003	chr20:46284003:G:A	rs4813017	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr20	46284004	46284005	chr20:46284005:C:T	rs4810493	C	T	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr20	46635264	46635265	chr20:46635265:A:C	rs2425888	A	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr20	46814867	46814868	chr20:46814868:G:A	rs76294239	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr20	46971640	46971641	chr20:46971641:G:A	rs13041757	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr20	46971669	46971670	chr20:46971670:C:T	rs13041611	C	T	T	Hoxd3_MA0912.1	4	1	-	9.878084684778724	9.27384795626635	CTGTGCTAATTATCAT
chr20	47029997	47029998	chr20:47029998:A:G	rs4810589	A	G	A	Hoxd3_MA0912.1	8	1	+	7.412967575796023	0.5243951162306618	CTGTCCCAATTACTCG
chr20	47185055	47185056	chr20:47185056:A:C	rs8115769	A	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr20	47303042	47303043	chr20:47303043:C:T	rs6124993	C	T	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	47416683	47416684	chr20:47416684:G:A	rs6018470	G	A	G	Hoxd3_MA0912.1	13	1	-	7.75524791403795	7.151011185525576	CTGATTCAATGAGCCT
chr20	47726652	47726653	chr20:47726653:C:A	rs6066450	C	A	C	Hoxd3_MA0912.1	13	1	+	8.989525778775135	8.385289050262763	TAATTGTAATTAACGT
chr20	47809330	47809331	chr20:47809331:T:C	rs4810702	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr20	47881854	47881855	chr20:47881855:C:T	rs976941	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr20	47949358	47949359	chr20:47949359:C:T	rs2869313	C	T	T	Hoxd3_MA0912.1	14	1	+	8.563264292436017	7.998927846303726	ATGACATAATTACACG
chr20	47963747	47963748	chr20:47963748:C:T	rs11086233	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr20	48179841	48179842	chr20:48179842:C:T	rs852340	C	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr20	48213207	48213208	chr20:48213208:C:T	rs6125252	C	T	C	Hoxd3_MA0912.1	12	1	-	7.261511106867095	8.229033337806126	CTGAGCCAATGAGTGT
chr20	48316638	48316639	chr20:48316639:A:G	rs393273	A	G	A	Hoxd3_MA0912.1	9	1	-	9.49919440570014	2.610621946134777	TTTGTTTAATTAAAGG
chr20	48565097	48565098	chr20:48565098:G:A	rs7263262	G	A	A	Hoxd3_MA0912.1	1	1	-	7.652604853349363	9.73666534088549	ACGGGTTAATTAGAGG
chr20	48730178	48730179	chr20:48730179:G:A	rs73138219	G	A	g	Hoxd3_MA0912.1	16	0	+	0	0	.
chr20	48750064	48750065	chr20:48750065:A:G	rs2869671	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr20	48756862	48756863	chr20:48756863:G:C	rs147450643	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr20	48923821	48923822	chr20:48923822:C:A	rs111349356	C	A	c	Hoxd3_MA0912.1	26	0	-	0	0	.
chr20	48923830	48923831	chr20:48923831:G:A	rs115750703	G	A	a	Hoxd3_MA0912.1	17	0	-	0	0	.
chr20	48923838	48923839	chr20:48923839:A:G	rs952898853	A	G	a	Hoxd3_MA0912.1	9	1	-	6.799752990615451	-0.0888194689499111	CAGCGTTAATGGCCCT
chr20	49020605	49020606	chr20:49020606:C:T	rs3092801	C	T	C	Hoxd3_MA0912.1	2	1	+	8.549161979959889	9.015445828103093	TTCGGCTAATTATTTT
chr20	49103848	49103849	chr20:49103849:G:C	rs6125551	G	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr20	49133030	49133031	chr20:49133031:T:C	rs527996301	T	C	T	Hoxd3_MA0912.1	9	1	+	9.440820895487324	2.5522484359219617	TTGAGTTAATGAATAT
chr20	49133046	49133047	chr20:49133047:C:T	rs570191982	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr20	49133047	49133048	chr20:49133048:G:A	rs6095449	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr20	49307220	49307221	chr20:49307221:A:G	rs171109	A	G	A	Hoxd3_MA0912.1	6	1	-	8.997637870840201	7.211711922659207	ATGGAGTCATTAATCT
chr20	49411961	49411962	chr20:49411962:A:T	rs6067093	A	T	T	Hoxd3_MA0912.1	2	1	+	9.804538334488358	9.937182809094653	ATAAGTTAATTAATTT
chr20	49727897	49727898	chr20:49727898:T:C	rs11698635	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	49769943	49769944	chr20:49769944:G:T	rs663573	G	T	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr20	49769971	49769972	chr20:49769972:A:G	rs586837	A	G	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr20	49813527	49813528	chr20:49813528:G:C	rs74273888	G	C	g	Hoxd3_MA0912.1	14	1	+	8.790874285928146	8.967289651212594	CGTGATTAATTAACGT
chr20	49818870	49818871	chr20:49818871:G:A	rs719219	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr20	49822034	49822035	chr20:49822035:T:C	rs6020069	T	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr20	49823647	49823648	chr20:49823648:A:G	rs112144705	A	G	A	Hoxd3_MA0912.1	8	1	+	9.03094576888919	2.142373309323826	CTGTGCCAATTAACTG
chr20	49855328	49855329	chr20:49855329:T:C	rs6020086	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	49980742	49980743	chr20:49980743:T:A	rs5014389	T	A	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr20	49983797	49983798	chr20:49983798:G:A	rs111949175	G	A	.	Hoxd3_MA0912.1	14	1	+	10.864589890905231	9.920624561141098	ATGATTTAATTAACGC
chr20	50059828	50059829	chr20:50059829:G:A	rs760087713	G	A	g	Hoxd3_MA0912.1	2	1	-	6.4190178359434364	6.885301684086641	TCCGGGCAATTACCCG
chr20	50070877	50070878	chr20:50070878:A:T	rs9712448	A	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr20	50076556	50076557	chr20:50076557:C:T	rs8118700	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr20	50171597	50171598	chr20:50171598:C:G	chr20:50171598:C:G	C	G	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr20	50246884	50246885	chr20:50246885:T:G	rs6063493	T	G	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr20	50328450	50328451	chr20:50328451:C:A	rs6091135	C	A	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr20	50518253	50518254	chr20:50518254:A:G	rs79684096	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr20	50518280	50518281	chr20:50518281:A:T	rs78411912	A	T	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr20	50769713	50769714	chr20:50769714:C:T	rs201012801	C	T	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr20	50850945	50850946	chr20:50850946:G:A	rs73280625	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr20	51087280	51087281	chr20:51087281:C:T	rs10485616	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr20	51127011	51127012	chr20:51127012:C:T	rs6067654	C	T	T	Hoxd3_MA0912.1	12	1	+	9.144556778108914	7.93780485810405	TTGATTTAATTGCAGG
chr20	51659786	51659787	chr20:51659787:T:G	rs2426355	T	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr20	52119009	52119010	chr20:52119010:G:A	rs62216893	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	52530228	52530229	chr20:52530229:C:T	rs139114361	C	T	C	Hoxd3_MA0912.1	4	1	-	8.031580205444854	7.42734347693248	CTCTGCCAATTAATCT
chr20	52618958	52618959	chr20:52618959:A:G	rs13040587	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr20	52737677	52737678	chr20:52737678:A:G	rs241796	A	G	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr20	52764045	52764046	chr20:52764046:C:G	rs6097109	C	G	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	52978376	52978377	chr20:52978377:C:T	rs13042084	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr20	52995009	52995010	chr20:52995010:G:A	rs2248269	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr20	53003552	53003553	chr20:53003553:A:G	rs76117855	A	G	A	Hoxd3_MA0912.1	3	1	+	8.67586669411707	8.561768943078047	TTGAGGTAATTGTCTC
chr20	53041641	53041642	chr20:53041642:C:T	rs76803931	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr20	53104849	53104850	chr20:53104850:C:A	rs17390526	C	A	A	Hoxd3_MA0912.1	13	1	+	8.359947047509284	7.755710318996909	TCGAAGCAATTACCGT
chr20	53331116	53331117	chr20:53331117:G:A	rs200607	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr20	53554013	53554014	chr20:53554014:T:C	rs6022585	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr20	53691815	53691816	chr20:53691816:G:A	rs142049035	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr20	53696290	53696291	chr20:53696291:A:G	rs16998327	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	53726963	53726964	chr20:53726964:C:T	rs75006992	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr20	53832261	53832262	chr20:53832262:C:T	rs73272075	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	53898976	53898977	chr20:53898977:C:T	rs6022839	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr20	54059108	54059109	chr20:54059109:C:T	rs290430	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr20	54079803	54079804	chr20:54079804:T:C	rs6022947	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr20	54269510	54269511	chr20:54269511:A:G	rs292136	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr20	54606790	54606791	chr20:54606791:T:C	rs6014081	T	C	T	Hoxd3_MA0912.1	3	1	+	8.384403838722806	7.647722616143133	TTGTGGTCATTAGCAT
chr20	54640969	54640970	chr20:54640970:C:T	rs6091941	C	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr20	54726727	54726728	chr20:54726728:T:C	rs6098206	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr20	54726766	54726767	chr20:54726767:T:C	rs6098207	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	55165843	55165844	chr20:55165844:A:G	rs6023931	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr20	55415765	55415766	chr20:55415766:C:A	rs138954827	C	A	C	Hoxd3_MA0912.1	4	1	-	9.357829970325747	8.753593241813372	TTTGGTTAATTGCCTT
chr20	55488825	55488826	chr20:55488826:T:C	rs6123499	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	55531487	55531488	chr20:55531488:C:T	rs36182339	C	T	c	Hoxd3_MA0912.1	35	0	+	0	0	.
chr20	55919921	55919922	chr20:55919922:G:A	rs6014555	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	55928379	55928380	chr20:55928380:G:C	rs228984	G	C	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr20	56690552	56690553	chr20:56690553:A:G	rs6014792	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr20	56818987	56818988	chr20:56818988:C:T	rs6014832	C	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr20	56878365	56878366	chr20:56878366:G:T	rs12480079	G	T	G	Hoxd3_MA0912.1	12	1	-	8.690742861876394	8.690742861876394	ATGATTCAATTACCTC
chr20	57191181	57191182	chr20:57191182:G:A	rs12479955	G	A	G	Hoxd3_MA0912.1	7	1	-	9.058861049000935	4.253120172551027	CTAAGTTCATTAATCT
chr20	57224871	57224872	chr20:57224872:C:T	rs144369055	C	T	C	Hoxd3_MA0912.1	2	1	+	6.690862789131963	7.157146637275166	CTCGGCTCATTATCGG
chr20	57224882	57224883	chr20:57224883:C:T	rs73914173	C	T	C	Hoxd3_MA0912.1	13	1	+	6.690862789131963	6.086626060619589	CTCGGCTCATTATCGG
chr20	57241897	57241898	chr20:57241898:G:T	rs79542662	G	T	G	Hoxd3_MA0912.1	15	1	-	9.677844688967582	8.79054149396668	TAGAGATAATTAAACC
chr20	57382004	57382005	chr20:57382005:G:C	rs1384220660	G	C	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr20	57593705	57593706	chr20:57593706:C:T	rs6128091	C	T	c	Hoxd3_MA0912.1	27	0	+	0	0	.
chr20	57717090	57717091	chr20:57717091:C:T	rs76621877	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr20	57725785	57725786	chr20:57725786:G:A	rs13037772	G	A	G	Hoxd3_MA0912.1	4	1	-	6.963025653562956	7.936866835763665	ATGGCGTAATGACCCA
chr20	57736499	57736500	chr20:57736500:G:C	rs117393626	G	C	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr20	57743584	57743585	chr20:57743585:T:C	rs1884908	T	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	57761673	57761674	chr20:57761674:A:T	rs6070254	A	T	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr20	57893547	57893548	chr20:57893548:T:C	rs6015125	T	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr20	57901301	57901302	chr20:57901302:G:A	rs6025881	G	A	G	Hoxd3_MA0912.1	2	1	+	7.653095838958757	6.203260794801718	CTGTGCTCATGACACT
chr20	57907605	57907606	chr20:57907606:C:T	rs437420	C	T	C	Hoxd3_MA0912.1	15	1	+	8.674064552124136	9.451769120712145	CTGAGCTAATTGGCTC
chr20	57930674	57930675	chr20:57930675:A:G	rs62206175	A	G	A	Hoxd3_MA0912.1	13	1	-	7.912813591549408	8.517050320061783	CTCAGTCAATTAATGG
chr20	57930679	57930680	chr20:57930680:T:C	rs558129086	T	C	T	Hoxd3_MA0912.1	8	1	-	7.912813591549408	1.0242411319840474	CTCAGTCAATTAATGG
chr20	57995784	57995785	chr20:57995785:A:G	rs10485811	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr20	57995788	57995789	chr20:57995789:A:G	rs10485812	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr20	58055016	58055017	chr20:58055017:G:A	rs142329823	G	A	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	58072109	58072110	chr20:58072110:G:A	rs6015181	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr20	58140854	58140855	chr20:58140855:T:C	rs6128272	T	C	T	Hoxd3_MA0912.1	6	1	+	8.954354202046598	7.1684282538656054	TTTAACTAATTACATC
chr20	58175129	58175130	chr20:58175130:G:A	rs77147533	G	A	G	Hoxd3_MA0912.1	13	1	-	10.648195016974146	10.043958288461772	ATGGGGTAATTAGCTT
chr20	58341750	58341751	chr20:58341751:G:T	rs78941534	G	T	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr20	58718782	58718783	chr20:58718783:A:G	rs750230865	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr20	58756153	58756154	chr20:58756154:C:T	rs74549836	C	T	C	Hoxd3_MA0912.1	3	1	-	6.997502416927335	7.111600167966359	CTGGGCCCATTAACAC
chr20	58883331	58883332	chr20:58883332:G:A	rs117844021	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr20	59064530	59064531	chr20:59064531:G:A	rs6100323	G	A	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	59087668	59087669	chr20:59087669:T:C	rs10485829	T	C	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr20	59385139	59385140	chr20:59385140:T:G	rs13037625	T	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr20	59434832	59434833	chr20:59434833:A:G	rs275335	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr20	59454254	59454255	chr20:59454255:A:C	rs56858342	A	C	A	Hoxd3_MA0912.1	7	1	+	8.644119837394875	6.670177471214355	TTTGCCTAATTACATT
chr20	59603171	59603172	chr20:59603172:C:G	rs6026992	C	G	C	Hoxd3_MA0912.1	14	1	-	9.254583313286917	9.430998678571365	ATCATTTAATTACAGT
chr20	59612832	59612833	chr20:59612833:G:A	rs12625731	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr20	59649129	59649130	chr20:59649130:T:C	rs79565556	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr20	59749406	59749407	chr20:59749407:T:C	rs115234090	T	C	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr20	59775073	59775074	chr20:59775074:G:A	rs6027092	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr20	59927592	59927593	chr20:59927593:C:T	rs964732	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr20	59992751	59992752	chr20:59992752:A:G	chr20:59992752:A:G	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr20	60076935	60076936	chr20:60076936:T:C	rs242817	T	C	C	Hoxd3_MA0912.1	13	1	-	7.8241230062110585	6.8502818240103505	CCGATGTAATTACAGA
chr20	60332775	60332776	chr20:60332776:T:A	rs75267882	T	A	T	Hoxd3_MA0912.1	13	1	-	9.181872963813731	9.181872963813731	TTTGTCTAATTACAGG
chr20	60564482	60564483	chr20:60564483:G:A	rs76088728	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr20	60586945	60586946	chr20:60586946:C:T	rs846188	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr20	61045494	61045495	chr20:61045495:A:G	rs6015907	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr20	61100063	61100064	chr20:61100064:A:G	rs141193182	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr20	61120900	61120901	chr20:61120901:T:C	rs6071497	T	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr20	61183126	61183127	chr20:61183127:A:G	rs79712054	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr20	61210635	61210636	chr20:61210636:A:G	rs6124074	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr20	61311295	61311296	chr20:61311296:G:C	rs6028104	G	C	G	Hoxd3_MA0912.1	0	1	-	9.340122918513309	7.355746488630201	CTGATTTCATTACTTT
chr20	61332646	61332647	chr20:61332647:C:T	rs35750489	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr20	61337919	61337920	chr20:61337920:A:G	chr20:61337920:A:G	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr20	61337953	61337954	chr20:61337954:A:G	rs6028126	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr20	61533632	61533633	chr20:61533633:A:G	rs4925186	A	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr20	61533656	61533657	chr20:61533657:A:G	rs4925187	A	G	G	Hoxd3_MA0912.1	3	1	-	6.441408202720709	5.704726980141034	CAGTGCTAATGGCCCC
chr20	61555701	61555702	chr20:61555702:T:C	rs1936203	T	C	t	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr20	61640776	61640777	chr20:61640777:T:A	rs6061689	T	A	T	Hoxd3_MA0912.1	11	1	-	9.220877196074412	4.88318613498037	CATGTTTAATTAATCT
chr20	61673676	61673677	chr20:61673677:T:C	rs944256	T	C	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr20	61760827	61760828	chr20:61760828:C:G	rs11700103	C	G	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr20	61760857	61760858	chr20:61760858:A:G	rs6061805	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr20	62203151	62203152	chr20:62203152:G:T	rs1047154	G	T	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr20	62352988	62352989	chr20:62352989:G:A	rs2427298	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr20	62353011	62353012	chr20:62353012:C:T	rs28372948	C	T	C	Hoxd3_MA0912.1	4	1	-	6.928525584775475	6.3242888562631006	CTGCGGTCATGACTGT
chr20	62507883	62507884	chr20:62507884:G:T	rs6089232	G	T	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr20	62507908	62507909	chr20:62507909:G:T	rs73918250	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr20	62516258	62516259	chr20:62516259:C:T	rs62197861	C	T	C	Hoxd3_MA0912.1	14	1	-	8.102922412910868	7.158957083146736	TTGGCTCAATTAATGC
chr20	62577280	62577281	chr20:62577281:C:T	rs900561690	C	T	c	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr20	62577282	62577283	chr20:62577283:C:T	rs3813451	C	T	c	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr20	62583961	62583962	chr20:62583962:T:G	rs28509342	T	G	g	Hoxd3_MA0912.1	11	1	-	7.815726238687707	1.0710900692753769	CTGTCCTAATTATTGG
chr20	62791817	62791818	chr20:62791818:T:A	rs149119764	T	A	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr20	62969365	62969366	chr20:62969366:C:A	rs117282514	C	A	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr20	62980047	62980048	chr20:62980048:G:C	rs4141975	G	C	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr20	62981169	62981170	chr20:62981170:A:G	rs75230767	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr20	63103051	63103052	chr20:63103052:G:A	rs2427497	G	A	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr20	63122616	63122617	chr20:63122617:G:C	rs13040734	G	C	g	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr20	63217912	63217913	chr20:63217913:T:G	rs56946612	T	G	G	Hoxd3_MA0912.1	5	1	+	9.606459709828352	9.47766460162278	GTGGGTTAATTACTCC
chr20	63253565	63253566	chr20:63253566:G:A	rs140682227	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr20	63485265	63485266	chr20:63485266:C:T	rs73150407	C	T	c	Hoxd3_MA0912.1	31	0	-	0	0	.
chr20	64130345	64130346	chr20:64130346:G:A	rs6062643	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr21	5236073	5236074	chr21:5236074:T:G	rs1345697335	T	G	.	Hoxd3_MA0912.1	26	0	-	0	0	.
chr21	9014825	9014826	chr21:9014826:G:T	rs74334426	G	T	.	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr21	9741552	9741553	chr21:9741553:A:G	rs28544340	A	G	.	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr21	10383984	10383985	chr21:10383985:A:G	rs74892146	A	G	.	Hoxd3_MA0912.1	35	0	-	0	0	.
chr21	10427796	10427797	chr21:10427797:G:A	rs75114184	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr21	10429239	10429240	chr21:10429240:G:C	rs10433144	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr21	10429770	10429771	chr21:10429771:C:T	rs3904136	C	T	C	Hoxd3_MA0912.1	13	1	+	9.785425167273925	9.18118843876155	ATGTGGTAATTAACAG
chr21	10429775	10429776	chr21:10429776:A:G	rs4324411	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr21	10459290	10459291	chr21:10459291:C:T	rs2989068	C	T	N	Hoxd3_MA0912.1	14	1	-	8.17466617783913	7.2307008480749975	CTCAACTAATTATCGG
chr21	14107215	14107216	chr21:14107216:C:T	rs4539869	C	T	t	Hoxd3_MA0912.1	2	1	-	7.922352644746287	6.472517600589247	TTGACTTCATTACCCA
chr21	14241379	14241380	chr21:14241380:C:T	rs9978140	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr21	14277200	14277201	chr21:14277201:T:G	rs4816274	T	G	G	Hoxd3_MA0912.1	5	1	-	8.091808275369889	8.627845318482375	CTGACATAATTGACCC
chr21	14277204	14277205	chr21:14277205:A:T	rs4816275	A	T	T	Hoxd3_MA0912.1	1	1	-	8.091808275369889	6.865572061207949	CTGACATAATTGACCC
chr21	14308497	14308498	chr21:14308498:G:A	rs1153322	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr21	14412899	14412900	chr21:14412900:A:G	rs9982509	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr21	14700814	14700815	chr21:14700815:C:T	rs11088131	C	T	C	Hoxd3_MA0912.1	4	1	-	10.877488549629053	10.273251821116679	TAGGGCTAATTAATCT
chr21	14772330	14772331	chr21:14772331:T:C	rs13046559	T	C	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr21	15355296	15355297	chr21:15355297:A:G	rs73177157	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr21	15422259	15422260	chr21:15422260:A:T	rs2242829	A	T	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr21	15440232	15440233	chr21:15440233:C:A	rs1736020	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr21	15689065	15689066	chr21:15689066:C:T	rs114613198	C	T	C	Hoxd3_MA0912.1	3	1	+	8.56705236748608	9.303733590065752	TTGCGGTAATGAAATT
chr21	15689084	15689085	chr21:15689085:A:G	rs2242675	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr21	16246746	16246747	chr21:16246747:C:A	rs556317351	C	A	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr21	16286346	16286347	chr21:16286347:T:C	rs239051	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr21	16536925	16536926	chr21:16536926:T:C	rs113966322	T	C	T	Hoxd3_MA0912.1	15	1	+	9.670082102537807	8.892377533949798	CTGGCTTAATTAATAT
chr21	16624668	16624669	chr21:16624669:A:T	rs79910324	A	T	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr21	16770730	16770731	chr21:16770731:A:G	rs2824037	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr21	17459162	17459163	chr21:17459163:T:C	rs13047367	T	C	C	Hoxd3_MA0912.1	15	1	+	8.844547597202176	8.066843028614167	TAGGTTTAATTGACTT
chr21	17511975	17511976	chr21:17511976:T:C	chr21:17511976:T:C	T	C	T	Hoxd3_MA0912.1	8	1	-	9.212712619350873	2.32414015978551	TAGTTTTAATTAGCTT
chr21	17670976	17670977	chr21:17670977:G:A	rs8134716	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr21	17671916	17671917	chr21:17671917:G:A	rs2824434	G	A	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr21	17703451	17703452	chr21:17703452:T:C	rs7282053	T	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr21	17703456	17703457	chr21:17703457:C:G	rs7277655	C	G	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr21	18179310	18179311	chr21:18179311:C:A	rs2824685	C	A	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr21	18269380	18269381	chr21:18269381:C:T	rs9979816	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr21	18493656	18493657	chr21:18493657:T:C	rs553722010	T	C	T	Hoxd3_MA0912.1	13	1	+	7.66223850381345	8.266475232325822	CTGCTGTAATTGATGG
chr21	18493662	18493663	chr21:18493663:C:T	chr21:18493663:C:T	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr21	18922213	18922214	chr21:18922214:T:G	rs148606953	T	G	T	Hoxd3_MA0912.1	6	1	+	9.220222851370517	2.4755866819581893	TACAGGTAATTAATGT
chr21	18922237	18922238	chr21:18922238:A:G	rs438280	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr21	19049754	19049755	chr21:19049755:G:A	rs9653750	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr21	19049764	19049765	chr21:19049765:G:A	rs9978849	G	A	G	Hoxd3_MA0912.1	13	1	-	7.479627998883124	6.875391270370749	CTGAGCTCATGACCTC
chr21	19175941	19175942	chr21:19175942:C:T	rs2825399	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr21	19175942	19175943	chr21:19175943:G:A	rs8133378	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr21	19386744	19386745	chr21:19386745:T:C	rs11910540	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr21	19519365	19519366	chr21:19519366:A:C	rs2017498	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr21	19608482	19608483	chr21:19608483:C:T	rs536441607	C	T	c	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr21	19791178	19791179	chr21:19791179:G:C	rs9976736	G	C	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr21	19850298	19850299	chr21:19850299:T:C	rs73321895	T	C	T	Hoxd3_MA0912.1	3	1	-	8.42666445522889	8.312566704189868	TAGAGGTAATTGGTCT
chr21	20390605	20390606	chr21:20390606:T:C	rs2826223	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr21	20443635	20443636	chr21:20443636:C:G	rs57698868	C	G	C	Hoxd3_MA0912.1	6	1	+	8.1098208897819	3.1511106685505648	GTGAGTCAATTATCCT
chr21	20443655	20443656	chr21:20443656:C:T	rs13052452	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr21	20471299	20471300	chr21:20471300:C:T	rs1735813	C	T	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr21	20739388	20739389	chr21:20739389:A:G	rs7283057	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr21	20999270	20999271	chr21:20999271:T:A	rs7510552	T	A	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr21	21093356	21093357	chr21:21093357:G:A	rs57614206	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr21	21365212	21365213	chr21:21365213:G:T	rs232504	G	T	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr21	21664527	21664528	chr21:21664528:G:A	rs139456004	G	A	G	Hoxd3_MA0912.1	14	1	+	9.554576159285517	8.610610829521384	CTGATTTCATTAACGC
chr21	23156773	23156774	chr21:23156774:C:T	rs1857853	C	T	C	Hoxd3_MA0912.1	6	1	+	8.771687383396875	10.557613331577869	CTTGGCCAATTACAGT
chr21	23472068	23472069	chr21:23472069:A:C	rs12483738	A	C	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr21	23494243	23494244	chr21:23494244:C:T	rs13049330	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr21	24118799	24118800	chr21:24118800:T:C	rs1783349	T	C	c	Hoxd3_MA0912.1	2	1	-	8.779419058933165	10.229254103090204	AAAGGATAATTAACCT
chr21	24670069	24670070	chr21:24670070:T:C	rs8126562	T	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr21	24939687	24939688	chr21:24939688:A:G	rs982885	A	G	A	Hoxd3_MA0912.1	3	1	+	9.789707522023612	9.675609770984588	TTTATTTAATTAAACG
chr21	25461871	25461872	chr21:25461872:A:G	rs2829761	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr21	25736590	25736591	chr21:25736591:A:G	chr21:25736591:A:G	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr21	25998318	25998319	chr21:25998319:T:C	rs139128431	T	C	T	Hoxd3_MA0912.1	9	1	+	8.017204304308398	1.1286318447430357	CTGACCTAATTGACTG
chr21	26000377	26000378	chr21:26000378:G:C	rs28635874	G	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr21	26061029	26061030	chr21:26061030:C:T	rs554738941	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr21	26110864	26110865	chr21:26110865:A:G	rs45444493	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr21	26126272	26126273	chr21:26126273:T:G	rs2830069	T	G	T	Hoxd3_MA0912.1	10	1	+	9.001255352972498	7.027312986791978	TTTAGGTAATTAGAAT
chr21	26294064	26294065	chr21:26294065:C:G	rs80170353	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr21	26321227	26321228	chr21:26321228:C:T	rs1888428	C	T	T	Hoxd3_MA0912.1	0	1	+	9.96135975543662	10.01386525281455	CTCAGTTAATTAACTC
chr21	26850772	26850773	chr21:26850773:T:C	rs229100	T	C	C	Hoxd3_MA0912.1	15	1	+	8.01624838731358	7.238543818725572	CTTGGGCAATTACAAT
chr21	26968369	26968370	chr21:26968370:A:G	chr21:26968370:A:G	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr21	27022611	27022612	chr21:27022612:G:A	rs233610	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr21	27077629	27077630	chr21:27077630:T:C	rs77075049	T	C	T	Hoxd3_MA0912.1	1	1	+	7.503031696991868	5.418971209455738	CTAAGCCAATTATCCG
chr21	27423055	27423056	chr21:27423056:T:C	rs239649	T	C	T	Hoxd3_MA0912.1	0	1	+	8.645433070899212	8.592927573521283	TTGCTTTAATTATTCC
chr21	27456532	27456533	chr21:27456533:C:T	rs2212829	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr21	27570528	27570529	chr21:27570529:C:A	rs148111476	C	A	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr21	27666978	27666979	chr21:27666979:A:T	rs1155159	A	T	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr21	28152818	28152819	chr21:28152819:C:A	rs8127727	C	A	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr21	28632781	28632782	chr21:28632782:G:C	rs139692530	G	C	G	Hoxd3_MA0912.1	10	1	+	8.750274213814304	3.9445333373643963	TTTAGCTAATGACAGT
chr21	28829383	28829384	chr21:28829384:T:C	rs4816332	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr21	28940738	28940739	chr21:28940739:G:T	rs2243503	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr21	29003201	29003202	chr21:29003202:T:G	rs1028261126	T	G	t	Hoxd3_MA0912.1	29	0	+	0	0	.
chr21	29384264	29384265	chr21:29384265:C:T	rs2832307	C	T	T	Hoxd3_MA0912.1	11	1	-	7.687114223539174	9.473040171720168	CTGGACTCATTGCTCT
chr21	29482241	29482242	chr21:29482242:C:T	rs1557277	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr21	29830210	29830211	chr21:29830211:A:G	rs458447	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr21	30710612	30710613	chr21:30710613:A:C	rs9979480	A	C	N	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr21	30954950	30954951	chr21:30954951:C:T	rs8134527	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr21	31059432	31059433	chr21:31059433:T:C	rs28404183	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr21	31140861	31140862	chr21:31140862:C:T	rs68079655	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr21	31278917	31278918	chr21:31278918:T:C	rs117163671	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr21	31433057	31433058	chr21:31433058:T:A	rs2284511	T	A	A	Hoxd3_MA0912.1	9	1	+	8.08214408801705	3.5914669012500577	TTGAAGTAATGGCCTT
chr21	31444608	31444609	chr21:31444609:T:C	rs553833	T	C	T	Hoxd3_MA0912.1	12	1	+	8.900077514729922	10.106829434734786	CTGGACTAATTATCAG
chr21	31660674	31660675	chr21:31660675:C:A	rs6650814	C	A	.	Hoxd3_MA0912.1	15	1	-	8.224654804248761	9.048663940878455	TTGATGTAATTGGTCG
chr21	31660687	31660688	chr21:31660688:C:G	rs4816405	C	G	.	Hoxd3_MA0912.1	2	1	-	8.224654804248761	6.441180386554813	TTGATGTAATTGGTCG
chr21	31778181	31778182	chr21:31778182:C:T	rs13047928	C	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr21	31781157	31781158	chr21:31781158:G:A	rs1237513520	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr21	32596889	32596890	chr21:32596890:A:G	rs1782986	A	G	G	Hoxd3_MA0912.1	7	1	+	7.876852178558584	1.0971689359281573	CTGGGCCAATTGTCCT
chr21	32808327	32808328	chr21:32808328:T:C	rs8128188	T	C	T	Hoxd3_MA0912.1	1	1	+	9.080121386287178	6.996060898751047	CTATTTTAATTACCTG
chr21	32906892	32906893	chr21:32906893:A:T	rs12627339	A	T	T	Hoxd3_MA0912.1	3	1	-	7.89126123541854	8.455597681550831	AGGTGGTAATTAAGGT
chr21	33036821	33036822	chr21:33036822:T:G	rs76945165	T	G	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr21	33059983	33059984	chr21:33059984:C:T	rs2834080	C	T	C	Hoxd3_MA0912.1	15	1	+	8.031406968571355	8.809111537159364	ATGGTCTCATTACTCC
chr21	33185926	33185927	chr21:33185927:A:G	rs1475837	A	G	A	Hoxd3_MA0912.1	8	1	+	7.989373974244931	1.1008015146795689	CTGGGCTAATGAGTAT
chr21	33364639	33364640	chr21:33364640:C:A	rs9978280	C	A	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr21	33364645	33364646	chr21:33364646:T:C	rs9978964	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr21	33461578	33461579	chr21:33461579:T:G	rs4817572	T	G	G	Hoxd3_MA0912.1	11	1	-	7.643452914243317	0.8988167448309885	CTCAGGCAATTAGCCC
chr21	34030594	34030595	chr21:34030595:A:G	rs2834352	A	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr21	34030614	34030615	chr21:34030615:A:T	rs2834353	A	T	A	Hoxd3_MA0912.1	13	1	+	9.91673573791472	9.91673573791472	TTAATTTAATTACATT
chr21	34361923	34361924	chr21:34361924:G:A	rs183575713	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr21	34534556	34534557	chr21:34534557:G:A	chr21:34534557:G:A	G	A	G	Hoxd3_MA0912.1	7	1	-	7.968046336978025	3.162305460528118	TTGGTGTCATTGACTT
chr21	34534569	34534570	chr21:34534570:G:A	rs2834505	G	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr21	34545802	34545803	chr21:34545803:T:C	rs73208707	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr21	34545832	34545833	chr21:34545833:C:G	rs571320417	C	G	C	Hoxd3_MA0912.1	3	1	-	9.059051313908517	7.8721313962355755	CTGGGGTCATTATTCT
chr21	34745353	34745354	chr21:34745354:T:C	rs56043149	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr21	34795483	34795484	chr21:34795484:A:C	rs117462132	A	C	A	Hoxd3_MA0912.1	11	1	+	10.951191771686535	4.206555602274207	CAGAGGTAATTAAAGT
chr21	34795491	34795492	chr21:34795492:T:A	rs189001829	T	A	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr21	35113123	35113124	chr21:35113124:C:T	rs114785204	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr21	35128789	35128790	chr21:35128790:G:T	rs78378607	G	T	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr21	35229558	35229559	chr21:35229559:C:T	rs76498878	C	T	C	Hoxd3_MA0912.1	6	1	+	8.486247640443144	10.272173588624137	CTGCTGCAATTACTGT
chr21	35303406	35303407	chr21:35303407:T:C	rs113670516	T	C	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr21	35521801	35521802	chr21:35521802:G:A	rs28648897	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr21	35525027	35525028	chr21:35525028:C:T	rs387224	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr21	35932860	35932861	chr21:35932861:G:A	rs35226007	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr21	35995468	35995469	chr21:35995469:C:T	rs35177343	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr21	36552497	36552498	chr21:36552498:G:A	rs142909313	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr21	36587921	36587922	chr21:36587922:C:A	rs75305697	C	A	C	Hoxd3_MA0912.1	2	1	-	7.950011091012125	6.63282052146138	CTGTGATAATGAGCCC
chr21	36701952	36701953	chr21:36701953:C:T	rs2269191	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr21	37435323	37435324	chr21:37435324:T:C	chr21:37435324:T:C	T	C	T	Hoxd3_MA0912.1	10	1	+	8.963850888106405	2.184167645475977	CTATGCTAATTAGCCG
chr21	37594406	37594407	chr21:37594407:G:A	rs112841326	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr21	38126925	38126926	chr21:38126926:T:C	rs112850723	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr21	38374414	38374415	chr21:38374415:T:C	rs62217877	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr21	38839962	38839963	chr21:38839963:C:G	rs12483746	C	G	C	Hoxd3_MA0912.1	6	1	+	8.118533416464608	3.159823195233271	CTGATTCCATTACTCT
chr21	38839974	38839975	chr21:38839975:G:A	rs73903621	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr21	38839978	38839979	chr21:38839979:G:A	rs12481740	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr21	38859941	38859942	chr21:38859942:G:A	rs7281192	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr21	38979853	38979854	chr21:38979854:G:A	rs2836803	G	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr21	38979901	38979902	chr21:38979902:C:T	rs9982548	C	T	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr21	39023416	39023417	chr21:39023417:C:T	rs2836845	C	T	C	Hoxd3_MA0912.1	1	1	-	7.346014552301682	8.203838825675874	CGGCCTTAATTAACCC
chr21	39466515	39466516	chr21:39466516:A:G	rs71316677	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr21	39632401	39632402	chr21:39632402:C:A	rs80289816	C	A	C	Hoxd3_MA0912.1	5	1	-	8.932599116677462	9.061394224883031	ATCACGTAATTAACCT
chr21	39738354	39738355	chr21:39738355:A:G	rs4816642	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr21	39754803	39754804	chr21:39754804:G:A	rs2837157	G	A	G	Hoxd3_MA0912.1	3	1	-	8.735960933240797	9.47264215582047	CTGCTTTAATTAAAGA
chr21	40078298	40078299	chr21:40078299:A:C	rs393819	A	C	A	Hoxd3_MA0912.1	1	1	-	7.56092118283715	5.476860695301021	TTGCACTCATTACACC
chr21	40534304	40534305	chr21:40534305:T:G	rs2837685	T	G	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr21	41063599	41063600	chr21:41063600:G:A	rs2837918	G	A	G	Hoxd3_MA0912.1	2	1	+	8.32350512036412	6.87367007620708	CCGTAGTAATTACACC
chr21	41086763	41086764	chr21:41086764:G:A	rs75130225	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr21	41147714	41147715	chr21:41147715:G:C	rs73362455	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr21	41147760	41147761	chr21:41147761:G:A	rs73362457	G	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr21	41159797	41159798	chr21:41159798:C:T	rs77270082	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr21	41159831	41159832	chr21:41159832:A:T	rs2150425	A	T	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr21	41170276	41170277	chr21:41170277:T:A	rs2252503	T	A	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr21	41227290	41227291	chr21:41227291:T:A	rs17000688	T	A	A	Hoxd3_MA0912.1	15	1	+	7.498768049466127	5.833760285877216	TTAGGGTCATGAACCT
chr21	41240952	41240953	chr21:41240953:G:A	rs73366468	G	A	g	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr21	41250487	41250488	chr21:41250488:T:C	rs73902980	T	C	T	Hoxd3_MA0912.1	0	1	+	9.641240266121159	9.588734768743228	TTGAAGTAATTATTGC
chr21	41432991	41432992	chr21:41432992:G:A	rs17000906	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr21	41671614	41671615	chr21:41671615:G:A	rs9647274	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr21	41702166	41702167	chr21:41702167:G:A	rs6586225	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr21	41713553	41713554	chr21:41713554:G:T	rs2838095	G	T	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr21	41800017	41800018	chr21:41800018:T:C	rs2236691	T	C	T	Hoxd3_MA0912.1	0	1	+	8.32596900125644	8.27346350387851	TAGGGGCAATTAATGC
chr21	41885482	41885483	chr21:41885483:T:G	rs1045071	T	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr21	42021205	42021206	chr21:42021206:G:A	rs11701203	G	A	G	Hoxd3_MA0912.1	15	1	-	8.944883031327729	9.722587599915737	TTGGCTTAATTAAAAC
chr21	42048257	42048258	chr21:42048258:T:G	rs2839456	T	G	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr21	42048375	42048376	chr21:42048376:A:C	rs996738332	A	C	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr21	42134460	42134461	chr21:42134461:A:G	rs220168	A	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr21	42134621	42134622	chr21:42134622:T:A	rs12483133	T	A	T	Hoxd3_MA0912.1	15	1	+	9.937182809094653	8.272175045505742	ATTAGTTAATTAATTT
chr21	42193555	42193556	chr21:42193556:G:A	rs74944931	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr21	42199304	42199305	chr21:42199305:G:A	rs4148082	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr21	42320577	42320578	chr21:42320578:G:A	rs480289	G	A	g	Hoxd3_MA0912.1	1	1	+	9.101209688952128	9.959033962326318	CGGTTGTAATTAAACT
chr21	42338056	42338057	chr21:42338057:C:G	rs111341491	C	G	c	Hoxd3_MA0912.1	29	0	-	0	0	.
chr21	42338063	42338064	chr21:42338064:G:A	rs115304973	G	A	g	Hoxd3_MA0912.1	22	0	-	0	0	.
chr21	42338089	42338090	chr21:42338090:G:A	rs148799907	G	A	g	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr21	42440130	42440131	chr21:42440131:A:C	rs183410914	A	C	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr21	42591914	42591915	chr21:42591915:G:C	rs8127355	G	C	G	Hoxd3_MA0912.1	5	1	+	8.98519278012561	8.796666446444773	CAGAAGTAATTAAGTT
chr21	42600271	42600272	chr21:42600272:T:C	rs58221394	T	C	t	Hoxd3_MA0912.1	30	0	-	0	0	.
chr21	42600312	42600313	chr21:42600313:A:G	rs433632	A	G	a	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr21	42626899	42626900	chr21:42626900:C:T	rs434914	C	T	c	Hoxd3_MA0912.1	32	0	+	0	0	.
chr21	42645595	42645596	chr21:42645596:G:A	rs181646040	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr21	42799710	42799711	chr21:42799711:C:T	rs568851841	C	T	C	Hoxd3_MA0912.1	14	1	-	8.54880631017958	7.604840980415446	CTCATTTCATTACCGT
chr21	42799743	42799744	chr21:42799744:C:T	rs745881252	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr21	42821299	42821300	chr21:42821300:T:C	rs77017543	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr21	42893222	42893223	chr21:42893223:T:C	chr21:42893223:T:C	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr21	42893266	42893267	chr21:42893267:C:T	rs1001689096	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr21	43341805	43341806	chr21:43341806:T:C	rs955488437	T	C	.	Hoxd3_MA0912.1	9	1	+	6.665928586298322	-0.22264387326704127	CTGTGGTCATTGGCGG
chr21	43352109	43352110	chr21:43352110:A:G	rs2838279	A	G	.	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr21	43365191	43365192	chr21:43365192:G:A	rs114200315	G	A	.	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr21	43850900	43850901	chr21:43850901:C:G	rs58859690	C	G	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr21	43952338	43952339	chr21:43952339:A:G	rs9982600	A	G	A	Hoxd3_MA0912.1	11	1	+	9.330815636561853	7.544889688380861	TTAACTTAATTACTGT
chr21	44361760	44361761	chr21:44361761:A:G	rs4818715	A	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr21	44479974	44479975	chr21:44479975:C:A	rs60036065	C	A	C	Hoxd3_MA0912.1	2	1	-	8.887513279552904	7.570322710002159	TTGTAGCAATTACTTT
chr21	44525267	44525268	chr21:44525268:A:G	rs77505020	A	G	-	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr21	44672950	44672951	chr21:44672951:T:C	rs13047821	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr21	44704140	44704141	chr21:44704141:A:G	rs2250930	A	G	G	Hoxd3_MA0912.1	1	1	-	7.236552210511578	5.152491722975445	CTGTTCTAATTGCGGG
chr21	44723624	44723625	chr21:44723625:G:A	rs1331210452	G	A	g	Hoxd3_MA0912.1	18	0	-	0	0	.
chr21	44723625	44723626	chr21:44723626:G:A	chr21:44723626:G:A	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr21	44753075	44753076	chr21:44753076:A:C	chr21:44753076:A:C	A	C	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr21	44753112	44753113	chr21:44753113:C:T	rs664353	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr21	44792664	44792665	chr21:44792665:G:A	rs9978131	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr21	44874637	44874638	chr21:44874638:T:G	rs558461125	T	G	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr21	44874638	44874639	chr21:44874639:T:C	rs576878738	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr21	44874652	44874653	chr21:44874653:C:G	rs7279563	C	G	C	Hoxd3_MA0912.1	13	1	+	7.821799885939084	6.243721975226	CTTAGTTCATGACCCT
chr21	44936900	44936901	chr21:44936901:A:G	rs4818989	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr21	45026062	45026063	chr21:45026063:G:A	rs79680854	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr21	45128928	45128929	chr21:45128929:A:T	rs187723201	A	T	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr21	45427859	45427860	chr21:45427860:T:G	rs1005684518	T	G	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr21	45427901	45427902	chr21:45427902:C:T	rs74959733	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr21	45429645	45429646	chr21:45429646:A:G	rs2838929	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr21	45508608	45508609	chr21:45508609:A:C	rs79939968	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr21	45597052	45597053	chr21:45597053:A:G	rs13050787	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr21	45792787	45792788	chr21:45792788:G:A	rs76282262	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr21	45827932	45827933	chr21:45827933:T:C	rs58126571	T	C	C	Hoxd3_MA0912.1	3	1	+	8.210903308393595	7.474222085813923	CTGTAGTAATGAAAGG
chr21	45955353	45955354	chr21:45955354:A:G	rs2507743	A	G	G	Hoxd3_MA0912.1	8	1	+	8.651498009388943	1.7629255498235805	CAGACATAATTAACCC
chr21	46162878	46162879	chr21:46162879:A:G	rs115654656	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr21	46169221	46169222	chr21:46169222:T:C	rs4819211	T	C	C	Hoxd3_MA0912.1	10	1	+	7.073141289138997	0.2934580465085676	CAGCTGTAATTGGCCT
chr21	46169241	46169242	chr21:46169242:T:C	rs9980792	T	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr21	46191370	46191371	chr21:46191371:T:C	rs73144744	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr21	46253861	46253862	chr21:46253862:T:C	chr21:46253862:T:C	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr21	46374898	46374899	chr21:46374899:C:T	rs2839233	C	T	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr21	46426021	46426022	chr21:46426022:T:C	rs2330435	T	C	C	Hoxd3_MA0912.1	3	1	+	7.732260882656968	6.995579660077295	TTGTGGTAATGGCCGC
chr21	46426027	46426028	chr21:46426028:T:C	rs2330436	T	C	C	Hoxd3_MA0912.1	9	1	+	7.732260882656968	0.8436884230916062	TTGTGGTAATGGCCGC
chr21	46617335	46617336	chr21:46617336:A:T	rs9980187	A	T	A	Hoxd3_MA0912.1	3	1	+	9.872432081545014	9.308095635412723	ATGATTTAATTACTTC
chr22	10782584	10782585	chr22:10782585:A:G	rs1250552344	A	G	.	Hoxd3_MA0912.1	21	0	-	0	0	.
chr22	11035056	11035057	chr22:11035057:C:G	rs879107383	C	G	.	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr22	11036978	11036979	chr22:11036979:A:G	rs1308964339	A	G	.	Hoxd3_MA0912.1	2	1	-	8.28417411412052	7.817890265977315	ATTGGCCAATTACACT
chr22	11605121	11605122	chr22:11605122:C:T	rs71238200	C	T	.	Hoxd3_MA0912.1	7	1	+	6.507876534357601	1.7021356579076925	CTCGGCTCATTGCTCT
chr22	15775350	15775351	chr22:15775351:G:A	rs868667906	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr22	17081022	17081023	chr22:17081023:A:C	rs4819956	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr22	17322702	17322703	chr22:17322703:A:G	rs5994258	A	G	g	Hoxd3_MA0912.1	6	1	-	9.12935789569633	7.343431947515339	TTGGTCTCATTACCGG
chr22	17406874	17406875	chr22:17406875:C:G	rs112040018	C	G	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr22	17418560	17418561	chr22:17418561:T:C	rs16982402	T	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr22	17477716	17477717	chr22:17477717:G:C	rs4819593	G	C	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr22	17776470	17776471	chr22:17776471:T:C	rs12627897	T	C	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr22	17923923	17923924	chr22:17923924:C:T	rs2401411	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr22	17966776	17966777	chr22:17966777:A:G	rs11704059	A	G	A	Hoxd3_MA0912.1	0	1	-	9.412540979616244	9.360035482238315	TTGAAATAATTACTCA
chr22	18023306	18023307	chr22:18023307:A:G	rs9605497	A	G	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr22	19086098	19086099	chr22:19086099:G:A	rs5993516	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr22	19106651	19106652	chr22:19106652:C:T	rs2189490	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr22	19194044	19194045	chr22:19194045:C:T	rs9605955	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	19280500	19280501	chr22:19280501:A:G	rs361639	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr22	19294235	19294236	chr22:19294236:T:C	rs13057255	T	C	T	Hoxd3_MA0912.1	6	1	+	6.7283315349436705	4.942405586762677	CTGGGGTCATTGAGCC
chr22	19460234	19460235	chr22:19460235:G:A	rs5748215	G	A	A	Hoxd3_MA0912.1	2	1	+	9.944359647025683	8.494524602868644	CTGTGTTAATGACACT
chr22	19518823	19518824	chr22:19518824:T:G	rs751827317	T	G	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	19600552	19600553	chr22:19600553:T:C	rs5748335	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr22	19630394	19630395	chr22:19630395:G:A	rs73162680	G	A	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr22	19640423	19640424	chr22:19640424:C:T	rs58544504	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr22	19824196	19824197	chr22:19824197:C:T	rs9606166	C	T	C	Hoxd3_MA0912.1	12	1	-	9.17281233697079	10.14033456790982	TAGAATTAATTAGTTT
chr22	19928415	19928416	chr22:19928416:G:A	rs7290448	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr22	19948083	19948084	chr22:19948084:G:T	rs174682	G	T	G	Hoxd3_MA0912.1	12	1	-	9.451849725685195	9.451849725685195	TTGTAGCAATTACTCT
chr22	20177065	20177066	chr22:20177066:G:A	rs385773	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr22	20200399	20200400	chr22:20200400:A:G	rs73394008	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr22	20245308	20245309	chr22:20245309:C:T	rs375442457	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr22	20396828	20396829	chr22:20396829:C:A	rs191328713	C	A	c	Hoxd3_MA0912.1	2	1	-	9.151635904259308	7.834445334708564	ATGTGGTAATGACACT
chr22	20396845	20396846	chr22:20396846:A:G	rs361877	A	G	a	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr22	20926174	20926175	chr22:20926175:G:C	rs3827296	G	C	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr22	21017870	21017871	chr22:21017871:G:T	rs2073597	G	T	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr22	21652150	21652151	chr22:21652151:T:C	rs3804071	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	21754548	21754549	chr22:21754549:G:A	rs763370647	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr22	22040344	22040345	chr22:22040345:C:T	rs368014	C	T	c	Hoxd3_MA0912.1	12	1	+	9.413670082683558	8.206918162678694	CTGAGCTCATTACTCC
chr22	22040350	22040351	chr22:22040351:C:T	rs1372070	C	T	t	Hoxd3_MA0912.1	18	0	+	0	0	.
chr22	22076399	22076400	chr22:22076400:A:G	rs5756765	A	G	a	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr22	22086087	22086088	chr22:22086088:C:T	rs1894251	C	T	c	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr22	22126813	22126814	chr22:22126814:G:A	rs77913924	G	A	.	Hoxd3_MA0912.1	12	1	-	8.432791509026599	7.226039589021735	ATGGACCAATTACTTT
chr22	22573665	22573666	chr22:22573666:C:T	rs2330191	C	T	g	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr22	22574129	22574130	chr22:22574130:C:T	rs5996191	C	T	c	Hoxd3_MA0912.1	30	0	-	0	0	.
chr22	22684907	22684908	chr22:22684908:G:A	rs72495410	G	A	.	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr22	22702475	22702476	chr22:22702476:C:A	rs149456536	C	A	.	Hoxd3_MA0912.1	3	1	-	9.07680872751527	8.626570032422004	CAGGTCTAATTAGAGT
chr22	22775043	22775044	chr22:22775044:G:A	rs5759467	G	A	.	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr22	22811277	22811278	chr22:22811278:C:T	rs138508749	C	T	.	Hoxd3_MA0912.1	25	0	+	0	0	.
chr22	23053232	23053233	chr22:23053233:C:A	rs9620213	C	A	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr22	23315289	23315290	chr22:23315290:A:G	rs180810	A	G	N	Hoxd3_MA0912.1	28	0	-	0	0	.
chr22	23315307	23315308	chr22:23315308:C:G	rs180811	C	G	c	Hoxd3_MA0912.1	10	1	-	7.514156299144853	2.708415422694945	CTGGTGTCATGAACCC
chr22	23516394	23516395	chr22:23516395:C:T	rs2330513	C	T	c	Hoxd3_MA0912.1	2	1	-	8.299834945817613	6.849999901660576	CTGTTATAATTATTGC
chr22	23516586	23516587	chr22:23516587:T:C	rs73397378	T	C	N	Hoxd3_MA0912.1	10	1	+	6.875046647125998	0.09536340449556985	CTGGGTCAATTGGAGC
chr22	23540993	23540994	chr22:23540994:C:T	rs73878934	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr22	23660936	23660937	chr22:23660937:T:A	rs131436	T	A	.	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr22	23684052	23684053	chr22:23684053:G:A	rs112637369	G	A	.	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr22	23814366	23814367	chr22:23814367:G:A	rs35381470	G	A	G	Hoxd3_MA0912.1	12	1	+	7.21705292887259	8.18457515981162	CTGGAGCAATTAGACA
chr22	24087663	24087664	chr22:24087664:G:A	rs764501745	G	A	G	Hoxd3_MA0912.1	13	1	-	7.433353528980096	6.829116800467721	CTGCTTCAATTGACGT
chr22	24118163	24118164	chr22:24118164:G:A	rs115739479	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr22	24200992	24200993	chr22:24200993:T:C	rs77160455	T	C	t	Hoxd3_MA0912.1	34	0	+	0	0	.
chr22	24271509	24271510	chr22:24271510:C:T	rs181246888	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr22	24271510	24271511	chr22:24271511:T:G	chr22:24271511:T:G	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr22	24271513	24271514	chr22:24271514:T:C	chr22:24271514:T:C	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr22	24896751	24896752	chr22:24896752:C:G	rs139730	C	G	G	Hoxd3_MA0912.1	11	1	-	7.414737347589837	2.456027126358501	CTCAGGTCATTGACCT
chr22	25202468	25202469	chr22:25202469:C:G	rs747588930	C	G	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr22	25202483	25202484	chr22:25202484:T:G	rs148374073	T	G	T	Hoxd3_MA0912.1	4	1	+	7.563204355632658	8.167441084145032	TTGGTCTCATTGAAGT
chr22	25202488	25202489	chr22:25202489:T:C	rs571220281	T	C	T	Hoxd3_MA0912.1	9	1	+	7.563204355632658	0.6746318960672959	TTGGTCTCATTGAAGT
chr22	25514911	25514912	chr22:25514912:C:T	rs487272	C	T	T	Hoxd3_MA0912.1	0	1	+	7.31750976985084	7.370015267228771	CTGGGCTCATTGAGCT
chr22	25569793	25569794	chr22:25569794:T:C	rs6004701	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr22	25630777	25630778	chr22:25630778:A:C	rs138164748	A	C	A	Hoxd3_MA0912.1	9	1	-	9.314044433715914	4.823367246948922	CTAGATTAATTAATGG
chr22	25702260	25702261	chr22:25702261:A:G	rs16980593	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr22	25840978	25840979	chr22:25840979:G:T	rs73169000	G	T	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr22	26067057	26067058	chr22:26067058:G:A	rs5761367	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr22	26067060	26067061	chr22:26067061:C:A	rs5997036	C	A	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr22	26246712	26246713	chr22:26246713:G:A	rs717191	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr22	26314805	26314806	chr22:26314806:C:T	rs6005011	C	T	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr22	26643180	26643181	chr22:26643181:G:C	rs77229052	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr22	26768998	26768999	chr22:26768999:C:T	rs3091366	C	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr22	26845600	26845601	chr22:26845601:G:A	rs190379346	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	26845602	26845603	chr22:26845603:A:G	chr22:26845603:A:G	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr22	26853920	26853921	chr22:26853921:T:C	rs6005206	T	C	T	Hoxd3_MA0912.1	8	1	-	7.708543071855136	0.8199706122897732	CTGCAGCAATTACAGC
chr22	26952932	26952933	chr22:26952933:A:G	rs2331359	A	G	G	Hoxd3_MA0912.1	15	1	+	7.389034629339584	8.2300332562988	AGGAGCTAATTAGCCA
chr22	26977970	26977971	chr22:26977971:G:T	rs5752459	G	T	.	Hoxd3_MA0912.1	4	1	+	9.998366897914051	9.394130169401677	CAGGGTTAATTAGTGT
chr22	27107742	27107743	chr22:27107743:C:T	rs115754088	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr22	27138605	27138606	chr22:27138606:A:G	rs187063250	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr22	27175212	27175213	chr22:27175213:G:A	rs527647716	G	A	G	Hoxd3_MA0912.1	1	1	+	8.578813196114945	9.436637469489137	CGGGGCTAATTAATTG
chr22	27175382	27175383	chr22:27175383:C:T	rs16983862	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr22	27202979	27202980	chr22:27202980:C:A	rs146648529	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr22	27202992	27202993	chr22:27202993:C:G	rs181380087	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr22	27202995	27202996	chr22:27202996:C:T	rs75426399	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	27203025	27203026	chr22:27203026:G:T	rs767204194	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr22	27370644	27370645	chr22:27370645:C:T	rs62224025	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr22	27527608	27527609	chr22:27527609:T:C	rs953825875	T	C	T	Hoxd3_MA0912.1	1	1	-	9.402989713410028	8.545165440035836	CAGAAGTAATTACTAT
chr22	27733131	27733132	chr22:27733132:G:A	rs9620727	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr22	27844882	27844883	chr22:27844883:G:A	rs80315609	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr22	27887888	27887889	chr22:27887889:A:G	rs182477322	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr22	28499005	28499006	chr22:28499006:T:G	rs695442	T	G	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr22	28649941	28649942	chr22:28649942:T:C	rs60693420	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr22	28868694	28868695	chr22:28868695:G:T	rs149070105	G	T	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr22	29014243	29014244	chr22:29014244:A:C	rs4823003	A	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	29062452	29062453	chr22:29062453:A:G	rs134559	A	G	A	Hoxd3_MA0912.1	10	1	-	8.079706472193351	1.3000232295629244	CAGCTCTAATTACTGC
chr22	29209142	29209143	chr22:29209143:A:G	rs1262312863	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr22	29245288	29245289	chr22:29245289:A:G	rs5763092	A	G	G	Hoxd3_MA0912.1	11	1	+	9.60095972034188	7.815033772160888	CTAGGCTAATTACTGG
chr22	29276127	29276128	chr22:29276128:T:C	rs17454495	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr22	29979975	29979976	chr22:29979976:A:G	rs17713646	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr22	30116928	30116929	chr22:30116929:G:A	rs9620948	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr22	30831913	30831914	chr22:30831914:T:C	rs5753338	T	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr22	30831944	30831945	chr22:30831945:T:C	rs5753339	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr22	31251107	31251108	chr22:31251108:A:G	rs4820043	A	G	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr22	31680968	31680969	chr22:31680969:A:C	rs5998085	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr22	31680988	31680989	chr22:31680989:G:C	rs112267950	G	C	G	Hoxd3_MA0912.1	0	1	-	8.06902895733789	6.0846525274547805	CTGTGCCAATTGACTT
chr22	31954819	31954820	chr22:31954820:C:T	rs80213963	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr22	32138365	32138366	chr22:32138366:T:G	rs5998249	T	G	G	Hoxd3_MA0912.1	9	1	+	7.6802496318804945	3.189572445113503	TTGAACCCATTAACCC
chr22	32138383	32138384	chr22:32138384:G:A	rs8142970	G	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr22	32315208	32315209	chr22:32315209:C:T	rs5753960	C	T	t	Hoxd3_MA0912.1	2	1	-	6.84068775504414	5.390852710887101	CTGTGCTCATTGCTGG
chr22	32336369	32336370	chr22:32336370:G:A	rs5998423	G	A	g	Hoxd3_MA0912.1	17	0	+	0	0	.
chr22	32354331	32354332	chr22:32354332:T:C	rs5754005	T	C	t	Hoxd3_MA0912.1	2	1	-	7.679522851539292	9.12935789569633	TTAGGCTCATTACAGG
chr22	32354337	32354338	chr22:32354338:G:A	rs5998435	G	A	g	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr22	32354907	32354908	chr22:32354908:G:A	rs12168398	G	A	g	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr22	32366949	32366950	chr22:32366950:T:G	rs5998451	T	G	g	Hoxd3_MA0912.1	28	0	+	0	0	.
chr22	32645221	32645222	chr22:32645222:A:C	rs5749476	A	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr22	32649408	32649409	chr22:32649409:C:T	rs131068	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	32697411	32697412	chr22:32697412:A:G	rs1475979	A	G	A	Hoxd3_MA0912.1	13	1	+	9.080487039614436	8.106645857413728	CTGAGATAATTATATC
chr22	32762930	32762931	chr22:32762931:A:G	rs130525	A	G	A	Hoxd3_MA0912.1	1	1	-	8.035316095959521	5.95125560842339	CTAGAGTAATGAAAGT
chr22	32855045	32855046	chr22:32855046:G:A	rs2267183	G	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr22	32958405	32958406	chr22:32958406:T:C	chr22:32958406:T:C	T	C	T	Hoxd3_MA0912.1	5	1	-	10.132014938011263	10.856578314804588	CTGGGATAATTATTGT
chr22	32991774	32991775	chr22:32991775:C:T	rs5994650	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr22	33002914	33002915	chr22:33002915:C:A	rs5998689	C	A	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr22	33129668	33129669	chr22:33129669:A:G	rs137334	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	33300300	33300301	chr22:33300301:C:G	rs73166230	C	G	-	Hoxd3_MA0912.1	16	0	+	0	0	.
chr22	33472830	33472831	chr22:33472831:G:A	rs73409028	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr22	33472857	33472858	chr22:33472858:A:G	rs5994754	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr22	33825633	33825634	chr22:33825634:G:C	rs58634529	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr22	33848739	33848740	chr22:33848740:A:T	rs2267304	A	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr22	33854645	33854646	chr22:33854646:T:C	rs715502	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr22	34194944	34194945	chr22:34194945:G:A	rs12483983	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr22	34312658	34312659	chr22:34312659:C:T	rs16993879	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr22	34704705	34704706	chr22:34704706:C:T	rs737761	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr22	35111440	35111441	chr22:35111441:G:T	rs56170872	G	T	G	Hoxd3_MA0912.1	7	1	-	7.914353753261815	9.888296119442334	TTAGGGTCATTAATGC
chr22	35151010	35151011	chr22:35151011:G:A	rs9607234	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr22	35170844	35170845	chr22:35170845:C:T	rs8140804	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr22	35234692	35234693	chr22:35234693:T:A	rs4820182	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr22	35276518	35276519	chr22:35276519:G:A	rs2235149	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr22	35486731	35486732	chr22:35486732:C:T	rs28707161	C	T	C	Hoxd3_MA0912.1	14	1	+	9.013843458253138	8.449507012120847	AAAAGGTAATTAAACT
chr22	36176005	36176006	chr22:36176006:T:C	rs9610421	T	C	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr22	36248061	36248062	chr22:36248062:A:G	rs73165564	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr22	36265795	36265796	chr22:36265796:G:A	rs136177	G	A	a	Hoxd3_MA0912.1	14	1	-	10.221130502043316	9.656794055911025	CTGGGTTCATTAACCC
chr22	36380455	36380456	chr22:36380456:G:A	rs5995289	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr22	36397443	36397444	chr22:36397444:C:T	rs111304764	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr22	36588841	36588842	chr22:36588842:C:G	rs59382725	C	G	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	36972209	36972210	chr22:36972210:T:C	rs2858234	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr22	36972213	36972214	chr22:36972214:G:A	rs2858475	G	A	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr22	37170529	37170530	chr22:37170530:G:A	rs116696419	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr22	37174973	37174974	chr22:37174974:G:A	rs5756537	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr22	37362689	37362690	chr22:37362690:C:G	rs4821647	C	G	G	Hoxd3_MA0912.1	5	1	+	10.14138345032555	10.329909784006388	TTGGGCCAATTACTGT
chr22	37387310	37387311	chr22:37387311:G:A	rs17751502	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr22	37400991	37400992	chr22:37400992:G:A	rs62234979	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr22	37403466	37403467	chr22:37403467:G:T	rs73884041	G	T	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr22	37403497	37403498	chr22:37403498:A:G	rs6000716	A	G	G	Hoxd3_MA0912.1	0	1	-	8.10161994114088	8.04911444376295	TGGAATTAATTAGTCC
chr22	37482406	37482407	chr22:37482407:C:T	rs76917550	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr22	37496362	37496363	chr22:37496363:A:G	rs5756701	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr22	37568291	37568292	chr22:37568292:C:G	rs2281098	C	G	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr22	37607242	37607243	chr22:37607243:A:G	rs542320464	A	G	A	Hoxd3_MA0912.1	9	1	-	6.822746445756964	-0.06582601380839836	CTGGGTCCATTGCACT
chr22	37609358	37609359	chr22:37609359:A:T	rs186284993	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr22	37609384	37609385	chr22:37609385:G:T	rs911743167	G	T	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr22	37609869	37609870	chr22:37609870:C:T	rs7290615	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr22	38143428	38143429	chr22:38143429:A:C	rs117600608	A	C	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr22	38165299	38165300	chr22:38165300:C:T	rs132964	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr22	38273369	38273370	chr22:38273370:A:G	chr22:38273370:A:G	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr22	38417169	38417170	chr22:38417170:C:T	rs111105	C	T	T	Hoxd3_MA0912.1	12	1	+	9.730991524569966	8.524239604565102	CTGATTTCATTACCCC
chr22	38421099	38421100	chr22:38421100:C:T	rs138402	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr22	38832488	38832489	chr22:38832489:T:C	rs5757302	T	C	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr22	38906188	38906189	chr22:38906189:C:T	rs7287898	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr22	38927158	38927159	chr22:38927159:A:G	rs73159372	A	G	-	Hoxd3_MA0912.1	11	1	+	8.665185427202102	6.879259479021109	CAGTGGTAATTAAAAC
chr22	39289826	39289827	chr22:39289827:G:A	rs79290	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr22	39329274	39329275	chr22:39329275:C:T	rs5750789	C	T	c	Hoxd3_MA0912.1	17	0	-	0	0	.
chr22	39631515	39631516	chr22:39631516:G:A	rs5757754	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr22	39656111	39656112	chr22:39656112:C:G	rs12166249	C	G	C	Hoxd3_MA0912.1	0	1	+	8.68194727958525	6.697570849702143	CAGATGTAATTACAGA
chr22	39735117	39735118	chr22:39735118:G:A	rs115896816	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr22	39820603	39820604	chr22:39820604:C:T	rs58505471	C	T	T	Hoxd3_MA0912.1	5	1	-	9.802174335494573	9.07761095870125	CTTGAGTAATTAACAT
chr22	40009893	40009894	chr22:40009894:A:G	rs17406386	A	G	A	Hoxd3_MA0912.1	6	1	-	9.351147847952216	7.565221899771222	CAGCTTTAATTAAACT
chr22	40058064	40058065	chr22:40058065:T:G	rs7291691	T	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr22	40179326	40179327	chr22:40179327:T:G	rs918754445	T	G	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr22	40437003	40437004	chr22:40437004:G:T	chr22:40437004:G:T	G	T	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr22	40637086	40637087	chr22:40637087:G:T	rs187276699	G	T	.	Hoxd3_MA0912.1	24	0	-	0	0	.
chr22	40637097	40637098	chr22:40637098:A:T	rs371401230	A	T	.	Hoxd3_MA0912.1	13	1	-	8.960651182718085	8.960651182718085	ATGCAGTAATTACTCG
chr22	40751427	40751428	chr22:40751428:G:A	rs73172844	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr22	40767103	40767104	chr22:40767104:A:C	rs5758069	A	C	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr22	41174740	41174741	chr22:41174741:T:C	rs5758251	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr22	41191551	41191552	chr22:41191552:T:A	rs9607782	T	A	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr22	41303034	41303035	chr22:41303035:A:G	rs115924225	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr22	41380316	41380317	chr22:41380317:T:G	rs78348625	T	G	T	Hoxd3_MA0912.1	11	1	-	8.00727566409656	1.2626394946842312	CAGAAATAATTAGACG
chr22	41380334	41380335	chr22:41380335:C:G	rs560111123	C	G	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr22	41620124	41620125	chr22:41620125:A:G	rs28384698	A	G	A	Hoxd3_MA0912.1	1	1	-	8.682541020868172	6.59848053333204	CTAAGTTAATTGCTTT
chr22	41815784	41815785	chr22:41815785:C:G	rs8137282	C	G	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr22	41994220	41994221	chr22:41994221:C:G	rs7290655	C	G	c	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr22	42532917	42532918	chr22:42532918:A:G	rs56306647	A	G	-	Hoxd3_MA0912.1	8	1	+	9.451849725685195	2.5632772661198318	TTGTAGCAATTACTCT
chr22	42657469	42657470	chr22:42657470:G:C	rs117438035	G	C	G	Hoxd3_MA0912.1	12	1	+	7.512031736859024	8.479553967798054	CTGGGGCAATTAGGGG
chr22	43025273	43025274	chr22:43025274:G:A	rs73179017	G	A	G	Hoxd3_MA0912.1	4	1	+	9.918281162228288	9.314044433715914	CTAGGTTAATTACAGG
chr22	43025289	43025290	chr22:43025290:G:A	rs147407169	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr22	43025290	43025291	chr22:43025291:G:A	rs190819387	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr22	43066444	43066445	chr22:43066445:C:T	rs2235379	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	43109688	43109689	chr22:43109689:A:G	rs4988366	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr22	43326618	43326619	chr22:43326619:A:G	rs5759284	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr22	43979363	43979364	chr22:43979364:C:T	rs6519823	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr22	43979366	43979367	chr22:43979367:A:C	rs2235774	A	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr22	44233598	44233599	chr22:44233599:T:G	rs9614383	T	G	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr22	44367396	44367397	chr22:44367397:T:C	rs1557554	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr22	44367871	44367872	chr22:44367872:G:A	rs763041	G	A	A	Hoxd3_MA0912.1	1	1	+	9.228063163998822	10.085887437373012	CGGGGGTAATTAGCTT
chr22	44370612	44370613	chr22:44370613:G:A	rs369316778	G	A	g	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr22	44446630	44446631	chr22:44446631:A:G	rs133794	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr22	44538002	44538003	chr22:44538003:C:T	rs1124898	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	44575033	44575034	chr22:44575034:C:T	rs117423893	C	T	C	Hoxd3_MA0912.1	13	1	+	9.516054084696043	8.911817356183668	CAAGTTTAATTAACGT
chr22	44660925	44660926	chr22:44660926:T:C	rs117593922	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr22	44759407	44759408	chr22:44759408:C:T	rs7284294	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr22	44798471	44798472	chr22:44798472:T:G	rs78469259	T	G	T	Hoxd3_MA0912.1	10	1	+	8.538563202242011	6.5646208360614935	CTTAGCTAATTAGATC
chr22	44825113	44825114	chr22:44825114:G:A	rs6007308	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	44837638	44837639	chr22:44837639:A:T	rs2269537	A	T	a	Hoxd3_MA0912.1	14	1	+	7.359496590683806	7.915540839600098	CTGGGGTCATTGCTAT
chr22	45112673	45112674	chr22:45112674:T:C	rs139834529	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr22	45166015	45166016	chr22:45166016:C:T	rs73432268	C	T	C	Hoxd3_MA0912.1	12	1	+	7.745714793885833	6.53896287388097	CTGATCTAATGACAGA
chr22	45277049	45277050	chr22:45277050:A:G	rs80000651	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr22	45282254	45282255	chr22:45282255:G:C	rs62231127	G	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr22	45293320	45293321	chr22:45293321:C:G	rs112177270	C	G	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr22	45328845	45328846	chr22:45328846:G:A	rs6007592	G	A	G	Hoxd3_MA0912.1	6	1	-	7.440894705515527	9.22682065369652	GTGAGCCAATTACAGC
chr22	45478251	45478252	chr22:45478252:G:A	rs80169082	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr22	45547796	45547797	chr22:45547797:G:A	rs5764781	G	A	G	Hoxd3_MA0912.1	13	1	-	10.171458336567369	9.567221608054995	ATGTTGTAATTACCGC
chr22	45711224	45711225	chr22:45711225:G:A	rs138154	G	A	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr22	46289233	46289234	chr22:46289234:A:G	rs11703848	A	G	G	Hoxd3_MA0912.1	11	1	+	6.304934193016948	4.519008244835955	CTGAGCTCAGTACCCT
chr22	46813700	46813701	chr22:46813701:G:A	rs139579	G	A	g	Hoxd3_MA0912.1	14	1	-	7.854214013853968	7.2898775677216765	CAGAATTCATTACTCG
chr22	46815354	46815355	chr22:46815355:A:C	rs113311203	A	C	A	Hoxd3_MA0912.1	11	1	+	10.95706604600334	4.2124298765910115	TTGACTTAATTACTCT
chr22	46864668	46864669	chr22:46864669:T:A	rs9306518	T	A	T	Hoxd3_MA0912.1	11	1	-	10.286917142607479	5.949226081513437	ATGGAATAATTAACTT
chr22	46955001	46955002	chr22:46955002:G:A	rs73186520	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr22	47039797	47039798	chr22:47039798:C:T	rs9615450	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr22	47122934	47122935	chr22:47122935:G:A	rs2295245	G	A	G	Hoxd3_MA0912.1	5	1	+	7.757931063864517	7.033367687071194	TCAGGGTAATTAAAGG
chr22	47141057	47141058	chr22:47141058:T:C	rs56030604	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr22	47197580	47197581	chr22:47197581:G:A	rs9626697	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr22	47236592	47236593	chr22:47236593:A:G	rs113909532	A	G	A	Hoxd3_MA0912.1	0	1	-	10.317798815609999	10.265293318232068	TTGGACTAATTGACCT
chr22	47292998	47292999	chr22:47292999:G:A	rs562336989	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr22	47325222	47325223	chr22:47325223:C:T	rs36008375	C	T	C	Hoxd3_MA0912.1	5	1	+	8.269947353208448	8.587268795094856	CTTAACTAATGACACT
chr22	47357453	47357454	chr22:47357454:C:T	rs73887275	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr22	47388826	47388827	chr22:47388827:C:G	rs9627024	C	G	C	Hoxd3_MA0912.1	5	1	-	7.9625262519902185	7.773999918309381	TTGGAGTCATTAAGCC
chr22	47595179	47595180	chr22:47595180:T:C	rs135589	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr22	47782523	47782524	chr22:47782524:C:A	rs7288105	C	A	C	Hoxd3_MA0912.1	5	1	-	8.76542037200829	8.89421548021386	CAGACGTAATTACCTG
chr22	47806235	47806236	chr22:47806236:A:T	rs9615646	A	T	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr22	47806805	47806806	chr22:47806806:C:T	rs4823694	C	T	T	Hoxd3_MA0912.1	12	1	+	7.960949346790091	6.754197426785227	AAAAGTCAATTACCCT
chr22	48138873	48138874	chr22:48138874:C:A	rs5768367	C	A	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr22	48302442	48302443	chr22:48302443:C:A	rs133622	C	A	C	Hoxd3_MA0912.1	5	1	+	8.937757866122277	8.401720823009791	ATGAGCCAATTAAACC
chr22	48346843	48346844	chr22:48346844:A:G	rs2072725	A	G	G	Hoxd3_MA0912.1	15	1	-	12.244630840392952	11.466926271804944	TTGGTTTAATTAACGT
chr22	48428851	48428852	chr22:48428852:G:A	rs6007851	G	A	G	Hoxd3_MA0912.1	5	1	+	8.832646171075712	8.108082794282387	TTTGCGTAATTAAATT
chr22	48516186	48516187	chr22:48516187:G:A	rs5767181	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr22	48665766	48665767	chr22:48665767:G:A	rs11204495	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr22	48683340	48683341	chr22:48683341:G:A	rs6010583	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr22	48683354	48683355	chr22:48683355:G:A	rs62224990	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr22	48841118	48841119	chr22:48841119:A:G	rs28575250	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr22	48872114	48872115	chr22:48872115:G:C	rs28722784	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr22	48961735	48961736	chr22:48961736:G:C	rs5770529	G	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr22	49076827	49076828	chr22:49076828:G:A	rs76613815	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr22	49117938	49117939	chr22:49117939:A:G	rs135230	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr22	49140490	49140491	chr22:49140491:A:G	rs62221359	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr22	49273958	49273959	chr22:49273959:G:A	rs17825961	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr22	49286115	49286116	chr22:49286116:C:T	rs78877485	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr22	49395139	49395140	chr22:49395140:C:T	rs4824030	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr22	49535196	49535197	chr22:49535197:T:G	rs1807473	T	G	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr22	49619753	49619754	chr22:49619754:G:T	rs5769707	G	T	G	Hoxd3_MA0912.1	5	1	-	9.936677400181175	9.400640357068687	CTGCGCTAATTAGCTT
chr22	49747916	49747917	chr22:49747917:C:G	rs74696913	C	G	c	Hoxd3_MA0912.1	21	0	+	0	0	.
chr22	49768487	49768488	chr22:49768488:C:T	rs138814	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr22	49768514	49768515	chr22:49768515:T:C	rs60083915	T	C	T	Hoxd3_MA0912.1	8	1	-	7.627248139780798	0.7386756802154346	CTCATCTCATTACAGT
chr22	49833856	49833857	chr22:49833857:G:A	rs6009891	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	49868073	49868074	chr22:49868074:T:C	rs114569597	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr22	49919365	49919366	chr22:49919366:T:C	rs9616383	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr22	50066891	50066892	chr22:50066892:G:C	rs9617142	G	C	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr22	50087093	50087094	chr22:50087094:T:C	rs137934	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr22	50623574	50623575	chr22:50623575:G:A	rs79823940	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr22	50623622	50623623	chr22:50623623:G:T	rs6009939	G	T	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	160314	160315	chr3:160315:A:C	rs11128687	A	C	-	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	160350	160351	chr3:160351:T:C	rs1516348	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr3	1082315	1082316	chr3:1082316:A:G	rs73816422	A	G	A	Hoxd3_MA0912.1	9	1	-	7.627422317490744	0.7388498579253815	ATGGGCTCATTGCACT
chr3	1899675	1899676	chr3:1899676:A:G	rs9849648	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	1994041	1994042	chr3:1994042:C:T	rs2727950	C	T	T	Hoxd3_MA0912.1	15	1	+	9.715500522681051	10.49320509126906	TTGAACTAATTAATAC
chr3	2095900	2095901	chr3:2095901:T:A	rs2729288	T	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	2452879	2452880	chr3:2452880:C:G	rs990203	C	G	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	2691681	2691682	chr3:2691682:A:G	rs17018695	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	2873729	2873730	chr3:2873730:A:G	rs34758591	A	G	A	Hoxd3_MA0912.1	1	1	-	8.556518899179737	6.472458411643605	CTAGGTTAATTAAGTG
chr3	3088092	3088093	chr3:3088093:A:G	rs10510252	A	G	A	Hoxd3_MA0912.1	10	1	-	8.69410961494323	1.9144263723128032	CTGGGCTCATTATAGT
chr3	3121571	3121572	chr3:3121572:G:T	rs334799	G	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	3126731	3126732	chr3:3126732:G:C	rs78924331	G	C	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr3	3189957	3189958	chr3:3189958:C:G	rs1356614	C	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	3189962	3189963	chr3:3189963:C:T	rs3856852	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	3303573	3303574	chr3:3303574:T:C	rs1159830	T	C	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	3386371	3386372	chr3:3386372:A:G	rs13100659	A	G	A	Hoxd3_MA0912.1	11	1	+	7.644469628100801	5.858543679919807	CTGAGCTAATGATCAG
chr3	3741058	3741059	chr3:3741059:C:T	rs6785873	C	T	C	Hoxd3_MA0912.1	3	1	-	6.891646897813976	7.005744648852998	CAGGGCTAATGGCCCC
chr3	3984079	3984080	chr3:3984080:G:C	rs1125734	G	C	G	Hoxd3_MA0912.1	4	1	+	7.679755385279039	6.101677474565957	CTGTGGCCATTACCGC
chr3	3984094	3984095	chr3:3984095:G:A	rs1125735	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	4323875	4323876	chr3:4323876:C:T	rs711673	C	T	T	Hoxd3_MA0912.1	14	1	+	10.254777029581625	9.690440583449334	ATAGATTAATTAACCT
chr3	4343462	4343463	chr3:4343463:T:C	rs116072494	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	4343471	4343472	chr3:4343472:T:A	rs114738536	T	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	4565448	4565449	chr3:4565449:C:T	rs4685765	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	4841723	4841724	chr3:4841724:C:G	rs9824167	C	G	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	5047825	5047826	chr3:5047826:A:G	rs34191430	A	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	5304888	5304889	chr3:5304889:C:T	rs6781065	C	T	T	Hoxd3_MA0912.1	5	1	-	7.718104277218973	6.99354090042565	TGGGGGTCATTAACAT
chr3	5741113	5741114	chr3:5741114:T:C	rs75651660	T	C	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr3	6010054	6010055	chr3:6010055:A:G	rs772226779	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	6164948	6164949	chr3:6164949:C:T	rs13080576	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	7126411	7126412	chr3:7126412:G:A	rs77925390	G	A	G	Hoxd3_MA0912.1	14	1	+	9.896268793692329	8.952303463928196	ATGTGTTAATTGCCGT
chr3	7635553	7635554	chr3:7635554:G:C	rs4054134	G	C	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	7999642	7999643	chr3:7999643:G:A	rs11131103	G	A	G	Hoxd3_MA0912.1	3	1	-	8.108047236657564	8.844728459237238	TTGCGTTAATTGCCAG
chr3	8216486	8216487	chr3:8216487:G:A	rs17048855	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr3	8432314	8432315	chr3:8432315:C:G	rs13063070	C	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr3	8738751	8738752	chr3:8738752:C:T	rs237872	C	T	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	8738771	8738772	chr3:8738772:A:G	rs115598571	A	G	A	Hoxd3_MA0912.1	3	1	-	7.635208390785719	6.898527168206044	CAGTGGTAATGACAGC
chr3	8840338	8840339	chr3:8840339:T:C	rs11712906	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	8840376	8840377	chr3:8840377:C:T	rs345091	C	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	9121648	9121649	chr3:9121649:T:C	rs116183036	T	C	T	Hoxd3_MA0912.1	8	1	-	8.946560853308535	2.0579883937431713	ATGGGTTCATTAACTG
chr3	9169671	9169672	chr3:9169672:A:C	rs986119	A	C	A	Hoxd3_MA0912.1	9	1	-	7.785600971024462	3.2949237842574686	TTGGCCTAATTGATGC
chr3	9169682	9169683	chr3:9169683:A:G	rs986120	A	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	10259886	10259887	chr3:10259887:A:G	rs148519321	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	10643209	10643210	chr3:10643210:C:T	rs6442188	C	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	10649756	10649757	chr3:10649757:C:T	rs754662341	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	10649757	10649758	chr3:10649758:G:A	rs7355888	G	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr3	10695399	10695400	chr3:10695400:G:C	rs147339316	G	C	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	10812872	10812873	chr3:10812873:G:A	rs181669837	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr3	11137414	11137415	chr3:11137415:C:T	rs73128473	C	T	C	Hoxd3_MA0912.1	13	1	+	7.0074215535468	6.403184825034426	GAGAGGCAATTACCGC
chr3	11199601	11199602	chr3:11199602:C:T	rs558373966	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr3	11638769	11638770	chr3:11638770:G:C	rs2616544	G	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	11678463	11678464	chr3:11678464:T:C	rs11716409	T	C	C	Hoxd3_MA0912.1	5	1	+	8.970518464824975	8.653197022938567	CTGACTTAATGACCTT
chr3	11736648	11736649	chr3:11736649:A:C	rs528321068	A	C	A	Hoxd3_MA0912.1	13	1	-	8.21466332532421	7.240822143123502	TTGTGGTAATTGCTGA
chr3	12027331	12027332	chr3:12027332:C:T	rs111842412	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	12158405	12158406	chr3:12158406:A:C	rs111434411	A	C	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	13069841	13069842	chr3:13069842:C:T	rs114110843	C	T	C	Hoxd3_MA0912.1	14	1	-	8.417559671486963	7.473594341722828	CTGAGGTCATTGCTGT
chr3	13092086	13092087	chr3:13092087:G:A	rs80136581	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	13092109	13092110	chr3:13092110:T:C	rs633442	T	C	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	13158455	13158456	chr3:13158456:T:G	rs357168	T	G	T	Hoxd3_MA0912.1	0	1	+	9.96131040694562	7.924428479684579	TTGGACTAATTACGTT
chr3	13556545	13556546	chr3:13556546:C:T	rs4684953	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	13795085	13795086	chr3:13795086:T:C	rs4685028	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	14124320	14124321	chr3:14124321:A:G	rs775750411	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	14266697	14266698	chr3:14266698:G:C	rs547617479	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	14322117	14322118	chr3:14322118:A:C	rs77557652	A	C	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	14332909	14332910	chr3:14332910:G:T	rs113680471	G	T	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	14336131	14336132	chr3:14336132:G:T	rs874967	G	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	14363430	14363431	chr3:14363431:C:T	rs7650038	C	T	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr3	14384565	14384566	chr3:14384566:T:C	rs56016151	T	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	14598145	14598146	chr3:14598146:G:A	rs77783965	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	14702312	14702313	chr3:14702313:C:T	rs9866369	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr3	14716767	14716768	chr3:14716768:C:T	rs200974505	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	14867082	14867083	chr3:14867083:C:G	rs17040428	C	G	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	14920657	14920658	chr3:14920658:G:A	rs13327251	G	A	A	Hoxd3_MA0912.1	14	1	+	7.687713888163648	6.743748558399514	TAGTGGTAATGACAGC
chr3	15102796	15102797	chr3:15102797:A:G	rs9862697	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	15124090	15124091	chr3:15124091:G:A	rs17479028	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	15378122	15378123	chr3:15378123:G:A	rs148511910	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	15378136	15378137	chr3:15378137:C:T	rs61203721	C	T	T	Hoxd3_MA0912.1	15	1	-	7.824563539688345	6.983564912729129	CTGGGTTCATTGCCTG
chr3	15449773	15449774	chr3:15449774:G:A	rs73144198	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	15861823	15861824	chr3:15861824:G:T	rs11128765	G	T	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	16095060	16095061	chr3:16095061:T:A	rs12492383	T	A	A	Hoxd3_MA0912.1	9	1	+	11.36657078207176	6.875893595304767	TTGAATTAATTACATT
chr3	16095083	16095084	chr3:16095084:T:C	rs116265361	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	16144038	16144039	chr3:16144039:A:G	rs10865741	A	G	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	16850059	16850060	chr3:16850060:T:C	rs4392402	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	16899988	16899989	chr3:16899989:G:C	rs13065811	G	C	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	16901568	16901569	chr3:16901569:A:G	rs79763738	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr3	16993585	16993586	chr3:16993586:T:A	rs4685418	T	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr3	17303058	17303059	chr3:17303059:C:A	rs283941	C	A	A	Hoxd3_MA0912.1	14	1	+	8.032379071718724	6.911998376670144	CTCATCTAATTAGTCC
chr3	17990601	17990602	chr3:17990602:C:G	rs145792071	C	G	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr3	18179184	18179185	chr3:18179185:G:A	rs75676242	G	A	g	Hoxd3_MA0912.1	16	0	+	0	0	.
chr3	18246818	18246819	chr3:18246819:C:G	rs13078233	C	G	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	18505144	18505145	chr3:18505145:T:A	rs73041910	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	18735586	18735587	chr3:18735587:C:T	rs4618240	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr3	20061149	20061150	chr3:20061150:C:A	rs78622065	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	20435617	20435618	chr3:20435618:A:C	rs17193205	A	C	A	Hoxd3_MA0912.1	15	1	-	8.476810688109804	7.652801551480109	TTCCCTTAATTACCCT
chr3	20604795	20604796	chr3:20604796:T:C	rs4414869	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	20604820	20604821	chr3:20604821:A:G	rs76479371	A	G	A	Hoxd3_MA0912.1	0	1	-	8.959769964780968	8.907264467403039	TTGACATAATTAGAGT
chr3	21063105	21063106	chr3:21063106:G:C	rs9835240	G	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	21278776	21278777	chr3:21278777:G:A	rs9860226	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	21747253	21747254	chr3:21747254:T:C	rs11706906	T	C	T	Hoxd3_MA0912.1	13	1	+	9.470192567954506	10.07442929646688	TAGGTTTAATTAATAT
chr3	21803870	21803871	chr3:21803871:T:G	rs140799938	T	G	T	Hoxd3_MA0912.1	10	1	+	9.18624582515086	7.212303458970341	ATGGGATAATTAATCA
chr3	21808625	21808626	chr3:21808626:T:A	rs6802746	T	A	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr3	22021872	22021873	chr3:22021873:T:C	rs13098412	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	22307212	22307213	chr3:22307213:G:A	rs6550675	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr3	22887854	22887855	chr3:22887855:T:G	chr3:22887855:T:G	T	G	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	23002479	23002480	chr3:23002480:T:C	rs6792430	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	23116233	23116234	chr3:23116234:C:T	rs7631621	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	23116239	23116240	chr3:23116240:C:T	rs78223170	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	23657138	23657139	chr3:23657139:T:C	rs11928874	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr3	24290567	24290568	chr3:24290568:C:T	rs59343954	C	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	24312248	24312249	chr3:24312249:G:A	rs80264341	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	24615444	24615445	chr3:24615445:C:T	rs11926979	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	25024157	25024158	chr3:25024158:T:A	rs873391	T	A	A	Hoxd3_MA0912.1	12	1	-	9.933925583323093	8.72717366331823	GTGTTTTAATTAACCT
chr3	25024170	25024171	chr3:25024171:A:G	rs873390	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	25249902	25249903	chr3:25249903:C:G	rs6805272	C	G	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	25249916	25249917	chr3:25249917:T:A	rs13062742	T	A	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	25381284	25381285	chr3:25381285:A:G	rs7618590	A	G	G	Hoxd3_MA0912.1	1	1	-	8.179191636595952	6.0951311490598234	CTGGGCTAATGACAAC
chr3	25430548	25430549	chr3:25430549:T:C	rs755661	T	C	C	Hoxd3_MA0912.1	15	1	+	10.472316335449888	9.694611766861879	CTTTTGTAATTAACCT
chr3	25445268	25445269	chr3:25445269:C:G	rs76913742	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr3	25596423	25596424	chr3:25596424:A:G	rs61733682	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	25783951	25783952	chr3:25783952:C:T	rs66927313	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr3	26237541	26237542	chr3:26237542:G:A	rs62247627	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	26560246	26560247	chr3:26560247:T:G	rs56379425	T	G	T	Hoxd3_MA0912.1	3	1	+	9.037859970232104	9.488098665325372	CTGTGGTCATTAATCC
chr3	26562239	26562240	chr3:26562240:A:C	rs1602339	A	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	26719500	26719501	chr3:26719501:A:G	rs78226009	A	G	G	Hoxd3_MA0912.1	1	1	-	7.977644529429752	5.8935840418936225	CTGAGTTAATTGGGCC
chr3	27485590	27485591	chr3:27485591:C:T	rs76108070	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	27560917	27560918	chr3:27560918:C:A	rs11924110	C	A	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	27976997	27976998	chr3:27976998:T:C	rs182937007	T	C	T	Hoxd3_MA0912.1	8	1	-	8.57533509167757	1.6867626321122071	CTGATGCAATTAAATG
chr3	28155958	28155959	chr3:28155959:C:T	rs11705740	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	28941041	28941042	chr3:28941042:C:T	rs72920950	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	28973331	28973332	chr3:28973332:G:T	rs1449694	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	29381736	29381737	chr3:29381737:T:C	rs60242303	T	C	T	Hoxd3_MA0912.1	2	1	+	8.874184081720822	8.40790023357762	CTTAGCTAATGACTCT
chr3	29440372	29440373	chr3:29440373:T:A	rs1438337	T	A	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr3	29525882	29525883	chr3:29525883:G:C	rs117162321	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	29832721	29832722	chr3:29832722:A:G	rs7623709	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	31077983	31077984	chr3:31077984:T:C	rs140970509	T	C	T	Hoxd3_MA0912.1	8	1	-	9.003010026313353	2.1144375667479904	ATGAGATAATTGAAGT
chr3	31340510	31340511	chr3:31340511:T:C	rs17027379	T	C	T	Hoxd3_MA0912.1	11	1	-	9.884870927110295	8.098944978929302	ATGTGATAATTACCAT
chr3	31505598	31505599	chr3:31505599:G:C	rs11705937	G	C	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	31815546	31815547	chr3:31815547:G:A	rs12488832	G	A	A	Hoxd3_MA0912.1	2	1	+	7.903066446746013	6.453231402588974	CTGTGGTATTTAACCT
chr3	31895499	31895500	chr3:31895500:G:A	rs73824712	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	31923267	31923268	chr3:31923268:T:C	rs9835401	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	32021148	32021149	chr3:32021149:T:C	rs4955124	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	32144516	32144517	chr3:32144517:G:A	rs76954938	G	A	G	Hoxd3_MA0912.1	13	1	-	9.998423414680294	9.39418668616792	TAGAGGCAATTAACCT
chr3	32276509	32276510	chr3:32276510:A:G	rs143213948	A	G	A	Hoxd3_MA0912.1	10	1	-	7.558206771096042	0.7785235284656141	CACAGGCAATTACTCT
chr3	32338377	32338378	chr3:32338378:T:C	rs7637865	T	C	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	32410204	32410205	chr3:32410205:C:A	rs17029405	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	32452352	32452353	chr3:32452353:T:A	rs3732842	T	A	T	Hoxd3_MA0912.1	1	1	-	10.053479412999359	11.279715627161298	TAGGGCTAATTACTCG
chr3	32697644	32697645	chr3:32697645:A:G	rs6550152	A	G	A	Hoxd3_MA0912.1	1	1	-	9.338277516056191	7.254217028520062	TTGTTTTAATTAGCCA
chr3	32753105	32753106	chr3:32753106:T:C	rs9857753	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	34152899	34152900	chr3:34152900:A:G	rs4678459	A	G	G	Hoxd3_MA0912.1	1	1	+	9.14315064837811	8.285326375003919	CAGAGGTAATTATACC
chr3	34179932	34179933	chr3:34179933:T:C	rs72619965	T	C	T	Hoxd3_MA0912.1	3	1	-	8.467368301436299	8.353270550397275	CTGATTTAATTGCCTA
chr3	34387597	34387598	chr3:34387598:C:T	rs1211518	C	T	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	34889790	34889791	chr3:34889791:A:C	rs869226	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	34902362	34902363	chr3:34902363:A:T	rs56107524	A	T	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr3	35485987	35485988	chr3:35485988:A:G	rs17752659	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	35641611	35641612	chr3:35641612:C:G	rs9860326	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	35664236	35664237	chr3:35664237:A:G	rs9859804	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr3	35733622	35733623	chr3:35733623:T:A	rs67723420	T	A	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	35779915	35779916	chr3:35779916:A:C	rs2016975	A	C	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	35870523	35870524	chr3:35870524:C:A	rs75468562	C	A	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	35924374	35924375	chr3:35924375:G:A	rs12630429	G	A	A	Hoxd3_MA0912.1	13	1	+	8.281238125807977	9.255079308008686	ATGAGTCAATTAAGCC
chr3	36124532	36124533	chr3:36124533:T:C	rs7636488	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	36296270	36296271	chr3:36296271:C:T	rs6765042	C	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	36368108	36368109	chr3:36368109:T:G	rs2605393	T	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	36880512	36880513	chr3:36880513:T:A	rs4340652	T	A	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	37184500	37184501	chr3:37184501:A:G	rs113134154	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	37200337	37200338	chr3:37200338:G:A	rs17036099	G	A	g	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	37715603	37715604	chr3:37715604:G:A	rs9841848	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	37944526	37944527	chr3:37944527:G:A	rs73058952	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr3	38000690	38000691	chr3:38000691:T:G	rs928807	T	G	G	Hoxd3_MA0912.1	8	1	-	8.381156969255931	3.8904797824889394	CAGTGGCAATTACCGG
chr3	38025645	38025646	chr3:38025646:C:G	rs549535865	C	G	C	Hoxd3_MA0912.1	2	1	-	7.681050445379011	5.897576027685064	CTGGGTTAATGGGCTT
chr3	38623710	38623711	chr3:38623711:G:T	rs7624535	G	T	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	38626700	38626701	chr3:38626701:A:G	rs7647031	A	G	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	38829578	38829579	chr3:38829579:G:A	rs56166321	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	38829604	38829605	chr3:38829605:C:T	rs72869661	C	T	C	Hoxd3_MA0912.1	12	1	+	9.440323416209978	8.233571496205114	TTGCTGTAATTACCCA
chr3	39263302	39263303	chr3:39263303:C:T	rs11129820	C	T	T	Hoxd3_MA0912.1	12	1	+	7.779520003297188	6.572768083292324	TTGGTCTCATTGCCTT
chr3	39809074	39809075	chr3:39809075:G:A	rs906606936	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	40243240	40243241	chr3:40243241:G:A	rs6599082	G	A	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	40337185	40337186	chr3:40337186:C:T	rs10865895	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr3	40337246	40337247	chr3:40337247:T:C	rs2123999	T	C	T	Hoxd3_MA0912.1	11	1	-	8.478872750239612	6.6929468020586205	TTGACCTAATTATTGC
chr3	40409396	40409397	chr3:40409397:C:T	rs17078941	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr3	40997940	40997941	chr3:40997941:C:A	rs375962021	C	A	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	41054430	41054431	chr3:41054431:A:C	rs380285	A	C	C	Hoxd3_MA0912.1	12	1	+	8.690742861876394	8.690742861876394	ATGATTCAATTAACTC
chr3	41404697	41404698	chr3:41404698:C:T	rs9812079	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	41419355	41419356	chr3:41419356:T:C	rs73828020	T	C	T	Hoxd3_MA0912.1	12	1	-	8.395014639387982	7.427492408448954	GTGATCTAATTGACCT
chr3	41500978	41500979	chr3:41500979:G:A	rs9821623	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	41683675	41683676	chr3:41683676:C:G	rs77703423	C	G	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	41881516	41881517	chr3:41881517:G:A	rs73081392	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	42025463	42025464	chr3:42025464:A:G	rs17066713	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	42033121	42033122	chr3:42033122:C:T	rs182337852	C	T	C	Hoxd3_MA0912.1	13	1	+	8.541116835024871	7.936880106512498	TCTGGGTAATTACCGC
chr3	42190145	42190146	chr3:42190146:G:C	rs4682998	G	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	42880598	42880599	chr3:42880599:G:A	rs1235515114	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	42891101	42891102	chr3:42891102:A:G	rs2114881	A	G	A	Hoxd3_MA0912.1	11	1	+	10.926525089487097	9.140599141306103	TGGAGGTAATTACCCT
chr3	43223903	43223904	chr3:43223904:A:G	rs9861529	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	43411878	43411879	chr3:43411879:G:A	rs187790256	G	A	G	Hoxd3_MA0912.1	12	1	-	9.156221014735085	7.949469094730222	GTGAGTTAATTACATC
chr3	43754586	43754587	chr3:43754587:G:A	rs148448576	G	A	G	Hoxd3_MA0912.1	6	1	-	6.801193975066608	8.587119923247599	CTGGGACAATGACAGC
chr3	43966464	43966465	chr3:43966465:T:C	rs11921942	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr3	44422442	44422443	chr3:44422443:C:A	rs6790566	C	A	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	45200522	45200523	chr3:45200523:A:G	rs6803642	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr3	45412906	45412907	chr3:45412907:C:T	rs35019595	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	45577190	45577191	chr3:45577191:C:A	rs367672921	C	A	c	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	45577202	45577203	chr3:45577203:C:G	rs35848059	C	G	c	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	45692991	45692992	chr3:45692992:A:C	rs7613833	A	C	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	45832916	45832917	chr3:45832917:A:G	rs75212627	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	45908377	45908378	chr3:45908378:C:T	chr3:45908378:C:T	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	45948496	45948497	chr3:45948497:T:C	rs114052321	T	C	T	Hoxd3_MA0912.1	9	1	+	8.469001676377223	1.5804292168118608	CAGTGATAATGACCCT
chr3	46050241	46050242	chr3:46050242:C:G	rs35435608	C	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	46443861	46443862	chr3:46443862:G:A	rs7624071	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	46443877	46443878	chr3:46443878:G:A	rs7626288	G	A	G	Hoxd3_MA0912.1	14	1	+	6.861779230625027	5.917813900860892	CTCAGCTCATGACCGT
chr3	46454225	46454226	chr3:46454226:C:T	rs17135	C	T	C	Hoxd3_MA0912.1	12	1	-	10.685963837758695	11.653486068697726	TTGAGCTAATTAGATT
chr3	46612691	46612692	chr3:46612692:G:T	rs17079007	G	T	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr3	46614860	46614861	chr3:46614861:A:G	rs873382	A	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	46626054	46626055	chr3:46626055:C:A	rs534912540	C	A	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	46683057	46683058	chr3:46683058:C:T	rs9847395	C	T	T	Hoxd3_MA0912.1	14	1	+	7.901990613018867	7.337654166886576	CTGAGACAATTAGGCT
chr3	46683078	46683079	chr3:46683079:C:T	rs9847407	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	46724395	46724396	chr3:46724396:G:T	rs56720140	G	T	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	46959115	46959116	chr3:46959116:T:C	rs11130110	T	C	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	47154718	47154719	chr3:47154719:C:A	rs6766230	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	49249184	49249185	chr3:49249185:T:G	rs4955443	T	G	G	Hoxd3_MA0912.1	11	1	-	10.51221661782997	3.7675804484176414	CTTTGGTAATTAACTT
chr3	49393449	49393450	chr3:49393450:G:A	rs62259944	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	49421942	49421943	chr3:49421943:T:C	rs1464566	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	49485376	49485377	chr3:49485377:T:C	rs765021264	T	C	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	49485388	49485389	chr3:49485389:A:C	rs115890970	A	C	A	Hoxd3_MA0912.1	7	1	+	9.868070036198043	7.894127670017525	TTGTTGTAATGACCCT
chr3	49793598	49793599	chr3:49793599:A:G	rs115485248	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	50151623	50151624	chr3:50151624:T:C	rs2526394	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	50235765	50235766	chr3:50235766:C:T	chr3:50235766:C:T	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	50340811	50340812	chr3:50340812:G:C	rs116422509	G	C	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	50586143	50586144	chr3:50586144:T:A	rs3749265	T	A	C	Hoxd3_MA0912.1	9	1	+	8.816286317763288	4.3256091309962965	CTGAGGTAATTGGCTG
chr3	52109487	52109488	chr3:52109488:C:A	rs9874939	C	A	C	Hoxd3_MA0912.1	2	1	-	9.701563018482847	8.384372448932105	TTGTTTTAATTAAACA
chr3	52279827	52279828	chr3:52279828:T:C	rs73088787	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	52411495	52411496	chr3:52411496:C:T	rs530899171	C	T	C	Hoxd3_MA0912.1	14	1	-	7.839736924754435	6.8957715949903005	CTGAGGAAATTACTGT
chr3	52658107	52658108	chr3:52658108:G:A	rs2336149	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	52685071	52685072	chr3:52685072:C:T	rs3733039	C	T	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	52814190	52814191	chr3:52814191:C:T	rs77347777	C	T	C	Hoxd3_MA0912.1	14	1	-	8.009260929688805	7.0652955999246725	CTGAGCCCATTACCGG
chr3	52857931	52857932	chr3:52857932:G:A	rs114377412	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	53197201	53197202	chr3:53197202:C:T	rs190462839	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	54083821	54083822	chr3:54083822:A:C	rs1449334	A	C	c	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr3	54200694	54200695	chr3:54200695:A:G	rs4485754	A	G	A	Hoxd3_MA0912.1	7	1	+	7.3225099025616895	0.5428266599312617	CTGCTGTAATTGCCAG
chr3	54322987	54322988	chr3:54322988:T:C	rs59369555	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr3	54599711	54599712	chr3:54599712:A:G	rs1851043	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	54624962	54624963	chr3:54624963:C:T	rs79074094	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr3	54624981	54624982	chr3:54624982:C:T	rs34836904	C	T	C	Hoxd3_MA0912.1	2	1	+	8.015031488174916	8.481315336318122	CTCGGTTAATTGCCTG
chr3	54771782	54771783	chr3:54771783:T:C	rs13083683	T	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	54878393	54878394	chr3:54878394:G:T	rs77997915	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	54913974	54913975	chr3:54913975:T:C	rs1125025	T	C	t	Hoxd3_MA0912.1	1	1	+	8.019204526936528	5.935144039400399	GTGTTGTAATTGCCCT
chr3	55228437	55228438	chr3:55228438:A:G	rs379842	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	55431996	55431997	chr3:55431997:T:A	rs6445741	T	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	55461229	55461230	chr3:55461230:C:T	rs71309913	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	55569540	55569541	chr3:55569541:A:T	rs1499888	A	T	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	56552155	56552156	chr3:56552156:G:A	rs769537653	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	56634493	56634494	chr3:56634494:C:T	rs11130536	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	56693537	56693538	chr3:56693538:G:A	rs72499037	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	56723223	56723224	chr3:56723224:C:T	rs11919130	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	56997992	56997993	chr3:56997993:G:A	rs6802094	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	57111514	57111515	chr3:57111515:G:A	rs9826642	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	57128249	57128250	chr3:57128250:G:A	rs75139370	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	57902597	57902598	chr3:57902598:A:G	rs73088398	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	58032379	58032380	chr3:58032380:G:C	rs1658397	G	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	58049393	58049394	chr3:58049394:C:T	rs115032985	C	T	C	Hoxd3_MA0912.1	4	1	-	8.769340333547158	8.165103605034783	TTCAGCTAATTACTCA
chr3	58391264	58391265	chr3:58391265:G:A	rs11923253	G	A	G	Hoxd3_MA0912.1	14	1	-	8.429973855858002	7.865637409725712	CTGCTTTCATTAACCC
chr3	58434814	58434815	chr3:58434815:T:C	rs11924677	T	C	C	Hoxd3_MA0912.1	2	1	-	7.516899232805749	8.966734276962788	CCAGTCTAATTACCGG
chr3	58560833	58560834	chr3:58560834:T:C	rs7635105	T	C	c	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr3	58631816	58631817	chr3:58631817:C:T	rs4681881	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	58631826	58631827	chr3:58631827:C:A	rs6777360	C	A	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	59126789	59126790	chr3:59126790:A:C	rs12485713	A	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	59289191	59289192	chr3:59289192:G:A	rs76806197	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	59379311	59379312	chr3:59379312:T:A	rs7612544	T	A	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	59380620	59380621	chr3:59380621:G:A	rs73100148	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr3	59452025	59452026	chr3:59452026:T:C	rs57692548	T	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	59452060	59452061	chr3:59452061:A:G	rs74398550	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	59612365	59612366	chr3:59612366:A:G	rs9831268	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	59982741	59982742	chr3:59982742:T:C	rs75255034	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	59998001	59998002	chr3:59998002:G:A	rs17254574	G	A	G	Hoxd3_MA0912.1	5	1	-	8.642682900526214	8.960004342412622	CTGTCCTAATTATCCC
chr3	60014325	60014326	chr3:60014326:C:T	rs17061792	C	T	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	60215985	60215986	chr3:60215986:C:T	rs734156	C	T	C	Hoxd3_MA0912.1	2	1	+	8.563480625480215	9.029764473623416	CACATGTAATTACAGT
chr3	60241863	60241864	chr3:60241864:C:A	rs213390	C	A	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	60250569	60250570	chr3:60250570:T:C	rs1496652	T	C	T	Hoxd3_MA0912.1	9	1	+	8.288503348285886	1.3999308887205237	TAGGGTCAATTACAAT
chr3	60290992	60290993	chr3:60290993:C:T	rs732380	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	61334815	61334816	chr3:61334816:T:C	rs12490112	T	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	61541869	61541870	chr3:61541870:G:T	rs76803894	G	T	G	Hoxd3_MA0912.1	11	1	+	8.811526393981321	6.259761281068274	CTGGATTAATTGTCTT
chr3	61560461	61560462	chr3:61560462:T:G	rs114884372	T	G	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	61571007	61571008	chr3:61571008:C:T	rs77462120	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	61669517	61669518	chr3:61669518:G:A	rs6791564	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	61926544	61926545	chr3:61926545:C:T	rs72884108	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	61956210	61956211	chr3:61956211:C:T	rs43182	C	T	C	Hoxd3_MA0912.1	14	1	-	8.343708217362893	7.3997428875987605	CACAAGTAATTAACGG
chr3	61966244	61966245	chr3:61966245:G:A	rs56104651	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	62007991	62007992	chr3:62007992:A:G	rs9311833	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	62008029	62008030	chr3:62008030:G:T	rs9825906	G	T	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	62011692	62011693	chr3:62011693:G:T	rs6794405	G	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	63052271	63052272	chr3:63052272:C:T	rs749244	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	63240002	63240003	chr3:63240003:T:A	rs12632294	T	A	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr3	63600613	63600614	chr3:63600614:G:C	rs1874386	G	C	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	63613511	63613512	chr3:63613512:C:T	rs7627288	C	T	C	Hoxd3_MA0912.1	14	1	-	9.719657160066353	8.77569183030222	CTGATCTAATTAAAGA
chr3	63617833	63617834	chr3:63617834:A:G	rs905941	A	G	G	Hoxd3_MA0912.1	1	1	-	7.580633793105001	5.4965733055688695	CTGAGTTCATGACAGC
chr3	64144389	64144390	chr3:64144390:A:G	rs697269	A	G	A	Hoxd3_MA0912.1	5	1	-	8.908935781903352	8.591614340016944	CTTGCTTAATTACATT
chr3	64191597	64191598	chr3:64191598:G:A	rs62251772	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	64323038	64323039	chr3:64323039:G:A	rs1462740	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	64340603	64340604	chr3:64340604:T:C	rs75026650	T	C	T	Hoxd3_MA0912.1	13	1	-	9.703408402586822	8.729567220386114	CTCGGCTAATTAAATT
chr3	64405776	64405777	chr3:64405777:T:A	rs719775	T	A	A	Hoxd3_MA0912.1	7	1	-	8.843299979390974	2.0636167367605465	CTGAAGTAATTGCTAT
chr3	64442619	64442620	chr3:64442620:T:C	rs930529	T	C	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	64859758	64859759	chr3:64859759:A:G	rs61011508	A	G	A	Hoxd3_MA0912.1	0	1	-	8.767398718741424	8.714893221363493	TTGAAGTCATTACCCA
chr3	64894701	64894702	chr3:64894702:G:A	rs704444	G	A	G	Hoxd3_MA0912.1	3	1	+	8.81684838688818	8.930946137927204	TATGGTTAATTACCCA
chr3	64911595	64911596	chr3:64911596:C:A	rs793295	C	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	64957650	64957651	chr3:64957651:G:A	rs793363	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	64976554	64976555	chr3:64976555:C:T	rs12107001	C	T	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	65138776	65138777	chr3:65138777:G:T	rs4688541	G	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	65276691	65276692	chr3:65276692:C:T	rs41444448	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	65334943	65334944	chr3:65334944:G:T	rs1318477	G	T	G	Hoxd3_MA0912.1	12	1	-	8.642537946222047	8.642537946222047	TTGGATTAATTGCTTG
chr3	65375527	65375528	chr3:65375528:C:G	rs13321366	C	G	G	Hoxd3_MA0912.1	0	1	+	8.873060002036246	6.888683572153137	CAGGATTAATTACACA
chr3	65500348	65500349	chr3:65500349:T:C	rs1524975	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	65523770	65523771	chr3:65523771:T:A	rs62255325	T	A	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	65756881	65756882	chr3:65756882:G:A	rs11719170	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	65964227	65964228	chr3:65964228:C:A	rs117603829	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	65979749	65979750	chr3:65979750:G:T	rs17074219	G	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	66240124	66240125	chr3:66240125:C:T	rs139443276	C	T	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	66304144	66304145	chr3:66304145:A:G	rs782743	A	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	66378377	66378378	chr3:66378378:C:T	rs148174157	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	66491241	66491242	chr3:66491242:C:T	rs78767823	C	T	T	Hoxd3_MA0912.1	15	1	-	7.117274940199175	6.276276313239959	GAGGGATAATTAGCCG
chr3	66693974	66693975	chr3:66693975:T:C	rs2365034	T	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	66854859	66854860	chr3:66854860:T:C	chr3:66854860:T:C	T	C	T	Hoxd3_MA0912.1	4	1	-	9.147617298005276	9.75185402651765	CTAGATTAATTATCTT
chr3	66863772	66863773	chr3:66863773:T:C	rs115044961	T	C	T	Hoxd3_MA0912.1	8	1	-	10.66655292967987	3.777980470114509	TTGGCTTAATTACTGT
chr3	67044493	67044494	chr3:67044494:T:C	rs1038591635	T	C	t	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	67068677	67068678	chr3:67068678:C:T	rs7652660	C	T	C	Hoxd3_MA0912.1	4	1	-	9.715462434710286	9.111225706197912	ATGAGCCAATTAAACT
chr3	67386519	67386520	chr3:67386520:T:C	rs114676055	T	C	T	Hoxd3_MA0912.1	8	1	-	9.971513439947422	3.08294098038206	TTGAGTCAATTAAACC
chr3	68020083	68020084	chr3:68020084:G:A	rs73837233	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	68288449	68288450	chr3:68288450:A:G	rs9843318	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	68753286	68753287	chr3:68753287:A:C	rs62254074	A	C	A	Hoxd3_MA0912.1	10	1	-	9.125788205081347	7.1518458389008295	ATCATGTAATTAATGT
chr3	69292188	69292189	chr3:69292189:G:T	rs35548440	G	T	T	Hoxd3_MA0912.1	13	1	-	9.958908224949575	9.3546714964372	CTGAGTTAATTGCCTC
chr3	69390620	69390621	chr3:69390621:G:A	rs11706729	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	69579951	69579952	chr3:69579952:T:C	rs288503	T	C	C	Hoxd3_MA0912.1	2	1	+	9.07761095870125	8.611327110558046	CTTGAATAATTAACAT
chr3	69683287	69683288	chr3:69683288:G:A	rs13090155	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	70571779	70571780	chr3:70571780:T:C	rs4974276	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	70834025	70834026	chr3:70834026:A:G	rs2573174	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	70982704	70982705	chr3:70982705:T:A	rs532233871	T	A	T	Hoxd3_MA0912.1	2	1	+	10.613716658653306	10.481072184047012	TTTAATTAATTAATCT
chr3	71444132	71444133	chr3:71444133:G:T	rs553020434	G	T	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	71484226	71484227	chr3:71484227:G:C	rs13327339	G	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	71790250	71790251	chr3:71790251:G:A	rs1343839	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	71797971	71797972	chr3:71797972:A:G	rs7629632	A	G	A	Hoxd3_MA0912.1	8	1	+	8.50480572594762	1.6162332663822578	TGGTTTTAATTACTCC
chr3	71869279	71869280	chr3:71869280:T:C	rs10865661	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr3	71901686	71901687	chr3:71901687:C:T	rs73105069	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	71949702	71949703	chr3:71949703:C:A	rs11920820	C	A	C	Hoxd3_MA0912.1	0	1	+	8.353270550397275	7.689341915836469	CTGGGTTAATTGCATA
chr3	71968645	71968646	chr3:71968646:T:A	rs6804670	T	A	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	72051975	72051976	chr3:72051976:A:G	rs2055642	A	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	72174306	72174307	chr3:72174307:G:A	rs75151083	G	A	g	Hoxd3_MA0912.1	0	1	-	7.649321762061181	7.701827259439112	CTGCTTTCATTACAGC
chr3	72232761	72232762	chr3:72232762:C:G	rs4339079	C	G	C	Hoxd3_MA0912.1	5	1	+	6.498560412211875	6.687086745892712	TTGAGCCCATTGCCCC
chr3	72256349	72256350	chr3:72256350:G:C	chr3:72256350:G:C	G	C	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	72267210	72267211	chr3:72267211:A:T	rs9829317	A	T	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr3	72288303	72288304	chr3:72288304:A:G	rs13313998	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	72351870	72351871	chr3:72351871:C:T	rs56388700	C	T	C	Hoxd3_MA0912.1	3	1	-	8.528665208196953	8.642762959235977	GTGGGCTAATTAAGTT
chr3	72658701	72658702	chr3:72658702:T:A	rs17010083	T	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	73035124	73035125	chr3:73035125:T:A	rs75352225	T	A	T	Hoxd3_MA0912.1	14	1	+	9.39642985759778	8.84038560868149	ATGGGCTAATTATCTG
chr3	73035135	73035136	chr3:73035136:A:G	rs6803336	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	73060304	73060305	chr3:73060305:G:C	rs58431727	G	C	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr3	73449875	73449876	chr3:73449876:G:A	rs3863974	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	73527927	73527928	chr3:73527928:T:C	rs113068017	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr3	73624935	73624936	chr3:73624936:C:G	rs572357886	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr3	73719368	73719369	chr3:73719369:G:A	rs4677337	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	73759079	73759080	chr3:73759080:C:T	rs12638673	C	T	C	Hoxd3_MA0912.1	14	1	+	7.805836404480811	7.241499958348521	GTGAGGCAATTAAACC
chr3	73792243	73792244	chr3:73792244:T:C	rs291525	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	73828080	73828081	chr3:73828081:T:A	rs144667330	T	A	T	Hoxd3_MA0912.1	2	1	+	9.621890233739402	9.489245759133107	CATAGCTAATTAAACT
chr3	73910840	73910841	chr3:73910841:A:T	rs1405390	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr3	74080248	74080249	chr3:74080249:A:G	rs17012033	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	74214313	74214314	chr3:74214314:T:C	rs6780663	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr3	74537282	74537283	chr3:74537283:A:G	rs144945324	A	G	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	74673763	74673764	chr3:74673764:C:T	rs9874426	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	75518211	75518212	chr3:75518212:C:A	rs2202806	C	A	.	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	76293390	76293391	chr3:76293391:G:C	rs34865979	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	76517634	76517635	chr3:76517635:T:C	rs3913569	T	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	76680055	76680056	chr3:76680056:A:T	rs2166784	A	T	A	Hoxd3_MA0912.1	4	1	-	8.619544491080536	8.619544491080536	TAGCTTTAATTACCTG
chr3	76702860	76702861	chr3:76702861:T:G	rs2608137	T	G	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	76761144	76761145	chr3:76761145:A:G	rs4855989	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	76786583	76786584	chr3:76786584:A:G	rs35782091	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr3	77181321	77181322	chr3:77181322:G:A	rs35096854	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	77368944	77368945	chr3:77368945:G:A	rs9835355	G	A	A	Hoxd3_MA0912.1	1	1	-	9.109042454459994	11.193102941996125	TCGAATTAATTAACTC
chr3	77476913	77476914	chr3:77476914:G:A	rs12634489	G	A	G	Hoxd3_MA0912.1	12	1	-	9.340122918513309	8.133370998508445	CTGTTTTCATTACACT
chr3	77586058	77586059	chr3:77586059:C:T	rs34171318	C	T	C	Hoxd3_MA0912.1	15	1	-	9.64971214821888	8.808713521259664	ATGTTTTAATTAATGG
chr3	77586090	77586091	chr3:77586091:G:A	rs775740	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	77586539	77586540	chr3:77586540:C:T	rs775739	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	77708879	77708880	chr3:77708880:C:T	rs12635540	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	77780685	77780686	chr3:77780686:T:A	rs73843784	T	A	T	Hoxd3_MA0912.1	5	1	+	9.629465057577942	8.776106572579048	TTGCATTAATTAAAGG
chr3	77780704	77780705	chr3:77780705:A:G	rs75181598	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	77781973	77781974	chr3:77781974:T:C	rs73120530	T	C	T	Hoxd3_MA0912.1	15	1	-	9.452441261996327	10.293439888955543	TTGAAATAATTACCTA
chr3	78029772	78029773	chr3:78029773:A:G	rs12495287	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	78614860	78614861	chr3:78614861:G:T	rs3732661	G	T	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	78670426	78670427	chr3:78670427:C:G	rs9309810	C	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	78670886	78670887	chr3:78670887:A:G	rs3773224	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr3	78690608	78690609	chr3:78690609:A:G	rs73109717	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	78786587	78786588	chr3:78786588:A:C	rs4681011	A	C	A	Hoxd3_MA0912.1	9	1	-	10.347873701851817	5.8571965150848255	ATGATGTAATTACCTC
chr3	78935415	78935416	chr3:78935416:C:T	rs6772919	C	T	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr3	78979368	78979369	chr3:78979369:C:T	rs61586777	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr3	79548965	79548966	chr3:79548966:G:T	rs76828671	G	T	G	Hoxd3_MA0912.1	3	1	+	7.139724182566486	6.689485487473217	CTGGGGTCATTGCCAG
chr3	79709797	79709798	chr3:79709798:A:T	rs4856621	A	T	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	80979782	80979783	chr3:80979783:C:T	rs2578313	C	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	80997520	80997521	chr3:80997521:G:T	rs13093550	G	T	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr3	81161823	81161824	chr3:81161824:G:A	rs114803310	G	A	G	Hoxd3_MA0912.1	4	1	+	9.461647769293734	8.85741104078136	CAGCGCTAATTAAAGT
chr3	81531912	81531913	chr3:81531913:T:C	rs9871153	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	81842324	81842325	chr3:81842325:A:G	rs13091492	A	G	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	81997055	81997056	chr3:81997056:G:A	rs9816690	G	A	G	Hoxd3_MA0912.1	13	1	-	8.125940718121692	7.521703989609318	AAGAGCCAATTAGCCT
chr3	82063622	82063623	chr3:82063623:G:C	rs73132394	G	C	G	Hoxd3_MA0912.1	11	1	+	9.466547082851742	4.507836861620406	TTGGTTTAATTGCTTT
chr3	82891292	82891293	chr3:82891293:G:A	rs6793283	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	82891298	82891299	chr3:82891299:T:C	rs9857903	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	84041845	84041846	chr3:84041846:T:G	rs992753646	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	84904774	84904775	chr3:84904775:G:T	rs1691485	G	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr3	85089666	85089667	chr3:85089667:T:C	rs9883252	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	85738080	85738081	chr3:85738081:A:C	rs75089258	A	C	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	87041756	87041757	chr3:87041757:G:T	rs6807997	G	T	G	Hoxd3_MA0912.1	2	1	+	8.500991194426486	7.183800624875742	ATGGTACAATTACCTT
chr3	87298281	87298282	chr3:87298282:G:A	rs2646222	G	A	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	87298315	87298316	chr3:87298316:T:C	rs2642318	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	87298318	87298319	chr3:87298319:T:C	rs146899683	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr3	87501429	87501430	chr3:87501430:G:A	rs7629379	G	A	G	Hoxd3_MA0912.1	14	1	+	8.46191663281251	7.517951303048376	AGGAAGTAATTAGCGT
chr3	88060180	88060181	chr3:88060181:A:G	rs142988473	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	88138014	88138015	chr3:88138015:T:G	rs151230729	T	G	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	88257521	88257522	chr3:88257522:C:T	rs6551305	C	T	C	Hoxd3_MA0912.1	15	1	-	9.367365514641872	8.526366887682656	CTGATCTCATTAACCG
chr3	88886333	88886334	chr3:88886334:G:A	rs553867609	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	88962267	88962268	chr3:88962268:C:G	rs4855820	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	89663041	89663042	chr3:89663042:C:T	rs73153252	C	T	C	Hoxd3_MA0912.1	15	1	+	8.690742861876394	9.468447430464403	ATGATTCAATTACCTC
chr3	89809543	89809544	chr3:89809544:A:G	rs114949521	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	90226541	90226542	chr3:90226542:A:G	rs7433265	A	G	a	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	90226545	90226546	chr3:90226546:G:A	rs6766992	G	A	g	Hoxd3_MA0912.1	13	1	-	7.915744185193165	7.3115074566807925	ATAAGCTAATTGCCGC
chr3	93913105	93913106	chr3:93913106:T:C	rs137920921	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	94317103	94317104	chr3:94317104:G:A	rs78795635	G	A	g	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	94734436	94734437	chr3:94734437:G:A	rs62271492	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	94734454	94734455	chr3:94734455:C:A	rs11706923	C	A	C	Hoxd3_MA0912.1	4	1	+	9.185506185970272	10.15934736817098	ATGACCTAATTACCTC
chr3	94788226	94788227	chr3:94788227:A:G	rs555348408	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	95438698	95438699	chr3:95438699:C:T	rs13090887	C	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	95460694	95460695	chr3:95460695:C:T	rs7618863	C	T	C	Hoxd3_MA0912.1	12	1	+	8.503764541925351	7.297012621920487	CTCTAATAATTACCCC
chr3	95461073	95461074	chr3:95461074:A:G	rs7632733	A	G	g	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	95606492	95606493	chr3:95606493:C:T	rs6437949	C	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	95654765	95654766	chr3:95654766:C:A	rs13066397	C	A	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr3	95992951	95992952	chr3:95992952:C:G	rs4535242	C	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	96267165	96267166	chr3:96267166:T:C	rs530791919	T	C	t	Hoxd3_MA0912.1	3	1	-	9.549529226257901	9.435431475218877	CAGATGTAATTAAGCT
chr3	96450261	96450262	chr3:96450262:G:A	rs116669649	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	98563510	98563511	chr3:98563511:A:G	rs2316127	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	98563526	98563527	chr3:98563527:T:A	rs74538103	T	A	T	Hoxd3_MA0912.1	1	1	+	8.963802890380544	7.737566676218606	CTGTTTTAATTGCTTT
chr3	98895323	98895324	chr3:98895324:T:C	rs115001465	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	99286456	99286457	chr3:99286457:A:G	rs115082708	A	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr3	99319799	99319800	chr3:99319800:C:T	rs1383843	C	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	99331002	99331003	chr3:99331003:A:G	rs72936399	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr3	99411151	99411152	chr3:99411152:T:C	rs2464139	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	99911088	99911089	chr3:99911089:G:A	rs76686852	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	100844763	100844764	chr3:100844764:T:C	rs529157513	T	C	T	Hoxd3_MA0912.1	14	1	+	9.211327810307738	9.77566425644003	CTGAAGTCATTACATT
chr3	100870098	100870099	chr3:100870099:T:A	rs12330531	T	A	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	100870138	100870139	chr3:100870139:T:A	rs138776557	T	A	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	101643744	101643745	chr3:101643745:A:G	rs4683939	A	G	a	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	101888976	101888977	chr3:101888977:G:T	rs78880544	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	102268890	102268891	chr3:102268891:T:C	rs11922579	T	C	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	102268896	102268897	chr3:102268897:C:G	rs60752937	C	G	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	103872022	103872023	chr3:103872023:A:G	rs1921337	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	104031108	104031109	chr3:104031109:C:G	rs1179236	C	G	C	Hoxd3_MA0912.1	15	1	+	9.654191998061014	9.607887430019328	TTGATCCAATTACCCC
chr3	104388590	104388591	chr3:104388591:C:T	rs11720877	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	104438495	104438496	chr3:104438496:A:T	chr3:104438496:A:T	A	T	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr3	104547048	104547049	chr3:104547049:A:C	rs62260601	A	C	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	105274351	105274352	chr3:105274352:G:T	rs2399043	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr3	105473845	105473846	chr3:105473846:G:T	rs13317379	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	105499649	105499650	chr3:105499650:G:A	rs6796658	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	105502571	105502572	chr3:105502572:G:A	rs1017915	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	105728901	105728902	chr3:105728902:G:A	rs1867189	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	105728920	105728921	chr3:105728921:T:C	rs16851523	T	C	T	Hoxd3_MA0912.1	12	1	-	9.144768447281834	8.177246216342803	TTTATGTAATTAACAG
chr3	105846770	105846771	chr3:105846771:G:A	rs11921710	G	A	G	Hoxd3_MA0912.1	5	1	+	9.163236956974385	8.438673580181062	ATGTGGTAATTGATGT
chr3	106424909	106424910	chr3:106424910:G:T	rs34583397	G	T	T	Hoxd3_MA0912.1	15	1	+	9.648307198820193	10.472316335449888	CTTATGTAATTAACTG
chr3	106717524	106717525	chr3:106717525:T:A	rs4452357	T	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr3	106765543	106765544	chr3:106765544:A:C	chr3:106765544:A:C	A	C	A	Hoxd3_MA0912.1	11	1	+	9.62501737457783	2.8803812051655	AAGGTATAATTACCCT
chr3	106765561	106765562	chr3:106765562:C:T	rs11918016	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr3	107118508	107118509	chr3:107118509:T:G	rs34874055	T	G	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	107118529	107118530	chr3:107118530:T:C	rs534323217	T	C	T	Hoxd3_MA0912.1	7	1	-	9.36088175390601	2.5811985112755824	TTGGAGTAATTATTAT
chr3	107273853	107273854	chr3:107273854:T:C	rs3909651	T	C	C	Hoxd3_MA0912.1	7	1	-	8.266992025397094	1.487308782766667	CTGAGATAATGACTTG
chr3	107303669	107303670	chr3:107303670:C:T	rs73194564	C	T	C	Hoxd3_MA0912.1	14	1	-	9.082144233624602	8.138178903860469	TTTAGTTAATTGACGC
chr3	107662351	107662352	chr3:107662352:G:A	rs180982487	G	A	G	Hoxd3_MA0912.1	14	1	-	7.953718036212264	7.389381590079973	TTCATTTCATTACCCG
chr3	107862200	107862201	chr3:107862201:G:A	rs9864366	G	A	G	Hoxd3_MA0912.1	15	1	-	8.014337531236237	8.792042099824245	CAGGTTTAATTGACTC
chr3	107862206	107862207	chr3:107862207:A:G	rs114681176	A	G	A	Hoxd3_MA0912.1	9	1	-	8.014337531236237	1.1257650716708754	CAGGTTTAATTGACTC
chr3	107957099	107957100	chr3:107957100:C:T	rs113209812	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	107978818	107978819	chr3:107978819:A:G	rs709494	A	G	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	108021851	108021852	chr3:108021852:G:A	rs13084719	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr3	108122229	108122230	chr3:108122230:T:C	rs62264095	T	C	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	108125169	108125170	chr3:108125170:T:C	rs11926884	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	108219795	108219796	chr3:108219796:A:G	rs150318939	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	108474674	108474675	chr3:108474675:T:C	rs36099642	T	C	T	Hoxd3_MA0912.1	9	1	+	8.597923720539152	1.7093512609737895	TTGGGCTCATTAGTTT
chr3	108645704	108645705	chr3:108645705:C:T	rs35499052	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr3	108975192	108975193	chr3:108975193:G:A	rs2922138	G	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	109412464	109412465	chr3:109412465:G:A	rs116335334	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	109685883	109685884	chr3:109685884:A:G	rs900930879	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	109705205	109705206	chr3:109705206:G:A	rs7641862	G	A	G	Hoxd3_MA0912.1	15	1	-	9.919007942569491	10.6967125111575	CTGAGTCAATTAAACC
chr3	109928349	109928350	chr3:109928350:T:C	rs12631286	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr3	110259951	110259952	chr3:110259952:G:A	rs7612501	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr3	110886669	110886670	chr3:110886670:A:G	rs560041244	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	111343034	111343035	chr3:111343035:C:T	rs79088243	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	111589886	111589887	chr3:111589887:A:T	rs62275481	A	T	a	Hoxd3_MA0912.1	3	1	+	10.03523540708374	9.47089896095145	ATCAATTAATTAACCT
chr3	111669866	111669867	chr3:111669867:G:A	rs116042416	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	111961456	111961457	chr3:111961457:A:G	rs4682066	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	111961481	111961482	chr3:111961482:G:A	rs4682067	G	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	112101895	112101896	chr3:112101896:T:G	rs340152	T	G	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	112298164	112298165	chr3:112298165:G:A	rs4682397	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	112322534	112322535	chr3:112322535:T:C	rs62278843	T	C	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	112365224	112365225	chr3:112365225:T:A	rs16859507	T	A	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	112748459	112748460	chr3:112748460:A:G	rs1387020	A	G	A	Hoxd3_MA0912.1	13	1	-	8.955044421040887	9.55928114955326	TGGGTTTAATTACTCC
chr3	112751738	112751739	chr3:112751739:C:T	rs820553	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	112752336	112752337	chr3:112752337:C:G	rs820552	C	G	C	Hoxd3_MA0912.1	4	1	-	8.374856073848747	6.796778163135665	TGTGGGTAATTAACAT
chr3	112816788	112816789	chr3:112816789:G:A	rs75472444	G	A	G	Hoxd3_MA0912.1	13	1	-	9.078663942724237	8.474427214211863	ATGATTCAATTACCGC
chr3	112856232	112856233	chr3:112856233:A:G	rs4682120	A	G	C	Hoxd3_MA0912.1	1	1	+	8.350428435260191	7.492604161886001	CAAGATTAATTACCTC
chr3	112992523	112992524	chr3:112992524:G:A	rs1488189	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	113077956	113077957	chr3:113077957:C:T	rs55942049	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	113093013	113093014	chr3:113093014:G:A	rs34958128	G	A	G	Hoxd3_MA0912.1	13	1	-	9.31282958089824	8.708592852385866	CTGGGGCAATTAGCCC
chr3	113232500	113232501	chr3:113232501:A:G	rs6769798	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	114105768	114105769	chr3:114105769:G:A	rs2895418	G	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	114356105	114356106	chr3:114356106:T:C	rs74898984	T	C	T	Hoxd3_MA0912.1	0	1	+	8.35073671982155	8.298231222443619	TTGCAGTAATGAAAGT
chr3	114510467	114510468	chr3:114510468:G:T	rs74816704	G	T	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	114559474	114559475	chr3:114559475:T:G	rs2718417	T	G	G	Hoxd3_MA0912.1	4	1	+	9.684709280626262	10.288946009138636	CAGGTATAATTAATCT
chr3	114577631	114577632	chr3:114577632:T:C	rs143367069	T	C	T	Hoxd3_MA0912.1	8	1	-	8.665802237936415	1.7772297783710516	TTGACCTCATTACTCT
chr3	115705301	115705302	chr3:115705302:G:T	rs824353	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr3	116137282	116137283	chr3:116137283:A:C	rs1882012	A	C	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	116176436	116176437	chr3:116176437:C:T	rs9875465	C	T	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	116689206	116689207	chr3:116689207:A:G	rs7634331	A	G	A	Hoxd3_MA0912.1	0	1	+	9.776770959330324	8.45632316400802	ATGATCTAATTACAAT
chr3	117019388	117019389	chr3:117019389:A:G	rs35888481	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	117019401	117019402	chr3:117019402:T:G	rs139758421	T	G	T	Hoxd3_MA0912.1	11	1	-	9.264868816317925	2.5202326469055967	CTGGGCCAATTAAAGG
chr3	117019424	117019425	chr3:117019425:G:A	chr3:117019425:G:A	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	117102016	117102017	chr3:117102017:G:A	rs75920784	G	A	G	Hoxd3_MA0912.1	5	1	-	7.81576055250209	8.133081994388498	CTGAGCCAATTGCTCC
chr3	117920376	117920377	chr3:117920377:G:T	rs4688071	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	118532060	118532061	chr3:118532061:C:G	rs4585187	C	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	118532063	118532064	chr3:118532064:G:A	rs79789909	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr3	118575677	118575678	chr3:118575678:T:C	rs6791712	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr3	118781349	118781350	chr3:118781350:G:A	rs9855521	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	118860441	118860442	chr3:118860442:A:T	rs1081919	A	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr3	119194829	119194830	chr3:119194830:T:A	rs13320556	T	A	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	119259488	119259489	chr3:119259489:G:A	rs80154137	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr3	119377048	119377049	chr3:119377049:T:C	rs16829773	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr3	119833471	119833472	chr3:119833472:A:C	rs73175830	A	C	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	119841758	119841759	chr3:119841759:T:C	rs6805251	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	119917248	119917249	chr3:119917249:A:C	rs6792572	A	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	120280972	120280973	chr3:120280973:C:T	rs4146299	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr3	120312058	120312059	chr3:120312059:T:C	rs787189	T	C	T	Hoxd3_MA0912.1	15	1	-	7.042786222523084	7.8837848494823	CTGGGGCAATTGCCTA
chr3	120312092	120312093	chr3:120312093:C:G	rs2638592	C	G	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	121380799	121380800	chr3:121380800:A:T	rs77542218	A	T	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr3	121537567	121537568	chr3:121537568:A:G	rs7628081	A	G	G	Hoxd3_MA0912.1	13	1	-	7.975436091241597	8.57967281975397	CTAAGCCAATTAATGC
chr3	121537572	121537573	chr3:121537573:T:C	rs7617748	T	C	T	Hoxd3_MA0912.1	8	1	-	7.975436091241597	1.0868636316762343	CTAAGCCAATTAATGC
chr3	121896831	121896832	chr3:121896832:G:A	rs1344279	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	121896921	121896922	chr3:121896922:G:T	rs1881996	G	T	-	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	122078124	122078125	chr3:122078125:G:A	rs9282645	G	A	G	Hoxd3_MA0912.1	2	1	+	6.780995848995709	5.33116080483867	ATGTGCTAATGGCCGG
chr3	122078136	122078137	chr3:122078137:G:A	rs9282646	G	A	g	Hoxd3_MA0912.1	14	1	+	6.780995848995709	5.8370305192315755	ATGTGCTAATGGCCGG
chr3	122294119	122294120	chr3:122294120:G:C	rs11720638	G	C	G	Hoxd3_MA0912.1	12	1	+	7.950084765590535	8.917606996529566	CTGGTTCAATTAGCCA
chr3	122678216	122678217	chr3:122678217:G:T	rs1355562	G	T	T	Hoxd3_MA0912.1	2	1	+	9.78261859704187	8.465428027491127	CAGTAGTAATTACTGT
chr3	122784320	122784321	chr3:122784321:G:A	rs62261679	G	A	G	Hoxd3_MA0912.1	0	1	-	8.315184504993178	8.36769000237111	CTGAGATAATGAACAG
chr3	122784333	122784334	chr3:122784334:A:T	rs77946779	A	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	123028914	123028915	chr3:123028915:G:C	rs78957109	G	C	G	Hoxd3_MA0912.1	14	1	-	8.781726385103951	8.605311019819503	TTGTTCTAATTATCCA
chr3	123188367	123188368	chr3:123188368:A:C	rs7627445	A	C	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	123563833	123563834	chr3:123563834:C:T	rs2626022	C	T	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	123582790	123582791	chr3:123582791:T:C	rs11918840	T	C	T	Hoxd3_MA0912.1	10	1	+	8.064248511530671	1.2845652689002431	CTGGAACAATTACCCA
chr3	123733660	123733661	chr3:123733661:C:T	rs41302194	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	124410509	124410510	chr3:124410510:T:G	rs9809750	T	G	T	Hoxd3_MA0912.1	3	1	-	12.522538741718577	11.221521073006612	CTGAGTTAATTAACTT
chr3	124552352	124552353	chr3:124552353:C:T	rs4995326	C	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	124573173	124573174	chr3:124573174:T:G	rs2713647	T	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	124685666	124685667	chr3:124685667:A:G	rs2713637	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	125056089	125056090	chr3:125056090:C:T	rs1000300286	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	125056092	125056093	chr3:125056093:C:A	chr3:125056093:C:A	C	A	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	125056121	125056122	chr3:125056122:G:T	rs551779321	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	125121656	125121657	chr3:125121657:A:G	rs570253	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr3	125130028	125130029	chr3:125130029:A:G	rs486178	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	125152128	125152129	chr3:125152129:G:T	rs184876464	G	T	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr3	125211199	125211200	chr3:125211200:A:G	rs673881	A	G	G	Hoxd3_MA0912.1	4	1	-	9.838071619628614	8.864230437427906	TAGATGTAATTAACTC
chr3	125219208	125219209	chr3:125219209:A:G	rs6805932	A	G	A	Hoxd3_MA0912.1	6	1	-	9.76035817365441	7.974432225473418	TTTATATAATTACTCT
chr3	126031578	126031579	chr3:126031579:T:A	rs2333407	T	A	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr3	126201613	126201614	chr3:126201614:A:T	rs72969707	A	T	A	Hoxd3_MA0912.1	8	1	+	7.661610759722354	3.170933572955363	CTGAGGCAATTGCTAT
chr3	126537825	126537826	chr3:126537826:T:G	rs6783962	T	G	G	Hoxd3_MA0912.1	3	1	-	9.083044138270733	7.782026469558768	TTGACGTAATTAGTCC
chr3	126563948	126563949	chr3:126563949:C:T	rs67961034	C	T	C	Hoxd3_MA0912.1	13	1	+	9.599614276567307	8.995377548054933	TTTCTCTAATTACCCT
chr3	126679985	126679986	chr3:126679986:T:C	rs9289282	T	C	T	Hoxd3_MA0912.1	1	1	-	9.19119495903141	8.333370685657219	TAGGGATAATTAAGGT
chr3	126914575	126914576	chr3:126914576:C:G	rs2303994	C	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	126934404	126934405	chr3:126934405:C:T	rs1400123169	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	127139042	127139043	chr3:127139043:A:G	rs552064577	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr3	127157276	127157277	chr3:127157277:C:T	rs75844433	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	127159687	127159688	chr3:127159688:G:A	rs77043207	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	127173332	127173333	chr3:127173333:G:A	rs141604537	G	A	G	Hoxd3_MA0912.1	14	1	-	8.85228633130262	8.28794988517033	ATGTCTTAATTAAACG
chr3	127181648	127181649	chr3:127181649:T:C	rs9827714	T	C	T	Hoxd3_MA0912.1	8	1	-	8.071990403506248	1.1834179439408854	CTCTGGTCATTACCTT
chr3	127762712	127762713	chr3:127762713:G:C	rs75601890	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	127788482	127788483	chr3:127788483:C:T	rs115085301	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	128499082	128499083	chr3:128499083:G:A	rs748793012	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	128880105	128880106	chr3:128880106:G:C	chr3:128880106:G:C	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	129264615	129264616	chr3:129264616:T:C	rs4927939	T	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	129345031	129345032	chr3:129345032:A:G	rs9876096	A	G	A	Hoxd3_MA0912.1	8	1	+	7.796264310023341	0.9076918504579787	CTGGGTCAATTGCTGG
chr3	129345036	129345037	chr3:129345037:T:C	rs9858550	T	C	t	Hoxd3_MA0912.1	13	1	+	7.796264310023341	8.400501038535714	CTGGGTCAATTGCTGG
chr3	129385603	129385604	chr3:129385604:C:A	rs183495124	C	A	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	129623551	129623552	chr3:129623552:C:T	rs55902606	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	129825061	129825062	chr3:129825062:G:A	rs76379997	G	A	g	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	130748175	130748176	chr3:130748176:C:A	chr3:130748176:C:A	C	A	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	130822797	130822798	chr3:130822798:G:A	rs9821080	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	131403264	131403265	chr3:131403265:C:A	rs6769315	C	A	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	131655649	131655650	chr3:131655650:C:T	rs73871342	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	131775514	131775515	chr3:131775515:G:A	rs140970198	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	131904434	131904435	chr3:131904435:G:A	rs9874137	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	131957820	131957821	chr3:131957821:G:A	rs78776550	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	132030182	132030183	chr3:132030183:T:G	rs1534805	T	G	g	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	132288365	132288366	chr3:132288366:G:A	rs11706024	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr3	132343386	132343387	chr3:132343387:A:C	rs974844	A	C	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	132352607	132352608	chr3:132352608:G:T	rs17242113	G	T	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	132405351	132405352	chr3:132405352:C:T	rs76621798	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	132521494	132521495	chr3:132521495:G:A	rs7622472	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	132787862	132787863	chr3:132787863:G:T	rs935899	G	T	T	Hoxd3_MA0912.1	13	1	-	9.19182513723195	8.587588408719576	ATGATCTAATTAGCTC
chr3	132847137	132847138	chr3:132847138:A:G	rs12695581	A	G	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr3	132879369	132879370	chr3:132879370:A:C	rs76482573	A	C	C	Hoxd3_MA0912.1	3	1	+	8.898262927249782	7.597245258537818	CAGAGGTAATTAATTA
chr3	133377123	133377124	chr3:133377124:T:A	rs1708385	T	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	133472608	133472609	chr3:133472609:A:G	rs7628499	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	133563861	133563862	chr3:133563862:T:C	rs1382700	T	C	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	133594810	133594811	chr3:133594811:C:T	rs111847596	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	133944900	133944901	chr3:133944901:A:G	rs77357000	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	133971155	133971156	chr3:133971156:C:T	rs56719814	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	133971193	133971194	chr3:133971194:G:A	rs13319548	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	134340427	134340428	chr3:134340428:C:A	rs4974495	C	A	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	134362895	134362896	chr3:134362896:C:A	rs112028105	C	A	C	Hoxd3_MA0912.1	4	1	-	7.633558790999044	7.02932206248667	TTAGGTTCATTAGCGG
chr3	134372336	134372337	chr3:134372337:T:G	rs3755762	T	G	G	Hoxd3_MA0912.1	11	1	-	7.845642140650584	1.1010059712382552	CAGGTGCAATTACTCC
chr3	134422827	134422828	chr3:134422828:T:C	rs3846053	T	C	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	134870144	134870145	chr3:134870145:G:T	rs139564606	G	T	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr3	135487456	135487457	chr3:135487457:A:C	rs58701539	A	C	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	135487462	135487463	chr3:135487463:C:T	rs58194709	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	135626650	135626651	chr3:135626651:G:A	rs1447598	G	A	G	Hoxd3_MA0912.1	14	1	+	8.386002984640852	7.44203765487672	CTGTTTTAATGAAAGC
chr3	135642009	135642010	chr3:135642010:T:C	rs141117195	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	135679034	135679035	chr3:135679035:C:T	rs1562462	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	136621706	136621707	chr3:136621707:G:C	rs73863636	G	C	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	136929764	136929765	chr3:136929765:T:C	rs1965106	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	136929800	136929801	chr3:136929801:T:A	rs1965107	T	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	137104796	137104797	chr3:137104797:G:C	rs35687749	G	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	137595043	137595044	chr3:137595044:G:T	rs4678357	G	T	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr3	137770158	137770159	chr3:137770159:C:G	rs60964637	C	G	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr3	138025846	138025847	chr3:138025847:G:A	rs11706483	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr3	138036742	138036743	chr3:138036743:T:A	rs77644107	T	A	T	Hoxd3_MA0912.1	8	1	-	8.531155897279952	4.040478710512959	CTGGGCTCATGACCGT
chr3	138440467	138440468	chr3:138440468:C:T	rs79068380	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	138593824	138593825	chr3:138593825:T:G	rs34583117	T	G	T	Hoxd3_MA0912.1	6	1	+	9.346472755811892	2.6018365863995627	ATGGAGTAATTACCTA
chr3	138877084	138877085	chr3:138877085:G:A	rs4894360	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	138939780	138939781	chr3:138939781:G:T	rs181012463	G	T	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	139774680	139774681	chr3:139774681:C:T	rs144799744	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	139775662	139775663	chr3:139775663:A:T	rs11710391	A	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	139999042	139999043	chr3:139999043:C:T	rs9842814	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr3	140021253	140021254	chr3:140021254:G:A	rs9828795	G	A	A	Hoxd3_MA0912.1	2	1	+	8.725423768644749	7.2755887244877115	TTGTGCTCATTAATGC
chr3	140116849	140116850	chr3:140116850:A:G	rs2350497	A	G	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	140761508	140761509	chr3:140761509:A:G	rs73233051	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr3	141203050	141203051	chr3:141203051:G:A	rs9880393	G	A	G	Hoxd3_MA0912.1	2	1	+	7.804302426730861	6.354467382573823	CAGAAGTAATTAGGCC
chr3	141416132	141416133	chr3:141416133:T:C	rs73872719	T	C	T	Hoxd3_MA0912.1	9	1	+	9.021102463077277	2.1325300035119144	CAGAAATAATTAATCC
chr3	141416138	141416139	chr3:141416139:C:G	rs141608486	C	G	C	Hoxd3_MA0912.1	15	1	+	9.021102463077277	8.974797895035591	CAGAAATAATTAATCC
chr3	142003379	142003380	chr3:142003380:A:T	rs112628322	A	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	142723809	142723810	chr3:142723810:C:T	rs1244521947	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	142723817	142723818	chr3:142723818:T:C	rs62278492	T	C	T	Hoxd3_MA0912.1	1	1	+	9.565678007793657	7.481617520257526	TTTGCTTAATTACCTT
chr3	142749205	142749206	chr3:142749206:C:T	rs75236597	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	142913697	142913698	chr3:142913698:G:C	rs73866233	G	C	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr3	143587159	143587160	chr3:143587160:G:C	rs17581622	G	C	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	143977370	143977371	chr3:143977371:G:A	rs28694285	G	A	G	Hoxd3_MA0912.1	2	1	+	8.758907807428185	7.309072763271146	TGGGTTTAATTAAGCT
chr3	144126845	144126846	chr3:144126846:C:T	rs36107535	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	144373077	144373078	chr3:144373078:C:T	rs1102122	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	144635857	144635858	chr3:144635858:C:G	rs1091544	C	G	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	144900566	144900567	chr3:144900567:G:A	rs76158689	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr3	144900598	144900599	chr3:144900599:T:A	rs369685175	T	A	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	144900606	144900607	chr3:144900607:A:C	rs60889886	A	C	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	145035460	145035461	chr3:145035461:C:G	rs7645569	C	G	c	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	145251525	145251526	chr3:145251526:A:T	rs1445369	A	T	N	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	146229535	146229536	chr3:146229536:T:C	rs6770278	T	C	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	146248964	146248965	chr3:146248965:T:C	rs9859273	T	C	T	Hoxd3_MA0912.1	10	1	+	9.106559554904283	2.326876312273856	TTTGGATAATTAGTGT
chr3	146511326	146511327	chr3:146511327:T:C	rs113471420	T	C	T	Hoxd3_MA0912.1	8	1	-	8.946838999517224	2.058266539951862	CAGAGTTAATTAGATC
chr3	146547391	146547392	chr3:146547392:A:G	rs13080178	A	G	A	Hoxd3_MA0912.1	8	1	+	8.02963859063912	1.1410661310737573	CTGTTGCAATGAACCT
chr3	146640353	146640354	chr3:146640354:A:C	rs73159126	A	C	A	Hoxd3_MA0912.1	9	1	-	10.323203542329834	5.832526355562843	TTTGATTAATTACTGT
chr3	148087874	148087875	chr3:148087875:T:C	rs15606	T	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	148187237	148187238	chr3:148187238:T:G	rs188856759	T	G	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr3	148884668	148884669	chr3:148884669:C:T	rs3772578	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr3	149246904	149246905	chr3:149246905:G:A	rs7618020	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr3	149385226	149385227	chr3:149385227:G:A	rs150773532	G	A	G	Hoxd3_MA0912.1	14	1	-	8.422896004908345	7.858559558776054	CAGGCCTAATTACTCG
chr3	149385252	149385253	chr3:149385253:C:A	rs7610135	C	A	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	149829880	149829881	chr3:149829881:G:A	rs141974211	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	149880086	149880087	chr3:149880087:G:A	rs116217107	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	150115928	150115929	chr3:150115929:G:C	rs4681576	G	C	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	150131201	150131202	chr3:150131202:T:A	rs9289803	T	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	150752933	150752934	chr3:150752934:C:G	rs114086903	C	G	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	150908878	150908879	chr3:150908879:G:T	rs2124513	G	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr3	151145726	151145727	chr3:151145727:A:G	rs12489984	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	151639211	151639212	chr3:151639212:G:A	rs1009851117	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr3	151798604	151798605	chr3:151798605:T:C	rs73166965	T	C	-	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	151864889	151864890	chr3:151864890:T:G	chr3:151864890:T:G	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	152243684	152243685	chr3:152243685:C:T	rs990673178	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr3	152332898	152332899	chr3:152332899:T:C	rs146367172	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr3	152470500	152470501	chr3:152470501:A:G	rs4622883	A	G	G	Hoxd3_MA0912.1	15	1	+	8.452306610255647	9.293305237214863	CTGTGCTAATTAGCAA
chr3	152713578	152713579	chr3:152713579:G:T	rs1850424	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	153131701	153131702	chr3:153131702:T:C	rs10935916	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr3	153209074	153209075	chr3:153209075:C:T	rs7611034	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	153314206	153314207	chr3:153314207:G:C	rs9828551	G	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr3	153578613	153578614	chr3:153578614:C:T	rs1907097	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr3	153740244	153740245	chr3:153740245:G:A	rs34259793	G	A	G	Hoxd3_MA0912.1	14	1	-	9.26332339200436	8.698986945872068	TTGTTCTAATTGCTCT
chr3	153878923	153878924	chr3:153878924:C:T	rs56110000	C	T	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	154175562	154175563	chr3:154175563:A:G	rs357474	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	154387663	154387664	chr3:154387664:C:T	rs701114	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr3	154604117	154604118	chr3:154604118:A:G	rs182364844	A	G	A	Hoxd3_MA0912.1	8	1	+	7.775206985515343	0.8866345259499797	CTGGGCCCATTACCAT
chr3	154658724	154658725	chr3:154658725:C:T	rs12493149	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	154886846	154886847	chr3:154886847:T:C	rs73874416	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	154971799	154971800	chr3:154971800:G:A	rs7641860	G	A	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	155080715	155080716	chr3:155080716:G:A	rs183243742	G	A	G	Hoxd3_MA0912.1	13	1	-	7.972025966661439	7.367789238149065	TGGTTGCAATTACCCT
chr3	155323285	155323286	chr3:155323286:G:A	rs1014059444	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	155329541	155329542	chr3:155329542:T:G	rs9829238	T	G	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr3	155500252	155500253	chr3:155500253:T:G	rs12107115	T	G	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	155555565	155555566	chr3:155555566:T:C	rs359553	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	155629736	155629737	chr3:155629737:C:T	rs10212586	C	T	T	Hoxd3_MA0912.1	13	1	-	8.758907807428185	9.732748989628895	TGGGATTAATTACGCT
chr3	155632343	155632344	chr3:155632344:A:C	rs1568360	A	C	A	Hoxd3_MA0912.1	7	1	+	8.783238997842185	6.809296631661665	TTAAGTCAATTACCAT
chr3	155753259	155753260	chr3:155753260:T:C	rs9818179	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	156010984	156010985	chr3:156010985:G:A	rs6805895	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	156812504	156812505	chr3:156812505:T:C	rs62278062	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	157094112	157094113	chr3:157094113:G:A	rs1552193	G	A	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr3	157115394	157115395	chr3:157115395:C:T	rs114884739	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr3	157248503	157248504	chr3:157248504:C:G	rs74319750	C	G	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	157417489	157417490	chr3:157417490:C:T	rs75885334	C	T	C	Hoxd3_MA0912.1	1	1	+	8.739215515195655	10.823276002731786	CCGATCTAATTACCTC
chr3	157417525	157417526	chr3:157417526:A:G	rs73020298	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	157776928	157776929	chr3:157776929:G:C	rs792738	G	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	157921426	157921427	chr3:157921427:C:T	rs115540174	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	158459433	158459434	chr3:158459434:A:G	rs73172115	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	159122904	159122905	chr3:159122905:A:G	rs17782680	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	159439493	159439494	chr3:159439494:T:G	rs114446166	T	G	T	Hoxd3_MA0912.1	14	1	+	8.690742861876394	9.078663942724237	ATGATTCAATTACCTC
chr3	159733166	159733167	chr3:159733167:G:T	rs79466867	G	T	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	159855783	159855784	chr3:159855784:A:G	rs141991033	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	160125520	160125521	chr3:160125521:A:G	rs73171925	A	G	A	Hoxd3_MA0912.1	5	1	+	9.553516230389176	10.2780796071825	TTAGTATAATTAACTT
chr3	160401842	160401843	chr3:160401843:C:G	rs58654032	C	G	C	Hoxd3_MA0912.1	1	1	+	7.691093853222586	7.691093853222586	CCGAACTAATTGCACT
chr3	160436469	160436470	chr3:160436470:A:C	rs1047210	A	C	A	Hoxd3_MA0912.1	3	1	+	9.003991209008392	7.702973540296428	TTGATTTAATTGGCCC
chr3	160618047	160618048	chr3:160618048:A:G	rs2178451	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	160675756	160675757	chr3:160675757:T:A	rs7610939	T	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	160704278	160704279	chr3:160704279:T:C	rs2366967	T	C	T	Hoxd3_MA0912.1	14	1	+	8.601382249128871	9.165718695261162	CTGGAATAATTAGTTC
chr3	160705827	160705828	chr3:160705828:A:G	rs111236765	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	160936592	160936593	chr3:160936593:T:C	rs73158217	T	C	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	160939508	160939509	chr3:160939509:C:T	rs935500	C	T	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	161015717	161015718	chr3:161015718:T:C	rs7628389	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	161266113	161266114	chr3:161266114:A:T	rs758861638	A	T	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	161481335	161481336	chr3:161481336:G:A	rs921364	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	161481358	161481359	chr3:161481359:A:G	rs921363	A	G	G	Hoxd3_MA0912.1	9	1	-	8.821544322567572	1.9329718630022112	CTGATGTAATGACAGC
chr3	161500217	161500218	chr3:161500218:A:G	rs9813997	A	G	A	Hoxd3_MA0912.1	9	1	-	9.028782784688412	2.140210325123049	TTTGAGTAATTACTTC
chr3	161913987	161913988	chr3:161913988:G:T	rs6441413	G	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	161991446	161991447	chr3:161991447:C:T	rs4241433	C	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	162934156	162934157	chr3:162934157:C:T	rs7355808	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	163033745	163033746	chr3:163033746:T:C	rs4450843	T	C	t	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	163033779	163033780	chr3:163033780:T:C	rs4450842	T	C	c	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	163039730	163039731	chr3:163039731:G:A	rs62396444	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr3	163180822	163180823	chr3:163180823:T:C	rs1873643	T	C	C	Hoxd3_MA0912.1	4	1	-	8.425503046106556	9.02973977461893	CTGAAGCAATTACGTT
chr3	163213393	163213394	chr3:163213394:A:G	rs13075580	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr3	163364998	163364999	chr3:163364999:C:A	rs9840829	C	A	C	Hoxd3_MA0912.1	2	1	-	9.874380554069791	8.557189984519047	TTGGGCTAATTACTTA
chr3	163365007	163365008	chr3:163365008:C:T	rs9840841	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr3	163481867	163481868	chr3:163481868:G:A	rs2711784	G	A	G	Hoxd3_MA0912.1	15	1	-	8.690742861876394	9.468447430464403	ATGATTCAATTACCTC
chr3	163481882	163481883	chr3:163481883:T:C	rs150424906	T	C	T	Hoxd3_MA0912.1	0	1	-	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr3	164116337	164116338	chr3:164116338:T:C	rs6548330	T	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr3	164250836	164250837	chr3:164250837:G:A	rs13059129	G	A	G	Hoxd3_MA0912.1	1	1	+	8.37221069486382	9.230034968238012	CGCGGGTAATTAAACT
chr3	164975016	164975017	chr3:164975017:T:C	rs73018856	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	166291835	166291836	chr3:166291836:C:T	rs74340430	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr3	166362053	166362054	chr3:166362054:T:C	rs74588060	T	C	T	Hoxd3_MA0912.1	1	1	+	7.934631512686383	5.850571025150252	GTGAGTCAATTAAACC
chr3	166634486	166634487	chr3:166634487:G:A	rs79383620	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	166836042	166836043	chr3:166836043:G:A	rs1554549	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	167239869	167239870	chr3:167239870:G:T	rs111266377	G	T	G	Hoxd3_MA0912.1	6	1	-	7.934631512686383	5.382866399773334	GTGAGTCAATTAAACC
chr3	167723268	167723269	chr3:167723269:T:C	rs148793086	T	C	T	Hoxd3_MA0912.1	0	1	-	8.789466515437956	7.469018720115654	ATGGGGTAATTGCAGG
chr3	167958488	167958489	chr3:167958489:C:T	rs6444756	C	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr3	168056778	168056779	chr3:168056779:C:A	rs114344664	C	A	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	168141665	168141666	chr3:168141666:A:G	rs11918755	A	G	G	Hoxd3_MA0912.1	1	1	-	7.934631512686383	5.850571025150252	GTGAGTCAATTAAACC
chr3	168250383	168250384	chr3:168250384:A:G	rs190122400	A	G	A	Hoxd3_MA0912.1	9	1	-	8.398271865159542	1.5096994055941793	ATTAGCCAATTACTCT
chr3	169183015	169183016	chr3:169183016:G:A	rs73879027	G	A	G	Hoxd3_MA0912.1	2	1	+	9.018438270431627	7.568603226274588	GCGAGTTAATTAACCT
chr3	169233016	169233017	chr3:169233017:G:A	rs79758749	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	169388812	169388813	chr3:169388813:C:T	rs140023102	C	T	C	Hoxd3_MA0912.1	13	1	+	8.67967457485287	8.075437846340495	TTTTTTTAATGACCCT
chr3	169556993	169556994	chr3:169556994:C:T	rs721806	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	169966238	169966239	chr3:169966239:G:A	rs74394025	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr3	169966245	169966246	chr3:169966246:A:G	rs531968921	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	170006192	170006193	chr3:170006193:T:C	rs2421900	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	170125379	170125380	chr3:170125380:T:C	rs73181215	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	170349260	170349261	chr3:170349261:C:G	rs9841852	C	G	C	Hoxd3_MA0912.1	0	1	+	9.50293321372385	7.518556783840741	CTGGGTTAATTAGAAC
chr3	170349271	170349272	chr3:170349272:A:G	rs59152719	A	G	A	Hoxd3_MA0912.1	11	1	+	9.50293321372385	7.717007265542857	CTGGGTTAATTAGAAC
chr3	170599282	170599283	chr3:170599283:G:A	rs75971282	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr3	170803216	170803217	chr3:170803217:T:C	rs9860918	T	C	C	Hoxd3_MA0912.1	9	1	+	9.595792130702792	2.7072196711374295	CTGAGGTAATGAACTG
chr3	170803220	170803221	chr3:170803221:C:T	rs9840899	C	T	T	Hoxd3_MA0912.1	13	1	+	9.595792130702792	8.991555402190418	CTGAGGTAATGAACTG
chr3	170810672	170810673	chr3:170810673:A:T	rs61790474	A	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	171137679	171137680	chr3:171137680:T:C	rs67154420	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	171584684	171584685	chr3:171584685:C:T	rs396645	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	172036868	172036869	chr3:172036869:A:T	rs13089431	A	T	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	172039305	172039306	chr3:172039306:A:G	rs149816562	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	172103099	172103100	chr3:172103100:C:T	rs62283811	C	T	C	Hoxd3_MA0912.1	5	1	-	8.488758191181365	7.764194814388041	CAGACGTAATTAACCA
chr3	172261041	172261042	chr3:172261042:A:G	rs9876039	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	172320668	172320669	chr3:172320669:A:C	rs79630218	A	C	A	Hoxd3_MA0912.1	15	1	-	9.05755378760711	8.233544650977416	CATTTCTAATTACCCT
chr3	172465418	172465419	chr3:172465419:G:A	rs147210356	G	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	172682164	172682165	chr3:172682165:C:T	rs4894576	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr3	172824482	172824483	chr3:172824483:A:G	rs12630930	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	172849321	172849322	chr3:172849322:A:G	rs79520329	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	173287527	173287528	chr3:173287528:G:A	rs147227113	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	173592562	173592563	chr3:173592563:G:A	rs17178976	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	173745425	173745426	chr3:173745426:A:G	rs76868467	A	G	A	Hoxd3_MA0912.1	15	1	-	9.48721689260195	8.709512324013941	ATAAGCTAATTAATTT
chr3	174220799	174220800	chr3:174220800:G:A	rs11713340	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr3	174538941	174538942	chr3:174538942:T:C	rs6791918	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	174538952	174538953	chr3:174538953:C:T	rs6776623	C	T	C	Hoxd3_MA0912.1	7	1	+	8.195740313810038	3.389999437360129	TTGGGCTCATGACCTT
chr3	174776330	174776331	chr3:174776331:A:C	chr3:174776331:A:C	A	C	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	174782869	174782870	chr3:174782870:C:A	rs494601	C	A	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	175007242	175007243	chr3:175007243:T:C	rs9846410	T	C	C	Hoxd3_MA0912.1	9	1	+	10.239894475552283	3.35132201598692	TTGGGTTAATTAACAA
chr3	175095739	175095740	chr3:175095740:G:A	rs60464476	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	175095907	175095908	chr3:175095908:C:T	rs114593803	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr3	175095921	175095922	chr3:175095922:T:A	rs145042617	T	A	T	Hoxd3_MA0912.1	8	1	-	11.26711041216345	6.776433225396458	CTGGGCTAATTAACTG
chr3	175484682	175484683	chr3:175484683:C:T	rs369518426	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr3	175490878	175490879	chr3:175490879:C:A	chr3:175490879:C:A	C	A	C	Hoxd3_MA0912.1	15	1	+	9.263703524658016	8.376400329657114	CTGGGTTAATTATTAC
chr3	176741845	176741846	chr3:176741846:C:T	rs9856005	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	177206702	177206703	chr3:177206703:A:G	rs75207153	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	177555097	177555098	chr3:177555098:A:G	rs9810932	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr3	177792692	177792693	chr3:177792693:C:T	rs34746154	C	T	C	Hoxd3_MA0912.1	14	1	+	9.067203674793605	8.502867228661314	TAGTGATAATTACACG
chr3	177976007	177976008	chr3:177976008:A:G	rs1421157	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	178236846	178236847	chr3:178236847:T:C	rs111408334	T	C	T	Hoxd3_MA0912.1	2	1	-	9.468042467135021	10.91787751129206	CTATGTTAATTAATGG
chr3	178275017	178275018	chr3:178275018:G:A	rs73044548	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr3	178276943	178276944	chr3:178276944:A:C	rs9816659	A	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	178383061	178383062	chr3:178383062:A:G	rs73884387	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	178658470	178658471	chr3:178658471:G:A	rs7652997	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr3	178668606	178668607	chr3:178668607:G:A	rs12497475	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr3	178671504	178671505	chr3:178671505:A:C	rs75536125	A	C	A	Hoxd3_MA0912.1	9	1	-	8.68781537722005	4.197138190453058	CTGAGATAATGAGTCT
chr3	178671532	178671533	chr3:178671533:G:A	rs4488810	G	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	178846065	178846066	chr3:178846066:C:T	rs150405006	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	179978930	179978931	chr3:179978931:A:G	rs4855131	A	G	G	Hoxd3_MA0912.1	1	1	-	10.005197575391245	7.921137087855115	ATGTGGTAATTAATAT
chr3	181724285	181724286	chr3:181724286:A:T	rs73047525	A	T	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr3	181851293	181851294	chr3:181851294:C:T	chr3:181851294:C:T	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	182052686	182052687	chr3:182052687:C:A	rs6773516	C	A	A	Hoxd3_MA0912.1	6	1	+	7.608260737986926	5.056495625073879	TAGAGGCAATTGCACT
chr3	182376158	182376159	chr3:182376159:C:T	rs72622599	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr3	182490796	182490797	chr3:182490797:T:C	rs6800355	T	C	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	182490805	182490806	chr3:182490806:G:A	rs9845298	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	183161049	183161050	chr3:183161050:T:C	rs1464574	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr3	183180655	183180656	chr3:183180656:T:A	rs73058068	T	A	T	Hoxd3_MA0912.1	4	1	-	9.43536758163738	9.43536758163738	ATGGATTAATTAATCA
chr3	183264562	183264563	chr3:183264563:T:C	rs141419588	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr3	183266357	183266358	chr3:183266358:T:C	rs79049130	T	C	t	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr3	183278500	183278501	chr3:183278501:T:C	rs1464578	T	C	T	Hoxd3_MA0912.1	13	1	+	9.715500522681051	10.319737251193425	TTGAACTAATTAATAC
chr3	183703360	183703361	chr3:183703361:G:A	rs7619431	G	A	G	Hoxd3_MA0912.1	0	1	-	8.944393607157892	8.996899104535823	CTATGCTAATTATTCT
chr3	183725685	183725686	chr3:183725686:C:G	rs262975	C	G	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr3	183826472	183826473	chr3:183826473:C:T	rs142896463	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr3	184025389	184025390	chr3:184025390:G:A	rs112452121	G	A	g	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr3	184025566	184025567	chr3:184025567:C:T	rs113876888	C	T	c	Hoxd3_MA0912.1	15	1	+	8.690742861876394	9.468447430464403	ATGATTCAATTACCTC
chr3	184129210	184129211	chr3:184129211:T:C	rs73044228	T	C	t	Hoxd3_MA0912.1	27	0	-	0	0	.
chr3	184129239	184129240	chr3:184129240:G:C	chr3:184129240:G:C	G	C	g	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	184129239	184129240	chr3:184129240:G:T	rs183256151	G	T	g	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	184135268	184135269	chr3:184135269:C:T	rs182550783	C	T	c	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	184135282	184135283	chr3:184135283:C:G	rs146922950	C	G	c	Hoxd3_MA0912.1	0	1	+	8.119203421548745	6.134826991665638	CTTCGTTAATTAGTCC
chr3	184135286	184135287	chr3:184135287:G:A	rs137921645	G	A	g	Hoxd3_MA0912.1	13	1	-	9.545867502978897	8.941630774466523	ATGGACTAATTAACGA
chr3	184135286	184135287	chr3:184135287:G:T	chr3:184135287:G:T	G	T	g	Hoxd3_MA0912.1	13	1	-	9.545867502978897	8.941630774466523	ATGGACTAATTAACGA
chr3	184135310	184135311	chr3:184135311:G:A	chr3:184135311:G:A	G	A	g	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	184250198	184250199	chr3:184250199:A:T	rs9843277	A	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr3	184276747	184276748	chr3:184276748:A:G	rs843371	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	184494902	184494903	chr3:184494903:G:T	rs9823703	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr3	184562921	184562922	chr3:184562922:G:C	rs12490206	G	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	184600975	184600976	chr3:184600976:T:C	rs76131432	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr3	184717742	184717743	chr3:184717743:A:G	rs151303785	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr3	184786454	184786455	chr3:184786455:A:G	rs150838373	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	185025626	185025627	chr3:185025627:T:C	rs62289502	T	C	T	Hoxd3_MA0912.1	1	1	+	8.417559671486964	6.333499183950833	CTGAGGCAATGACTGT
chr3	186099347	186099348	chr3:186099348:A:T	rs75369801	A	T	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr3	186165492	186165493	chr3:186165493:A:C	rs62288978	A	C	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr3	186236722	186236723	chr3:186236723:A:G	rs9864614	A	G	A	Hoxd3_MA0912.1	9	1	-	8.789638865184042	1.9010664056186786	CTTGACTAATTAACAG
chr3	186272602	186272603	chr3:186272603:G:A	rs1468945	G	A	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	186321317	186321318	chr3:186321318:T:C	rs7644189	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	186787997	186787998	chr3:186787998:G:C	rs113874571	G	C	.	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	186933916	186933917	chr3:186933917:A:G	rs34180584	A	G	G	Hoxd3_MA0912.1	9	1	-	8.617117811996666	1.7285453524313033	CAGAGATAATTGCACT
chr3	187450537	187450538	chr3:187450538:G:C	rs11925063	G	C	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr3	187889715	187889716	chr3:187889716:C:T	rs9808926	C	T	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr3	187933118	187933119	chr3:187933119:C:T	rs542887	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	188037090	188037091	chr3:188037091:G:T	rs11921892	G	T	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	188037095	188037096	chr3:188037096:C:T	rs11921831	C	T	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	188037126	188037127	chr3:188037127:A:T	rs67305408	A	T	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	188129685	188129686	chr3:188129686:G:A	rs115770757	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	188204789	188204790	chr3:188204790:C:T	rs17665246	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	188247126	188247127	chr3:188247127:T:C	rs1062148	T	C	T	Hoxd3_MA0912.1	11	1	-	8.127741962473188	6.341816014292194	AAGAGCTCATTACCCC
chr3	188438281	188438282	chr3:188438282:G:A	rs73888481	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	188530271	188530272	chr3:188530272:A:G	rs34126324	A	G	G	Hoxd3_MA0912.1	4	1	+	9.149735556646645	9.75397228515902	TTGGAGTAATGACTTT
chr3	188631759	188631760	chr3:188631760:C:T	rs561137896	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	188690270	188690271	chr3:188690271:G:A	rs113070791	G	A	G	Hoxd3_MA0912.1	13	1	+	7.744282250663035	8.718123432863745	CAGTGTTCATTACGCT
chr3	188965242	188965243	chr3:188965243:A:G	rs848968	A	G	A	Hoxd3_MA0912.1	4	1	-	10.971580237020719	9.997739054820011	ATGGTGTAATTAAACT
chr3	189238090	189238091	chr3:189238091:A:G	rs77131167	A	G	A	Hoxd3_MA0912.1	9	1	-	9.72919028021847	2.840617820653107	CTGAATTAATTGGCCT
chr3	189238110	189238111	chr3:189238111:T:C	rs7627269	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr3	189512414	189512415	chr3:189512415:A:G	rs1364593	A	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr3	189622800	189622801	chr3:189622801:C:G	rs1881990	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	189835497	189835498	chr3:189835498:C:T	rs17447607	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	189861721	189861722	chr3:189861722:G:A	rs17448036	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr3	189937618	189937619	chr3:189937619:T:C	rs185153187	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr3	189937647	189937648	chr3:189937648:C:G	rs147908560	C	G	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr3	189941344	189941345	chr3:189941345:G:A	rs149842890	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr3	189941391	189941392	chr3:189941392:T:C	rs698109	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr3	190596480	190596481	chr3:190596481:C:T	rs6444437	C	T	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr3	190672079	190672080	chr3:190672080:A:G	rs4365668	A	G	G	Hoxd3_MA0912.1	12	1	-	8.881112041649885	10.08786396165475	TGGGGATAATTATCCT
chr3	191239017	191239018	chr3:191239018:A:G	rs9869038	A	G	A	Hoxd3_MA0912.1	6	1	-	7.390380693013654	5.60445474483266	CTTGGCTCATGAACCT
chr3	191366615	191366616	chr3:191366616:T:A	rs9290986	T	A	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	192423207	192423208	chr3:192423208:T:C	rs58175598	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	192645549	192645550	chr3:192645550:C:T	rs4592975	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	192877000	192877001	chr3:192877001:C:T	rs9844309	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	192877010	192877011	chr3:192877011:C:G	rs2367128	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr3	192930344	192930345	chr3:192930345:C:T	chr3:192930345:C:T	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr3	193231293	193231294	chr3:193231294:C:T	rs11924860	C	T	C	Hoxd3_MA0912.1	14	1	-	7.9844698640472895	7.040504534283155	CTCTTTTAATGACCGT
chr3	193323960	193323961	chr3:193323961:G:A	rs750907	G	A	A	Hoxd3_MA0912.1	14	1	-	8.403366891316631	7.839030445184341	GTTAGTTAATTACACC
chr3	193323966	193323967	chr3:193323967:T:A	rs61476114	T	A	T	Hoxd3_MA0912.1	8	1	-	8.403366891316631	3.9126897045496385	GTTAGTTAATTACACC
chr3	193345116	193345117	chr3:193345117:G:A	rs6444706	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	193511078	193511079	chr3:193511079:C:T	rs9283663	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr3	193894370	193894371	chr3:193894371:T:C	rs62286521	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr3	193894375	193894376	chr3:193894376:G:A	rs62286522	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	193972038	193972039	chr3:193972039:G:A	rs927918488	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr3	194069571	194069572	chr3:194069572:T:A	rs78601069	T	A	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr3	194142730	194142731	chr3:194142731:T:C	rs34967245	T	C	T	Hoxd3_MA0912.1	14	1	-	7.905193091722255	8.849158421486388	CTGGTGCAATTACAAG
chr3	194212922	194212923	chr3:194212923:G:A	rs9842495	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr3	194261572	194261573	chr3:194261573:C:A	rs73075694	C	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr3	194594941	194594942	chr3:194594942:T:G	rs1773178	T	G	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr3	194594965	194594966	chr3:194594966:C:A	rs1706000	C	A	C	Hoxd3_MA0912.1	2	1	-	9.428368337491543	8.111177767940799	TTGGGTTAATTGTACT
chr3	194618063	194618064	chr3:194618064:C:T	rs7621137	C	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr3	194640805	194640806	chr3:194640806:G:A	rs141028878	G	A	G	Hoxd3_MA0912.1	15	1	-	7.617310070799974	8.395014639387982	GTGAGCCAATTAAACC
chr3	194640826	194640827	chr3:194640827:T:A	rs9258	T	A	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr3	194675907	194675908	chr3:194675908:C:A	rs61111843	C	A	C	Hoxd3_MA0912.1	13	1	-	9.118634600444418	10.092475782645126	CTGATTCAATTACGCT
chr3	194787892	194787893	chr3:194787893:G:A	rs78095881	G	A	G	Hoxd3_MA0912.1	14	1	-	8.439824171055974	7.875487724923683	TTGTTGTCATTAATCG
chr3	194801251	194801252	chr3:194801252:A:G	rs9874101	A	G	A	Hoxd3_MA0912.1	1	1	+	8.279849219019102	7.42202494564491	CATTGCTAATTACACC
chr3	194815046	194815047	chr3:194815047:C:G	rs537113598	C	G	C	Hoxd3_MA0912.1	6	1	+	8.181634736591871	3.2229245153605364	TTCTGTCAATTACCCG
chr3	194870939	194870940	chr3:194870940:C:T	rs1864914	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr3	194942273	194942274	chr3:194942274:A:G	rs4467383	A	G	G	Hoxd3_MA0912.1	5	1	-	10.542561645442065	10.225240203555655	TTGATTTAATTACATG
chr3	194942281	194942282	chr3:194942282:A:C	rs62291479	A	C	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	195002394	195002395	chr3:195002395:T:C	rs6808399	T	C	T	Hoxd3_MA0912.1	12	1	-	10.193684589645247	9.226162358706217	CTGTTTTAATTAATAT
chr3	195017493	195017494	chr3:195017494:T:A	rs2676918	T	A	T	Hoxd3_MA0912.1	8	1	-	7.325307545171121	2.8346303584041292	TTGGGGTAATTGTGGG
chr3	195455798	195455799	chr3:195455799:C:T	rs115240161	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr3	195455799	195455800	chr3:195455800:A:G	rs76717993	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr3	195710349	195710350	chr3:195710350:G:A	rs2688489	G	A	G	Hoxd3_MA0912.1	13	1	+	8.60249063390821	9.576331816108919	CTGAGTTAATTGAGAT
chr3	195735028	195735029	chr3:195735029:T:C	rs11925686	T	C	N	Hoxd3_MA0912.1	1	1	-	7.616693136727726	6.758868863353534	CAGTGCTCATTAACTG
chr3	196057320	196057321	chr3:196057321:G:A	rs492349	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr3	196057338	196057339	chr3:196057339:C:T	rs492288	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr3	196058125	196058126	chr3:196058126:G:A	rs3933	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr3	196163726	196163727	chr3:196163727:G:A	rs62410503	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr3	196941644	196941645	chr3:196941645:G:A	rs527514792	G	A	g	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr3	197181941	197181942	chr3:197181942:G:A	rs4916463	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr3	197227824	197227825	chr3:197227825:T:C	rs79678298	T	C	t	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr3	197308113	197308114	chr3:197308114:A:C	rs6764023	A	C	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr3	197317891	197317892	chr3:197317892:G:T	rs553499147	G	T	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr3	197371935	197371936	chr3:197371936:T:A	rs114492746	T	A	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr3	197434960	197434961	chr3:197434961:T:G	rs9818851	T	G	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr3	197434977	197434978	chr3:197434978:C:A	rs6788537	C	A	A	Hoxd3_MA0912.1	3	1	+	6.922410249706431	8.223427918418393	CTGCGCTCATTAGTGG
chr3	197573976	197573977	chr3:197573977:C:T	rs7628668	C	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	1012279	1012280	chr4:1012280:A:G	rs774046429	A	G	A	Hoxd3_MA0912.1	10	1	-	8.46654530004687	1.6868620574164426	TTACACTAATTACCGG
chr4	1163632	1163633	chr4:1163633:C:G	rs59465697	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr4	1405321	1405322	chr4:1405322:A:G	chr4:1405322:A:G	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	1505158	1505159	chr4:1505159:C:T	rs111221574	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	1770369	1770370	chr4:1770370:C:T	rs541424000	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	1784063	1784064	chr4:1784064:A:G	rs61407096	A	G	A	Hoxd3_MA0912.1	9	1	-	6.904731839059679	0.016159379494316006	TGGGGCTCATTAGCCC
chr4	1979432	1979433	chr4:1979433:G:A	rs112146288	G	A	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr4	2172279	2172280	chr4:2172280:C:A	rs409246	C	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	2172288	2172289	chr4:2172289:T:C	rs73199226	T	C	T	Hoxd3_MA0912.1	8	1	-	7.9057287227326025	1.0171562631672404	TTGTGGTCATTGCAGT
chr4	2286898	2286899	chr4:2286899:T:G	rs11723429	T	G	G	Hoxd3_MA0912.1	5	1	+	9.113987888331181	8.98519278012561	CAGATTTAATTAAGTT
chr4	2431471	2431472	chr4:2431472:A:C	rs1203771	A	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr4	2450359	2450360	chr4:2450360:C:T	rs1203808	C	T	G	Hoxd3_MA0912.1	5	1	-	8.277386910487113	7.55282353369379	CTGTCGTCATTACCTT
chr4	2519006	2519007	chr4:2519007:T:C	rs74545621	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	2534548	2534549	chr4:2534549:T:A	rs61790192	T	A	t	Hoxd3_MA0912.1	1	1	+	6.419581966260645	5.193345752098705	CTGACCTCATGACCCG
chr4	2534565	2534566	chr4:2534566:C:A	rs6605378	C	A	c	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	2553805	2553806	chr4:2553806:G:A	rs867950271	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr4	2571282	2571283	chr4:2571283:A:G	rs7676375	A	G	G	Hoxd3_MA0912.1	0	1	+	8.83285239014489	7.512404594822586	ATGGATTAATTATCCA
chr4	2886713	2886714	chr4:2886714:A:G	rs3775068	A	G	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	2924815	2924816	chr4:2924816:T:G	rs116453663	T	G	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr4	2954030	2954031	chr4:2954031:C:T	rs116714359	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr4	3294435	3294436	chr4:3294436:T:G	rs149955003	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	3294450	3294451	chr4:3294451:A:G	rs35825779	A	G	A	Hoxd3_MA0912.1	15	1	-	8.714681133894024	7.936976565306016	CTGTGACAATTACTTT
chr4	3432608	3432609	chr4:3432609:G:T	rs4690096	G	T	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	3741090	3741091	chr4:3741091:G:T	rs2748751	G	T	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	3824109	3824110	chr4:3824110:A:T	rs78580531	A	T	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	3824120	3824121	chr4:3824121:G:C	rs28406844	G	C	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr4	3837729	3837730	chr4:3837730:G:A	rs4075005	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	3840579	3840580	chr4:3840580:T:G	rs55950305	T	G	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr4	3862983	3862984	chr4:3862984:A:G	rs73091106	A	G	A	Hoxd3_MA0912.1	1	1	-	8.472615669806025	6.388555182269896	CTGGACTCATTAAAGG
chr4	3899282	3899283	chr4:3899283:G:C	rs28617372	G	C	-	Hoxd3_MA0912.1	5	1	+	7.218058659574872	7.029532325894035	CTAGGGCAATTGCACT
chr4	4046112	4046113	chr4:4046113:T:C	rs139712110	T	C	-	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	4329492	4329493	chr4:4329493:G:A	rs117602290	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	4659997	4659998	chr4:4659998:C:G	rs35964760	C	G	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr4	4678153	4678154	chr4:4678154:T:A	rs6446676	T	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	4928778	4928779	chr4:4928779:T:C	rs10012063	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	5024195	5024196	chr4:5024196:G:C	rs10937616	G	C	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	5156708	5156709	chr4:5156709:G:A	rs1542203	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	5686371	5686372	chr4:5686372:A:T	rs10428288	A	T	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	5917913	5917914	chr4:5917914:G:A	rs115231197	G	A	G	Hoxd3_MA0912.1	14	1	-	7.205119538328113	6.640783092195822	CTGTGCCAATTGCACG
chr4	5917942	5917943	chr4:5917943:C:G	rs12499301	C	G	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	5962866	5962867	chr4:5962867:C:T	rs7681172	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	5965878	5965879	chr4:5965879:A:T	rs67073028	A	T	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	5967507	5967508	chr4:5967508:A:G	rs7690750	A	G	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr4	5967524	5967525	chr4:5967525:A:G	rs7690889	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	5991259	5991260	chr4:5991260:T:C	rs143669729	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr4	5991302	5991303	chr4:5991303:G:A	rs57252417	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	6057004	6057005	chr4:6057005:C:T	rs7438838	C	T	A	Hoxd3_MA0912.1	15	1	-	8.39580172532146	7.554803098362244	TTCTGTTAATTAGACG
chr4	6088104	6088105	chr4:6088105:C:T	rs75250628	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr4	6110182	6110183	chr4:6110183:G:C	rs142361676	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	6110184	6110185	chr4:6110185:T:C	rs1209057839	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	6110186	6110187	chr4:6110187:G:C	rs35205417	G	C	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	6178357	6178358	chr4:6178358:C:T	rs9992019	C	T	c	Hoxd3_MA0912.1	22	0	-	0	0	.
chr4	6202297	6202298	chr4:6202298:G:C	rs115563397	G	C	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr4	6403098	6403099	chr4:6403099:G:A	rs13113183	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	6410327	6410328	chr4:6410328:C:T	rs116027540	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	6670786	6670787	chr4:6670787:G:A	rs1054909	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	6772780	6772781	chr4:6772781:A:G	chr4:6772781:A:G	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr4	6792624	6792625	chr4:6792625:C:A	rs77166807	C	A	c	Hoxd3_MA0912.1	2	1	-	8.299327537964606	6.982136968413864	ATGATGCAATTACAGG
chr4	6964563	6964564	chr4:6964564:G:A	rs73200002	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	7111458	7111459	chr4:7111459:A:C	rs28491670	A	C	C	Hoxd3_MA0912.1	6	1	-	10.184699245981971	3.440063076569643	ATGAAATAATTAAAGT
chr4	7169506	7169507	chr4:7169507:C:T	rs544561330	C	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	7302618	7302619	chr4:7302619:A:G	rs4689685	A	G	A	Hoxd3_MA0912.1	9	1	-	7.513494624102911	0.6249221645375496	CTGTGGTCATTGCCAT
chr4	7399093	7399094	chr4:7399094:A:G	rs12501740	A	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	7432879	7432880	chr4:7432880:C:A	rs10014338	C	A	C	Hoxd3_MA0912.1	12	1	+	9.093972864742033	9.093972864742033	AAGAGGTAATGACCCT
chr4	7566073	7566074	chr4:7566074:C:T	rs28703787	C	T	-	Hoxd3_MA0912.1	14	1	-	7.940744614541634	6.996779284777499	CTGTCATCATTACCGT
chr4	7592329	7592330	chr4:7592330:C:A	rs11728631	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	7592365	7592366	chr4:7592366:G:T	rs114658973	G	T	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr4	7705070	7705071	chr4:7705071:T:C	rs6446613	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	7705077	7705078	chr4:7705078:G:A	rs6849439	G	A	G	Hoxd3_MA0912.1	12	1	-	10.278631848832028	9.071879928827164	TTGGCTTAATTACATT
chr4	7705117	7705118	chr4:7705118:T:C	rs6446614	T	C	C	Hoxd3_MA0912.1	1	1	+	7.624796609293751	5.540736121757622	CTGATCCAATGACTGT
chr4	7705119	7705120	chr4:7705120:A:G	rs6827478	A	G	A	Hoxd3_MA0912.1	3	1	+	7.624796609293751	7.510698858254729	CTGATCCAATGACTGT
chr4	7750363	7750364	chr4:7750364:A:C	rs17466832	A	C	A	Hoxd3_MA0912.1	11	1	+	9.633019513200786	2.888383343788457	TTTGGGTAATTACATC
chr4	7753977	7753978	chr4:7753978:T:C	rs146714081	T	C	T	Hoxd3_MA0912.1	8	1	-	9.468447430464403	2.579874970899041	ATGATTCAATTACCTT
chr4	7852318	7852319	chr4:7852319:G:A	rs73088575	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	7852342	7852343	chr4:7852343:T:G	rs28735181	T	G	T	Hoxd3_MA0912.1	10	1	+	9.126432979045772	7.152490612865252	ATGGTTTCATTAAACT
chr4	7934877	7934878	chr4:7934878:C:T	rs7689238	C	T	C	Hoxd3_MA0912.1	10	1	-	8.935320256594776	4.129579380144868	ATGAAGTAATGAATGT
chr4	7938242	7938243	chr4:7938243:A:G	rs6846757	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	7956237	7956238	chr4:7956238:G:C	rs6817413	G	C	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr4	7978570	7978571	chr4:7978571:C:A	rs1317285	C	A	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr4	8340254	8340255	chr4:8340255:C:T	rs827020	C	T	T	Hoxd3_MA0912.1	12	1	+	8.419501286292697	7.212749366287833	CTCAGCTAATTGCTGT
chr4	8372165	8372166	chr4:8372166:C:T	rs747581	C	T	C	Hoxd3_MA0912.1	12	1	+	7.257693172766563	6.050941252761699	ATGGTGCAATTACGGC
chr4	8572189	8572190	chr4:8572190:C:T	rs6823859	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	8764507	8764508	chr4:8764508:C:T	rs36167205	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr4	8887220	8887221	chr4:8887221:A:G	rs149900220	A	G	g	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	9737224	9737225	chr4:9737225:T:G	rs115170452	T	G	t	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	9962945	9962946	chr4:9962946:C:T	rs10018204	C	T	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	10007526	10007527	chr4:10007527:T:A	rs6449217	T	A	A	Hoxd3_MA0912.1	4	1	-	9.052406800035685	9.052406800035685	TTCAACTAATTAAACC
chr4	10051806	10051807	chr4:10051807:C:T	rs35501905	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	10371341	10371342	chr4:10371342:C:T	rs6851536	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	10491262	10491263	chr4:10491263:C:G	rs9291420	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	10549875	10549876	chr4:10549876:C:T	rs10938845	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	10572431	10572432	chr4:10572432:A:G	rs17383040	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	10773133	10773134	chr4:10773134:T:A	rs61794350	T	A	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	10930484	10930485	chr4:10930485:A:G	rs16875615	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	11081005	11081006	chr4:11081006:G:T	rs67661899	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	11367393	11367394	chr4:11367394:T:C	rs140210776	T	C	T	Hoxd3_MA0912.1	5	1	-	8.245199490218916	8.96976286701224	GAGAGATAATTACCCC
chr4	11369144	11369145	chr4:11369145:C:T	rs562188591	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr4	11426697	11426698	chr4:11426698:A:T	rs35790387	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	11496074	11496075	chr4:11496075:A:G	rs116041144	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	11533010	11533011	chr4:11533011:G:A	rs10029570	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr4	11533054	11533055	chr4:11533055:C:T	rs560752560	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr4	11634493	11634494	chr4:11634494:A:G	rs12503965	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	11634538	11634539	chr4:11634539:T:C	rs10488988	T	C	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr4	11768834	11768835	chr4:11768835:C:G	rs1021426	C	G	C	Hoxd3_MA0912.1	5	1	+	9.25867667989112	9.447203013571958	TAGTACTAATTACATT
chr4	11903738	11903739	chr4:11903739:A:G	rs6820024	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr4	12667855	12667856	chr4:12667856:C:G	rs35921562	C	G	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	12724794	12724795	chr4:12724795:G:A	rs1520287	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	12854725	12854726	chr4:12854726:G:C	rs2540847	G	C	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	13102580	13102581	chr4:13102581:C:T	rs75012794	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	13176866	13176867	chr4:13176867:G:A	rs57441178	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	13657818	13657819	chr4:13657819:G:C	rs6811186	G	C	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	13866504	13866505	chr4:13866505:C:T	rs2192555	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr4	14367451	14367452	chr4:14367452:C:T	rs6449020	C	T	C	Hoxd3_MA0912.1	15	1	-	8.329145718479458	7.488147091520242	CAGATCCAATTAACCG
chr4	14367483	14367484	chr4:14367484:A:G	rs75213484	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr4	14417069	14417070	chr4:14417070:A:C	rs11931222	A	C	A	Hoxd3_MA0912.1	9	1	-	9.04212326369606	4.551446076929069	GTGGATTAATTACCTC
chr4	14696304	14696305	chr4:14696305:T:C	rs146266521	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	14836092	14836093	chr4:14836093:T:C	rs10939596	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	14879691	14879692	chr4:14879692:G:A	rs9991453	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr4	14879735	14879736	chr4:14879736:G:C	rs9991540	G	C	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	15148204	15148205	chr4:15148205:G:A	rs146233459	G	A	g	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	15182923	15182924	chr4:15182924:G:C	rs897347	G	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	15291398	15291399	chr4:15291399:A:T	rs35603041	A	T	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr4	15740968	15740969	chr4:15740969:G:C	rs1807250	G	C	C	Hoxd3_MA0912.1	15	1	+	7.741837799834827	7.788142367876514	CAGGGTTCATTATCCG
chr4	15744292	15744293	chr4:15744293:A:G	rs35997976	A	G	.	Hoxd3_MA0912.1	5	1	-	9.919007942569491	9.601686500683083	CTGAGTCAATTAAACC
chr4	15787693	15787694	chr4:15787694:C:T	rs3775955	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	15787856	15787857	chr4:15787857:G:A	rs7700059	G	A	g	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	15805932	15805933	chr4:15805933:C:T	rs16892415	C	T	C	Hoxd3_MA0912.1	0	1	+	8.70585006840073	8.758355565778661	CGAGTGTAATTACCCT
chr4	15934257	15934258	chr4:15934258:C:A	rs55803480	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	15953878	15953879	chr4:15953879:A:G	rs56214703	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr4	15953929	15953930	chr4:15953930:T:C	rs28794792	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	15968314	15968315	chr4:15968315:T:C	rs3130	T	C	T	Hoxd3_MA0912.1	11	1	-	9.263833307685669	7.477907359504677	TTGATGTAATGAAATT
chr4	16005334	16005335	chr4:16005335:G:A	chr4:16005335:G:A	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	16253942	16253943	chr4:16253943:A:C	rs203446	A	C	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	16283265	16283266	chr4:16283266:C:T	rs112411206	C	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	16503502	16503503	chr4:16503503:C:T	rs111938060	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	16525149	16525150	chr4:16525150:G:A	rs74607626	G	A	G	Hoxd3_MA0912.1	15	1	+	6.804732628416262	5.963734001457046	CTGGGATAAGTACCCG
chr4	16588599	16588600	chr4:16588600:G:C	rs906122	G	C	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	16597571	16597572	chr4:16597572:C:T	rs1845916	C	T	T	Hoxd3_MA0912.1	2	1	-	10.18982707702629	8.739992032869251	TTGTGATAATTAGCTT
chr4	16849604	16849605	chr4:16849605:T:C	rs17759073	T	C	C	Hoxd3_MA0912.1	9	1	+	7.698715276254253	0.8101428166888909	CTGGTCCAATTGATGT
chr4	16864540	16864541	chr4:16864541:T:G	rs28431897	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr4	16999747	16999748	chr4:16999748:A:G	rs10033091	A	G	-	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	17135660	17135661	chr4:17135661:C:A	rs629542	C	A	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	17232876	17232877	chr4:17232877:G:C	rs74332759	G	C	G	Hoxd3_MA0912.1	0	1	-	8.273220922639021	6.288844492755912	CTGGAGTAATGAATTG
chr4	17268519	17268520	chr4:17268520:T:C	rs55683356	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	17446669	17446670	chr4:17446670:C:T	rs2697696	C	T	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	17613806	17613807	chr4:17613807:C:T	rs4334752	C	T	C	Hoxd3_MA0912.1	7	1	+	8.583670965397351	3.7779300889474423	CTTGGCTCATTACTGT
chr4	18532220	18532221	chr4:18532221:A:G	rs12644833	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	19005629	19005630	chr4:19005630:A:T	rs370343443	A	T	a	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	19429896	19429897	chr4:19429897:C:T	rs28675174	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	19503234	19503235	chr4:19503235:G:T	rs56820448	G	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr4	19748495	19748496	chr4:19748496:T:G	rs1398283681	T	G	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	19880218	19880219	chr4:19880219:G:A	rs12642721	G	A	A	Hoxd3_MA0912.1	3	1	-	9.24243073542622	9.979111958005893	CATCGTTAATTAACCT
chr4	20603999	20604000	chr4:20604000:C:T	rs113727467	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	21261467	21261468	chr4:21261468:C:T	rs11735059	C	T	C	Hoxd3_MA0912.1	0	1	+	10.092475782645126	10.144981280023057	CTGAATCAATTACACT
chr4	21271213	21271214	chr4:21271214:G:T	rs6825513	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	21769486	21769487	chr4:21769487:G:T	rs13141904	G	T	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	22233277	22233278	chr4:22233278:A:G	rs34862873	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr4	22241766	22241767	chr4:22241767:C:G	rs556222296	C	G	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	22320267	22320268	chr4:22320268:C:G	rs1039352	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	22509631	22509632	chr4:22509632:C:A	rs113970209	C	A	C	Hoxd3_MA0912.1	14	1	-	8.408459541420324	8.020538460572482	TAGGGTTAATTGAAGG
chr4	22509652	22509653	chr4:22509653:C:T	rs111293559	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	22785112	22785113	chr4:22785113:G:A	rs358246	G	A	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	23324689	23324690	chr4:23324690:G:T	rs4697387	G	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	23408996	23408997	chr4:23408997:A:C	rs215459	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr4	23409182	23409183	chr4:23409183:A:G	rs148605997	A	G	A	Hoxd3_MA0912.1	8	1	+	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr4	23582095	23582096	chr4:23582096:C:T	rs10049900	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	23629752	23629753	chr4:23629753:C:T	rs883120	C	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	23737423	23737424	chr4:23737424:A:T	rs7678279	A	T	A	Hoxd3_MA0912.1	11	1	+	10.360935800673643	6.023244739579601	TTGGGATAATTATACT
chr4	23782936	23782937	chr4:23782937:G:A	rs73243613	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	23891942	23891943	chr4:23891943:G:A	rs56869809	G	A	G	Hoxd3_MA0912.1	5	1	-	7.219112771308717	7.536434213195125	CAGAGCCAATGACCTT
chr4	23891955	23891956	chr4:23891956:G:C	rs2946386	G	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	24702726	24702727	chr4:24702727:T:C	rs73248472	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	24794945	24794946	chr4:24794946:G:T	rs8192287	G	T	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	24938374	24938375	chr4:24938375:T:C	rs10004346	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	24958124	24958125	chr4:24958125:T:A	rs7697533	T	A	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	24965729	24965730	chr4:24965730:C:A	rs4697508	C	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	25651854	25651855	chr4:25651855:G:A	rs76792478	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	25669420	25669421	chr4:25669421:C:T	rs3815464	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	25991750	25991751	chr4:25991751:C:A	rs6828245	C	A	G	Hoxd3_MA0912.1	3	1	-	7.989373974244931	7.5391352791516635	CTGGTCTCATTAGCAT
chr4	26026988	26026989	chr4:26026989:G:A	rs6841496	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr4	26082183	26082184	chr4:26082184:G:A	rs771133061	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	26082188	26082189	chr4:26082189:C:T	rs145847338	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	26297502	26297503	chr4:26297503:C:T	rs1877209	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	26692812	26692813	chr4:26692813:C:T	rs115998404	C	T	C	Hoxd3_MA0912.1	15	1	-	9.268466646015431	8.427468019056215	CTGATTCAATTAAACG
chr4	27235001	27235002	chr4:27235002:T:C	rs35076070	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	27625150	27625151	chr4:27625151:T:G	chr4:27625151:T:G	T	G	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	27702599	27702600	chr4:27702600:G:T	rs6448532	G	T	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	27924722	27924723	chr4:27924723:C:A	rs61793891	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	27983684	27983685	chr4:27983685:T:C	rs2192543	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	28288400	28288401	chr4:28288401:C:T	rs573640439	C	T	-	Hoxd3_MA0912.1	12	1	+	8.6247981336078	7.418046213602937	TTTGGGCAATTACATT
chr4	28463306	28463307	chr4:28463307:A:G	rs79926006	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr4	29718531	29718532	chr4:29718532:C:T	rs7698231	C	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr4	30653519	30653520	chr4:30653520:G:A	rs77685948	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr4	31198848	31198849	chr4:31198849:G:A	rs56198155	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	31241306	31241307	chr4:31241307:C:A	rs79282950	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	32078545	32078546	chr4:32078546:A:G	rs4423921	A	G	A	Hoxd3_MA0912.1	8	1	+	8.373421419989986	1.4848489604246247	ATGAACCAATTACCTC
chr4	32243892	32243893	chr4:32243893:T:C	rs6831078	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	32672531	32672532	chr4:32672532:C:T	rs67304030	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	33011889	33011890	chr4:33011890:C:A	rs4618300	C	A	C	Hoxd3_MA0912.1	12	1	+	6.419581966260645	6.419581966260645	CTGACCTCATGACCCG
chr4	33369732	33369733	chr4:33369733:C:T	rs1053583063	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	33380075	33380076	chr4:33380076:T:G	rs547948079	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr4	33724008	33724009	chr4:33724009:A:G	rs2166108	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr4	34181848	34181849	chr4:34181849:C:A	chr4:34181849:C:A	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	34191832	34191833	chr4:34191833:A:G	rs6842952	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	35552356	35552357	chr4:35552357:C:A	rs78586305	C	A	A	Hoxd3_MA0912.1	2	1	-	10.476668810057388	9.159478240506644	ATGATTTAATTAACTC
chr4	35588694	35588695	chr4:35588695:A:G	rs181207055	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	35593571	35593572	chr4:35593572:G:A	rs190097805	G	A	G	Hoxd3_MA0912.1	13	1	-	9.5010947533128	8.896858024800427	ATTAATTAATTAACGG
chr4	36336720	36336721	chr4:36336721:T:C	rs905823228	T	C	T	Hoxd3_MA0912.1	3	1	-	8.855544136626982	8.741446385587958	CTTATCTAATTACATG
chr4	36423716	36423717	chr4:36423717:T:C	rs4524411	T	C	C	Hoxd3_MA0912.1	1	1	-	8.103433853734654	7.245609580360464	CATTGCTAATTACTGC
chr4	36467711	36467712	chr4:36467712:T:C	rs10012536	T	C	C	Hoxd3_MA0912.1	13	1	+	9.578783346595964	10.183020075108338	CTCAGTTAATTAATAT
chr4	36927135	36927136	chr4:36927136:G:A	rs11096843	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	36968515	36968516	chr4:36968516:T:C	rs11736634	T	C	T	Hoxd3_MA0912.1	11	1	-	8.433113326038418	6.647187377857426	CTGAACCAATTACATC
chr4	37040988	37040989	chr4:37040989:G:A	rs13127946	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	37295122	37295123	chr4:37295123:G:A	rs990535	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	37475419	37475420	chr4:37475420:A:G	rs1463573	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr4	37676195	37676196	chr4:37676196:C:G	rs78587598	C	G	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr4	37718957	37718958	chr4:37718958:T:C	rs12505604	T	C	T	Hoxd3_MA0912.1	5	1	+	9.093717864638917	8.77639642275251	CTGCGTTAATTAGAAT
chr4	37780596	37780597	chr4:37780597:C:T	rs4345193	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr4	37978532	37978533	chr4:37978533:T:A	rs185572412	T	A	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	38103539	38103540	chr4:38103540:A:G	rs933822	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr4	38105716	38105717	chr4:38105717:G:A	rs11728851	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	38130991	38130992	chr4:38130992:T:C	rs75794952	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr4	38328394	38328395	chr4:38328395:G:A	rs73243350	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	38384902	38384903	chr4:38384903:T:C	rs12506270	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr4	38389174	38389175	chr4:38389175:A:C	rs2046636	A	C	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	38715099	38715100	chr4:38715100:G:A	rs6845639	G	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	38781280	38781281	chr4:38781281:G:A	rs73142637	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	38801186	38801187	chr4:38801187:G:A	rs750669654	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	38872095	38872096	chr4:38872096:T:C	rs1472718	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	39459296	39459297	chr4:39459297:C:A	rs112734300	C	A	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	39459322	39459323	chr4:39459323:C:T	rs1458256	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	40185975	40185976	chr4:40185976:A:G	rs1397934	A	G	G	Hoxd3_MA0912.1	15	1	+	10.817630695749584	11.6586293227088	CTGAATTAATTACCCA
chr4	40185987	40185988	chr4:40185988:T:G	rs6847860	T	G	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	40298671	40298672	chr4:40298672:G:T	rs150603031	G	T	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	40419121	40419122	chr4:40419122:C:T	rs278939	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	40516987	40516988	chr4:40516988:A:G	rs582376	A	G	G	Hoxd3_MA0912.1	0	1	+	8.238610289102152	6.918162493779848	AGGGATTAATTACTCC
chr4	40516992	40516993	chr4:40516993:T:G	rs582370	T	G	G	Hoxd3_MA0912.1	12	1	-	9.684073586209507	9.684073586209507	TAGGAGTAATTAATCC
chr4	40607401	40607402	chr4:40607402:A:G	rs10938276	A	G	G	Hoxd3_MA0912.1	5	1	+	8.420859162071475	9.1454225388648	CTGGGATAATGAAAAT
chr4	40614574	40614575	chr4:40614575:T:C	rs11945586	T	C	T	Hoxd3_MA0912.1	13	1	-	8.200469244691005	7.226628062490297	GTGTTGTAATTACAGG
chr4	40679208	40679209	chr4:40679209:T:A	rs56321679	T	A	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	40804840	40804841	chr4:40804841:T:G	rs57130796	T	G	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr4	40904590	40904591	chr4:40904591:G:C	rs28651103	G	C	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	40904614	40904615	chr4:40904615:G:A	rs60442914	G	A	G	Hoxd3_MA0912.1	5	1	+	8.8676455342839	8.143082157490577	TTGTGGTCATTACAGG
chr4	40904632	40904633	chr4:40904633:G:A	rs79542621	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	40939907	40939908	chr4:40939908:T:C	rs4631085	T	C	T	Hoxd3_MA0912.1	3	1	-	8.427468019056215	8.313370268017191	CTGATTTAATTGCACA
chr4	40954421	40954422	chr4:40954422:G:C	rs7679154	G	C	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr4	41258584	41258585	chr4:41258585:T:C	rs78693231	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	41363112	41363113	chr4:41363113:A:G	rs76366870	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr4	41418331	41418332	chr4:41418332:C:T	rs73232195	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr4	41718974	41718975	chr4:41718975:G:A	rs11722563	G	A	G	Hoxd3_MA0912.1	14	1	-	7.99392154301323	7.429585096880939	CTGGATTAATTGTACC
chr4	41719001	41719002	chr4:41719002:C:A	rs180890638	C	A	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	41811545	41811546	chr4:41811546:C:A	rs6852804	C	A	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr4	42247758	42247759	chr4:42247759:A:G	rs9291212	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	42420535	42420536	chr4:42420536:A:C	rs4495069	A	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	42515193	42515194	chr4:42515194:T:C	rs4526008	T	C	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr4	42786180	42786181	chr4:42786181:T:C	rs77046415	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	42818734	42818735	chr4:42818735:T:C	rs4861225	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr4	44523295	44523296	chr4:44523296:G:A	rs17600316	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr4	44645074	44645075	chr4:44645075:G:A	rs1388309	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	44721206	44721207	chr4:44721207:C:G	rs6447370	C	G	G	Hoxd3_MA0912.1	12	1	+	9.968777583911528	9.001255352972498	TTTATGTAATTACCAT
chr4	44861545	44861546	chr4:44861546:G:A	rs13138300	G	A	G	Hoxd3_MA0912.1	2	1	+	9.149735556646645	7.699900512489606	TTGGAGTAATGAAATT
chr4	46254787	46254788	chr4:46254788:A:G	rs534459	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr4	47271441	47271442	chr4:47271442:C:T	rs10018597	C	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	47443569	47443570	chr4:47443570:T:C	rs982106718	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	47464003	47464004	chr4:47464004:G:T	rs4532215	G	T	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	47784798	47784799	chr4:47784799:C:G	rs6815011	C	G	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	48074073	48074074	chr4:48074074:G:A	rs55781011	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	48571010	48571011	chr4:48571011:T:C	rs1507865	T	C	T	Hoxd3_MA0912.1	9	1	+	8.114935586767102	1.2263631272017392	CTGGGCTCATTGAAGT
chr4	48571020	48571021	chr4:48571021:T:C	rs17575727	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	48653941	48653942	chr4:48653942:A:C	rs1314846724	A	C	A	Hoxd3_MA0912.1	11	1	+	8.352881962247592	1.6082457928352623	TTGGCTTCATTACCAT
chr4	49105953	49105954	chr4:49105954:T:C	rs62643213	T	C	.	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	52057296	52057297	chr4:52057297:T:G	rs55694005	T	G	T	Hoxd3_MA0912.1	13	1	-	9.576301983335018	10.180538711847392	ATGGACTAATTATACT
chr4	52383816	52383817	chr4:52383817:G:T	rs6554484	G	T	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	52852681	52852682	chr4:52852682:G:T	chr4:52852682:G:T	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	52957972	52957973	chr4:52957973:C:T	rs139813863	C	T	C	Hoxd3_MA0912.1	3	1	-	9.220867625334941	9.334965376373965	TAGGGTTAATGACACT
chr4	53119913	53119914	chr4:53119914:A:G	rs3849654	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr4	53285857	53285858	chr4:53285858:A:T	rs900110	A	T	A	Hoxd3_MA0912.1	6	1	-	7.319225679802413	2.9815346187083716	CTGGGCTCATGACCTG
chr4	53474448	53474449	chr4:53474449:C:T	rs141863224	C	T	c	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	53474449	53474450	chr4:53474450:G:A	rs6841853	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	53475800	53475801	chr4:53475801:A:C	rs61240802	A	C	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	53475801	53475802	chr4:53475802:A:T	rs57587034	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	53533133	53533134	chr4:53533134:A:G	rs17082966	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	53986198	53986199	chr4:53986199:C:T	rs77757018	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	53986240	53986241	chr4:53986241:G:C	rs73252921	G	C	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	54123360	54123361	chr4:54123361:C:T	rs7682159	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr4	54215990	54215991	chr4:54215991:G:A	rs11133315	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	54227333	54227334	chr4:54227334:A:G	rs374703884	A	G	A	Hoxd3_MA0912.1	0	1	-	8.369606332080446	8.317100834702517	TGGTAGTAATTACCTG
chr4	54275125	54275126	chr4:54275126:G:A	rs2307050	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	54429605	54429606	chr4:54429606:C:T	rs985567	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	54646014	54646015	chr4:54646015:G:A	rs76488193	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr4	54677034	54677035	chr4:54677035:T:C	rs112147886	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	54837562	54837563	chr4:54837563:G:A	rs2646318	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	55116616	55116617	chr4:55116617:T:C	rs34945396	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr4	55133017	55133018	chr4:55133018:G:A	rs17711225	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	55736802	55736803	chr4:55736803:G:T	chr4:55736803:G:T	G	T	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	55871513	55871514	chr4:55871514:G:C	rs1072799	G	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr4	55942075	55942076	chr4:55942076:T:C	rs2593072	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	56008350	56008351	chr4:56008351:A:C	rs3214045	A	C	a	Hoxd3_MA0912.1	12	1	-	8.488485970534299	8.727715659600133	CTGAGATCATTATCTT
chr4	56178858	56178859	chr4:56178859:T:C	rs78144680	T	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	56181876	56181877	chr4:56181877:A:C	rs11133430	A	C	A	Hoxd3_MA0912.1	9	1	-	8.991511731387288	4.500834544620297	CAGATGTAATTAGTTT
chr4	56575837	56575838	chr4:56575838:C:A	rs4600976	C	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	56618657	56618658	chr4:56618658:A:T	rs74376021	A	T	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	56663419	56663420	chr4:56663420:A:G	rs4365784	A	G	G	Hoxd3_MA0912.1	9	1	-	8.941630774466523	2.053058314901161	ATGGACTAATTACTGA
chr4	56828511	56828512	chr4:56828512:C:G	rs113691237	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr4	56828524	56828525	chr4:56828525:A:G	rs13140847	A	G	A	Hoxd3_MA0912.1	9	1	-	9.468447430464403	2.5798749708990405	ATGATTCAATTACCTT
chr4	56865788	56865789	chr4:56865789:T:G	rs12499072	T	G	T	Hoxd3_MA0912.1	12	1	-	7.617310070799974	7.617310070799974	GTGAGCCAATTAAACC
chr4	56872302	56872303	chr4:56872303:T:C	rs11730321	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	56872324	56872325	chr4:56872325:G:T	rs62308111	G	T	G	Hoxd3_MA0912.1	13	1	-	8.378160883161302	7.7739241546489275	CTTGACTAATTAGCTG
chr4	56907428	56907429	chr4:56907429:C:G	rs1623306	C	G	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr4	56907434	56907435	chr4:56907435:C:T	rs71601658	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	57051765	57051766	chr4:57051766:T:G	rs34060938	T	G	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	57051836	57051837	chr4:57051837:G:C	rs35551730	G	C	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	57308630	57308631	chr4:57308631:T:A	rs17087938	T	A	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	57355513	57355514	chr4:57355514:G:A	rs10517388	G	A	G	Hoxd3_MA0912.1	14	1	-	9.211327810307738	8.646991364175447	CTGTAGTCATTACTCT
chr4	57405758	57405759	chr4:57405759:T:A	rs111361750	T	A	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	57438229	57438230	chr4:57438230:G:A	rs4242011	G	A	A	Hoxd3_MA0912.1	5	1	-	9.639314578408396	9.956636020294804	TTATGCTAATTAAATT
chr4	58070650	58070651	chr4:58070651:A:G	rs17089092	A	G	G	Hoxd3_MA0912.1	3	1	-	9.166655078437675	8.429973855858002	CTGTATTCATTAACCC
chr4	59621516	59621517	chr4:59621517:A:G	rs6828465	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	59873110	59873111	chr4:59873111:A:C	rs11726948	A	C	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr4	60133628	60133629	chr4:60133629:A:G	rs35114166	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr4	60133638	60133639	chr4:60133639:A:T	rs56799449	A	T	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	60934520	60934521	chr4:60934521:G:A	rs2045200	G	A	g	Hoxd3_MA0912.1	2	1	+	8.35073671982155	6.90090167566451	TTGCAGTAATGAAAGT
chr4	61127532	61127533	chr4:61127533:G:A	rs2342539	G	A	G	Hoxd3_MA0912.1	4	1	+	8.752236363654474	8.1479996351421	GTGAGTCAATTAACTT
chr4	61304237	61304238	chr4:61304238:C:T	rs17828318	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	61596609	61596610	chr4:61596610:T:A	rs6551634	T	A	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	62204208	62204209	chr4:62204209:G:C	rs2706026	G	C	g	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr4	62532029	62532030	chr4:62532030:C:A	rs6854964	C	A	A	Hoxd3_MA0912.1	3	1	-	8.560047406058162	8.109808710964895	TTGGAGCAATTACATC
chr4	62565035	62565036	chr4:62565036:A:C	rs11933567	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr4	63653203	63653204	chr4:63653204:G:A	rs921901	G	A	G	Hoxd3_MA0912.1	4	1	+	7.875695502375557	7.271458773863182	ATGAGGCAATTAGCCA
chr4	63729398	63729399	chr4:63729399:A:T	rs79518281	A	T	T	Hoxd3_MA0912.1	11	1	+	10.097421297268278	5.759730236174239	CTGAGATAATTAGATT
chr4	64153902	64153903	chr4:64153903:T:C	rs79415802	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	64353433	64353434	chr4:64353434:G:T	rs10014267	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	64616684	64616685	chr4:64616685:C:T	rs4485830	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr4	64646812	64646813	chr4:64646813:T:A	rs9998317	T	A	T	Hoxd3_MA0912.1	4	1	+	9.468447430464403	9.468447430464403	ATGATTCAATTACCTT
chr4	64698174	64698175	chr4:64698175:A:T	rs4607255	A	T	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	64727633	64727634	chr4:64727634:G:A	rs72643277	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	64897873	64897874	chr4:64897874:A:G	rs4860174	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr4	64954010	64954011	chr4:64954011:T:A	rs1837655	T	A	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	65502663	65502664	chr4:65502664:T:G	rs34030982	T	G	T	Hoxd3_MA0912.1	3	1	-	10.332815208246615	9.03179753953465	ATGAACTAATTACATT
chr4	65508485	65508486	chr4:65508486:T:C	rs78732508	T	C	T	Hoxd3_MA0912.1	15	1	-	8.883588611949147	9.724587238908363	CTGAGTTAATGAACTA
chr4	65853329	65853330	chr4:65853330:C:T	rs17756441	C	T	C	Hoxd3_MA0912.1	2	1	-	9.88290458459652	8.433069540439483	TTGTTTTAATTAGCAT
chr4	66061779	66061780	chr4:66061780:A:G	rs6839520	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	66062519	66062520	chr4:66062520:T:C	rs2350715	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	66732006	66732007	chr4:66732007:A:C	rs60725195	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	66949785	66949786	chr4:66949786:A:G	rs10002111	A	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	67142100	67142101	chr4:67142101:T:C	rs61401418	T	C	T	Hoxd3_MA0912.1	9	1	+	9.51869064817889	2.630118188613527	TTTATCTAATTAATCC
chr4	67334097	67334098	chr4:67334098:T:C	rs9312176	T	C	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	67933885	67933886	chr4:67933886:C:T	rs73823323	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr4	68368040	68368041	chr4:68368041:G:A	rs140537299	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	68379919	68379920	chr4:68379920:C:T	rs4860935	C	T	c	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	68449829	68449830	chr4:68449830:G:T	rs36030967	G	T	T	Hoxd3_MA0912.1	0	1	-	9.7456658398706	9.081737205309796	CAGATGTAATTACACC
chr4	68572596	68572597	chr4:68572597:A:G	rs10029892	A	G	a	Hoxd3_MA0912.1	14	1	-	8.52912650292843	9.09346294906072	AAGAGCTAATTGCCTT
chr4	68676381	68676382	chr4:68676382:C:T	rs12650728	C	T	-	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	68895592	68895593	chr4:68895593:A:G	rs78618349	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	69079290	69079291	chr4:69079291:C:T	rs7657426	C	T	.	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr4	70256964	70256965	chr4:70256965:T:G	rs62305582	T	G	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	70993079	70993080	chr4:70993080:T:G	chr4:70993080:T:G	T	G	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	71526288	71526289	chr4:71526289:G:T	rs34973757	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	71526315	71526316	chr4:71526316:A:G	rs1453446	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	71584471	71584472	chr4:71584472:G:A	rs4694404	G	A	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	71729940	71729941	chr4:71729941:A:G	rs16846886	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	71881490	71881491	chr4:71881491:C:A	rs4694438	C	A	.	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	72194289	72194290	chr4:72194290:G:A	rs79428984	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	72264665	72264666	chr4:72264666:A:C	chr4:72264666:A:C	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr4	72569593	72569594	chr4:72569594:C:T	rs72858310	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	72974332	72974333	chr4:72974333:G:T	rs1460986	G	T	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	73540997	73540998	chr4:73540998:A:T	rs10518115	A	T	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	73575535	73575536	chr4:73575536:A:C	rs79496712	A	C	A	Hoxd3_MA0912.1	15	1	-	9.299382964378392	8.475373827748697	TTAAGTTAATTGAACT
chr4	73667054	73667055	chr4:73667055:C:G	rs28821582	C	G	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr4	73684144	73684145	chr4:73684145:C:T	rs1247639	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	73860571	73860572	chr4:73860572:C:T	rs10938103	C	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	73951377	73951378	chr4:73951378:A:G	rs4399951	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	74034828	74034829	chr4:74034829:A:C	rs538249417	A	C	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	74202156	74202157	chr4:74202157:T:C	rs114075527	T	C	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr4	74223893	74223894	chr4:74223894:T:G	rs1011017954	T	G	T	Hoxd3_MA0912.1	9	1	+	10.117786681620354	5.627109494853363	TTAAGTTAATTAGTCT
chr4	74394826	74394827	chr4:74394827:C:G	rs16851145	C	G	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	74479148	74479149	chr4:74479149:G:A	rs1246406	G	A	A	Hoxd3_MA0912.1	15	1	+	7.559747595179868	6.718748968220652	TTGGGCTCATTGCCTG
chr4	74660418	74660419	chr4:74660419:A:G	rs73824653	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr4	74777665	74777666	chr4:74777666:A:G	rs72867585	A	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	75024385	75024386	chr4:75024386:T:C	rs72660383	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	75268193	75268194	chr4:75268194:T:C	rs12502693	T	C	C	Hoxd3_MA0912.1	13	1	-	8.279664433214753	7.305823251014045	TAGGGGCAATTACAGG
chr4	75308280	75308281	chr4:75308281:G:A	rs76645667	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	75489895	75489896	chr4:75489896:T:A	rs2867921	T	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	75631607	75631608	chr4:75631608:G:A	rs3853183	G	A	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	76053255	76053256	chr4:76053256:A:G	rs4535358	A	G	A	Hoxd3_MA0912.1	13	1	+	10.278631848832028	9.30479066663132	TTGGCTTAATTAAATT
chr4	76378197	76378198	chr4:76378198:C:T	rs10027750	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr4	76414607	76414608	chr4:76414608:T:C	rs13137784	T	C	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr4	76447115	76447116	chr4:76447116:T:A	rs190128890	T	A	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr4	76611670	76611671	chr4:76611671:G:A	rs73828194	G	A	G	Hoxd3_MA0912.1	5	1	+	7.974771482161925	7.250208105368602	CTTGGGTAATGAAGCT
chr4	76798658	76798659	chr4:76798659:C:T	rs344107	C	T	T	Hoxd3_MA0912.1	4	1	-	8.908591381350314	8.304354652837942	CACTGTTAATTACACT
chr4	76872675	76872676	chr4:76872676:T:C	rs6532676	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	77156930	77156931	chr4:77156931:G:C	rs114356561	G	C	G	Hoxd3_MA0912.1	15	1	-	7.72149442093145	7.675189852889764	CTGGTCTCATTACGCC
chr4	77355405	77355406	chr4:77355406:C:G	rs10000203	C	G	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	78324878	78324879	chr4:78324879:C:T	rs6823481	C	T	C	Hoxd3_MA0912.1	5	1	-	8.819845027173713	8.09528165038039	TGGGGGTAATTACATG
chr4	78332108	78332109	chr4:78332109:G:A	rs345496	G	A	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr4	78360749	78360750	chr4:78360750:G:A	rs6814410	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	78534271	78534272	chr4:78534272:A:G	rs114384109	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	78652332	78652333	chr4:78652333:C:A	rs76118590	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	78652376	78652377	chr4:78652377:G:T	rs11939451	G	T	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	78881476	78881477	chr4:78881477:T:C	rs76696436	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	79023911	79023912	chr4:79023912:G:A	rs113242181	G	A	G	Hoxd3_MA0912.1	12	1	-	7.800882218504677	6.594130298499813	TTAAGGCCATTACCCT
chr4	79082987	79082988	chr4:79082988:G:A	rs73828204	G	A	G	Hoxd3_MA0912.1	4	1	+	7.771479105434561	7.1672423769221885	ATGGGACAATTACCAC
chr4	79288233	79288234	chr4:79288234:T:A	rs1385051	T	A	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	79338353	79338354	chr4:79338354:G:C	rs72664066	G	C	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	79473707	79473708	chr4:79473708:C:T	rs7685006	C	T	T	Hoxd3_MA0912.1	4	1	-	9.328441129103389	8.724204400591015	CAGAGTTAATTAAGGC
chr4	79662458	79662459	chr4:79662459:C:T	rs62297653	C	T	c	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	80005846	80005847	chr4:80005847:C:T	rs12504282	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	80014868	80014869	chr4:80014869:T:C	rs28464573	T	C	T	Hoxd3_MA0912.1	8	1	-	7.971888299396422	1.0833158398310594	ATCTGCTAATTGACCT
chr4	80226377	80226378	chr4:80226378:G:A	rs10518236	G	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	80305555	80305556	chr4:80305556:A:G	rs11940372	A	G	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr4	80989909	80989910	chr4:80989910:T:G	rs28420618	T	G	G	Hoxd3_MA0912.1	6	1	+	8.366362322932508	1.621726153520179	TTCGCGTAATTACTTT
chr4	80991610	80991611	chr4:80991611:G:C	rs28416900	G	C	C	Hoxd3_MA0912.1	2	1	+	9.89068989977657	8.107215482082623	TTGATCTAATTATCAT
chr4	81348304	81348305	chr4:81348305:G:A	rs10017744	G	A	A	Hoxd3_MA0912.1	2	1	+	9.092072517129372	7.642237472972333	TAGGTGTCATTACCCT
chr4	81349856	81349857	chr4:81349857:G:T	rs10021462	G	T	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	81349870	81349871	chr4:81349871:C:T	rs58877260	C	T	T	Hoxd3_MA0912.1	0	1	+	8.613296740558484	8.665802237936415	CTGACCTCATTACTCT
chr4	81421697	81421698	chr4:81421698:C:T	rs560946024	C	T	C	Hoxd3_MA0912.1	13	1	-	8.425503046106554	9.399344228307264	CTGTTGTAATTGCGCT
chr4	81432607	81432608	chr4:81432608:G:T	rs1035007	G	T	G	Hoxd3_MA0912.1	0	1	-	8.674466016619485	8.01053738205868	CTTAGGTAATTAAGTG
chr4	81441127	81441128	chr4:81441128:G:A	rs74595545	G	A	G	Hoxd3_MA0912.1	15	1	+	8.68341213012419	7.842413503164973	TTGGTGTAATTATGCG
chr4	81461918	81461919	chr4:81461919:G:C	rs6535251	G	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr4	81492464	81492465	chr4:81492465:C:T	rs72663892	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	81492523	81492524	chr4:81492524:T:G	rs7691170	T	G	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	81799486	81799487	chr4:81799487:T:A	rs653270	T	A	T	Hoxd3_MA0912.1	3	1	-	6.808049088590417	6.243712642458126	CTGATGCAATGGCCCT
chr4	81986061	81986062	chr4:81986062:A:G	rs1373241	A	G	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	82032250	82032251	chr4:82032251:A:G	rs55695516	A	G	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	82108521	82108522	chr4:82108522:G:T	rs4693018	G	T	g	Hoxd3_MA0912.1	14	1	-	10.129791968349943	9.009411273301362	CTTGTCTAATTAAACT
chr4	82223856	82223857	chr4:82223857:G:C	rs550357237	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	82352067	82352068	chr4:82352068:G:C	rs17005587	G	C	g	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr4	82599516	82599517	chr4:82599517:G:A	rs77946577	G	A	G	Hoxd3_MA0912.1	0	1	-	7.814469223831907	7.8669747212098375	CTGATGCAATTGGCCT
chr4	82621503	82621504	chr4:82621504:G:A	rs7356293	G	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	82761130	82761131	chr4:82761131:A:G	rs11729916	A	G	A	Hoxd3_MA0912.1	13	1	+	8.428122646170177	7.454281463969469	ATGAATCAATTACAGG
chr4	82780722	82780723	chr4:82780723:T:C	rs10516680	T	C	T	Hoxd3_MA0912.1	7	1	-	9.710815722597049	2.9311324799666223	AAGTGCTAATTAATCT
chr4	83510490	83510491	chr4:83510491:C:A	rs10008742	C	A	C	Hoxd3_MA0912.1	13	1	+	8.022717482214196	7.418480753701824	CTGTTTTAATGAGCGC
chr4	83569967	83569968	chr4:83569968:A:C	rs28504032	A	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr4	83605121	83605122	chr4:83605122:T:C	rs1521531	T	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	83751781	83751782	chr4:83751782:C:A	rs4693639	C	A	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	83751829	83751830	chr4:83751830:A:G	rs142043753	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	83844398	83844399	chr4:83844399:C:T	rs17356992	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	84038486	84038487	chr4:84038487:T:C	rs13147116	T	C	T	Hoxd3_MA0912.1	5	1	-	8.917533321951154	9.642096698744478	CTGAGATAATGAACTC
chr4	84102279	84102280	chr4:84102280:G:A	rs11930518	G	A	G	Hoxd3_MA0912.1	13	1	-	9.950597387960457	9.346360659448083	TTGTGATAATTATCTT
chr4	84927621	84927622	chr4:84927622:C:G	rs111481594	C	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	85127199	85127200	chr4:85127200:T:G	rs6811593	T	G	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	85128925	85128926	chr4:85128926:T:C	rs13133142	T	C	T	Hoxd3_MA0912.1	6	1	+	8.583840548106876	6.797914599925882	AGAAGGTAATTACCGT
chr4	85128926	85128927	chr4:85128927:A:C	rs79195160	A	C	A	Hoxd3_MA0912.1	7	1	+	8.583840548106876	6.609898181926356	AGAAGGTAATTACCGT
chr4	85595900	85595901	chr4:85595901:A:G	rs10021805	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	85677421	85677422	chr4:85677422:A:G	rs7680209	A	G	G	Hoxd3_MA0912.1	15	1	-	9.280935847380917	8.503231278792908	ATAGGTTAATTAAGCT
chr4	85829159	85829160	chr4:85829160:T:C	rs11097076	T	C	T	Hoxd3_MA0912.1	13	1	+	9.523492624399598	10.127729352911972	CAGTTTTAATTAATTT
chr4	86403814	86403815	chr4:86403815:A:G	rs61686149	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	86653420	86653421	chr4:86653421:T:C	rs113153971	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr4	86911447	86911448	chr4:86911448:G:A	rs3113494	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	87644534	87644535	chr4:87644535:C:T	rs7375788	C	T	T	Hoxd3_MA0912.1	14	1	-	9.222928863022815	8.278963533258683	CTGTTGCAATTACTGT
chr4	87679229	87679230	chr4:87679230:T:G	rs62316003	T	G	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	87805034	87805035	chr4:87805035:C:T	rs34970125	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	87896210	87896211	chr4:87896211:G:A	rs57660351	G	A	G	Hoxd3_MA0912.1	15	1	-	9.49254887433915	10.270253442927158	TTGTAGTAATTAGACC
chr4	87930863	87930864	chr4:87930864:G:A	rs58984097	G	A	g	Hoxd3_MA0912.1	16	0	+	0	0	.
chr4	87949423	87949424	chr4:87949424:A:T	rs1004395	A	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	89119695	89119696	chr4:89119696:A:G	rs10433881	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr4	89135271	89135272	chr4:89135272:C:T	rs74906937	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	89290627	89290628	chr4:89290628:T:C	rs2005104	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr4	89435268	89435269	chr4:89435269:A:G	rs7691086	A	G	G	Hoxd3_MA0912.1	0	1	-	9.738129628141923	9.685624130763992	TGTAGTTAATTAACCT
chr4	89454362	89454363	chr4:89454363:C:T	rs772500	C	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	89510087	89510088	chr4:89510088:A:G	rs10030148	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr4	89753279	89753280	chr4:89753280:G:A	rs356168	G	A	G	Hoxd3_MA0912.1	6	1	-	7.969474856880143	9.755400805061136	TTGTTCCAATTACCAC
chr4	89786751	89786752	chr4:89786752:C:T	rs3775438	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr4	89995285	89995286	chr4:89995286:C:T	rs10516854	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	90027924	90027925	chr4:90027925:A:G	rs113476120	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr4	90076203	90076204	chr4:90076204:G:C	rs12649987	G	C	G	Hoxd3_MA0912.1	4	1	+	9.12163748768988	7.543559576976797	AAGTGGTAATTAAACC
chr4	90579664	90579665	chr4:90579665:C:A	rs28523654	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	91488737	91488738	chr4:91488738:T:C	rs10009559	T	C	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	92544145	92544146	chr4:92544146:C:T	rs11097340	C	T	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr4	92604934	92604935	chr4:92604935:G:A	rs11934648	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	92925407	92925408	chr4:92925408:A:T	rs183213130	A	T	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	93201975	93201976	chr4:93201976:G:T	rs62309156	G	T	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	93689473	93689474	chr4:93689474:A:T	rs17020986	A	T	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr4	93825770	93825771	chr4:93825771:T:C	rs6836045	T	C	T	Hoxd3_MA0912.1	7	1	-	8.373421419989986	1.59373817735956	ATGATCCAATTACCTC
chr4	93825780	93825781	chr4:93825781:G:A	rs6810762	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	94307887	94307888	chr4:94307888:A:T	rs2016483	A	T	T	Hoxd3_MA0912.1	9	1	-	10.501340444634167	6.010663257867174	TTTGGTTAATTATCCT
chr4	94642659	94642660	chr4:94642660:A:G	chr4:94642660:A:G	A	G	A	Hoxd3_MA0912.1	3	1	-	10.292051603764715	9.55537038118504	CTATGTTAATTACTGT
chr4	94642662	94642663	chr4:94642663:G:A	rs77285346	G	A	G	Hoxd3_MA0912.1	0	1	-	10.292051603764715	10.344557101142646	CTATGTTAATTACTGT
chr4	94878101	94878102	chr4:94878102:G:A	rs72887871	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr4	95363892	95363893	chr4:95363893:A:C	rs2621467	A	C	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr4	95632938	95632939	chr4:95632939:C:T	rs7697645	C	T	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	95642577	95642578	chr4:95642578:C:G	rs7681580	C	G	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	95705798	95705799	chr4:95705799:G:A	rs72884057	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	95803090	95803091	chr4:95803091:G:T	rs13116310	G	T	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	95985496	95985497	chr4:95985497:T:C	rs17024965	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	96593621	96593622	chr4:96593622:C:A	rs13118976	C	A	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr4	96649455	96649456	chr4:96649456:C:T	rs11735922	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr4	97142620	97142621	chr4:97142621:C:T	rs116495998	C	T	C	Hoxd3_MA0912.1	0	1	+	7.414737347589837	7.4672428449677675	CTCAGGCAATGAACCT
chr4	97183679	97183680	chr4:97183680:G:T	rs11930739	G	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr4	97216235	97216236	chr4:97216236:G:C	rs7684189	G	C	C	Hoxd3_MA0912.1	2	1	-	8.78444298525798	10.56791740295193	CTCATGTAATTGACCT
chr4	98046966	98046967	chr4:98046967:T:A	rs7691433	T	A	T	Hoxd3_MA0912.1	1	1	+	9.180516085654833	7.9542798714928935	GTGAGCTAATTAAAGG
chr4	98203556	98203557	chr4:98203557:G:C	rs10018670	G	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	98619921	98619922	chr4:98619922:A:G	rs11946198	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	98619942	98619943	chr4:98619943:T:C	rs11941880	T	C	C	Hoxd3_MA0912.1	10	1	+	8.07528688063485	1.2956036380044227	AGGATCTAATTACCTC
chr4	98855615	98855616	chr4:98855616:C:G	rs6829146	C	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	98892552	98892553	chr4:98892553:G:A	rs377121058	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	99664857	99664858	chr4:99664858:G:A	rs7678889	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr4	100286638	100286639	chr4:100286639:T:A	rs72690309	T	A	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	100494271	100494272	chr4:100494272:T:C	rs3775362	T	C	C	Hoxd3_MA0912.1	15	1	+	10.207748913131912	9.430044344543903	GTGGGTTAATTAAAGT
chr4	100516184	100516185	chr4:100516185:G:T	rs1501093	G	T	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	100827028	100827029	chr4:100827029:G:A	rs6419156	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	101016547	101016548	chr4:101016548:A:C	rs1581622	A	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	101605059	101605060	chr4:101605060:C:T	rs76460042	C	T	C	Hoxd3_MA0912.1	2	1	-	9.126432979045772	7.676597934888733	ATGGTTTCATTAATCT
chr4	101835836	101835837	chr4:101835837:G:A	rs17031698	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	102042753	102042754	chr4:102042754:C:G	rs2631269	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	102115148	102115149	chr4:102115149:T:G	rs238510	T	G	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr4	102585216	102585217	chr4:102585217:G:C	rs1610152	G	C	G	Hoxd3_MA0912.1	13	1	-	8.751931324697729	7.173853413984647	CTTTTCTAATTAGCTT
chr4	102828283	102828284	chr4:102828284:T:C	rs144269878	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	102828286	102828287	chr4:102828287:G:A	rs223388	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	104635704	104635705	chr4:104635705:A:G	rs11097867	A	G	A	Hoxd3_MA0912.1	11	1	+	8.728203943156426	6.942277994975434	CTGCTCTAATTAGTTT
chr4	105194292	105194293	chr4:105194293:G:T	rs1015521	G	T	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	105545016	105545017	chr4:105545017:C:T	rs730207	C	T	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	105570483	105570484	chr4:105570484:G:C	rs7671687	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr4	105764667	105764668	chr4:105764668:C:A	rs72671896	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	105993083	105993084	chr4:105993084:T:G	rs1108245	T	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	106114448	106114449	chr4:106114449:C:T	rs56260521	C	T	C	Hoxd3_MA0912.1	5	1	-	8.880838650671796	8.156275273878471	TTTGCGTAATTAACAT
chr4	106507789	106507790	chr4:106507790:G:C	rs2049207	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	106708323	106708324	chr4:106708324:G:T	rs138195297	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	106924636	106924637	chr4:106924637:C:T	rs17037102	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr4	107760662	107760663	chr4:107760663:G:A	rs4585383	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr4	107826067	107826068	chr4:107826068:G:C	rs551335424	G	C	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr4	108109163	108109164	chr4:108109164:G:T	rs7698317	G	T	G	Hoxd3_MA0912.1	2	1	+	9.77050762864548	8.453317059094736	CAGAACTAATTAAATT
chr4	108466141	108466142	chr4:108466142:A:G	rs72889372	A	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	108530964	108530965	chr4:108530965:A:G	rs73838439	A	G	g	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr4	108929419	108929420	chr4:108929420:G:A	rs72668383	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr4	108957706	108957707	chr4:108957707:C:T	rs12639812	C	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr4	109816962	109816963	chr4:109816963:C:T	rs7676676	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	109913763	109913764	chr4:109913764:A:G	rs11098053	A	G	A	Hoxd3_MA0912.1	9	1	-	8.392608322521259	1.504035862955896	AGGTGTTAATTACTCC
chr4	110182032	110182033	chr4:110182033:A:G	rs973621354	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	110212105	110212106	chr4:110212106:C:T	rs7670475	C	T	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr4	110614259	110614260	chr4:110614260:C:G	rs114650775	C	G	C	Hoxd3_MA0912.1	5	1	+	10.783375720351703	10.97190205403254	CTGATCTAATTACACC
chr4	110867762	110867763	chr4:110867763:T:A	rs183153631	T	A	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	111563015	111563016	chr4:111563016:C:A	rs7663202	C	A	A	Hoxd3_MA0912.1	13	1	+	10.578872754519317	9.974636026006943	TTTGGGTAATTACCGG
chr4	111847836	111847837	chr4:111847837:C:T	rs408523	C	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	111847847	111847848	chr4:111847848:T:C	rs385040	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr4	112557978	112557979	chr4:112557979:G:A	rs6533627	G	A	a	Hoxd3_MA0912.1	13	1	-	10.459668683293309	9.855431954780935	ATGGGCTAATTAGCTT
chr4	113154059	113154060	chr4:113154060:A:G	rs10516592	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	113436105	113436106	chr4:113436106:G:A	rs1554668	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr4	113436129	113436130	chr4:113436130:A:G	rs1011815	A	G	A	Hoxd3_MA0912.1	8	1	+	8.375289121612944	1.4867166620475811	TTGGCCTCATTAATGT
chr4	113586176	113586177	chr4:113586177:G:C	rs13149304	G	C	C	Hoxd3_MA0912.1	6	1	-	9.827659838136649	4.8689496169053115	TTGAACCAATTACTCT
chr4	113789137	113789138	chr4:113789138:A:G	rs6850980	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	113975747	113975748	chr4:113975748:G:A	rs6827199	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	114082108	114082109	chr4:114082109:T:A	rs73845758	T	A	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	114178677	114178678	chr4:114178678:A:C	rs112257838	A	C	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	114225372	114225373	chr4:114225373:G:T	rs1497596	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr4	114479771	114479772	chr4:114479772:A:G	rs7685549	A	G	A	Hoxd3_MA0912.1	2	1	+	8.060541535218604	9.510376579375643	CAATGTCAATTACCCT
chr4	114494305	114494306	chr4:114494306:T:C	rs138836721	T	C	T	Hoxd3_MA0912.1	8	1	-	8.71233608127439	1.823763621709028	GTGAGTCAATTACACT
chr4	114563571	114563572	chr4:114563572:C:G	rs13110751	C	G	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	114599942	114599943	chr4:114599943:C:T	rs28459461	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr4	114780665	114780666	chr4:114780666:A:C	rs116771106	A	C	A	Hoxd3_MA0912.1	3	1	+	7.646056032235198	6.345038363523234	TTGAGGCAATGAAAGG
chr4	115063654	115063655	chr4:115063655:A:G	rs516919	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr4	115297563	115297564	chr4:115297564:T:C	rs6853566	T	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	116915364	116915365	chr4:116915365:C:T	rs1822048	C	T	c	Hoxd3_MA0912.1	5	1	-	8.720399201109842	7.995835824316519	TTGGAGCAATTGCCCT
chr4	116944316	116944317	chr4:116944317:G:A	rs1946910	G	A	A	Hoxd3_MA0912.1	5	1	+	8.476885602417951	7.752322225624628	TTGGGGTCATTAAAGA
chr4	117455397	117455398	chr4:117455398:G:T	rs17861942	G	T	G	Hoxd3_MA0912.1	2	1	+	8.050964586802689	6.733774017251943	ATGATGTAATGACCCA
chr4	117491231	117491232	chr4:117491232:T:A	rs9993338	T	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	117820429	117820430	chr4:117820430:C:T	rs6852960	C	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr4	119098504	119098505	chr4:119098505:C:T	rs4565063	C	T	C	Hoxd3_MA0912.1	15	1	+	8.889234092286149	9.666938660874157	CTGAGACAATTAATGC
chr4	119107694	119107695	chr4:119107695:A:C	rs17332199	A	C	A	Hoxd3_MA0912.1	1	1	-	8.32572642001695	6.241665932480821	TTGGTGTCATTACTTG
chr4	119207158	119207159	chr4:119207159:G:A	rs77349285	G	A	G	Hoxd3_MA0912.1	12	1	-	7.961191316058817	6.754439396053952	TTTTTGCAATTACCCC
chr4	119467074	119467075	chr4:119467075:G:A	rs7654529	G	A	g	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	119467099	119467100	chr4:119467100:G:A	rs7654546	G	A	g	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	119525892	119525893	chr4:119525893:A:G	rs3733525	A	G	A	Hoxd3_MA0912.1	5	1	-	8.384406481513032	8.067085039626624	CCATATTAATTACCCT
chr4	119710443	119710444	chr4:119710444:G:A	rs28642385	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	120318102	120318103	chr4:120318103:G:A	rs2715952	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr4	120386929	120386930	chr4:120386930:C:T	rs6819743	C	T	C	Hoxd3_MA0912.1	3	1	-	9.568516668154968	9.682614419193992	ATGGTTTAATTAGATT
chr4	120488952	120488953	chr4:120488953:G:A	rs17050611	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	120926157	120926158	chr4:120926158:G:A	rs78483215	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	121459337	121459338	chr4:121459338:T:G	rs691403	T	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr4	121612780	121612781	chr4:121612781:T:C	rs17442542	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	123068401	123068402	chr4:123068402:A:C	chr4:123068402:A:C	A	C	A	Hoxd3_MA0912.1	11	1	+	8.397027914079759	1.6523917446674312	CAGCATTAATTACAGC
chr4	123422184	123422185	chr4:123422185:T:A	rs77325462	T	A	t	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	123507560	123507561	chr4:123507561:T:C	rs62323451	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	123565352	123565353	chr4:123565353:T:C	rs73844806	T	C	T	Hoxd3_MA0912.1	0	1	+	9.263833307685669	9.211327810307738	TTGAAGTAATGACTTT
chr4	123594356	123594357	chr4:123594357:G:C	rs2589836	G	C	C	Hoxd3_MA0912.1	4	1	-	8.8438144492049	10.421892359917981	TTGACGTAATTATACC
chr4	123599685	123599686	chr4:123599686:A:G	rs59791195	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	123649351	123649352	chr4:123649352:A:G	rs2589858	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr4	123891901	123891902	chr4:123891902:C:G	rs1433222	C	G	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	124637067	124637068	chr4:124637068:T:C	rs59106012	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	124637073	124637074	chr4:124637074:G:A	rs78168102	G	A	G	Hoxd3_MA0912.1	13	1	-	8.155727687192392	7.551490958680018	TACAGTTCATTACCCT
chr4	124760709	124760710	chr4:124760710:T:A	rs78381897	T	A	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	125047170	125047171	chr4:125047171:T:C	rs1603695	T	C	T	Hoxd3_MA0912.1	1	1	+	7.617310070799974	5.533249583263844	GTGAGCCAATTAAACC
chr4	125187920	125187921	chr4:125187921:T:C	rs7670534	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	125493303	125493304	chr4:125493304:A:G	rs10008986	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	125493304	125493305	chr4:125493305:T:G	rs12641803	T	G	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	125576760	125576761	chr4:125576761:T:C	rs1429900	T	C	C	Hoxd3_MA0912.1	0	1	+	9.589269864419979	9.536764367042048	TTAGATTAATTAAACC
chr4	125742256	125742257	chr4:125742257:C:G	rs62313851	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	125827053	125827054	chr4:125827054:A:C	rs77348922	A	C	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	125827064	125827065	chr4:125827065:A:T	rs11942958	A	T	A	Hoxd3_MA0912.1	4	1	+	11.36657078207176	11.36657078207176	TTGAATTAATTAAATT
chr4	125827074	125827075	chr4:125827075:T:C	rs9884548	T	C	T	Hoxd3_MA0912.1	14	1	+	11.36657078207176	11.93090722820405	TTGAATTAATTAAATT
chr4	126489265	126489266	chr4:126489266:T:A	rs937924	T	A	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	126695057	126695058	chr4:126695058:A:G	rs167504	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	126756511	126756512	chr4:126756512:A:T	rs62324222	A	T	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr4	126983747	126983748	chr4:126983748:T:C	rs62324481	T	C	T	Hoxd3_MA0912.1	15	1	+	8.784078669597019	8.00637410100901	CTGATTTCATTACAAT
chr4	127605366	127605367	chr4:127605367:C:A	rs60404814	C	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	128226759	128226760	chr4:128226760:T:A	rs11098951	T	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	128267884	128267885	chr4:128267885:T:C	rs11726595	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr4	128322817	128322818	chr4:128322818:C:G	rs9307606	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr4	128359128	128359129	chr4:128359129:C:T	rs117970859	C	T	C	Hoxd3_MA0912.1	12	1	+	8.69261056349935	7.485858643494488	TTGGCTTAATGACTGT
chr4	128544333	128544334	chr4:128544334:A:C	rs1032673	A	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	129034914	129034915	chr4:129034915:C:T	rs77218617	C	T	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	129365288	129365289	chr4:129365289:C:T	rs71613927	C	T	C	Hoxd3_MA0912.1	13	1	+	7.579653281169211	6.975416552656838	ATGAGCCAATTGCCGC
chr4	129800945	129800946	chr4:129800946:A:G	rs72675812	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	129893155	129893156	chr4:129893156:A:G	rs72615876	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	131338131	131338132	chr4:131338132:G:T	rs35810515	G	T	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr4	131534510	131534511	chr4:131534511:A:C	rs2036891	A	C	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	133106967	133106968	chr4:133106968:A:G	rs56176336	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr4	133590054	133590055	chr4:133590055:C:T	rs1911559	C	T	C	Hoxd3_MA0912.1	12	1	+	10.379391069271092	9.172639149266228	CTGAACTAATTGCCCT
chr4	134301664	134301665	chr4:134301665:A:T	rs10033808	A	T	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	134628256	134628257	chr4:134628257:G:A	rs887176092	G	A	g	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	135173519	135173520	chr4:135173520:T:G	rs10009456	T	G	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr4	135238995	135238996	chr4:135238996:G:A	rs114165607	G	A	g	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	135548900	135548901	chr4:135548901:A:G	rs6848619	A	G	G	Hoxd3_MA0912.1	15	1	+	9.78851621114946	10.629514838108676	TTGGTTTAATTAGCCA
chr4	135759506	135759507	chr4:135759507:T:A	rs76098491	T	A	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr4	135759517	135759518	chr4:135759518:T:C	rs74487272	T	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	136054389	136054390	chr4:136054390:A:T	rs13435860	A	T	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr4	136644559	136644560	chr4:136644560:C:T	rs13151030	C	T	C	Hoxd3_MA0912.1	14	1	+	9.825113924586786	9.260777478454495	CATGATTAATTACCCT
chr4	137082474	137082475	chr4:137082475:A:T	rs1198307841	A	T	a	Hoxd3_MA0912.1	14	1	-	9.904130522916873	9.348086274000583	CTATGTTAATTACTTT
chr4	137893158	137893159	chr4:137893159:A:T	rs6847536	A	T	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr4	138185093	138185094	chr4:138185094:A:T	rs187792445	A	T	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr4	138512691	138512692	chr4:138512692:G:A	rs299119	G	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	138794269	138794270	chr4:138794270:G:T	rs13125892	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	138857417	138857418	chr4:138857418:C:G	rs62322142	C	G	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	139208468	139208469	chr4:139208469:C:G	rs72724763	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	139256407	139256408	chr4:139256408:T:G	rs6536020	T	G	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr4	139628414	139628415	chr4:139628415:G:A	rs17050838	G	A	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	139666589	139666590	chr4:139666590:G:C	rs8192008	G	C	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	139672153	139672154	chr4:139672154:A:G	rs2602238	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	139743075	139743076	chr4:139743076:A:G	rs114881676	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	139809051	139809052	chr4:139809052:A:G	rs73854362	A	G	A	Hoxd3_MA0912.1	0	1	-	9.451849725685195	9.399344228307264	TTGTAGTAATTGCTCT
chr4	140092584	140092585	chr4:140092585:C:G	rs560657521	C	G	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	140790269	140790270	chr4:140790270:G:T	rs17006440	G	T	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	140864996	140864997	chr4:140864997:A:G	rs729242	A	G	A	Hoxd3_MA0912.1	11	1	+	9.348447178774014	7.5625212305930205	TGGAGGTAATTAAGCT
chr4	141091272	141091273	chr4:141091273:T:C	rs4956504	T	C	T	Hoxd3_MA0912.1	8	1	-	8.136379795512896	1.2478073359475346	CTTAGCTCATTAACTC
chr4	141154895	141154896	chr4:141154896:A:G	rs4956352	A	G	a	Hoxd3_MA0912.1	0	1	-	8.134649030609758	8.082143533231827	TGAAGGTAATTACCTC
chr4	141238320	141238321	chr4:141238321:T:C	rs1435128	T	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	141238356	141238357	chr4:141238357:C:T	rs1435127	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	141391677	141391678	chr4:141391678:A:G	rs151101256	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr4	141810268	141810269	chr4:141810269:T:C	rs6537075	T	C	.	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	141812867	141812868	chr4:141812868:T:A	rs75656254	T	A	.	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	141972150	141972151	chr4:141972151:C:T	rs6856442	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr4	142463694	142463695	chr4:142463695:C:G	rs34900920	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	142485679	142485680	chr4:142485680:A:G	rs3844178	A	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr4	142974433	142974434	chr4:142974434:G:A	rs78515166	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	143560157	143560158	chr4:143560158:A:G	rs77865740	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	143711350	143711351	chr4:143711351:G:A	rs10013005	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	143711354	143711355	chr4:143711355:A:G	rs10002640	A	G	A	Hoxd3_MA0912.1	13	1	-	9.979994650177709	10.584231378690083	ATGGTTTAATTAATAT
chr4	143990967	143990968	chr4:143990968:T:C	rs13110141	T	C	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	144291240	144291241	chr4:144291241:G:A	rs11100844	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	145391030	145391031	chr4:145391031:A:G	rs2120522	A	G	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	146106076	146106077	chr4:146106077:G:A	rs4835283	G	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	146325104	146325105	chr4:146325105:C:T	rs62327855	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr4	146465124	146465125	chr4:146465125:A:C	rs72729894	A	C	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr4	146646048	146646049	chr4:146646049:G:C	chr4:146646049:G:C	G	C	G	Hoxd3_MA0912.1	14	1	+	10.205427234473689	10.381842599758137	CTCAGCTAATTACTGT
chr4	147862676	147862677	chr4:147862677:A:T	rs79324443	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr4	147940685	147940686	chr4:147940686:A:G	rs2635268	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	149122674	149122675	chr4:149122675:G:A	rs10028420	G	A	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	149520396	149520397	chr4:149520397:G:A	rs72726119	G	A	G	Hoxd3_MA0912.1	14	1	-	9.838707314045369	9.274370867913078	CAGTAATAATTACCCT
chr4	149823483	149823484	chr4:149823484:T:C	rs114135063	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	150078157	150078158	chr4:150078158:C:T	rs756670075	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	150298484	150298485	chr4:150298485:A:C	rs76930340	A	C	A	Hoxd3_MA0912.1	2	1	-	8.88629505011721	10.203485619667955	CTTAAGTCATTACCGT
chr4	150569676	150569677	chr4:150569677:G:A	rs1504783	G	A	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr4	150578287	150578288	chr4:150578288:A:G	rs10022844	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	150939244	150939245	chr4:150939245:T:C	rs7657668	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	151148413	151148414	chr4:151148414:C:T	rs6846323	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr4	151371321	151371322	chr4:151371322:C:T	rs62327176	C	T	C	Hoxd3_MA0912.1	14	1	+	8.646889824321756	8.082553378189465	ATCTATTAATTACCCG
chr4	151887524	151887525	chr4:151887525:G:A	rs58843921	G	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	151992591	151992592	chr4:151992592:T:C	rs140365649	T	C	T	Hoxd3_MA0912.1	6	1	+	9.80640674830337	8.020480800122376	CTTGGCTAATTAGCTT
chr4	151992594	151992595	chr4:151992595:T:C	rs360935	T	C	T	Hoxd3_MA0912.1	9	1	+	9.80640674830337	2.9178342887380073	CTTGGCTAATTAGCTT
chr4	152356940	152356941	chr4:152356941:T:C	rs532387645	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	152416271	152416272	chr4:152416272:C:T	rs146885602	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	152951290	152951291	chr4:152951291:C:T	rs6836054	C	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	153083895	153083896	chr4:153083896:C:A	rs1516683	C	A	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	153249707	153249708	chr4:153249708:G:C	rs6817018	G	C	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr4	153349327	153349328	chr4:153349328:C:G	rs10018880	C	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	153374820	153374821	chr4:153374821:G:A	rs62324666	G	A	G	Hoxd3_MA0912.1	14	1	+	8.85697317276466	7.913007843000527	TGGTTATAATTAACGT
chr4	153491399	153491400	chr4:153491400:C:T	rs74537360	C	T	C	Hoxd3_MA0912.1	14	1	-	7.678173351599787	6.734208021835652	CACCTCTAATTACCGT
chr4	153988938	153988939	chr4:153988939:A:G	rs6827482	A	G	A	Hoxd3_MA0912.1	7	1	+	9.039057104070128	2.2593738614397014	CAGGACTAATTGACCT
chr4	154067989	154067990	chr4:154067990:C:T	rs76385476	C	T	c	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr4	154073501	154073502	chr4:154073502:G:A	rs116029165	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr4	154141758	154141759	chr4:154141759:T:G	rs10776528	T	G	T	Hoxd3_MA0912.1	15	1	+	8.950017613761323	8.126008477131629	ATGGATTAATGAAAGT
chr4	154317189	154317190	chr4:154317190:A:G	rs13111065	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr4	154632466	154632467	chr4:154632467:T:A	rs76322038	T	A	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr4	154751002	154751003	chr4:154751003:C:T	rs78441257	C	T	C	Hoxd3_MA0912.1	14	1	+	9.083679832687487	8.519343386555196	CTGACATAATTAGTCT
chr4	154802358	154802359	chr4:154802359:T:C	rs4696604	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr4	155047975	155047976	chr4:155047976:G:A	rs28366607	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	155048063	155048064	chr4:155048064:G:A	rs1869964	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	155209697	155209698	chr4:155209698:C:T	rs73855387	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	155651043	155651044	chr4:155651044:G:C	rs34924010	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr4	155651049	155651050	chr4:155651050:C:G	rs34765501	C	G	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	155805378	155805379	chr4:155805379:T:C	rs17313779	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	155946631	155946632	chr4:155946632:G:C	rs6816954	G	C	G	Hoxd3_MA0912.1	3	1	+	8.883861936812998	7.696942019140057	CTGGTGTAATGACTCC
chr4	156255592	156255593	chr4:156255593:G:A	rs4691319	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr4	156538356	156538357	chr4:156538357:T:C	rs114496637	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	156710505	156710506	chr4:156710506:T:A	rs9884264	T	A	T	Hoxd3_MA0912.1	12	1	-	9.034156278055635	7.827404358050771	CTCATTTAATTAACCA
chr4	156901755	156901756	chr4:156901756:C:G	rs62331505	C	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	159095387	159095388	chr4:159095388:G:C	rs75415318	G	C	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	160468611	160468612	chr4:160468612:A:G	rs62333080	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr4	160808437	160808438	chr4:160808438:C:T	rs3909236	C	T	C	Hoxd3_MA0912.1	14	1	+	10.364594902166784	9.800258456034493	TTTAAATAATTACCCT
chr4	160875210	160875211	chr4:160875211:A:G	rs74750699	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	160932196	160932197	chr4:160932197:G:A	rs7667359	G	A	A	Hoxd3_MA0912.1	0	1	-	11.5731912573361	11.625696754714031	CTGATGTAATTACAGT
chr4	161008642	161008643	chr4:161008643:C:T	rs75033603	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr4	161052869	161052870	chr4:161052870:G:T	rs13108949	G	T	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr4	162129238	162129239	chr4:162129239:T:G	rs75498149	T	G	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	162129240	162129241	chr4:162129241:C:A	rs72986905	C	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr4	162407329	162407330	chr4:162407330:C:T	rs12648329	C	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr4	162557909	162557910	chr4:162557910:C:A	rs7681482	C	A	-	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	162782930	162782931	chr4:162782931:G:A	rs9997394	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr4	162889358	162889359	chr4:162889359:T:G	rs1458143	T	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr4	163623009	163623010	chr4:163623010:T:C	rs541629397	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	163623010	163623011	chr4:163623011:A:T	rs564397441	A	T	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr4	163793774	163793775	chr4:163793775:T:C	rs7695742	T	C	T	Hoxd3_MA0912.1	9	1	+	10.600556069405652	3.7119836098402894	CTGTTCTAATTACCGG
chr4	163895962	163895963	chr4:163895963:A:C	rs72685666	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr4	164731540	164731541	chr4:164731541:C:T	rs6824758	C	T	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	164749274	164749275	chr4:164749275:C:A	rs28871390	C	A	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr4	164977349	164977350	chr4:164977350:C:G	rs56231925	C	G	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr4	165349076	165349077	chr4:165349077:G:T	rs72701634	G	T	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr4	165481758	165481759	chr4:165481759:T:C	rs72705403	T	C	T	Hoxd3_MA0912.1	9	1	+	8.041920487702635	1.153348028137273	TTGAAGTAATTGAGGG
chr4	165906652	165906653	chr4:165906653:T:A	rs7698885	T	A	T	Hoxd3_MA0912.1	12	1	-	9.72402557711526	8.517273657110396	CTGCAATAATTAATCT
chr4	166012638	166012639	chr4:166012639:C:T	rs1393857	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr4	166435645	166435646	chr4:166435646:G:A	rs577773798	G	A	G	Hoxd3_MA0912.1	5	1	-	7.8549916032869085	8.172313045173315	ATGGACTCATTACTGC
chr4	166533969	166533970	chr4:166533970:G:C	rs17691801	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	166996371	166996372	chr4:166996372:G:T	rs80199630	G	T	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	167623451	167623452	chr4:167623452:A:C	rs1518183	A	C	A	Hoxd3_MA0912.1	10	1	-	9.380023200893392	7.406080834712874	CTGTTTTCATTAACTT
chr4	167659125	167659126	chr4:167659126:C:T	rs7669390	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	167786921	167786922	chr4:167786922:C:G	rs13435902	C	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	168768364	168768365	chr4:168768365:T:C	rs17542688	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr4	169039365	169039366	chr4:169039366:G:A	rs62334891	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr4	169305453	169305454	chr4:169305454:T:C	rs4692707	T	C	T	Hoxd3_MA0912.1	13	1	+	7.945917955705247	8.550154684217619	TTGTGCCAATTAGTGC
chr4	169352055	169352056	chr4:169352056:C:T	rs114275582	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr4	169664279	169664280	chr4:169664280:C:A	rs191392767	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	170092681	170092682	chr4:170092682:C:T	rs2955256	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	170381436	170381437	chr4:170381437:A:G	rs6857665	A	G	a	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	170873035	170873036	chr4:170873036:C:T	rs1367998	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	171623198	171623199	chr4:171623199:T:C	rs1964604	T	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr4	172130103	172130104	chr4:172130104:C:T	rs28482366	C	T	C	Hoxd3_MA0912.1	14	1	+	11.19959692850599	10.635260482373699	TTGAGGTAATTATTCT
chr4	172348616	172348617	chr4:172348617:C:T	chr4:172348617:C:T	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	172597140	172597141	chr4:172597141:T:C	rs1455132	T	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	172776114	172776115	chr4:172776115:C:T	rs10029787	C	T	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr4	172951876	172951877	chr4:172951877:C:G	rs17059052	C	G	c	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	173106004	173106005	chr4:173106005:C:T	rs28709360	C	T	C	Hoxd3_MA0912.1	1	1	+	9.080832028001812	11.164892515537943	CCGATCTAATTACCGG
chr4	173244162	173244163	chr4:173244163:G:C	rs146790186	G	C	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	173510075	173510076	chr4:173510076:T:C	rs72992532	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	173562043	173562044	chr4:173562044:G:T	rs60932301	G	T	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	173685886	173685887	chr4:173685887:A:G	rs4530606	A	G	G	Hoxd3_MA0912.1	2	1	+	8.25112182794274	9.700956872099777	CTAGGCTAATTGCATT
chr4	174104290	174104291	chr4:174104291:C:T	rs11946672	C	T	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr4	174538336	174538337	chr4:174538337:C:T	rs76365297	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	174550689	174550690	chr4:174550690:C:T	rs78578475	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	174555949	174555950	chr4:174555950:T:G	rs10032848	T	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr4	174563823	174563824	chr4:174563824:C:A	rs17296454	C	A	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	175996466	175996467	chr4:175996467:T:C	rs56321856	T	C	T	Hoxd3_MA0912.1	1	1	+	9.021961804872067	6.937901317335935	TTATGCTAATTGACCT
chr4	176335547	176335548	chr4:176335548:T:C	rs10027831	T	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	176387515	176387516	chr4:176387516:A:G	rs6553951	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	176432952	176432953	chr4:176432953:T:C	rs79735915	T	C	T	Hoxd3_MA0912.1	1	1	+	7.98102578157633	5.8969652940402	GTGAGGTAATTGTCCT
chr4	176753033	176753034	chr4:176753034:A:G	rs140903782	A	G	A	Hoxd3_MA0912.1	9	1	-	9.255612073700236	2.3670396141348755	TTTAGTTAATTGCTGT
chr4	176836344	176836345	chr4:176836345:G:A	rs2333527	G	A	A	Hoxd3_MA0912.1	14	1	+	8.38101054066379	7.4370452108996545	AAGAGACAATTAACGT
chr4	176988621	176988622	chr4:176988622:A:T	rs10004906	A	T	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr4	176988624	176988625	chr4:176988625:T:A	rs28508322	T	A	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr4	177235064	177235065	chr4:177235065:T:A	rs115907906	T	A	T	Hoxd3_MA0912.1	11	1	-	10.491777685084019	6.154086623989977	CTGAGTTAATTATCTG
chr4	177263867	177263868	chr4:177263868:G:A	rs72702924	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	177298184	177298185	chr4:177298185:T:G	rs11935183	T	G	T	Hoxd3_MA0912.1	9	1	+	10.501094451286514	6.010417264519521	TTGCAGTAATTAAACT
chr4	177351593	177351594	chr4:177351594:G:A	rs1054753	G	A	G	Hoxd3_MA0912.1	13	1	-	9.472792582539753	8.86855585402738	TTTGTATAATTAACCC
chr4	178040123	178040124	chr4:178040124:G:A	rs1676175	G	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	178309987	178309988	chr4:178309988:G:T	rs4862460	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	179071740	179071741	chr4:179071741:A:G	rs72710786	A	G	G	Hoxd3_MA0912.1	3	1	+	9.7159723503916	9.601874599352575	ATGAGGTCATTACTCT
chr4	179183013	179183014	chr4:179183014:A:G	chr4:179183014:A:G	A	G	A	Hoxd3_MA0912.1	10	1	-	9.96427221075069	3.18458896812026	CTGAAATAATTACCCA
chr4	179590623	179590624	chr4:179590624:C:A	rs2716801	C	A	A	Hoxd3_MA0912.1	14	1	-	7.646056032235199	7.258134951387356	TTGAGGTAATGGAAGG
chr4	179610443	179610444	chr4:179610444:A:G	rs17775128	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	179728404	179728405	chr4:179728405:T:C	rs10001826	T	C	T	Hoxd3_MA0912.1	6	1	+	8.741436814848488	6.955510866667494	TTGGTCTAATGACCTG
chr4	179914753	179914754	chr4:179914754:G:C	rs143164336	G	C	G	Hoxd3_MA0912.1	5	1	-	6.4658865343023315	6.654412867983169	CTGACCTCATGACCCC
chr4	180041370	180041371	chr4:180041371:A:G	rs72707687	A	G	C	Hoxd3_MA0912.1	6	1	-	7.42151845131818	5.635592503137188	AAGGGGTCATTACTGC
chr4	180391437	180391438	chr4:180391438:G:A	rs6811443	G	A	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	180674421	180674422	chr4:180674422:T:C	rs965376	T	C	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	180674424	180674425	chr4:180674425:T:C	rs34661236	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr4	180887776	180887777	chr4:180887777:C:G	rs4558903	C	G	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr4	181026289	181026290	chr4:181026290:C:T	rs17070473	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr4	181083412	181083413	chr4:181083413:T:A	rs12499877	T	A	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr4	181514611	181514612	chr4:181514612:T:C	rs7689885	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr4	181637603	181637604	chr4:181637604:A:G	rs12510543	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	181660420	181660421	chr4:181660421:G:T	rs145590166	G	T	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr4	181693405	181693406	chr4:181693406:T:G	rs2309573	T	G	T	Hoxd3_MA0912.1	8	1	-	9.269422155714476	4.778744968947486	CAGTGGTAATTAACAC
chr4	182230895	182230896	chr4:182230896:C:T	rs78186567	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr4	182240133	182240134	chr4:182240134:A:C	rs7663302	A	C	A	Hoxd3_MA0912.1	7	1	+	9.656048377291377	7.682106011110859	TTGCCTTAATTAAACT
chr4	182691381	182691382	chr4:182691382:G:T	rs7694547	G	T	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr4	183280732	183280733	chr4:183280733:T:C	rs34842178	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr4	183280755	183280756	chr4:183280756:G:A	rs11132173	G	A	A	Hoxd3_MA0912.1	14	1	+	9.162867881474027	8.218902551709894	TTATGTTAATTGCCGT
chr4	183364119	183364120	chr4:183364120:C:T	rs34145465	C	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr4	183372308	183372309	chr4:183372309:G:A	rs6823282	G	A	G	Hoxd3_MA0912.1	6	1	-	7.597423900921315	9.38334984910231	AAGGGCCAATTAAACC
chr4	183372316	183372317	chr4:183372317:C:G	rs6822957	C	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr4	183403054	183403055	chr4:183403055:C:T	rs76183088	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr4	183440892	183440893	chr4:183440893:T:C	rs4862197	T	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	183494184	183494185	chr4:183494185:A:C	rs11723316	A	C	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	184280425	184280426	chr4:184280426:A:G	rs28582391	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr4	184280475	184280476	chr4:184280476:A:T	rs74804987	A	T	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	184321213	184321214	chr4:184321214:A:G	rs2310004	A	G	A	Hoxd3_MA0912.1	1	1	-	9.135750858965341	7.05169037142921	ATGCATTAATTAATCC
chr4	184385278	184385279	chr4:184385279:C:T	rs139092643	C	T	C	Hoxd3_MA0912.1	4	1	-	7.266315011306272	6.662078282793898	CTGCGTTCATTAGGCT
chr4	184988999	184989000	chr4:184989000:T:G	rs72709504	T	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr4	185221335	185221336	chr4:185221336:G:T	rs72706093	G	T	G	Hoxd3_MA0912.1	13	1	-	8.85588464412842	8.251647915616045	CTTTTTTAATTAGCCC
chr4	185236023	185236024	chr4:185236024:C:G	rs13118983	C	G	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	185538000	185538001	chr4:185538001:A:G	rs11132318	A	G	A	Hoxd3_MA0912.1	0	1	-	9.694092280441097	9.641586783063167	TTGTGCCAATTAACCC
chr4	185591908	185591909	chr4:185591909:C:T	rs10033502	C	T	C	Hoxd3_MA0912.1	0	1	-	8.68490153942957	10.005349334751873	GTGGTCTAATTAAACC
chr4	185716678	185716679	chr4:185716679:T:C	rs10022053	T	C	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr4	185716699	185716700	chr4:185716700:C:G	rs2030144	C	G	G	Hoxd3_MA0912.1	7	1	+	7.3807291302566815	2.574988253806773	CTGTGTTCATTGCACC
chr4	185716718	185716719	chr4:185716719:G:A	rs78577521	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr4	185778618	185778619	chr4:185778619:G:A	rs73873376	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr4	185781964	185781965	chr4:185781965:G:A	rs13109085	G	A	G	Hoxd3_MA0912.1	15	1	+	9.078079284148767	8.237080657189551	TTGGAGTAATTGATCG
chr4	185839306	185839307	chr4:185839307:G:A	rs35638116	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr4	186088949	186088950	chr4:186088950:C:T	rs4608848	C	T	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr4	186271326	186271327	chr4:186271327:T:C	rs2036914	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr4	186516160	186516161	chr4:186516161:G:A	rs7699670	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr4	186554020	186554021	chr4:186554021:A:G	rs7670161	A	G	A	Hoxd3_MA0912.1	9	1	-	9.240573745398176	2.3520012858328143	CTGGGTTAATTGAATC
chr4	186686472	186686473	chr4:186686473:G:C	rs327110	G	C	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr4	186700902	186700903	chr4:186700903:T:C	rs146801010	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr4	186700909	186700910	chr4:186700910:A:G	rs455219	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr4	186700914	186700915	chr4:186700915:C:T	rs455934	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr4	186984378	186984379	chr4:186984379:C:T	rs13142305	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr4	187128435	187128436	chr4:187128436:G:A	rs148521484	G	A	.	Hoxd3_MA0912.1	2	1	-	9.940127215863743	10.406411064006948	CTCGGGTAATTAACAT
chr4	187152746	187152747	chr4:187152747:G:C	rs10016251	G	C	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr4	187157490	187157491	chr4:187157491:A:G	rs28666788	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr4	187437780	187437781	chr4:187437781:G:T	rs3898495	G	T	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr4	187481059	187481060	chr4:187481060:G:C	rs76678839	G	C	G	Hoxd3_MA0912.1	5	1	+	8.090864869182772	7.902338535501933	ATGAGGTAATGACCTA
chr4	187560259	187560260	chr4:187560260:T:C	rs72710409	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr4	188113395	188113396	chr4:188113396:T:C	rs7664746	T	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr4	188113408	188113409	chr4:188113409:G:A	rs34827744	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr4	188171897	188171898	chr4:188171898:A:G	rs79477811	A	G	A	Hoxd3_MA0912.1	14	1	+	7.730659991022023	8.674625320786156	CAGGGCTCATTACAAT
chr4	188299351	188299352	chr4:188299352:T:C	rs6854549	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr4	188613373	188613374	chr4:188613374:T:C	rs79687577	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr4	188808196	188808197	chr4:188808197:T:C	rs62341235	T	C	t	Hoxd3_MA0912.1	23	0	+	0	0	.
chr4	189373648	189373649	chr4:189373649:A:G	rs67772211	A	G	G	Hoxd3_MA0912.1	1	1	-	9.425781051079946	7.341720563543818	CTGAGGTCATTAATGC
chr4	189494110	189494111	chr4:189494111:C:T	rs11722601	C	T	t	Hoxd3_MA0912.1	25	0	+	0	0	.
chr4	189567222	189567223	chr4:189567223:T:C	rs6827463	T	C	t	Hoxd3_MA0912.1	1	1	+	8.690742861876394	6.606682374340266	ATGATTCAATTACCTC
chr4	189567228	189567229	chr4:189567229:A:G	rs1817060	A	G	a	Hoxd3_MA0912.1	7	1	+	8.690742861876394	1.9110596192459672	ATGATTCAATTACCTC
chr5	30806	30807	chr5:30807:C:T	rs188114595	C	T	.	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	100059	100060	chr5:100060:C:G	rs72710820	C	G	C	Hoxd3_MA0912.1	0	1	+	8.390860745502046	6.406484315618939	CAGGAATAATTACCAC
chr5	102665	102666	chr5:102666:T:C	rs9313247	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr5	156064	156065	chr5:156065:G:A	rs6554829	G	A	g	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	309575	309576	chr5:309576:C:T	rs62330018	C	T	t	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	722756	722757	chr5:722757:C:T	rs2455348	C	T	c	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	776176	776177	chr5:776177:C:A	rs7734567	C	A	c	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	1123930	1123931	chr5:1123931:T:C	rs12653975	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	1125076	1125077	chr5:1125077:A:C	chr5:1125077:A:C	A	C	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr5	1228050	1228051	chr5:1228051:C:T	rs114674839	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr5	1296611	1296612	chr5:1296612:C:T	rs33977403	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	1470993	1470994	chr5:1470994:T:C	rs27054	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	1550632	1550633	chr5:1550633:G:A	rs140885584	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	1553153	1553154	chr5:1553154:G:A	rs114160841	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr5	1677111	1677112	chr5:1677112:G:A	rs56956003	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	2017580	2017581	chr5:2017581:G:T	rs10475128	G	T	G	Hoxd3_MA0912.1	5	1	+	7.805836404480811	7.934631512686383	GTGAGGCAATTAAACC
chr5	2047282	2047283	chr5:2047283:G:A	rs75261893	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	2112040	2112041	chr5:2112041:G:A	rs11745427	G	A	G	Hoxd3_MA0912.1	12	1	-	7.469321874546224	6.26256995454136	TAGGGTTCATTACGCC
chr5	2222576	2222577	chr5:2222577:G:C	rs10068362	G	C	C	Hoxd3_MA0912.1	1	1	-	7.992968823515997	7.992968823515997	TCTGGATAATTAACCC
chr5	2282990	2282991	chr5:2282991:C:T	rs2652154	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	2284684	2284685	chr5:2284685:G:A	rs2652149	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	2293385	2293386	chr5:2293386:C:T	rs222116	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	2355796	2355797	chr5:2355797:G:A	rs146362109	G	A	G	Hoxd3_MA0912.1	15	1	+	7.5215784205591385	6.6805797935999225	CTTGGCCAATTATCCG
chr5	3226404	3226405	chr5:3226405:T:C	rs1034082345	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	3269460	3269461	chr5:3269461:C:T	rs78685648	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	3269487	3269488	chr5:3269488:T:C	rs16871553	T	C	T	Hoxd3_MA0912.1	4	1	-	7.532543653900554	8.136780382412928	GCGTACTAATTACCCT
chr5	3285411	3285412	chr5:3285412:T:C	rs4546389	T	C	C	Hoxd3_MA0912.1	14	1	+	9.7054464174645	10.269782863596792	CGGAGGTAATTACATT
chr5	3308469	3308470	chr5:3308470:T:C	rs9313043	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	3425184	3425185	chr5:3425185:A:T	rs411929	A	T	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	3890215	3890216	chr5:3890216:G:T	rs594459	G	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	4022165	4022166	chr5:4022166:G:T	rs493476	G	T	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	4666050	4666051	chr5:4666051:A:G	rs7726500	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	4666056	4666057	chr5:4666057:G:A	rs66559905	G	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	4738058	4738059	chr5:4738059:T:C	rs6870892	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	4738108	4738109	chr5:4738109:T:C	rs1393120	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	4784597	4784598	chr5:4784598:A:G	rs6892078	A	G	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	4913114	4913115	chr5:4913115:A:G	rs6879578	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr5	5210602	5210603	chr5:5210603:T:C	rs6555337	T	C	t	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	5315237	5315238	chr5:5315238:T:C	rs66605734	T	C	T	Hoxd3_MA0912.1	11	1	-	8.196291324301141	6.410365376120147	CGGGGGCAATTACCCC
chr5	5315247	5315248	chr5:5315248:C:T	rs72726055	C	T	C	Hoxd3_MA0912.1	1	1	-	8.196291324301141	9.054115597675333	CGGGGGCAATTACCCC
chr5	5374801	5374802	chr5:5374802:T:C	rs16875476	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	5544401	5544402	chr5:5544402:G:A	rs113919855	G	A	g	Hoxd3_MA0912.1	3	1	+	7.83962028517324	7.953718036212262	TTCGGTTCATTACTCG
chr5	5585061	5585062	chr5:5585062:T:A	rs73037038	T	A	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	5596414	5596415	chr5:5596415:G:A	rs2434254	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	5883228	5883229	chr5:5883229:G:A	rs1032747	G	A	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	6302377	6302378	chr5:6302378:A:G	rs12513969	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	6390956	6390957	chr5:6390957:C:A	rs2062681	C	A	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	6400182	6400183	chr5:6400183:C:T	rs73046070	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	6400183	6400184	chr5:6400184:G:A	rs760680217	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr5	6594980	6594981	chr5:6594981:T:C	rs78411139	T	C	T	Hoxd3_MA0912.1	8	1	-	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr5	6692962	6692963	chr5:6692963:A:G	rs2014629	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr5	6861841	6861842	chr5:6861842:C:G	rs114738572	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	7445175	7445176	chr5:7445176:G:A	rs1025291	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	7667733	7667734	chr5:7667734:G:A	rs78040528	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	7852698	7852699	chr5:7852699:T:A	rs75874701	T	A	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr5	7888084	7888085	chr5:7888085:A:G	rs62342530	A	G	A	Hoxd3_MA0912.1	11	1	+	8.621094515878765	6.835168567697771	TTGATGTAATTATGGG
chr5	8019935	8019936	chr5:8019936:A:T	rs35820044	A	T	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr5	8146199	8146200	chr5:8146200:T:C	rs61593272	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	8366840	8366841	chr5:8366841:G:A	rs12520967	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	8416168	8416169	chr5:8416169:G:A	rs58944749	G	A	G	Hoxd3_MA0912.1	0	1	+	8.414201541919253	9.734649337241558	GGGAATTAATTAACCT
chr5	8523869	8523870	chr5:8523870:A:G	rs1002548	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	8637077	8637078	chr5:8637078:A:G	rs10040042	A	G	A	Hoxd3_MA0912.1	3	1	+	10.34022410249312	10.226126351454097	CTGACTTAATTAATTT
chr5	8814547	8814548	chr5:8814548:G:A	rs67252938	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	9534093	9534094	chr5:9534094:G:T	rs268551	G	T	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr5	9546876	9546877	chr5:9546877:T:C	rs1706986	T	C	C	Hoxd3_MA0912.1	5	1	+	8.147919576432336	7.830598134545928	CTGTGTCAATTATTCC
chr5	9546882	9546883	chr5:9546883:A:T	rs1614229	A	T	A	Hoxd3_MA0912.1	11	1	+	8.147919576432336	3.810228515338295	CTGTGTCAATTATTCC
chr5	10146838	10146839	chr5:10146839:G:A	rs1312026325	G	A	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	10311706	10311707	chr5:10311707:C:T	rs143044916	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	10316484	10316485	chr5:10316485:G:A	rs114037186	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	10567865	10567866	chr5:10567866:G:A	rs58194660	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	10715564	10715565	chr5:10715565:C:T	rs267982	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	10733636	10733637	chr5:10733637:A:G	rs382031	A	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	10827218	10827219	chr5:10827219:A:G	rs1438722	A	G	A	Hoxd3_MA0912.1	8	1	+	9.468488179172041	2.5799157196066798	GTGAGATAATTAATGT
chr5	10861533	10861534	chr5:10861534:T:A	rs11744182	T	A	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	11053688	11053689	chr5:11053689:T:A	rs1024617	T	A	T	Hoxd3_MA0912.1	9	1	+	9.570701898955361	5.08002471218837	TTTTGGTAATTAAAGC
chr5	11378704	11378705	chr5:11378705:T:C	rs9312768	T	C	c	Hoxd3_MA0912.1	12	1	-	9.028616833552396	8.061094602613366	CTGGGGTAATGAACGA
chr5	12013492	12013493	chr5:12013493:A:G	rs13171733	A	G	a	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	13276538	13276539	chr5:13276539:C:T	rs10462705	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	13347057	13347058	chr5:13347058:G:A	rs11958368	G	A	-	Hoxd3_MA0912.1	1	1	-	7.461458919604901	9.545519407141033	CCGGCCTAATTAGCTT
chr5	13643401	13643402	chr5:13643402:G:T	rs1445679	G	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	13779633	13779634	chr5:13779634:T:C	rs1502050	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	14190957	14190958	chr5:14190958:A:G	rs76717889	A	G	G	Hoxd3_MA0912.1	13	1	+	8.398781780840855	7.424940598640145	ATTAGGTAATGACACT
chr5	14190959	14190960	chr5:14190960:T:C	rs76014453	T	C	C	Hoxd3_MA0912.1	15	1	+	8.398781780840855	7.621077212252846	ATTAGGTAATGACACT
chr5	14264919	14264920	chr5:14264920:G:T	rs77239684	G	T	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	14600109	14600110	chr5:14600110:G:A	rs147131583	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	14910691	14910692	chr5:14910692:T:C	rs835130	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	14942473	14942474	chr5:14942474:G:T	chr5:14942474:G:T	G	T	G	Hoxd3_MA0912.1	14	1	-	10.31830873129131	9.197928036242729	TTGGAGTCATTACCCT
chr5	14944244	14944245	chr5:14944245:C:T	rs115640671	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	16427964	16427965	chr5:16427965:T:C	rs7726000	T	C	T	Hoxd3_MA0912.1	15	1	+	8.412912959373728	7.635208390785719	CAGTGGTCATTAATGT
chr5	16587213	16587214	chr5:16587214:C:A	rs2592013	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	16587215	16587216	chr5:16587216:G:T	rs2560824	G	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr5	16794109	16794110	chr5:16794110:C:A	rs58009555	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	16981240	16981241	chr5:16981241:C:G	rs12517442	C	G	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr5	17199432	17199433	chr5:17199433:C:T	rs2929721	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	17199433	17199434	chr5:17199434:A:G	rs2929722	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	17219166	17219167	chr5:17219167:A:G	rs1374513533	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	17219169	17219170	chr5:17219170:G:A	rs1540600	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr5	17278751	17278752	chr5:17278752:T:C	rs7728278	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	17352489	17352490	chr5:17352490:G:A	rs57275523	G	A	G	Hoxd3_MA0912.1	2	1	-	8.086593118593996	8.5528769667372	CTCGGCTAATTAACAA
chr5	17415087	17415088	chr5:17415088:G:A	rs17658764	G	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr5	17503841	17503842	chr5:17503842:C:T	rs1828450	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	17890131	17890132	chr5:17890132:A:G	rs7707189	A	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	17988734	17988735	chr5:17988735:C:T	rs692419	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	18143431	18143432	chr5:18143432:G:A	rs17547230	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	18437808	18437809	chr5:18437809:G:T	rs62353094	G	T	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	18491723	18491724	chr5:18491724:C:A	rs75206954	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr5	18985591	18985592	chr5:18985592:G:C	rs10037119	G	C	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	18985628	18985629	chr5:18985629:C:T	rs11747098	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	18985888	18985889	chr5:18985889:A:G	rs10035187	A	G	A	Hoxd3_MA0912.1	8	1	+	8.78209607590797	1.8935236163426086	TTGGGTTAATGAATCA
chr5	19301410	19301411	chr5:19301411:C:T	rs60325089	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	19531824	19531825	chr5:19531825:G:A	rs2387872	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr5	19790974	19790975	chr5:19790975:C:G	rs10473158	C	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	20437451	20437452	chr5:20437452:G:C	rs13355121	G	C	G	Hoxd3_MA0912.1	3	1	+	10.009258462140037	8.822338544467097	CTAGAGTAATTAATGT
chr5	21141035	21141036	chr5:21141036:G:C	rs1697924	G	C	g	Hoxd3_MA0912.1	22	0	-	0	0	.
chr5	21340438	21340439	chr5:21340439:C:T	rs144033499	C	T	.	Hoxd3_MA0912.1	3	1	-	8.810372120783848	8.924469871822872	TTCGGATAATTAAGCT
chr5	21918496	21918497	chr5:21918497:T:C	rs13162958	T	C	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	22619325	22619326	chr5:22619326:G:T	rs72637722	G	T	G	Hoxd3_MA0912.1	11	1	+	7.2533120179241966	4.701546905011149	CTGAGCCAATTGCCAG
chr5	22666622	22666623	chr5:22666623:A:T	rs10064006	A	T	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	22935435	22935436	chr5:22935436:C:T	rs2356428	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	23008134	23008135	chr5:23008135:G:A	rs2680788	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	23013789	23013790	chr5:23013790:T:G	rs72750648	T	G	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	23390249	23390250	chr5:23390250:G:A	rs35648737	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr5	23428889	23428890	chr5:23428890:C:T	rs10076019	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr5	23738504	23738505	chr5:23738505:T:A	rs4701388	T	A	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	23820751	23820752	chr5:23820752:C:T	rs7705043	C	T	c	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	24246068	24246069	chr5:24246069:T:C	rs4557371	T	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	24259122	24259123	chr5:24259123:G:A	rs4289533	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	24515793	24515794	chr5:24515794:T:A	rs62349564	T	A	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	24538655	24538656	chr5:24538656:G:T	rs138554938	G	T	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr5	27287522	27287523	chr5:27287523:A:G	rs147949780	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr5	27368189	27368190	chr5:27368190:G:A	rs73065973	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	28457220	28457221	chr5:28457221:G:C	rs72752481	G	C	G	Hoxd3_MA0912.1	3	1	+	8.66951032230352	7.482590404630578	ATGGGGCAATTACAAT
chr5	28821012	28821013	chr5:28821013:T:C	rs1910074	T	C	C	Hoxd3_MA0912.1	10	1	+	9.91673573791472	3.1370524952842924	TTAATTTAATTACATT
chr5	29092247	29092248	chr5:29092248:G:A	rs251057	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr5	29642813	29642814	chr5:29642814:G:A	rs139140492	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	30750288	30750289	chr5:30750289:T:C	rs904750	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	30933288	30933289	chr5:30933289:G:C	rs72745823	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr5	31424653	31424654	chr5:31424654:T:C	rs17485323	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	31682579	31682580	chr5:31682580:C:T	rs39791	C	T	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	32028542	32028543	chr5:32028543:C:G	rs4333331	C	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr5	32028580	32028581	chr5:32028581:C:T	rs4642384	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	32049103	32049104	chr5:32049104:A:G	rs403457	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	32489954	32489955	chr5:32489955:T:G	rs146494321	T	G	T	Hoxd3_MA0912.1	10	1	+	10.173141208580276	8.199198842399756	CTGGGATAATTACTTC
chr5	32489975	32489976	chr5:32489976:C:G	rs116527549	C	G	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	32531141	32531142	chr5:32531142:G:A	rs185382406	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	32531176	32531177	chr5:32531177:T:G	rs115324469	T	G	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	33517132	33517133	chr5:33517133:C:T	rs13178888	C	T	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr5	33688926	33688927	chr5:33688927:C:T	rs67600960	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	33709190	33709191	chr5:33709191:A:G	rs12515646	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	33824662	33824663	chr5:33824663:G:A	rs57083392	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	33994837	33994838	chr5:33994838:G:C	rs840409	G	C	G	Hoxd3_MA0912.1	2	1	+	8.532382783110318	6.748908365416369	TTGGAGCAATGACCCT
chr5	34466047	34466048	chr5:34466048:G:A	rs7732256	G	A	G	Hoxd3_MA0912.1	11	1	+	9.666938660874157	11.452864609055151	CTGAGATAATTGATGT
chr5	34504027	34504028	chr5:34504028:A:G	rs114504825	A	G	A	Hoxd3_MA0912.1	9	1	-	7.985494311480186	1.0969218519148234	ATGCCTTAATTACTGC
chr5	34539571	34539572	chr5:34539572:G:A	rs1874453	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	34597520	34597521	chr5:34597521:T:C	rs11950090	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	34604294	34604295	chr5:34604295:G:A	rs11738244	G	A	G	Hoxd3_MA0912.1	0	1	-	9.977350589485827	10.029856086863758	CAGAGGTAATTAAGGT
chr5	34610412	34610413	chr5:34610413:C:T	rs6871180	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	34610457	34610458	chr5:34610458:C:T	rs6871200	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	34628324	34628325	chr5:34628325:T:C	rs452688	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	34663724	34663725	chr5:34663725:C:T	rs9292558	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	34743804	34743805	chr5:34743805:G:A	rs114416999	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	35068145	35068146	chr5:35068146:G:C	rs78373811	G	C	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	35146762	35146763	chr5:35146763:C:T	rs1587605	C	T	T	Hoxd3_MA0912.1	13	1	-	7.864653360806313	8.838494543007023	CCTGGGTAATTAAGCT
chr5	35287512	35287513	chr5:35287513:T:G	rs72736816	T	G	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	35438827	35438828	chr5:35438828:A:G	rs284698	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	35649562	35649563	chr5:35649563:T:G	rs80047215	T	G	T	Hoxd3_MA0912.1	7	1	-	7.969030868476294	5.995088502295776	CTTCCCTAATTACTCT
chr5	35766078	35766079	chr5:35766079:T:C	rs6888729	T	C	t	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	35779833	35779834	chr5:35779834:C:T	rs11741496	C	T	C	Hoxd3_MA0912.1	14	1	+	8.76967979370665	8.20534334757436	CTTAATTAATTAGTCG
chr5	36243401	36243402	chr5:36243402:T:C	rs11746720	T	C	T	Hoxd3_MA0912.1	4	1	-	8.798305430509089	9.402542159021463	ATGGATCAATTAACAT
chr5	36258889	36258890	chr5:36258890:T:C	rs73081933	T	C	T	Hoxd3_MA0912.1	10	1	+	9.411868838332062	2.632185595701634	CTGAGCTAATTGGTCT
chr5	36302167	36302168	chr5:36302168:A:G	rs73751633	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	36404554	36404555	chr5:36404555:C:T	rs6888731	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	36721189	36721190	chr5:36721190:T:C	rs16903296	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	36730901	36730902	chr5:36730902:A:G	rs245674	A	G	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	36732459	36732460	chr5:36732460:A:G	rs245672	A	G	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	36745098	36745099	chr5:36745099:G:C	rs36670	G	C	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	37413097	37413098	chr5:37413098:G:A	rs2056872	G	A	A	Hoxd3_MA0912.1	4	1	-	8.871095029086586	9.844936211287294	CAGGCGTAATTAAATT
chr5	37413101	37413102	chr5:37413102:G:A	rs554639671	G	A	G	Hoxd3_MA0912.1	0	1	-	8.871095029086586	8.923600526464517	CAGGCGTAATTAAATT
chr5	37413109	37413110	chr5:37413110:A:G	chr5:37413110:A:G	A	G	a	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	37619789	37619790	chr5:37619790:C:T	rs7713017	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	37723802	37723803	chr5:37723803:A:G	rs149602126	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr5	37785559	37785560	chr5:37785560:G:C	rs62358928	G	C	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	37849585	37849586	chr5:37849586:G:A	rs1862573	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	38052941	38052942	chr5:38052942:G:A	rs270540	G	A	G	Hoxd3_MA0912.1	1	1	-	8.940982758291094	11.025043245827225	CCGAAATAATTAAACT
chr5	38400480	38400481	chr5:38400481:C:T	rs17341241	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	38651898	38651899	chr5:38651899:T:C	rs143476323	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr5	38752888	38752889	chr5:38752889:G:A	rs16867695	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	38913082	38913083	chr5:38913083:T:C	rs9632406	T	C	T	Hoxd3_MA0912.1	6	1	+	9.361002892577064	7.57507694439607	CAGACCTAATTAAACT
chr5	39219952	39219953	chr5:39219953:T:C	rs13188259	T	C	T	Hoxd3_MA0912.1	8	1	-	7.695724760679646	0.8071523011142829	CAGGTGCAATTAGCTT
chr5	39410507	39410508	chr5:39410508:T:C	rs3849762	T	C	T	Hoxd3_MA0912.1	12	1	-	9.545498973741825	8.577976742802795	TTTGTTTAATTAATGC
chr5	39446915	39446916	chr5:39446916:A:C	rs3842976	A	C	A	Hoxd3_MA0912.1	15	1	+	9.124110527326604	10.011413722327505	TTGAGTCAATTAACTA
chr5	39468990	39468991	chr5:39468991:A:G	rs6451426	A	G	A	Hoxd3_MA0912.1	12	1	+	10.87146848232787	9.90394625138884	CTGAGCTAATTAACAC
chr5	39907054	39907055	chr5:39907055:T:G	rs1113439	T	G	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	40226956	40226957	chr5:40226957:T:C	rs353370	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	40318536	40318537	chr5:40318537:T:C	rs7716277	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr5	40323315	40323316	chr5:40323316:A:G	rs348596	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	40881602	40881603	chr5:40881603:G:T	rs9292787	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	40992121	40992122	chr5:40992122:G:A	rs12189270	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	41279298	41279299	chr5:41279299:A:C	rs6894579	A	C	C	Hoxd3_MA0912.1	13	1	-	8.603441695933636	7.629600513732926	CTGCATTAATGACTCT
chr5	41793729	41793730	chr5:41793730:C:T	rs34071445	C	T	C	Hoxd3_MA0912.1	3	1	-	8.954302497685454	9.068400248724476	AAGGGCTAATTATACT
chr5	42109373	42109374	chr5:42109374:A:G	rs275017	A	G	a	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	42187211	42187212	chr5:42187212:C:T	rs1393017	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	42189797	42189798	chr5:42189798:C:G	rs10079521	C	G	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	42288122	42288123	chr5:42288123:T:C	rs6872878	T	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	42367157	42367158	chr5:42367158:G:C	rs35585211	G	C	G	Hoxd3_MA0912.1	3	1	+	8.921326130152831	7.7344062124798905	TTGGATTAATTAGGGC
chr5	42390302	42390303	chr5:42390303:G:A	rs4866892	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	42621996	42621997	chr5:42621997:T:C	rs1031889346	T	C	T	Hoxd3_MA0912.1	13	1	-	9.329688854810719	8.355847672610011	GTGAATTAATTACATT
chr5	42666001	42666002	chr5:42666002:T:C	rs4419597	T	C	-	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	42994767	42994768	chr5:42994768:T:A	rs1460778065	T	A	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	43121808	43121809	chr5:43121809:C:T	rs946045073	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	43298454	43298455	chr5:43298455:C:T	rs35239179	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	43950983	43950984	chr5:43950984:A:G	rs57717350	A	G	A	Hoxd3_MA0912.1	4	1	-	10.476668810057388	9.50282762785668	ATGATTTAATTACCTC
chr5	43981739	43981740	chr5:43981740:G:A	rs576372863	G	A	G	Hoxd3_MA0912.1	14	1	+	6.453519171117099	5.509553841352965	CAGTGGTAATGGCCGC
chr5	44774148	44774149	chr5:44774149:A:G	rs17322315	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	45344224	45344225	chr5:45344225:G:A	rs73099472	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	45879495	45879496	chr5:45879496:T:C	rs6451827	T	C	.	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	50449497	50449498	chr5:50449498:G:A	rs34433187	G	A	g	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	50450488	50450489	chr5:50450489:A:G	rs7720960	A	G	N	Hoxd3_MA0912.1	5	1	+	7.392028406512408	8.116591783305731	CTGGGACAATGAGCCT
chr5	50984892	50984893	chr5:50984893:C:T	rs72758266	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	51271931	51271932	chr5:51271932:A:G	rs9291726	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	51395977	51395978	chr5:51395978:G:C	rs190413161	G	C	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	51559423	51559424	chr5:51559424:C:G	rs16879007	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	52402297	52402298	chr5:52402298:C:T	rs2961728	C	T	C	Hoxd3_MA0912.1	13	1	+	10.045067194739168	9.440830466226794	CTTAATTAATTACCAT
chr5	52761125	52761126	chr5:52761126:C:T	rs28445978	C	T	c	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr5	52775762	52775763	chr5:52775763:T:C	rs1363958	T	C	T	Hoxd3_MA0912.1	7	1	-	8.409705261919024	1.6300220192885964	CAGAGTTAATTGACCA
chr5	52947028	52947029	chr5:52947029:A:G	rs79705105	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr5	53032501	53032502	chr5:53032502:A:C	rs186686495	A	C	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr5	53343216	53343217	chr5:53343217:A:G	rs16881317	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	53365176	53365177	chr5:53365177:T:C	rs66788870	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	53507291	53507292	chr5:53507292:C:A	rs1582554	C	A	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	53645710	53645711	chr5:53645711:A:G	rs42565	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr5	54116240	54116241	chr5:54116241:T:G	rs78718938	T	G	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr5	54250031	54250032	chr5:54250032:A:G	rs111492214	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	54483884	54483885	chr5:54483885:A:G	rs6450210	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	54558059	54558060	chr5:54558060:A:G	rs72750058	A	G	a	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	54660518	54660519	chr5:54660519:C:T	rs7730054	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr5	54660522	54660523	chr5:54660523:T:A	rs11747235	T	A	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	54702379	54702380	chr5:54702380:T:C	rs4865583	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	54874332	54874333	chr5:54874333:C:T	rs1560165	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	55621586	55621587	chr5:55621587:C:T	rs34371390	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	56325687	56325688	chr5:56325688:G:A	rs158489	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr5	56411991	56411992	chr5:56411992:C:A	rs72752298	C	A	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	56516146	56516147	chr5:56516147:T:A	rs192251745	T	A	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	56534308	56534309	chr5:56534309:G:A	rs180796683	G	A	G	Hoxd3_MA0912.1	3	1	+	7.293377980624453	7.407475731663477	CTCGGCTCATTAATGG
chr5	56540682	56540683	chr5:56540683:A:G	rs6861239	A	G	A	Hoxd3_MA0912.1	6	1	-	9.397403444876389	7.611477496695397	CTGGGATAATTAGGGT
chr5	56974353	56974354	chr5:56974354:T:G	rs2662015	T	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	57300861	57300862	chr5:57300862:G:A	rs187621	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	57327933	57327934	chr5:57327934:C:T	rs1363162	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	57486631	57486632	chr5:57486632:T:G	rs11955916	T	G	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr5	57587410	57587411	chr5:57587411:T:C	rs7708477	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	58268813	58268814	chr5:58268814:T:C	rs72755740	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr5	58507801	58507802	chr5:58507802:G:C	rs11748206	G	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	58648176	58648177	chr5:58648177:A:G	rs1019469	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr5	58746628	58746629	chr5:58746629:T:A	rs751735654	T	A	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	58766060	58766061	chr5:58766061:G:A	rs292960	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr5	58827939	58827940	chr5:58827940:G:C	rs1400219	G	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	58853598	58853599	chr5:58853599:T:C	rs295674	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	58889301	58889302	chr5:58889302:G:A	rs72764018	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	58968845	58968846	chr5:58968846:C:T	rs13185339	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	59103373	59103374	chr5:59103374:A:G	rs6865647	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	59127482	59127483	chr5:59127483:T:C	rs186314239	T	C	t	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	59173665	59173666	chr5:59173666:C:T	rs716908	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	59336720	59336721	chr5:59336721:A:G	rs35260	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	59360729	59360730	chr5:59360730:T:C	rs35285	T	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	59751398	59751399	chr5:59751399:T:C	rs12520158	T	C	T	Hoxd3_MA0912.1	0	1	+	9.713562087097625	9.661056589719694	TTGGTCTAATTGAACT
chr5	59758318	59758319	chr5:59758319:G:A	rs13177163	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	59829461	59829462	chr5:59829462:C:T	rs7731666	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	59969670	59969671	chr5:59969671:A:G	rs1435081	A	G	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	60115217	60115218	chr5:60115218:C:T	rs13156662	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	61123549	61123550	chr5:61123550:T:C	rs13190305	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	61280450	61280451	chr5:61280451:C:T	rs10041973	C	T	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	61311210	61311211	chr5:61311211:G:A	rs190708458	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	61311245	61311246	chr5:61311246:G:A	rs545257925	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	61330667	61330668	chr5:61330668:A:G	chr5:61330668:A:G	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	61330678	61330679	chr5:61330679:C:G	rs112045457	C	G	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	61330684	61330685	chr5:61330685:G:A	rs995979449	G	A	G	Hoxd3_MA0912.1	13	1	-	9.328441129103389	8.724204400591015	CAGACTTAATTACCGC
chr5	61675239	61675240	chr5:61675240:C:T	rs564054181	C	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	61675291	61675292	chr5:61675292:G:A	rs12518552	G	A	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	61805147	61805148	chr5:61805148:A:G	rs59740657	A	G	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	61811632	61811633	chr5:61811633:G:T	rs6449559	G	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	62089078	62089079	chr5:62089079:A:C	rs969752	A	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr5	63263638	63263639	chr5:63263639:T:C	rs460949	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	63650321	63650322	chr5:63650322:C:A	rs1566780	C	A	A	Hoxd3_MA0912.1	13	1	+	8.707242594190468	8.103005865678096	CTAGGACAATTAACGT
chr5	63960163	63960164	chr5:63960164:A:G	rs878567	A	G	G	Hoxd3_MA0912.1	11	1	+	7.677328052315043	5.89140210413405	AAGAGGCAATTACTGG
chr5	64108916	64108917	chr5:64108917:C:T	rs421980	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	65136324	65136325	chr5:65136325:G:A	rs186849296	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	65751721	65751722	chr5:65751722:C:T	rs252623	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	65812387	65812388	chr5:65812388:A:G	rs2254485	A	G	G	Hoxd3_MA0912.1	1	1	-	8.410141853526078	6.326081365989948	CTGGATTCATTATCCC
chr5	66230676	66230677	chr5:66230677:A:G	rs253224	A	G	A	Hoxd3_MA0912.1	7	1	+	8.692312316990959	1.912629074360531	TTTGGCTAATTAAGAT
chr5	66344811	66344812	chr5:66344812:A:G	rs10471322	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	66443610	66443611	chr5:66443611:T:C	rs10514995	T	C	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr5	66532452	66532453	chr5:66532453:C:T	rs73764023	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	66564399	66564400	chr5:66564400:C:T	rs13183635	C	T	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	67004689	67004690	chr5:67004690:A:G	rs116778135	A	G	A	Hoxd3_MA0912.1	3	1	+	9.789716839642152	9.67561908860313	CTCATGTAATTACTGT
chr5	67020257	67020258	chr5:67020258:G:A	rs77581244	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	67020275	67020276	chr5:67020276:A:T	rs73115751	A	T	A	Hoxd3_MA0912.1	0	1	+	9.373049967391955	10.089484099330692	ATGAATTAATTACTGA
chr5	67253073	67253074	chr5:67253074:T:C	rs2888179	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	67266036	67266037	chr5:67266037:G:A	rs73114212	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	67362430	67362431	chr5:67362431:A:T	rs114438847	A	T	A	Hoxd3_MA0912.1	8	1	+	10.31830873129131	5.827631544524319	TTGGGGTAATGACTCT
chr5	67514068	67514069	chr5:67514069:T:C	rs72765070	T	C	T	Hoxd3_MA0912.1	10	1	+	8.690699504291777	1.9110162616613484	TATCATTAATTACCCT
chr5	67623560	67623561	chr5:67623561:C:G	rs74381621	C	G	C	Hoxd3_MA0912.1	3	1	-	9.08792277731726	7.90100285964432	TTAGAGTAATTAAGGT
chr5	68177544	68177545	chr5:68177545:G:A	rs73124561	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	68711975	68711976	chr5:68711976:C:T	rs246973	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	68850206	68850207	chr5:68850207:T:A	rs62356093	T	A	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	69188781	69188782	chr5:69188782:T:A	rs57047253	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	69217596	69217597	chr5:69217597:T:G	rs111322584	T	G	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	69289242	69289243	chr5:69289243:C:T	rs72767873	C	T	c	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	69348689	69348690	chr5:69348690:T:A	rs10055160	T	A	T	Hoxd3_MA0912.1	15	1	+	9.996874715143084	8.331866951554174	CTTAATTAATTAATTT
chr5	71704282	71704283	chr5:71704283:C:T	rs16871210	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr5	71834760	71834761	chr5:71834761:C:G	rs933390219	C	G	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	71886405	71886406	chr5:71886406:A:C	rs57169300	A	C	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	71905082	71905083	chr5:71905083:A:G	rs10515110	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	72107891	72107892	chr5:72107892:G:C	rs6894541	G	C	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	72130342	72130343	chr5:72130343:A:G	rs533057810	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	72130351	72130352	chr5:72130352:G:A	rs1217375586	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr5	72130391	72130392	chr5:72130392:T:A	rs75920759	T	A	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	72564782	72564783	chr5:72564783:A:C	rs7734870	A	C	C	Hoxd3_MA0912.1	14	1	-	8.908703725587877	9.29662480643572	CTGGTCTCATTAAATT
chr5	73182657	73182658	chr5:73182658:T:A	rs6891055	T	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	73389161	73389162	chr5:73389162:C:T	rs80288411	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	73525712	73525713	chr5:73525713:T:C	rs142749649	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr5	73763894	73763895	chr5:73763895:C:G	rs73116591	C	G	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	73818929	73818930	chr5:73818930:T:A	rs6453024	T	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	73864289	73864290	chr5:73864290:G:C	rs2931435	G	C	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	73917983	73917984	chr5:73917984:G:T	rs549174283	G	T	G	Hoxd3_MA0912.1	4	1	+	8.175350271230391	7.571113542718016	ATGGGGTAATGATCCG
chr5	74128977	74128978	chr5:74128978:A:G	rs72776344	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr5	74200698	74200699	chr5:74200699:G:C	rs75527168	G	C	G	Hoxd3_MA0912.1	2	1	+	7.918676409021547	6.1352019913276	CAGGACTAATTGACAT
chr5	74202907	74202908	chr5:74202908:G:C	rs158818	G	C	G	Hoxd3_MA0912.1	12	1	-	9.44290080017398	8.47537856923495	ATGGGCTAATTACAAG
chr5	74237155	74237156	chr5:74237156:G:C	rs1841442	G	C	C	Hoxd3_MA0912.1	4	1	+	8.186627986676305	6.6085500759632225	TGGGGTTAATGAAAGT
chr5	74257954	74257955	chr5:74257955:C:T	chr5:74257955:C:T	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	74336431	74336432	chr5:74336432:T:C	rs7715713	T	C	T	Hoxd3_MA0912.1	8	1	-	8.399102309031123	1.5105298494657602	AGGATGTAATTATCCT
chr5	74336449	74336450	chr5:74336450:G:A	rs75535913	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	74336455	74336456	chr5:74336456:T:C	rs7715825	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr5	74359807	74359808	chr5:74359808:C:T	rs453124	C	T	c	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	74394523	74394524	chr5:74394524:A:G	rs10065639	A	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	74413266	74413267	chr5:74413267:C:T	rs61543428	C	T	C	Hoxd3_MA0912.1	12	1	+	8.895435021622392	7.688683101617529	TTGAGATAATTGCTGG
chr5	74560183	74560184	chr5:74560184:T:C	rs1428557	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	74592324	74592325	chr5:74592325:G:A	rs76733847	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	74611278	74611279	chr5:74611279:T:A	rs767015800	T	A	T	Hoxd3_MA0912.1	11	1	-	7.957711025158452	3.62001996406441	ATGTAGCAATTACTCC
chr5	75021453	75021454	chr5:75021454:G:C	rs4492095	G	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	75492296	75492297	chr5:75492297:A:C	rs189648622	A	C	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	76116592	76116593	chr5:76116593:C:T	rs767590	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	76116596	76116597	chr5:76116597:C:G	rs73764475	C	G	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	76231096	76231097	chr5:76231097:G:A	rs11750299	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	76304325	76304326	chr5:76304326:A:G	rs246812	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	76424823	76424824	chr5:76424824:G:A	rs10077372	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	76704151	76704152	chr5:76704152:T:C	rs3797451	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr5	76875237	76875238	chr5:76875238:G:A	rs1320309	G	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	76884060	76884061	chr5:76884061:G:A	rs62363087	G	A	g	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	76986963	76986964	chr5:76986964:G:A	rs7733117	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	76986978	76986979	chr5:76986979:C:T	rs32903	C	T	C	Hoxd3_MA0912.1	14	1	+	10.077276900232542	9.512940454100251	CTGGGCTAATGACACT
chr5	77086388	77086389	chr5:77086389:A:G	rs60085832	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	77620726	77620727	chr5:77620727:T:A	rs56820959	T	A	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	77704248	77704249	chr5:77704249:C:A	rs13174129	C	A	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	77770522	77770523	chr5:77770523:C:T	rs35468303	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	77861340	77861341	chr5:77861341:G:T	rs6863618	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr5	78050843	78050844	chr5:78050844:T:C	rs252799	T	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	78113017	78113018	chr5:78113018:A:C	rs41132	A	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	78320392	78320393	chr5:78320393:A:G	rs13175253	A	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	78519481	78519482	chr5:78519482:G:C	rs2114977	G	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr5	78539120	78539121	chr5:78539121:G:A	rs72760985	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	78746591	78746592	chr5:78746592:G:A	rs16875865	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	78887437	78887438	chr5:78887438:G:A	rs10462561	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	78887492	78887493	chr5:78887493:A:G	rs337886	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	78912973	78912974	chr5:78912974:A:C	rs10474569	A	C	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	78977724	78977725	chr5:78977725:C:A	rs4470743	C	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	79031395	79031396	chr5:79031396:G:T	rs116236157	G	T	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	79455359	79455360	chr5:79455360:T:C	rs6864220	T	C	T	Hoxd3_MA0912.1	11	1	-	8.690742861876394	6.904816913695401	ATGATTCAATTACCTC
chr5	79560909	79560910	chr5:79560910:A:T	rs56018035	A	T	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	79803174	79803175	chr5:79803175:C:T	rs259067	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	80252454	80252455	chr5:80252455:C:T	rs16877662	C	T	C	Hoxd3_MA0912.1	13	1	+	10.372181010253609	9.767944281741235	CTGTGTTCATTACCGT
chr5	80400585	80400586	chr5:80400586:A:G	rs114012267	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	80565623	80565624	chr5:80565624:T:G	rs249221	T	G	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	80961289	80961290	chr5:80961290:C:T	rs888819	C	T	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	81402530	81402531	chr5:81402531:G:A	rs4703521	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	81554272	81554273	chr5:81554273:A:C	rs11954000	A	C	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	81964320	81964321	chr5:81964321:G:A	rs532216689	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	82275215	82275216	chr5:82275216:T:C	rs76062650	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	82279229	82279230	chr5:82279230:C:G	rs3756682	C	G	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	82410066	82410067	chr5:82410067:T:C	rs224953	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	82419867	82419868	chr5:82419868:G:A	rs16899575	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	82655464	82655465	chr5:82655465:T:C	rs16899808	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	83138721	83138722	chr5:83138722:A:C	rs10037501	A	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr5	83368322	83368323	chr5:83368323:A:G	rs77410894	A	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	83549669	83549670	chr5:83549670:G:T	rs3852186	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr5	83946322	83946323	chr5:83946323:G:A	rs4612038	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	84870662	84870663	chr5:84870663:T:G	rs12520666	T	G	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	84886275	84886276	chr5:84886276:T:C	rs6865339	T	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	87393418	87393419	chr5:87393419:T:G	rs939775602	T	G	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	87443397	87443398	chr5:87443398:G:C	rs12514800	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	87473175	87473176	chr5:87473176:C:T	rs114303142	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	88390210	88390211	chr5:88390211:G:T	rs142098495	G	T	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr5	89256018	89256019	chr5:89256019:A:G	rs13355558	A	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	90551125	90551126	chr5:90551126:G:A	rs666659	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	90704150	90704151	chr5:90704151:A:G	rs10942606	A	G	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	90802908	90802909	chr5:90802909:C:G	rs376450621	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	91308217	91308218	chr5:91308218:G:T	rs6865066	G	T	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr5	91357294	91357295	chr5:91357295:C:G	rs10071755	C	G	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	91799472	91799473	chr5:91799473:G:A	rs2367825	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	92132475	92132476	chr5:92132476:T:C	rs1013768199	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	92311330	92311331	chr5:92311331:A:G	rs35539975	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	92422034	92422035	chr5:92422035:C:T	rs6885976	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	92552389	92552390	chr5:92552390:G:A	rs10067350	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	92552437	92552438	chr5:92552438:T:G	chr5:92552438:T:G	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	92552438	92552439	chr5:92552439:T:G	rs112230829	T	G	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	92642226	92642227	chr5:92642227:A:C	rs6867167	A	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	92963473	92963474	chr5:92963474:C:T	rs10514364	C	T	C	Hoxd3_MA0912.1	14	1	+	8.951655119810335	8.387318673678044	CTGATGTAATGACTCG
chr5	93005882	93005883	chr5:93005883:C:T	rs163946	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	94621766	94621767	chr5:94621767:C:G	rs17328331	C	G	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	94693103	94693104	chr5:94693104:T:C	rs1392233565	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	95076855	95076856	chr5:95076856:A:T	rs10061397	A	T	T	Hoxd3_MA0912.1	6	1	-	10.57473783650499	6.237046775410946	CTGGGGTAATTACACA
chr5	95719320	95719321	chr5:95719321:A:G	rs6892832	A	G	G	Hoxd3_MA0912.1	1	1	-	8.714787611761436	6.630727124225306	GTCAGTTAATTACTCT
chr5	95843604	95843605	chr5:95843605:G:A	rs7719227	G	A	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	95938927	95938928	chr5:95938928:T:C	rs12055262	T	C	C	Hoxd3_MA0912.1	10	1	+	7.124349970411849	0.3446667277814222	CTGGGGAAATTACTCC
chr5	95942071	95942072	chr5:95942072:C:T	rs57595413	C	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr5	96281449	96281450	chr5:96281450:A:T	rs6881060	A	T	A	Hoxd3_MA0912.1	14	1	-	8.438243885497034	7.882199636580744	CAGCTGTAATTAACTG
chr5	96757285	96757286	chr5:96757286:A:G	rs28081	A	G	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr5	96861309	96861310	chr5:96861310:T:G	rs17484359	T	G	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	97145099	97145100	chr5:97145100:C:T	rs13176758	C	T	C	Hoxd3_MA0912.1	13	1	+	9.3546714964372	8.750434767924826	CTGATTCAATTACCTC
chr5	97714656	97714657	chr5:97714657:T:A	rs2115767	T	A	T	Hoxd3_MA0912.1	1	1	-	8.752141817444164	9.978378031606102	CAGGATCAATTAAACT
chr5	98131770	98131771	chr5:98131771:C:T	rs149435926	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	98131780	98131781	chr5:98131781:G:T	rs78071233	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	98170726	98170727	chr5:98170727:T:A	rs35945862	T	A	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	98249363	98249364	chr5:98249364:C:T	rs28970359	C	T	c	Hoxd3_MA0912.1	21	0	-	0	0	.
chr5	98510621	98510622	chr5:98510622:G:A	rs4601066	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr5	98773217	98773218	chr5:98773218:G:A	rs116103640	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	100046353	100046354	chr5:100046354:G:A	rs183238529	G	A	-	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	100584831	100584832	chr5:100584832:C:T	rs154710	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr5	100646115	100646116	chr5:100646116:A:G	rs73155157	A	G	a	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	100796433	100796434	chr5:100796434:A:T	rs13358607	A	T	A	Hoxd3_MA0912.1	0	1	-	9.186908590976042	8.470474459037307	TTCTGTTAATTACAGG
chr5	101292375	101292376	chr5:101292376:C:T	rs79069817	C	T	C	Hoxd3_MA0912.1	0	1	+	7.548104544994464	7.600610042372395	CTGGGATAATTGCCAA
chr5	101627802	101627803	chr5:101627803:T:C	rs11960548	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	101755065	101755066	chr5:101755066:T:C	rs6596120	T	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	101762238	101762239	chr5:101762239:T:C	rs7718044	T	C	C	Hoxd3_MA0912.1	3	1	-	8.568589018500834	8.45449126746181	CTGATGTAATTATGGG
chr5	101785212	101785213	chr5:101785213:A:G	rs2123504	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	102031288	102031289	chr5:102031289:C:T	rs35922130	C	T	C	Hoxd3_MA0912.1	5	1	-	8.549104724343758	7.824541347550435	CAGATGTAATTAAGGG
chr5	102101245	102101246	chr5:102101246:C:T	rs1600020	C	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	102271987	102271988	chr5:102271988:G:A	rs17148608	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	102541246	102541247	chr5:102541247:A:G	rs1393624	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	102595012	102595013	chr5:102595013:A:G	rs116679154	A	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	103356771	103356772	chr5:103356772:A:G	rs438233	A	G	A	Hoxd3_MA0912.1	9	1	-	11.85670975954511	4.968137299979746	TTGGGTTAATTACTTT
chr5	103424432	103424433	chr5:103424433:T:C	rs2068325	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	103569836	103569837	chr5:103569837:T:A	rs294052	T	A	t	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	103801311	103801312	chr5:103801312:T:A	rs474439	T	A	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	103844286	103844287	chr5:103844287:G:A	chr5:103844287:G:A	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	104733504	104733505	chr5:104733505:C:T	rs190593360	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	105207429	105207430	chr5:105207430:A:C	rs11242546	A	C	A	Hoxd3_MA0912.1	0	1	-	7.848518554970949	5.81163662770991	TTGGGATAATGAGTCC
chr5	105617599	105617600	chr5:105617600:A:G	rs79327154	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	105687594	105687595	chr5:105687595:A:T	rs34561069	A	T	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	106681357	106681358	chr5:106681358:A:C	rs61139985	A	C	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	107149422	107149423	chr5:107149423:T:G	rs7733658	T	G	T	Hoxd3_MA0912.1	11	1	-	8.297602405416823	1.5529662360044942	TTGTACTCATTAAACC
chr5	107154143	107154144	chr5:107154144:C:T	rs1030173	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	107217293	107217294	chr5:107217294:A:G	rs35814230	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	107223131	107223132	chr5:107223132:T:G	rs75429924	T	G	T	Hoxd3_MA0912.1	1	1	+	9.944359647025683	7.8602991594895535	CTGAGTTCATTACATT
chr5	107223140	107223141	chr5:107223141:T:C	rs72782153	T	C	T	Hoxd3_MA0912.1	10	1	+	9.944359647025683	3.164676404395256	CTGAGTTCATTACATT
chr5	107502052	107502053	chr5:107502053:G:A	rs27362	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	107545631	107545632	chr5:107545632:A:G	rs662627	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	107949374	107949375	chr5:107949375:A:G	rs1433057	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr5	108436850	108436851	chr5:108436851:G:A	rs1421971	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	108436872	108436873	chr5:108436873:C:T	rs34924629	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr5	108561926	108561927	chr5:108561927:C:T	rs76248854	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr5	108672707	108672708	chr5:108672708:T:G	rs2940517	T	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	108672736	108672737	chr5:108672737:G:A	rs13153111	G	A	G	Hoxd3_MA0912.1	14	1	+	8.733725496544368	7.789760166780235	TTTGGTTAATGACCGG
chr5	108728813	108728814	chr5:108728814:C:G	rs77829394	C	G	C	Hoxd3_MA0912.1	15	1	-	9.522533917125104	9.56883848516679	CTGAATTAATTAGTTG
chr5	109275709	109275710	chr5:109275710:C:T	rs74890366	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	109585189	109585190	chr5:109585190:T:G	rs185465533	T	G	T	Hoxd3_MA0912.1	1	1	+	9.303563104427749	7.219502616891619	CTGGGGCAATTAAGGT
chr5	109656763	109656764	chr5:109656764:A:G	rs25916	A	G	A	Hoxd3_MA0912.1	9	1	-	7.186028750608172	0.2974562910428093	CTGGGGTCATTGCCAC
chr5	109694166	109694167	chr5:109694167:C:T	rs77409455	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr5	109936598	109936599	chr5:109936599:G:A	rs115911469	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	109961252	109961253	chr5:109961253:T:C	rs62377067	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	110161258	110161259	chr5:110161259:T:G	rs4460176	T	G	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	110206712	110206713	chr5:110206713:G:A	rs4530808	G	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	110342865	110342866	chr5:110342866:C:T	rs141528681	C	T	C	Hoxd3_MA0912.1	13	1	+	10.79156982140256	10.187333092890185	TTCTGTTAATTACCCT
chr5	111093045	111093046	chr5:111093046:G:A	rs7729832	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr5	111093049	111093050	chr5:111093050:G:T	chr5:111093050:G:T	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	111093082	111093083	chr5:111093083:T:C	rs7712015	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	111112153	111112154	chr5:111112154:A:G	rs12515367	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr5	111159966	111159967	chr5:111159967:A:C	rs77317936	A	C	A	Hoxd3_MA0912.1	10	1	-	7.934631512686383	5.960689146505864	GTGAGTCAATTAAACC
chr5	111727160	111727161	chr5:111727161:T:C	rs55689845	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	111735599	111735600	chr5:111735600:A:G	rs3797723	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	111953861	111953862	chr5:111953862:T:C	rs35303575	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	111974435	111974436	chr5:111974436:T:C	rs34931	T	C	T	Hoxd3_MA0912.1	9	1	+	7.883638420890156	0.9950659613247943	ATGGGACAATTGACCT
chr5	111974572	111974573	chr5:111974573:A:G	rs2279652	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr5	111995939	111995940	chr5:111995940:A:G	rs57650449	A	G	A	Hoxd3_MA0912.1	9	1	-	8.205745766254251	1.31717330668889	TAGAAGTAATGAACGG
chr5	112124629	112124630	chr5:112124630:T:C	rs30287	T	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr5	112143774	112143775	chr5:112143775:A:G	rs59486872	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	112630484	112630485	chr5:112630485:G:A	rs1009331317	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	112847459	112847460	chr5:112847460:A:G	rs2546112	A	G	a	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	113072479	113072480	chr5:113072480:C:T	rs11750093	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	113126751	113126752	chr5:113126752:C:T	rs4705783	C	T	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	113162987	113162988	chr5:113162988:G:C	rs78936021	G	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	113163002	113163003	chr5:113163003:C:T	rs75947835	C	T	T	Hoxd3_MA0912.1	15	1	-	9.268466646015431	8.427468019056215	CTGATTCAATTACACG
chr5	113163006	113163007	chr5:113163007:T:G	rs10075902	T	G	T	Hoxd3_MA0912.1	11	1	-	9.268466646015431	2.523830476603102	CTGATTCAATTACACG
chr5	113212934	113212935	chr5:113212935:T:G	rs7723474	T	G	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	113325381	113325382	chr5:113325382:G:A	rs74792922	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	113325412	113325413	chr5:113325413:G:A	rs11741176	G	A	G	Hoxd3_MA0912.1	15	1	+	8.568619279261545	7.727620652302329	TTGTTTTCATTACTCG
chr5	113531440	113531441	chr5:113531441:T:G	rs4438867	T	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	113682643	113682644	chr5:113682644:C:G	rs66518794	C	G	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	113689899	113689900	chr5:113689900:A:C	rs73246983	A	C	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	113694216	113694217	chr5:113694217:T:C	rs4329014	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr5	113874911	113874912	chr5:113874912:A:T	rs7713629	A	T	T	Hoxd3_MA0912.1	8	1	+	8.621317842707436	4.130640655940443	ATGGTGTAATTGCATT
chr5	114244771	114244772	chr5:114244772:C:T	rs6894277	C	T	C	Hoxd3_MA0912.1	13	1	+	8.338858744844332	7.734622016331959	TTATGTCAATTAACGG
chr5	114325559	114325560	chr5:114325560:G:A	rs12518600	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	114519699	114519700	chr5:114519700:A:C	rs680075	A	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	115342955	115342956	chr5:115342956:A:G	rs17137637	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	115426619	115426620	chr5:115426620:C:T	rs139371668	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	115465647	115465648	chr5:115465648:A:G	rs10037534	A	G	A	Hoxd3_MA0912.1	1	1	-	8.835007782174973	6.750947294638843	CTGTTGCAATTACTTT
chr5	115939558	115939559	chr5:115939559:C:G	rs1338473310	C	G	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	116046093	116046094	chr5:116046094:C:A	rs12187271	C	A	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	116076902	116076903	chr5:116076903:A:G	rs56953556	A	G	A	Hoxd3_MA0912.1	11	1	+	9.325917658016513	7.53999170983552	TTGAGATAATTAGATG
chr5	116097638	116097639	chr5:116097639:G:A	rs58406663	G	A	G	Hoxd3_MA0912.1	14	1	-	10.364594902166784	9.800258456034493	TTTATATAATTACCCT
chr5	116160772	116160773	chr5:116160773:A:G	rs1508875	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr5	116289562	116289563	chr5:116289563:C:A	rs76292674	C	A	C	Hoxd3_MA0912.1	14	1	-	9.47264215582047	9.084721074972627	CTGTATTAATTAAAGA
chr5	116480831	116480832	chr5:116480832:G:C	rs2278262	G	C	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	116559498	116559499	chr5:116559499:G:A	rs254206	G	A	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	116646375	116646376	chr5:116646376:A:G	rs583097	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	116849316	116849317	chr5:116849317:G:A	rs73782836	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	116887270	116887271	chr5:116887271:A:G	rs1672491	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	117083153	117083154	chr5:117083154:T:C	rs6888475	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr5	117088802	117088803	chr5:117088803:A:G	rs10478326	A	G	A	Hoxd3_MA0912.1	1	1	-	9.47089896095145	7.3868384734153185	ATCTGTTAATTACTCT
chr5	117173004	117173005	chr5:117173005:G:T	rs7718797	G	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	118544974	118544975	chr5:118544975:T:G	rs10058452	T	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	118550007	118550008	chr5:118550008:G:T	rs1864331	G	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr5	119324054	119324055	chr5:119324055:T:G	rs188713801	T	G	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	119339750	119339751	chr5:119339751:T:G	rs3813305	T	G	T	Hoxd3_MA0912.1	10	1	+	8.951326278081607	6.977383911901088	CTATGGTAATTACATG
chr5	119579072	119579073	chr5:119579073:G:C	rs138161900	G	C	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	119692555	119692556	chr5:119692556:G:C	rs10039600	G	C	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	120062537	120062538	chr5:120062538:G:T	rs58300994	G	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	120062539	120062540	chr5:120062540:G:A	rs60002072	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	120450145	120450146	chr5:120450146:T:A	rs143009163	T	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	120450152	120450153	chr5:120450153:A:T	rs147471479	A	T	T	Hoxd3_MA0912.1	4	1	+	9.1233366745943	9.1233366745943	ATGAAGCAATTAATGT
chr5	120672084	120672085	chr5:120672085:C:A	rs2011072	C	A	C	Hoxd3_MA0912.1	12	1	-	8.51339959645531	8.274169907389476	ATTGTGTAATTAGCCC
chr5	121384580	121384581	chr5:121384581:A:G	rs182538	A	G	g	Hoxd3_MA0912.1	22	0	+	0	0	.
chr5	121390210	121390211	chr5:121390211:G:A	rs2561906	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	121757824	121757825	chr5:121757825:T:A	rs17148352	T	A	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	121870461	121870462	chr5:121870462:T:C	rs4476751	T	C	T	Hoxd3_MA0912.1	8	1	-	8.76512195784411	1.8765494982787472	CTCAGTTCATTAACTT
chr5	122199394	122199395	chr5:122199395:G:A	rs35695438	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	122199443	122199444	chr5:122199444:G:A	rs1421883	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	122351995	122351996	chr5:122351996:A:C	rs191796288	A	C	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	122499792	122499793	chr5:122499793:T:C	rs59474966	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	122722579	122722580	chr5:122722580:G:C	rs7735791	G	C	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	123115128	123115129	chr5:123115129:G:A	rs335182	G	A	G	Hoxd3_MA0912.1	0	1	+	9.550698869993745	10.871146665316049	GTGGGCTAATTACCAT
chr5	123244395	123244396	chr5:123244396:G:A	rs425161	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	123807460	123807461	chr5:123807461:C:G	rs144158205	C	G	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	123844886	123844887	chr5:123844887:G:T	rs12515740	G	T	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	124127164	124127165	chr5:124127165:C:A	rs1004891	C	A	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	124181214	124181215	chr5:124181215:A:T	rs1366351	A	T	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	124193413	124193414	chr5:124193414:C:G	rs10455041	C	G	C	Hoxd3_MA0912.1	14	1	-	8.445224294434807	8.621639659719255	CTGTTGCAATTACAGC
chr5	124234891	124234892	chr5:124234892:C:A	rs184121310	C	A	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	124398747	124398748	chr5:124398748:T:C	rs895298	T	C	C	Hoxd3_MA0912.1	11	1	-	10.071095140202797	8.285169192021803	CTGACCTAATTACCAT
chr5	124408947	124408948	chr5:124408948:A:G	rs184595403	A	G	A	Hoxd3_MA0912.1	11	1	+	9.063946124947039	7.278020176766047	CTTGTTTAATTATAGT
chr5	124513123	124513124	chr5:124513124:A:G	rs10077548	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	124747742	124747743	chr5:124747743:G:A	rs76729647	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	125141025	125141026	chr5:125141026:C:T	rs142881320	C	T	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	125187092	125187093	chr5:125187093:A:G	chr5:125187093:A:G	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr5	125485444	125485445	chr5:125485445:G:A	rs116359181	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr5	125511014	125511015	chr5:125511015:C:T	rs2061328	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	125564484	125564485	chr5:125564485:C:T	rs331720	C	T	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr5	125564503	125564504	chr5:125564504:C:T	rs331721	C	T	T	Hoxd3_MA0912.1	14	1	+	8.92807567550739	8.3637392293751	CTCTGTTAATTATTCT
chr5	125835990	125835991	chr5:125835991:G:C	rs77325149	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	126044651	126044652	chr5:126044652:A:G	rs3849063	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	126044656	126044657	chr5:126044657:T:C	chr5:126044657:T:C	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr5	126055523	126055524	chr5:126055524:A:G	rs76124725	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr5	126423280	126423281	chr5:126423281:C:T	chr5:126423281:C:T	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	126516282	126516283	chr5:126516283:G:C	rs13163782	G	C	G	Hoxd3_MA0912.1	4	1	+	8.393416189735527	6.815338279022446	TTGGGATAATTGAATG
chr5	126516299	126516300	chr5:126516300:A:G	rs13167310	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	126516311	126516312	chr5:126516312:G:A	rs79328259	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	127030106	127030107	chr5:127030107:C:T	chr5:127030107:C:T	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr5	127073293	127073294	chr5:127073294:A:G	rs73783529	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	127073295	127073296	chr5:127073296:T:C	rs1038117537	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	127076799	127076800	chr5:127076800:C:T	rs74596893	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	127233467	127233468	chr5:127233468:G:A	rs2898039	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	127871653	127871654	chr5:127871654:T:A	rs146827272	T	A	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr5	128081226	128081227	chr5:128081227:A:G	rs1432614	A	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	128081279	128081280	chr5:128081280:A:C	rs148304736	A	C	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr5	128164071	128164072	chr5:128164072:A:T	rs6595806	A	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	128272439	128272440	chr5:128272440:A:G	rs75856965	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	128737829	128737830	chr5:128737830:A:G	rs247183	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	128926046	128926047	chr5:128926047:A:G	rs55729238	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	129510685	129510686	chr5:129510686:A:T	rs79859712	A	T	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	129716906	129716907	chr5:129716907:G:C	rs111421934	G	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	129718352	129718353	chr5:129718353:A:T	chr5:129718353:A:T	A	T	a	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	130021975	130021976	chr5:130021976:C:G	rs17162920	C	G	G	Hoxd3_MA0912.1	5	1	+	9.436637469489137	9.625163803169974	CAGGACTAATTAACTG
chr5	130991432	130991433	chr5:130991433:C:A	rs6595973	C	A	A	Hoxd3_MA0912.1	3	1	+	8.715168503105522	10.016186171817486	TTGCTGCAATTAAACT
chr5	131379388	131379389	chr5:131379389:T:C	rs565448492	T	C	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	131657430	131657431	chr5:131657431:A:G	rs31584	A	G	g	Hoxd3_MA0912.1	15	1	-	8.312566704189866	7.534862135601858	TAGGGGCAATTAGACT
chr5	131952774	131952775	chr5:131952775:G:A	rs676944	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	132075185	132075186	chr5:132075186:T:C	rs743564	T	C	T	Hoxd3_MA0912.1	15	1	-	7.552525705481948	8.393524332441164	CTGACCTCATTAACCA
chr5	132099376	132099377	chr5:132099377:G:C	chr5:132099377:G:C	G	C	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	132377857	132377858	chr5:132377858:C:T	rs79684562	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr5	132377862	132377863	chr5:132377863:G:T	rs34452667	G	T	G	Hoxd3_MA0912.1	12	1	-	8.117883111975916	8.117883111975916	CTGGGCCAATGACCCC
chr5	132483799	132483800	chr5:132483800:A:G	rs190321767	A	G	A	Hoxd3_MA0912.1	9	1	-	7.766923444694015	0.8783509851286533	CTTGGGTCATTGACCT
chr5	132655963	132655964	chr5:132655964:C:T	rs67006560	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	132776042	132776043	chr5:132776043:G:A	rs30520	G	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	132802831	132802832	chr5:132802832:T:C	rs809122	T	C	T	Hoxd3_MA0912.1	8	1	-	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr5	132849726	132849727	chr5:132849727:A:C	rs1032764	A	C	C	Hoxd3_MA0912.1	9	1	-	10.963450992166132	6.4727738053991395	TTGGAATAATTAATCT
chr5	132892440	132892441	chr5:132892441:A:G	rs11739417	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	133188199	133188200	chr5:133188200:G:T	rs10068084	G	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	133266350	133266351	chr5:133266351:A:G	rs17166469	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	133348965	133348966	chr5:133348966:A:T	rs17166625	A	T	A	Hoxd3_MA0912.1	3	1	-	9.164853834086179	9.72919028021847	CTGTTTTAATTGGCCT
chr5	133503883	133503884	chr5:133503884:A:C	rs1428911	A	C	A	Hoxd3_MA0912.1	5	1	-	9.255079308008686	9.126284199803115	ATGAGTCAATTAAACC
chr5	133523074	133523075	chr5:133523075:G:A	rs185590	G	A	G	Hoxd3_MA0912.1	14	1	+	10.033675592263913	9.08971026249978	AGGAGGTAATTAACGT
chr5	133523095	133523096	chr5:133523096:A:G	rs155580	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	133686012	133686013	chr5:133686013:A:G	rs6867044	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	133878390	133878391	chr5:133878391:A:G	rs2098643	A	G	G	Hoxd3_MA0912.1	6	1	-	8.779645886281486	6.993719938100494	TATGACTAATTACTGT
chr5	134054570	134054571	chr5:134054571:C:T	rs4958212	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	134490835	134490836	chr5:134490836:G:A	rs6889807	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr5	134548360	134548361	chr5:134548361:T:G	rs1036867566	T	G	T	Hoxd3_MA0912.1	10	1	+	9.720557460867376	7.746615094686856	GTGATTTAATTAACCC
chr5	134648193	134648194	chr5:134648194:A:G	rs773602099	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	134924074	134924075	chr5:134924075:T:C	rs75288982	T	C	-	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	135069791	135069792	chr5:135069792:T:C	rs6881034	T	C	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	135196514	135196515	chr5:135196515:A:G	rs1834905	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	135493729	135493730	chr5:135493730:C:T	rs17644674	C	T	C	Hoxd3_MA0912.1	13	1	+	7.231223739705108	6.626987011192734	CAGTGGCCATTAACGT
chr5	135504171	135504172	chr5:135504172:G:A	rs11749616	G	A	T	Hoxd3_MA0912.1	15	1	+	7.799337572608898	6.958338945649682	CAGGAGCAATTAAACG
chr5	135536166	135536167	chr5:135536167:C:T	rs145500479	C	T	C	Hoxd3_MA0912.1	4	1	-	6.994499510769977	6.390262782257603	CGGCGGTAATTACGGG
chr5	135570245	135570246	chr5:135570246:G:A	rs573593956	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	135570286	135570287	chr5:135570287:C:T	rs973729494	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	135837248	135837249	chr5:135837249:C:T	rs6885670	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	136401176	136401177	chr5:136401177:C:T	rs346634	C	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	136810578	136810579	chr5:136810579:C:A	rs140316623	C	A	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	136810596	136810597	chr5:136810597:C:T	rs1325677641	C	T	C	Hoxd3_MA0912.1	12	1	-	7.746861074743151	8.714383305682182	CTGAGCTAATTGGACA
chr5	136927799	136927800	chr5:136927800:G:C	rs366091	G	C	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	136927800	136927801	chr5:136927801:C:A	rs394351	C	A	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	137306391	137306392	chr5:137306392:G:A	rs2571248	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	137466857	137466858	chr5:137466858:G:A	rs6596384	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	137516471	137516472	chr5:137516472:G:A	rs4995712	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	137564178	137564179	chr5:137564179:A:C	rs13156862	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	137649707	137649708	chr5:137649708:A:G	rs4496703	A	G	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	137659319	137659320	chr5:137659320:G:A	rs3777382	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	137743276	137743277	chr5:137743277:T:C	chr5:137743277:T:C	T	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	138091078	138091079	chr5:138091079:C:T	rs12520886	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	138576117	138576118	chr5:138576118:C:T	rs41294442	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	138648505	138648506	chr5:138648506:A:G	rs17171925	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	139593758	139593759	chr5:139593759:T:C	rs355147	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	139699487	139699488	chr5:139699488:C:T	chr5:139699488:C:T	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	139711124	139711125	chr5:139711125:A:G	rs1158299502	A	G	A	Hoxd3_MA0912.1	15	1	-	9.936677400181175	9.158972831593166	CTGCGCTAATTAGCTT
chr5	139882928	139882929	chr5:139882929:G:A	rs3777099	G	A	G	Hoxd3_MA0912.1	4	1	+	9.033338122509514	8.42910139399714	CAGAGATAATGACCCT
chr5	140302311	140302312	chr5:140302312:G:A	rs13185866	G	A	G	Hoxd3_MA0912.1	15	1	+	8.350361998438137	7.509363371478921	TTGGGGTCATTAGTGG
chr5	140321022	140321023	chr5:140321023:T:A	rs11168018	T	A	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr5	141040638	141040639	chr5:141040639:C:T	rs31745	C	T	T	Hoxd3_MA0912.1	0	1	+	8.338260600781219	8.39076609815915	CTTGTCTAATTAGTCG
chr5	141077900	141077901	chr5:141077901:C:T	rs31797	C	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	141320269	141320270	chr5:141320270:G:A	rs145439224	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr5	141320272	141320273	chr5:141320273:T:G	rs11547633	T	G	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	141320313	141320314	chr5:141320314:G:C	rs143483447	G	C	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	141520441	141520442	chr5:141520442:C:T	rs12520873	C	T	C	Hoxd3_MA0912.1	14	1	-	9.351030651426312	8.407065321662179	ATGAGCTCATTACTGT
chr5	141558367	141558368	chr5:141558368:T:C	rs10044763	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	141715572	141715573	chr5:141715573:G:T	chr5:141715573:G:T	G	T	G	Hoxd3_MA0912.1	1	1	+	6.796109656772569	8.880170144308698	TGGAGCTCATTAGCGG
chr5	141715597	141715598	chr5:141715598:G:A	rs116202922	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr5	141719296	141719297	chr5:141719297:A:G	rs248628	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr5	141779670	141779671	chr5:141779671:A:T	rs248478	A	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	141826335	141826336	chr5:141826336:C:T	rs75602048	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr5	141875832	141875833	chr5:141875833:G:A	rs114965409	G	A	G	Hoxd3_MA0912.1	15	1	+	9.011114957790106	8.17011633083089	TAGTTGTAATTACAGG
chr5	141997651	141997652	chr5:141997652:T:C	rs390572	T	C	C	Hoxd3_MA0912.1	7	1	-	8.500306013335631	1.7206227707052044	TTCAGCTAATGACCTT
chr5	141997671	141997672	chr5:141997672:A:G	rs404510	A	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	142011095	142011096	chr5:142011096:G:A	rs252094	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	142054594	142054595	chr5:142054595:C:T	rs7443311	C	T	c	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	142078129	142078130	chr5:142078130:A:G	rs4912800	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	142173728	142173729	chr5:142173729:G:A	rs141181529	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	142223817	142223818	chr5:142223818:A:G	rs6875314	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	142306501	142306502	chr5:142306502:A:G	rs6872619	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	142693239	142693240	chr5:142693240:C:T	rs11949820	C	T	c	Hoxd3_MA0912.1	17	0	-	0	0	.
chr5	143213412	143213413	chr5:143213413:A:C	rs7705435	A	C	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	143220962	143220963	chr5:143220963:A:G	rs17100165	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr5	143399960	143399961	chr5:143399961:C:T	rs10482622	C	T	C	Hoxd3_MA0912.1	13	1	-	9.600896654304282	10.57473783650499	CTGGGGTAATTAAGCA
chr5	143402350	143402351	chr5:143402351:A:C	chr5:143402351:A:C	A	C	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	143516095	143516096	chr5:143516096:G:A	rs66524576	G	A	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	143558685	143558686	chr5:143558686:G:A	rs145445703	G	A	G	Hoxd3_MA0912.1	15	1	+	9.019344889528911	8.178346262569695	CTGAGACAATTACACG
chr5	143692005	143692006	chr5:143692006:A:G	rs1419570156	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	143698803	143698804	chr5:143698804:T:C	rs192541274	T	C	T	Hoxd3_MA0912.1	8	1	-	7.367738822609471	0.4791663630441086	CAGAGGCAATGACTCT
chr5	143755009	143755010	chr5:143755010:C:A	rs2546879	C	A	C	Hoxd3_MA0912.1	5	1	+	9.565445951478182	9.029408908365696	TTGGGCTCATTACTTT
chr5	143760047	143760048	chr5:143760048:G:C	rs4247522	G	C	G	Hoxd3_MA0912.1	2	1	+	8.78209607590797	6.998621658214024	TTGGGTTAATGAAACA
chr5	144208850	144208851	chr5:144208851:C:T	rs2398721	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	144321420	144321421	chr5:144321421:T:G	rs10515539	T	G	G	Hoxd3_MA0912.1	0	1	+	9.182780818107519	7.145898890846479	TTTTGGTAATTACTTC
chr5	144511286	144511287	chr5:144511287:T:C	rs17102012	T	C	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr5	144548974	144548975	chr5:144548975:G:A	rs13183057	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	144598446	144598447	chr5:144598447:T:C	rs17702948	T	C	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	144598458	144598459	chr5:144598459:A:G	rs553569709	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	145411337	145411338	chr5:145411338:A:G	rs1090885	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr5	145529084	145529085	chr5:145529085:C:T	rs530322459	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	145737853	145737854	chr5:145737854:C:T	rs1027290379	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr5	145926202	145926203	chr5:145926203:G:A	rs6873171	G	A	g	Hoxd3_MA0912.1	14	1	-	8.65705758633986	8.09272114020757	CTGCTGTAATTAGACG
chr5	145926224	145926225	chr5:145926225:G:A	rs73310116	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	146203043	146203044	chr5:146203044:A:G	rs80023178	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr5	146742759	146742760	chr5:146742760:G:A	rs4705441	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	146901961	146901962	chr5:146901962:T:C	rs567116	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	147446478	147446479	chr5:147446479:G:C	rs142388672	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	147472861	147472862	chr5:147472862:T:C	rs145679263	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr5	147522483	147522484	chr5:147522484:G:A	rs11959608	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr5	147752185	147752186	chr5:147752186:G:A	rs17498180	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr5	147783381	147783382	chr5:147783382:A:G	rs13178431	A	G	A	Hoxd3_MA0912.1	14	1	-	8.730643144256478	9.294979590388769	ATGTGTCAATTACCTC
chr5	147854933	147854934	chr5:147854934:C:T	rs1432983	C	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	148071305	148071306	chr5:148071306:G:A	rs9325069	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	148468835	148468836	chr5:148468836:C:T	rs116249060	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	148562281	148562282	chr5:148562282:G:C	rs7718022	G	C	C	Hoxd3_MA0912.1	12	1	-	7.0656246535709215	6.098102422631891	CAGGGGTCATGACACT
chr5	148732850	148732851	chr5:148732851:G:C	rs71582312	G	C	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr5	148769239	148769240	chr5:148769240:G:A	rs11168062	G	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	148792150	148792151	chr5:148792151:G:A	rs246503	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	148922845	148922846	chr5:148922846:G:A	rs7717278	G	A	G	Hoxd3_MA0912.1	5	1	-	7.4094074829217895	7.726728924808198	AAGGGCTCATTACTCC
chr5	148922861	148922862	chr5:148922862:C:T	rs17461431	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	148956126	148956127	chr5:148956127:A:C	rs59291764	A	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	149067192	149067193	chr5:149067193:A:G	rs168750	A	G	G	Hoxd3_MA0912.1	2	1	-	8.410382833555932	7.9440989854127295	ATTAGGCAATTACAGT
chr5	149243534	149243535	chr5:149243535:A:G	rs10067047	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr5	149549974	149549975	chr5:149549975:A:G	rs144905053	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	149550005	149550006	chr5:149550006:A:C	chr5:149550006:A:C	A	C	A	Hoxd3_MA0912.1	11	1	+	8.688931317470557	1.9442951480582271	CTGGTCTCATTACCTG
chr5	149821039	149821040	chr5:149821040:T:C	rs32587	T	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	149874633	149874634	chr5:149874634:C:T	rs78786472	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	150209027	150209028	chr5:150209028:G:C	rs75338036	G	C	G	Hoxd3_MA0912.1	12	1	-	7.978680755662786	7.011158524723757	TTGCTATAATTACGCG
chr5	150209031	150209032	chr5:150209032:T:A	rs113104098	T	A	T	Hoxd3_MA0912.1	8	1	-	7.978680755662786	3.4880035688957953	TTGCTATAATTACGCG
chr5	150209045	150209046	chr5:150209046:G:A	rs4705430	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr5	150314433	150314434	chr5:150314434:T:C	rs10476937	T	C	C	Hoxd3_MA0912.1	12	1	+	7.951782962819637	9.158534882824501	CTGTCTCAATTATCCT
chr5	150560001	150560002	chr5:150560002:C:T	rs3095891	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	150783618	150783619	chr5:150783619:C:G	rs59053014	C	G	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	150842534	150842535	chr5:150842535:G:A	rs148401656	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	150905373	150905374	chr5:150905374:A:G	rs58717741	A	G	a	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr5	151006400	151006401	chr5:151006401:T:C	rs1054822433	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	151093280	151093281	chr5:151093281:G:A	rs4958888	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	151201138	151201139	chr5:151201139:G:C	rs402770	G	C	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr5	151217445	151217446	chr5:151217446:C:T	rs57978529	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr5	151438163	151438164	chr5:151438164:C:T	rs6861968	C	T	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	151452427	151452428	chr5:151452428:A:G	rs918421	A	G	A	Hoxd3_MA0912.1	1	1	-	8.67478085151394	6.590720363977811	CTGAAACAATTACATT
chr5	151456583	151456584	chr5:151456584:A:G	rs11954054	A	G	A	Hoxd3_MA0912.1	9	1	-	10.453819651912905	3.565247192347543	CTGGGGCAATTAAACT
chr5	151569430	151569431	chr5:151569431:C:T	rs2163769	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	151620107	151620108	chr5:151620108:G:C	rs2347119	G	C	G	Hoxd3_MA0912.1	15	1	-	7.766045221297196	7.719740653255509	ATGCATTCATTACCCC
chr5	151620121	151620122	chr5:151620122:A:G	rs1079306	A	G	a	Hoxd3_MA0912.1	1	1	-	7.766045221297196	5.681984733761066	ATGCATTCATTACCCC
chr5	151620125	151620126	chr5:151620126:C:T	rs73797012	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	151620135	151620136	chr5:151620136:C:G	rs116755918	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	151660064	151660065	chr5:151660065:C:T	rs2033467	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	151924124	151924125	chr5:151924125:T:A	rs72802240	T	A	T	Hoxd3_MA0912.1	15	1	+	8.796666446444773	7.131658682855862	CAGTCCTAATTAAACT
chr5	152089965	152089966	chr5:152089966:G:T	rs29856	G	T	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	152277535	152277536	chr5:152277536:T:A	rs12519134	T	A	T	Hoxd3_MA0912.1	5	1	-	9.64490354445649	10.498262029455384	GTGAAATAATTACCCT
chr5	152427556	152427557	chr5:152427557:G:T	rs72791488	G	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr5	153658455	153658456	chr5:153658456:G:A	rs2963942	G	A	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr5	153711926	153711927	chr5:153711927:T:C	rs6580029	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	154162457	154162458	chr5:154162458:C:G	chr5:154162458:C:G	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	154228165	154228166	chr5:154228166:A:G	rs721868	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	154231687	154231688	chr5:154231688:A:G	rs2112687	A	G	A	Hoxd3_MA0912.1	10	1	-	7.661802514883021	0.8821192722525935	ATGGCCTCATTACCCC
chr5	154238695	154238696	chr5:154238696:G:C	rs12522623	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	154482758	154482759	chr5:154482759:A:G	rs573209358	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	154618555	154618556	chr5:154618556:C:T	rs62380476	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	154618561	154618562	chr5:154618562:G:A	rs11167691	G	A	G	Hoxd3_MA0912.1	0	1	+	8.662484207564228	9.982932002886532	GTGTTCTAATTACCGC
chr5	155004467	155004468	chr5:155004468:T:C	rs77656625	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr5	155021972	155021973	chr5:155021973:A:G	rs74854623	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	155685820	155685821	chr5:155685821:C:T	rs55964788	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr5	155948895	155948896	chr5:155948896:C:T	rs550352724	C	T	C	Hoxd3_MA0912.1	5	1	+	8.928550294411771	9.245871736298179	CTGAACTAATTAGTCA
chr5	155979015	155979016	chr5:155979016:C:T	rs73810382	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr5	156003041	156003042	chr5:156003042:G:A	rs1244603622	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	156444786	156444787	chr5:156444787:A:G	rs73815505	A	G	A	Hoxd3_MA0912.1	4	1	-	11.625696754714031	10.651855572513323	TTGATGTAATTACAGT
chr5	156474299	156474300	chr5:156474300:C:T	rs766536998	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr5	156480476	156480477	chr5:156480477:A:G	rs4704804	A	G	G	Hoxd3_MA0912.1	5	1	-	10.672871880941548	10.35555043905514	TTGGTTTAATTAGAGT
chr5	156753794	156753795	chr5:156753795:T:C	rs150003354	T	C	T	Hoxd3_MA0912.1	1	1	+	8.690742861876394	6.606682374340266	ATGATTCAATTACCTC
chr5	156929466	156929467	chr5:156929467:A:G	rs72805129	A	G	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	157050819	157050820	chr5:157050820:G:A	rs17573010	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr5	157295417	157295418	chr5:157295418:C:T	rs17054431	C	T	C	Hoxd3_MA0912.1	13	1	+	8.906015796964027	8.301779068451653	ATCATGTAATTAACGG
chr5	157516123	157516124	chr5:157516124:A:G	chr5:157516124:A:G	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	157529916	157529917	chr5:157529917:T:C	rs115271681	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	157576642	157576643	chr5:157576643:A:C	rs11465226	A	C	A	Hoxd3_MA0912.1	3	1	+	9.737202024645681	8.436184355933715	CTTATTTAATTAATCG
chr5	157913803	157913804	chr5:157913804:G:C	rs34417617	G	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	158059961	158059962	chr5:158059962:T:C	rs1957560	T	C	C	Hoxd3_MA0912.1	13	1	+	9.938656301376003	10.542893029888377	CAGAGCTAATTAATGG
chr5	158066307	158066308	chr5:158066308:C:T	rs2962381	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	158369047	158369048	chr5:158369048:G:A	rs113868083	G	A	G	Hoxd3_MA0912.1	14	1	+	9.087404568617746	8.143439238853613	CAGTATTAATTAATGG
chr5	158546101	158546102	chr5:158546102:C:T	rs75413869	C	T	C	Hoxd3_MA0912.1	7	1	+	9.001118161740568	4.1953772852906575	TTTGTGTCATTAACCT
chr5	158609741	158609742	chr5:158609742:G:A	rs73294472	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr5	158775911	158775912	chr5:158775912:A:G	rs11745795	A	G	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	158983506	158983507	chr5:158983507:C:T	rs13189454	C	T	C	Hoxd3_MA0912.1	5	1	+	8.922231343150093	9.239552785036501	CTGAACTAATTAAGCA
chr5	159255320	159255321	chr5:159255321:C:T	rs75929053	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	159391380	159391381	chr5:159391381:A:G	rs67957204	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	159787694	159787695	chr5:159787695:C:A	rs1003068	C	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	159816311	159816312	chr5:159816312:A:T	rs76137283	A	T	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	159947846	159947847	chr5:159947847:G:A	rs55835877	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr5	159947882	159947883	chr5:159947883:G:A	rs1030009576	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	160106175	160106176	chr5:160106176:G:A	rs73313104	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	160170280	160170281	chr5:160170281:A:T	rs2546363	A	T	A	Hoxd3_MA0912.1	8	1	+	10.653889719633954	6.163212532866961	TTAGTCTAATTAACCT
chr5	160420072	160420073	chr5:160420073:G:A	rs2910199	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	160773100	160773101	chr5:160773101:T:C	rs4594897	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	161234976	161234977	chr5:161234977:A:G	rs72809500	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr5	161727690	161727691	chr5:161727691:G:A	rs79324219	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	162013937	162013938	chr5:162013938:G:A	rs111424366	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr5	162568149	162568150	chr5:162568150:C:T	rs9313929	C	T	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	162568168	162568169	chr5:162568169:T:C	rs13157611	T	C	T	Hoxd3_MA0912.1	8	1	-	8.373012676993644	1.484440217428281	CAGATGTAATGACAGT
chr5	162853166	162853167	chr5:162853167:C:T	rs6875522	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	163355380	163355381	chr5:163355381:C:T	rs4869041	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr5	163397465	163397466	chr5:163397466:T:C	rs1158786	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	163531454	163531455	chr5:163531455:C:T	rs7722476	C	T	T	Hoxd3_MA0912.1	12	1	+	8.02963859063912	6.822886670634256	CTGAGGTCATTGCTTT
chr5	163564756	163564757	chr5:163564757:T:C	rs294598	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	163567964	163567965	chr5:163567965:G:A	rs4141543	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr5	164090589	164090590	chr5:164090590:A:G	rs10463141	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr5	164179347	164179348	chr5:164179348:G:A	rs72816246	G	A	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	164265819	164265820	chr5:164265820:T:G	rs4868873	T	G	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr5	165161451	165161452	chr5:165161452:T:C	rs9314057	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	165277552	165277553	chr5:165277553:T:A	rs10056972	T	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	165458149	165458150	chr5:165458150:C:G	rs72805784	C	G	C	Hoxd3_MA0912.1	14	1	+	10.099296216198185	9.922880850913737	CTGGATTAATTACTCA
chr5	166123684	166123685	chr5:166123685:A:T	rs73800685	A	T	A	Hoxd3_MA0912.1	4	1	+	10.070421879313333	10.070421879313333	CTTAACTAATTACCCC
chr5	166205891	166205892	chr5:166205892:C:A	rs73803709	C	A	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	167097158	167097159	chr5:167097159:G:A	rs2961661	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	167332724	167332725	chr5:167332725:G:A	rs141922451	G	A	G	Hoxd3_MA0912.1	5	1	-	8.411104986846022	8.72842642873243	TTGCGCTAATTAGGTT
chr5	167406181	167406182	chr5:167406182:G:T	rs55786063	G	T	T	Hoxd3_MA0912.1	14	1	+	9.446688908322209	9.058767827474366	CTTGTTTAATTAAAGG
chr5	167534708	167534709	chr5:167534709:A:G	rs79548771	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	167783620	167783621	chr5:167783621:C:G	rs12657597	C	G	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr5	167800797	167800798	chr5:167800798:A:G	rs6861976	A	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	167935410	167935411	chr5:167935411:A:T	rs32421	A	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	168039637	168039638	chr5:168039638:T:C	rs114911655	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	168110954	168110955	chr5:168110955:A:G	rs140059051	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	168210587	168210588	chr5:168210588:A:G	rs9918152	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	168383321	168383322	chr5:168383322:C:A	rs2337135	C	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	168464824	168464825	chr5:168464825:T:C	rs3203960	T	C	C	Hoxd3_MA0912.1	8	1	-	7.045057726748842	0.15648526718347922	CTGGGTCAATTGGCTG
chr5	168748865	168748866	chr5:168748866:T:C	rs78758741	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr5	168881646	168881647	chr5:168881647:T:C	rs1875975	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr5	169052254	169052255	chr5:169052255:T:C	rs111417834	T	C	T	Hoxd3_MA0912.1	1	1	+	7.768650211104525	5.684589723568395	CTGAGTCAATGAATGC
chr5	169052277	169052278	chr5:169052278:C:G	rs185919182	C	G	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	169142518	169142519	chr5:169142519:T:C	rs530807728	T	C	T	Hoxd3_MA0912.1	8	1	-	8.233535080237946	1.3449626206725835	TAGAGCTAATGAACTG
chr5	169152838	169152839	chr5:169152839:G:A	rs10475901	G	A	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr5	169283016	169283017	chr5:169283017:C:G	rs1559075	C	G	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	169303704	169303705	chr5:169303705:C:G	rs1422029	C	G	G	Hoxd3_MA0912.1	6	1	+	9.789891017352101	4.831180796120764	ATGGAGCAATTACCCT
chr5	169335618	169335619	chr5:169335619:A:T	rs570953078	A	T	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr5	169543500	169543501	chr5:169543501:A:C	rs255827	A	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	169548187	169548188	chr5:169548188:A:G	rs3893837	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr5	169853060	169853061	chr5:169853061:A:G	rs1366225	A	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr5	170114783	170114784	chr5:170114784:A:G	rs4242149	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	170122090	170122091	chr5:170122091:A:G	rs11134610	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr5	170136578	170136579	chr5:170136579:G:A	rs6861611	G	A	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr5	170342864	170342865	chr5:170342865:T:C	rs7713802	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr5	170342866	170342867	chr5:170342867:T:A	rs7713803	T	A	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr5	170523389	170523390	chr5:170523390:G:A	rs11957313	G	A	G	Hoxd3_MA0912.1	15	1	+	8.147746302958197	7.306747675998981	CATGGATAATTACACG
chr5	170535308	170535309	chr5:170535309:C:T	rs12716257	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr5	170554972	170554973	chr5:170554973:G:A	rs146468327	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	170555031	170555032	chr5:170555032:A:G	rs9313511	A	G	G	Hoxd3_MA0912.1	15	1	-	8.12815421397108	7.350449645383071	GAGGGATAATTACAGT
chr5	170760170	170760171	chr5:170760171:C:A	rs9313523	C	A	C	Hoxd3_MA0912.1	1	1	+	7.9886236714406476	8.846447944814837	ACGAGTTAATTGCCTT
chr5	170760170	170760171	chr5:170760171:C:T	chr5:170760171:C:T	C	T	C	Hoxd3_MA0912.1	1	1	+	7.9886236714406476	10.072684158976777	ACGAGTTAATTGCCTT
chr5	171355009	171355010	chr5:171355010:C:T	rs7720855	C	T	C	Hoxd3_MA0912.1	15	1	+	8.800182595108247	9.577887163696255	TGGCGTTAATTAACGC
chr5	171389237	171389238	chr5:171389238:T:G	rs12659849	T	G	.	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	171394894	171394895	chr5:171394895:T:C	rs58262255	T	C	T	Hoxd3_MA0912.1	10	1	+	8.358480761477407	1.5787975188469805	TTGATATAATTAGGCC
chr5	171678881	171678882	chr5:171678882:C:T	rs151029624	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr5	171740149	171740150	chr5:171740150:G:T	rs10061738	G	T	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr5	172047169	172047170	chr5:172047170:G:A	rs11959830	G	A	G	Hoxd3_MA0912.1	14	1	-	6.931304772309368	6.366968326177078	CTGGAACAATGACCCG
chr5	172173336	172173337	chr5:172173337:C:G	rs28406981	C	G	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr5	172173366	172173367	chr5:172173367:G:A	rs1209258360	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr5	172177799	172177800	chr5:172177800:G:C	rs34046889	G	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr5	172402845	172402846	chr5:172402846:T:C	rs7725967	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr5	172729003	172729004	chr5:172729004:G:A	rs322387	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr5	172821796	172821797	chr5:172821797:G:A	rs1473399	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr5	172821844	172821845	chr5:172821845:T:C	rs80168978	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr5	172830576	172830577	chr5:172830577:G:A	rs149005755	G	A	G	Hoxd3_MA0912.1	6	1	-	8.116014369728015	9.901940317909007	TTGTCCCAATTAACCC
chr5	172853756	172853757	chr5:172853757:T:G	chr5:172853757:T:G	T	G	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	172901304	172901305	chr5:172901305:G:A	rs74942093	G	A	G	Hoxd3_MA0912.1	13	1	-	8.442923191579828	7.838686463067454	CAAGGATAATTAACGG
chr5	172926868	172926869	chr5:172926869:T:G	rs11748190	T	G	T	Hoxd3_MA0912.1	1	1	+	9.988478305108814	7.904417817572684	TTGAACTAATTACCTA
chr5	172985549	172985550	chr5:172985550:C:A	rs6866221	C	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr5	173196171	173196172	chr5:173196172:C:T	rs113291232	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	173282267	173282268	chr5:173282268:G:A	rs13162731	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr5	173553254	173553255	chr5:173553255:T:G	rs7718816	T	G	G	Hoxd3_MA0912.1	4	1	-	8.502726443876869	7.528885261676163	ATGAATTCATTACCTC
chr5	173764556	173764557	chr5:173764557:A:G	rs111492773	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr5	173791969	173791970	chr5:173791970:C:A	rs61303486	C	A	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr5	173822925	173822926	chr5:173822926:C:T	rs3112487	C	T	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr5	173822956	173822957	chr5:173822957:G:C	rs3099643	G	C	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr5	173886449	173886450	chr5:173886450:C:G	rs359461	C	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr5	174093262	174093263	chr5:174093263:T:C	chr5:174093263:T:C	T	C	T	Hoxd3_MA0912.1	7	1	-	9.734287189690441	2.9546039470600145	TTTAGTTAATTAGCAT
chr5	174235445	174235446	chr5:174235446:G:A	rs59912066	G	A	G	Hoxd3_MA0912.1	12	1	-	7.522671896281653	6.315919976276789	CTGGCTTCATTACCAC
chr5	174411063	174411064	chr5:174411064:G:T	rs7721965	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr5	174695520	174695521	chr5:174695521:G:T	rs2089499	G	T	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr5	174725749	174725750	chr5:174725750:A:C	rs73340422	A	C	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr5	174986858	174986859	chr5:174986859:T:G	rs10045547	T	G	t	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr5	175341727	175341728	chr5:175341728:T:C	rs4242185	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr5	175341842	175341843	chr5:175341843:G:A	rs10069450	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	176817903	176817904	chr5:176817904:G:T	rs1396448	G	T	g	Hoxd3_MA0912.1	31	0	+	0	0	.
chr5	176899229	176899230	chr5:176899230:T:C	rs11135005	T	C	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr5	177072007	177072008	chr5:177072008:A:G	rs1481964977	A	G	A	Hoxd3_MA0912.1	1	1	-	7.815948651171581	5.7318881636354515	ATGGGGTCATTGCACT
chr5	177154364	177154365	chr5:177154365:C:T	rs116610617	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr5	177298798	177298799	chr5:177298799:T:C	rs770565468	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr5	177930944	177930945	chr5:177930945:C:T	rs113821938	C	T	.	Hoxd3_MA0912.1	32	0	-	0	0	.
chr5	177930962	177930963	chr5:177930963:A:G	rs4958980	A	G	.	Hoxd3_MA0912.1	14	1	-	8.489705946796203	9.054042392928494	AGGAGCTAATTAGCTT
chr5	178275830	178275831	chr5:178275831:T:C	rs11249798	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr5	178276385	178276386	chr5:178276386:C:A	rs2973760	C	A	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr5	178278861	178278862	chr5:178278862:G:A	rs6895011	G	A	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	178278894	178278895	chr5:178278895:C:T	rs72819058	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr5	178387698	178387699	chr5:178387699:C:T	rs57231103	C	T	c	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr5	178499927	178499928	chr5:178499928:C:T	rs35218983	C	T	C	Hoxd3_MA0912.1	12	1	+	10.103707561004446	8.89695564099958	TTGATATAATTACGCT
chr5	179060946	179060947	chr5:179060947:G:T	rs79466903	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr5	179110812	179110813	chr5:179110813:A:C	rs4701047	A	C	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr5	179342525	179342526	chr5:179342526:A:G	rs75213418	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr5	180027507	180027508	chr5:180027508:T:C	rs10045947	T	C	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr5	180243515	180243516	chr5:180243516:A:G	rs4601008	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr5	180606632	180606633	chr5:180606633:T:C	rs11955716	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr5	180606638	180606639	chr5:180606639:T:C	rs11955717	T	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr5	181167052	181167053	chr5:181167053:G:A	rs75943044	G	A	-	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr5	181182130	181182131	chr5:181182131:G:A	rs60836947	G	A	g	Hoxd3_MA0912.1	35	0	-	0	0	.
chr5	181182136	181182137	chr5:181182137:C:T	rs752373480	C	T	c	Hoxd3_MA0912.1	29	0	-	0	0	.
chr5	181182147	181182148	chr5:181182148:T:C	rs906226388	T	C	t	Hoxd3_MA0912.1	18	0	-	0	0	.
chr5	181217060	181217061	chr5:181217061:A:T	rs535859368	A	T	A	Hoxd3_MA0912.1	1	1	-	8.862085573464665	7.635849359302724	TTTTTTTAATTAGCCG
chr6	247603	247604	chr6:247604:G:A	rs139449352	G	A	G	Hoxd3_MA0912.1	0	1	-	6.632828654947836	6.685334152325767	CGGCGCTAATGACCCC
chr6	247612	247613	chr6:247613:A:G	rs368977088	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	285694	285695	chr6:285695:G:A	rs815583	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	389629	389630	chr6:389630:G:A	rs1514346	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	449482	449483	chr6:449483:C:G	rs13214605	C	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr6	685619	685620	chr6:685620:T:C	rs7773733	T	C	T	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	715473	715474	chr6:715474:T:C	rs140457894	T	C	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr6	722310	722311	chr6:722311:G:A	rs140358010	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	834043	834044	chr6:834044:T:G	rs9392177	T	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	889486	889487	chr6:889487:G:A	rs7764033	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	1078328	1078329	chr6:1078329:T:G	rs2073019	T	G	T	Hoxd3_MA0912.1	1	1	+	9.270918176502477	7.186857688966346	CTCATTTAATTAATCG
chr6	1081198	1081199	chr6:1081199:G:A	rs76364787	G	A	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr6	1145866	1145867	chr6:1145867:A:G	rs114931615	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	1254273	1254274	chr6:1254274:A:C	rs12176547	A	C	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	1408031	1408032	chr6:1408032:G:A	rs9328051	G	A	G	Hoxd3_MA0912.1	14	1	-	8.85228633130262	8.28794988517033	ATGTCTTAATTACACG
chr6	1442772	1442773	chr6:1442773:A:C	rs10458123	A	C	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	1538155	1538156	chr6:1538156:C:T	rs939791648	C	T	C	Hoxd3_MA0912.1	12	1	+	6.861750989769766	5.654999069764902	CTGACCTCATTACGCC
chr6	1614551	1614552	chr6:1614552:G:A	rs62390614	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	1873986	1873987	chr6:1873987:C:T	rs3800110	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	2194843	2194844	chr6:2194844:G:A	rs116720568	G	A	G	Hoxd3_MA0912.1	13	1	-	8.608302703133937	8.004065974621563	CTGTACTAATTGTCCT
chr6	2600012	2600013	chr6:2600013:T:C	rs2054638	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	2854132	2854133	chr6:2854133:G:A	rs412303	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	3033292	3033293	chr6:3033293:T:G	rs7745804	T	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	3305173	3305174	chr6:3305174:A:C	rs4413659	A	C	C	Hoxd3_MA0912.1	5	1	-	8.176113864263948	8.047318756058377	TGGGGTTAATTATAGC
chr6	3406740	3406741	chr6:3406741:A:G	rs114622065	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	3438670	3438671	chr6:3438671:C:T	rs146543161	C	T	C	Hoxd3_MA0912.1	14	1	+	9.23452884805492	8.670192401922629	TTCTAGTAATTAACCG
chr6	3607719	3607720	chr6:3607720:T:G	rs6919874	T	G	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	3644639	3644640	chr6:3644640:T:C	rs62392892	T	C	T	Hoxd3_MA0912.1	4	1	-	8.2561218374778	8.860358565990174	CAGCACTAATTAAACC
chr6	3714698	3714699	chr6:3714699:A:G	rs226952	A	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	3750137	3750138	chr6:3750138:C:G	rs898734026	C	G	C	Hoxd3_MA0912.1	5	1	+	8.447959018213647	8.636485351894484	CTAAGCTAATTATCCA
chr6	3823261	3823262	chr6:3823262:T:C	rs58472694	T	C	T	Hoxd3_MA0912.1	3	1	+	10.66912620995205	9.932444987372378	CTGTGGTAATTAATAT
chr6	3823288	3823289	chr6:3823289:G:A	rs59442598	G	A	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	3928820	3928821	chr6:3928821:G:A	rs9405208	G	A	G	Hoxd3_MA0912.1	5	1	-	7.56320435563266	7.880525797519068	TTGGTCCCATTACTGT
chr6	3963986	3963987	chr6:3963987:T:C	rs73721484	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	4156132	4156133	chr6:4156133:G:T	rs1399210822	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	4156136	4156137	chr6:4156137:G:C	rs549767439	G	C	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	4427188	4427189	chr6:4427189:C:T	rs116662585	C	T	C	Hoxd3_MA0912.1	1	1	-	8.582492442143739	9.44031671551793	TGGGTTTAATTAAGGT
chr6	4461034	4461035	chr6:4461035:G:A	rs182071703	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	4611962	4611963	chr6:4611963:G:A	rs3748077	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	4638964	4638965	chr6:4638965:T:C	rs234407	T	C	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	4662068	4662069	chr6:4662069:T:C	rs6923076	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr6	4756579	4756580	chr6:4756580:A:C	rs4053259	A	C	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	4864578	4864579	chr6:4864579:A:G	rs808600	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	4940569	4940570	chr6:4940570:C:A	rs114032219	C	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	4992060	4992061	chr6:4992061:G:A	rs1246982	G	A	G	Hoxd3_MA0912.1	0	1	-	6.981888890372033	7.0343943877499635	CTGGCCTAATTGGCTC
chr6	5149391	5149392	chr6:5149392:A:G	rs763883	A	G	G	Hoxd3_MA0912.1	15	1	-	9.292052105732424	8.514347537144415	CTGAGATAATGAGCCT
chr6	5647853	5647854	chr6:5647854:A:G	rs10484314	A	G	A	Hoxd3_MA0912.1	6	1	-	7.852566947308716	6.066640999127723	ACGTGCTAATTACAGG
chr6	5907981	5907982	chr6:5907982:G:A	rs9502375	G	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	5946905	5946906	chr6:5946906:A:G	rs4959364	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	6226150	6226151	chr6:6226151:C:T	rs1742926	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	6415266	6415267	chr6:6415267:G:A	rs4321868	G	A	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	6580518	6580519	chr6:6580519:A:G	rs9405943	A	G	a	Hoxd3_MA0912.1	8	1	+	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr6	6673285	6673286	chr6:6673286:G:A	rs9328381	G	A	G	Hoxd3_MA0912.1	14	1	-	9.239117297646233	8.674780851513942	CTGATATAATTGAACT
chr6	6837487	6837488	chr6:6837488:G:C	rs17142614	G	C	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	6908841	6908842	chr6:6908842:C:T	rs2326840	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr6	7167167	7167168	chr6:7167168:C:T	rs73374633	C	T	C	Hoxd3_MA0912.1	3	1	-	8.28859132505259	8.402689076091612	TTTGGTTAATTACGGA
chr6	7447004	7447005	chr6:7447005:C:T	rs534485177	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr6	7545527	7545528	chr6:7545528:A:G	rs116729519	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	7548822	7548823	chr6:7548823:C:A	rs2299034	C	A	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr6	7667219	7667220	chr6:7667220:C:T	rs9378503	C	T	T	Hoxd3_MA0912.1	3	1	+	8.687973904702819	9.424655127282493	TTACGGTAATTAGTCT
chr6	7772968	7772969	chr6:7772969:C:T	rs142293755	C	T	G	Hoxd3_MA0912.1	14	1	+	7.7958290407664705	7.23149259463418	TTGAGTTCATTAGGCG
chr6	7891541	7891542	chr6:7891542:G:A	rs3734589	G	A	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr6	7894461	7894462	chr6:7894462:T:C	rs7749719	T	C	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	7920693	7920694	chr6:7920694:G:C	chr6:7920694:G:C	G	C	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr6	7973683	7973684	chr6:7973684:A:G	rs6928832	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	8064893	8064894	chr6:8064894:G:A	rs9328453	G	A	A	Hoxd3_MA0912.1	14	1	-	7.586212775606147	7.021876329473857	GTGGTTTCATTACCCG
chr6	8223904	8223905	chr6:8223905:C:T	chr6:8223905:C:T	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	8321314	8321315	chr6:8321315:T:A	rs2652853	T	A	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	9147479	9147480	chr6:9147480:A:G	rs433114	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	10018520	10018521	chr6:10018521:A:G	rs9383331	A	G	A	Hoxd3_MA0912.1	3	1	+	9.155606385596197	9.041508634557175	CACAGCTAATTAATCT
chr6	10184456	10184457	chr6:10184457:T:G	rs6926746	T	G	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr6	10184490	10184491	chr6:10184491:T:C	rs6926769	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	10205577	10205578	chr6:10205578:A:G	rs9368121	A	G	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	10316369	10316370	chr6:10316370:C:T	rs188075256	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr6	10335436	10335437	chr6:10335437:C:A	rs3925274	C	A	a	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	10464725	10464726	chr6:10464726:A:G	rs60303957	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	10887677	10887678	chr6:10887678:C:T	chr6:10887678:C:T	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	10887698	10887699	chr6:10887699:G:T	rs2153159	G	T	T	Hoxd3_MA0912.1	5	1	+	8.996158443500525	9.124953551706096	CTGATGTAATTGGTCT
chr6	10968348	10968349	chr6:10968349:C:T	rs9348766	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	11025927	11025928	chr6:11025928:T:C	rs958712	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	11398542	11398543	chr6:11398543:G:A	rs73366900	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	11410655	11410656	chr6:11410656:A:G	rs12524463	A	G	A	Hoxd3_MA0912.1	4	1	-	9.789991922802557	8.816150740601849	CTGATCTAATTATTTT
chr6	11414607	11414608	chr6:11414608:A:C	rs7740314	A	C	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	11585566	11585567	chr6:11585567:G:T	rs295054	G	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	11693360	11693361	chr6:11693361:C:T	rs9368833	C	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	11754510	11754511	chr6:11754511:G:T	rs2235405	G	T	g	Hoxd3_MA0912.1	35	0	-	0	0	.
chr6	11770917	11770918	chr6:11770918:T:C	rs149009350	T	C	t	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	11770952	11770953	chr6:11770953:C:T	chr6:11770953:C:T	C	T	c	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	11811355	11811356	chr6:11811356:T:C	rs10947579	T	C	T	Hoxd3_MA0912.1	14	1	+	8.445895942908086	9.010232389040377	CGGTGTTAATTACATG
chr6	11941205	11941206	chr6:11941206:G:C	rs62395428	G	C	G	Hoxd3_MA0912.1	14	1	-	8.566762980502594	8.390347615218145	TTGGGGTAATGACGCC
chr6	12007844	12007845	chr6:12007845:T:A	rs72826011	T	A	T	Hoxd3_MA0912.1	12	1	-	8.976739489824704	7.7699875698198415	CAGAGCCAATTAAAGT
chr6	12007851	12007852	chr6:12007852:G:A	rs56115353	G	A	G	Hoxd3_MA0912.1	5	1	-	8.976739489824704	9.294060931711112	CAGAGCCAATTAAAGT
chr6	12234965	12234966	chr6:12234966:T:C	rs4490660	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	12508841	12508842	chr6:12508842:C:A	rs12215499	C	A	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr6	12763606	12763607	chr6:12763607:A:G	rs12526812	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	12928145	12928146	chr6:12928146:A:G	rs9357521	A	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	13250355	13250356	chr6:13250356:A:G	rs430216	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	13272792	13272793	chr6:13272793:C:A	rs114154087	C	A	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	13375678	13375679	chr6:13375679:C:G	rs564174	C	G	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	13480162	13480163	chr6:13480163:C:T	rs9474308	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	13516863	13516864	chr6:13516864:C:G	rs6458898	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	13854161	13854162	chr6:13854162:T:C	rs12662534	T	C	C	Hoxd3_MA0912.1	11	1	-	9.227430605454638	7.4415046572736445	TAGTGGTAATTACTTG
chr6	13860590	13860591	chr6:13860591:T:G	rs12214124	T	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr6	14138276	14138277	chr6:14138277:A:C	rs9396473	A	C	C	Hoxd3_MA0912.1	10	1	-	7.186772412436299	5.212830046255781	CTGACCTCATTATCCG
chr6	14167339	14167340	chr6:14167340:C:T	rs853347	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	14231792	14231793	chr6:14231793:T:C	rs79488661	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	14521720	14521721	chr6:14521721:T:G	rs7772992	T	G	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	14522595	14522596	chr6:14522596:C:T	rs9370746	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	14594567	14594568	chr6:14594568:T:C	rs9370767	T	C	c	Hoxd3_MA0912.1	9	1	+	7.532133496261054	0.6435610366956908	TTGAGCTCATGAACTC
chr6	14638979	14638980	chr6:14638980:C:T	rs771201214	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	14653070	14653071	chr6:14653071:T:C	rs2027490	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	14777925	14777926	chr6:14777926:A:C	rs1002614387	A	C	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	15065649	15065650	chr6:15065650:A:G	chr6:15065650:A:G	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	15108677	15108678	chr6:15108678:C:G	rs6928159	C	G	c	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr6	15170570	15170571	chr6:15170571:T:C	rs6935115	T	C	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	15211820	15211821	chr6:15211821:G:A	rs141425545	G	A	g	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	15457006	15457007	chr6:15457007:C:T	rs80219334	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	15462639	15462640	chr6:15462640:C:T	rs11759978	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr6	15504357	15504358	chr6:15504358:T:C	rs760659	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr6	15504388	15504389	chr6:15504389:C:T	rs531310957	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	15588889	15588890	chr6:15588890:A:G	rs760666	A	G	G	Hoxd3_MA0912.1	10	1	-	8.54318284634679	1.7634996037163613	TGGGAGTAATTAACCA
chr6	15745162	15745163	chr6:15745163:C:T	rs7768219	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	15903738	15903739	chr6:15903739:C:T	rs146110161	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr6	15903739	15903740	chr6:15903740:A:G	rs66519836	A	G	a	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	15991084	15991085	chr6:15991085:G:A	rs9296998	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr6	15991099	15991100	chr6:15991100:G:A	rs9370853	G	A	G	Hoxd3_MA0912.1	3	1	+	8.267496860313134	8.381594611352158	CTAGGATAATTACGCG
chr6	16181687	16181688	chr6:16181688:T:G	rs72833442	T	G	T	Hoxd3_MA0912.1	10	1	+	9.3910481303323	7.4171057641517795	CAGCTTTAATTACCTT
chr6	16576570	16576571	chr6:16576571:T:C	rs9477175	T	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr6	16633736	16633737	chr6:16633737:A:C	rs2299068	A	C	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	16713076	16713077	chr6:16713077:G:A	rs1150625	G	A	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	16763202	16763203	chr6:16763203:T:C	rs76154441	T	C	T	Hoxd3_MA0912.1	9	1	+	8.571425735225642	1.6828532756602812	TTGGTCTCATTACAGC
chr6	16910058	16910059	chr6:16910059:G:C	rs6938993	G	C	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr6	17030129	17030130	chr6:17030130:G:A	rs2328030	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	17035476	17035477	chr6:17035477:C:T	rs1265560631	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	17107915	17107916	chr6:17107916:G:A	rs7758868	G	A	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	17278864	17278865	chr6:17278865:C:T	rs115502986	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	17354802	17354803	chr6:17354803:A:T	rs184908985	A	T	A	Hoxd3_MA0912.1	10	1	-	10.681650819976849	3.9019675773464204	CTGAGCTAATTAGCAT
chr6	17442094	17442095	chr6:17442095:A:G	rs3777686	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr6	17860175	17860176	chr6:17860176:T:C	rs594115	T	C	C	Hoxd3_MA0912.1	10	1	+	8.360901708597254	1.5812184659668256	CAGAACTCATTACACT
chr6	17872097	17872098	chr6:17872098:G:T	rs114157579	G	T	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	18276768	18276769	chr6:18276769:G:A	rs113103838	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr6	18522636	18522637	chr6:18522637:G:C	rs9396876	G	C	g	Hoxd3_MA0912.1	15	1	-	8.591884568602794	8.545580000561108	GTGTTTTAATTACCTC
chr6	18522652	18522653	chr6:18522653:G:T	rs12661356	G	T	g	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	18753150	18753151	chr6:18753151:G:A	rs17646843	G	A	G	Hoxd3_MA0912.1	2	1	+	9.79642415106947	8.34658910691243	TTGCGCTAATTAAAAT
chr6	18861226	18861227	chr6:18861227:G:A	rs1360771	G	A	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	19025646	19025647	chr6:19025647:T:C	rs7749839	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	19289556	19289557	chr6:19289557:C:T	rs12202040	C	T	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	19309990	19309991	chr6:19309991:G:A	rs1858515	G	A	G	Hoxd3_MA0912.1	2	1	+	7.934631512686383	6.484796468529343	GTGAGTCAATTAAACC
chr6	19614589	19614590	chr6:19614590:C:G	rs551629131	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	19853088	19853089	chr6:19853089:A:G	rs9356714	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	20350350	20350351	chr6:20350351:C:G	rs115802897	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	20725008	20725009	chr6:20725009:T:C	rs7767391	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	20979349	20979350	chr6:20979350:C:G	rs201357	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	21521602	21521603	chr6:21521603:G:A	rs150764524	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	21740233	21740234	chr6:21740234:A:T	rs12191413	A	T	A	Hoxd3_MA0912.1	0	1	-	10.049380212521015	9.332946080582278	TTTTTTTAATTACACT
chr6	21887727	21887728	chr6:21887728:C:T	chr6:21887728:C:T	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr6	21922327	21922328	chr6:21922328:G:A	rs12206540	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr6	21929616	21929617	chr6:21929617:T:C	rs12201386	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	22072195	22072196	chr6:22072196:A:G	rs196025	A	G	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	22083248	22083249	chr6:22083249:A:C	chr6:22083249:A:C	A	C	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	22360511	22360512	chr6:22360512:A:G	rs1008200	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	22520900	22520901	chr6:22520901:A:G	rs9393306	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	22546925	22546926	chr6:22546926:G:A	rs77099749	G	A	G	Hoxd3_MA0912.1	14	1	-	8.213119092014939	7.648782645882648	TTGATCTCATTATCCG
chr6	22598288	22598289	chr6:22598289:G:A	rs16901664	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr6	22624392	22624393	chr6:22624393:A:G	rs12205475	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr6	22896815	22896816	chr6:22896816:C:A	rs7755443	C	A	A	Hoxd3_MA0912.1	13	1	+	9.42707611117992	8.822839382667546	CTGGATTAATGAGCCT
chr6	22996499	22996500	chr6:22996500:A:C	rs7749361	A	C	C	Hoxd3_MA0912.1	11	1	+	8.453307488355266	1.7086713189429368	TAGAGCTAATGACTTT
chr6	23277864	23277865	chr6:23277865:A:G	rs9348557	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	23441755	23441756	chr6:23441756:T:C	rs60405386	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	23592119	23592120	chr6:23592120:T:C	rs197979	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	23656325	23656326	chr6:23656326:A:C	rs9466886	A	C	A	Hoxd3_MA0912.1	9	1	-	8.756967081707385	4.266289894940392	CAGAGCTAATTGCCGG
chr6	23748750	23748751	chr6:23748751:T:G	rs1925199	T	G	G	Hoxd3_MA0912.1	10	1	+	7.953718036212262	5.979775670031743	TTCAGTTCATTACTCG
chr6	23748772	23748773	chr6:23748773:G:A	rs1925200	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	23851676	23851677	chr6:23851677:G:A	rs17298641	G	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	24232468	24232469	chr6:24232469:G:A	rs793836	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr6	24321886	24321887	chr6:24321887:G:T	rs79900548	G	T	G	Hoxd3_MA0912.1	13	1	+	8.85228633130262	9.826127513503328	ATGAATTAATTACGTG
chr6	24443141	24443142	chr6:24443142:C:T	rs1483481921	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	24454167	24454168	chr6:24454168:C:A	rs61748830	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	24462443	24462444	chr6:24462444:C:T	rs10946702	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	24932027	24932028	chr6:24932028:T:G	rs1410684	T	G	t	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	25138479	25138480	chr6:25138480:T:C	rs572255189	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	25138494	25138495	chr6:25138495:C:T	rs303019	C	T	T	Hoxd3_MA0912.1	14	1	-	7.654262827971245	6.71029749820711	GTGTGCCAATTACAGT
chr6	25319005	25319006	chr6:25319006:G:A	rs2744300	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	25414617	25414618	chr6:25414618:G:A	rs1927693	G	A	A	Hoxd3_MA0912.1	1	1	-	7.29490607982082	9.37896656735695	CCGAGCCAATTAATGG
chr6	25628216	25628217	chr6:25628217:G:A	rs9295667	G	A	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr6	26275756	26275757	chr6:26275757:A:G	rs73395313	A	G	.	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	26277039	26277040	chr6:26277040:G:A	rs9358915	G	A	.	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	26374429	26374430	chr6:26374430:G:A	rs2073526	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	26575468	26575469	chr6:26575469:G:A	rs9467798	G	A	A	Hoxd3_MA0912.1	12	1	-	9.523492624399598	8.316740704394734	CAGTTTTAATTACATT
chr6	26575594	26575595	chr6:26575595:G:A	rs72844477	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	26594856	26594857	chr6:26594857:A:G	rs376181245	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	26594858	26594859	chr6:26594859:C:T	rs181271284	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr6	26594863	26594864	chr6:26594864:G:A	rs112590438	G	A	g	Hoxd3_MA0912.1	12	1	-	7.631911862855468	6.425159942850604	AGGATGTCATTACCCT
chr6	26594868	26594869	chr6:26594869:G:C	rs12194610	G	C	g	Hoxd3_MA0912.1	7	1	-	7.631911862855468	2.826170986405559	AGGATGTCATTACCCT
chr6	27145694	27145695	chr6:27145695:T:C	rs16894323	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	27147233	27147234	chr6:27147234:C:T	rs370014824	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	27147244	27147245	chr6:27147245:T:C	rs954026769	T	C	T	Hoxd3_MA0912.1	8	1	-	8.509786050941667	1.6212135913763037	TCGGCATAATTACCCT
chr6	27168440	27168441	chr6:27168441:C:T	rs188700137	C	T	c	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	27168445	27168446	chr6:27168446:A:G	rs13219181	A	G	a	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	27274135	27274136	chr6:27274136:A:G	rs34843552	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	27336759	27336760	chr6:27336760:G:A	rs72839469	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	27505675	27505676	chr6:27505676:A:C	rs77052921	A	C	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	27525178	27525179	chr6:27525179:G:A	rs72845006	G	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	27525181	27525182	chr6:27525182:C:G	rs72845008	C	G	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	27547996	27547997	chr6:27547997:G:A	rs6915987	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	28354215	28354216	chr6:28354216:T:C	rs213238	T	C	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	28356374	28356375	chr6:28356375:A:T	rs1179402904	A	T	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	28838187	28838188	chr6:28838188:A:G	chr6:28838188:A:G	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	28886159	28886160	chr6:28886160:C:G	rs7755410	C	G	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	28886160	28886161	chr6:28886161:A:G	rs190712459	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	29005934	29005935	chr6:29005935:T:C	rs7744086	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr6	29210360	29210361	chr6:29210361:C:G	rs3116831	C	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	29663966	29663967	chr6:29663967:C:T	rs3130252	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	29724655	29724656	chr6:29724656:T:C	rs1632952	T	C	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	29757943	29757944	chr6:29757944:C:T	rs1633065	C	T	c	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	29757946	29757947	chr6:29757947:T:A	rs1625695	T	A	t	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	29828990	29828991	chr6:29828991:T:C	rs1632940	T	C	-	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	29938994	29938995	chr6:29938995:G:A	rs414215	G	A	-	Hoxd3_MA0912.1	3	1	+	7.82053376164736	7.934631512686383	GTGGGTCAATTAAACC
chr6	29953808	29953809	chr6:29953809:T:C	rs9260552	T	C	-	Hoxd3_MA0912.1	15	1	+	7.204011988512882	6.426307419924873	CTGGGATCATGAGCCT
chr6	29953820	29953821	chr6:29953821:A:G	rs9260554	A	G	-	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	29958194	29958195	chr6:29958195:A:T	rs2517701	A	T	-	Hoxd3_MA0912.1	12	1	-	9.058541398227204	10.265293318232068	CTGGACTAATTGTCCT
chr6	29964552	29964553	chr6:29964553:T:C	rs2517681	T	C	-	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	29968113	29968114	chr6:29968114:C:T	rs4248143	C	T	-	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	30007809	30007810	chr6:30007810:G:A	rs9261108	G	A	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr6	30047620	30047621	chr6:30047621:A:G	rs375426655	A	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	30074279	30074280	chr6:30074280:G:A	rs11965540	G	A	G	Hoxd3_MA0912.1	4	1	-	8.445986159015964	9.419827341216672	TAGACCTAATTAGTCT
chr6	30170231	30170232	chr6:30170232:C:T	rs544603803	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	30318302	30318303	chr6:30318303:T:C	rs6904208	T	C	T	Hoxd3_MA0912.1	8	1	-	7.617310070799974	0.7287376112346118	GTGAGCCAATTAAACC
chr6	30822141	30822142	chr6:30822142:G:A	rs9262217	G	A	G	Hoxd3_MA0912.1	3	1	+	7.983055022983253	8.097152774022277	CTGGGCTCATTAAGAT
chr6	30875779	30875780	chr6:30875780:G:C	rs7751952	G	C	G	Hoxd3_MA0912.1	12	1	-	7.529296005209585	6.561773774270557	CTGGGGTAAATACCCG
chr6	30914728	30914729	chr6:30914729:T:C	rs193150789	T	C	T	Hoxd3_MA0912.1	10	1	+	8.792035211507406	2.0123519688769784	CTGTGCTAATTAGAGA
chr6	30914735	30914736	chr6:30914736:A:G	rs1264303	A	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	31012132	31012133	chr6:31012133:T:C	rs9262461	T	C	T	Hoxd3_MA0912.1	8	1	-	10.31969916322266	3.431126703657298	ATGAGCCAATTAACCT
chr6	31012155	31012156	chr6:31012156:T:C	rs9380204	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	31095037	31095038	chr6:31095038:C:A	rs73388867	C	A	C	Hoxd3_MA0912.1	5	1	-	7.598193571967414	7.726988680172983	ATGAGGTCATTAGGGT
chr6	31122894	31122895	chr6:31122895:A:G	rs3094208	A	G	G	Hoxd3_MA0912.1	8	1	+	7.3240153188595	0.43544285929413795	CTGGGGTAATGAGGGG
chr6	31122921	31122922	chr6:31122922:G:A	rs138491637	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	31209641	31209642	chr6:31209642:A:G	rs9501517	A	G	A	Hoxd3_MA0912.1	9	1	-	9.479035805047515	2.590463345482152	CTGGACTAATTAGAGG
chr6	31268821	31268822	chr6:31268822:G:C	rs3189472	G	C	g	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	31353903	31353904	chr6:31353904:C:T	rs1058067	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	31353907	31353908	chr6:31353908:A:C	rs1058026	A	C	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr6	31353908	31353909	chr6:31353909:A:C	rs1049268	A	C	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	31398086	31398087	chr6:31398087:C:T	rs58749093	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr6	31398091	31398092	chr6:31398092:G:C	rs12661317	G	C	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	31467341	31467342	chr6:31467342:G:A	rs2516518	G	A	-	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	31497677	31497678	chr6:31497678:C:T	chr6:31497678:C:T	C	T	-	Hoxd3_MA0912.1	12	1	+	7.510698858254727	6.303946938249863	CTGGTCTCATTGCAGT
chr6	31541265	31541266	chr6:31541266:G:T	rs77639798	G	T	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	31541273	31541274	chr6:31541274:G:A	rs151223084	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	32190541	32190542	chr6:32190542:A:G	rs176095	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	32603912	32603913	chr6:32603913:C:T	rs9270881	C	T	.	Hoxd3_MA0912.1	7	1	+	9.149735556646645	4.343994680196737	TTGGTGTCATTAATTT
chr6	32603927	32603928	chr6:32603928:G:C	rs9270882	G	C	.	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	32613443	32613444	chr6:32613444:G:A	rs9271286	G	A	.	Hoxd3_MA0912.1	4	1	+	8.027597507730125	7.423360779217752	TGGGGGTAATTATGCT
chr6	32621835	32621836	chr6:32621836:A:G	rs9271514	A	G	.	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr6	32635863	32635864	chr6:32635864:G:C	rs9272277	G	C	.	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	32635882	32635883	chr6:32635883:T:C	rs1391373	T	C	.	Hoxd3_MA0912.1	3	1	+	9.259070428935159	8.522389206355484	CTTTGTTAATTACATC
chr6	32635890	32635891	chr6:32635891:A:C	rs1391372	A	C	.	Hoxd3_MA0912.1	11	1	+	9.259070428935159	2.51443425952283	CTTTGTTAATTACATC
chr6	32655294	32655295	chr6:32655295:A:G	rs9273320	A	G	.	Hoxd3_MA0912.1	0	1	-	8.598860277070465	8.546354779692534	TTGAGTTAATGGAAGT
chr6	32667854	32667855	chr6:32667855:A:G	rs4516985	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	32667884	32667885	chr6:32667885:C:T	rs9274605	C	T	c	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	32693737	32693738	chr6:32693738:A:C	rs2647008	A	C	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr6	32719068	32719069	chr6:32719069:T:C	rs28772317	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	32719069	32719070	chr6:32719070:G:A	rs28772318	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	32719110	32719111	chr6:32719111:A:T	rs28772319	A	T	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	32799076	32799077	chr6:32799077:G:A	rs9276734	G	A	g	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	33017635	33017636	chr6:33017636:A:G	rs1346932	A	G	A	Hoxd3_MA0912.1	4	1	+	9.67751011859725	10.281746847109623	ATTAATTAATTACCCG
chr6	33020562	33020563	chr6:33020563:C:T	rs9296067	C	T	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	33053129	33053130	chr6:33053130:T:C	rs7763404	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	33053151	33053152	chr6:33053152:A:G	rs7743129	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	33236964	33236965	chr6:33236965:G:C	rs213223	G	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	33519524	33519525	chr6:33519525:C:T	rs73741934	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	33588099	33588100	chr6:33588100:G:A	rs3846855	G	A	.	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	33601979	33601980	chr6:33601980:G:A	rs565654	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	33700079	33700080	chr6:33700080:T:C	rs572708	T	C	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	33895276	33895277	chr6:33895277:C:T	rs539276540	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	34134919	34134920	chr6:34134920:C:A	rs2046821	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	34596109	34596110	chr6:34596110:G:C	rs205261	G	C	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	34656750	34656751	chr6:34656751:A:G	rs73411992	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr6	35035001	35035002	chr6:35035002:G:A	rs9462042	G	A	G	Hoxd3_MA0912.1	15	1	+	7.221712773444648	6.380714146485432	TGGGACTCATTACCCG
chr6	35539778	35539779	chr6:35539779:C:G	rs4713888	C	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	35684731	35684732	chr6:35684732:G:A	rs187536669	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	35852129	35852130	chr6:35852130:C:T	rs9470138	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	36114838	36114839	chr6:36114839:G:A	rs72657687	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	36223929	36223930	chr6:36223930:T:C	rs6935941	T	C	C	Hoxd3_MA0912.1	11	1	-	8.122257545566196	6.336331597385204	CTGATGCAATTACAGA
chr6	36331404	36331405	chr6:36331405:G:A	rs7761392	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	36504481	36504482	chr6:36504482:A:T	rs621796	A	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	36576872	36576873	chr6:36576873:T:C	rs114258841	T	C	T	Hoxd3_MA0912.1	10	1	+	8.959444214515072	2.1797609718846442	TAGAATTAATTAGACC
chr6	36848015	36848016	chr6:36848016:T:G	rs1008027	T	G	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr6	36940381	36940382	chr6:36940382:C:T	rs72846855	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	37261508	37261509	chr6:37261509:A:G	rs9380656	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr6	37801305	37801306	chr6:37801306:C:T	rs6937655	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	38269571	38269572	chr6:38269572:G:A	rs62397020	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	38370564	38370565	chr6:38370565:G:A	rs13204569	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	38703548	38703549	chr6:38703549:G:A	rs190937785	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	38872302	38872303	chr6:38872303:T:C	rs143005131	T	C	T	Hoxd3_MA0912.1	14	1	+	9.93384552461333	10.498181970745621	CTGAGTTAATTATTTC
chr6	38935318	38935319	chr6:38935319:G:A	rs9296270	G	A	G	Hoxd3_MA0912.1	14	1	-	7.249062495270538	6.684726049138248	TTTGCCCAATTACCCC
chr6	39065403	39065404	chr6:39065404:G:A	rs910165	G	A	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	39164872	39164873	chr6:39164873:T:C	rs34074963	T	C	T	Hoxd3_MA0912.1	15	1	+	8.346088989830271	7.568384421242262	CTGGGACAATTATTGT
chr6	39388735	39388736	chr6:39388736:C:T	rs75382694	C	T	C	Hoxd3_MA0912.1	2	1	-	6.777384117411527	5.327549073254488	CCGTGGTAATGACAGC
chr6	39563909	39563910	chr6:39563910:A:G	rs62403284	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	39932763	39932764	chr6:39932764:A:G	rs62403569	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	39943169	39943170	chr6:39943170:C:T	rs62403571	C	T	C	Hoxd3_MA0912.1	12	1	+	8.9757578008897	7.769005880884836	TTGGGCCAATTACTTC
chr6	40396585	40396586	chr6:40396586:A:G	rs17619780	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	40474980	40474981	chr6:40474981:A:C	rs113182465	A	C	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	40532723	40532724	chr6:40532724:C:T	rs205504	C	T	T	Hoxd3_MA0912.1	14	1	-	10.284291434410486	9.340326104646353	CTGTTATAATTACTGT
chr6	40550122	40550123	chr6:40550123:C:G	rs375982	C	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr6	40912004	40912005	chr6:40912005:A:T	rs113491720	A	T	A	Hoxd3_MA0912.1	9	1	-	9.164853834086179	4.674176647319188	CTGATTTAATTGGCTT
chr6	41226884	41226885	chr6:41226885:C:T	rs6916157	C	T	-	Hoxd3_MA0912.1	2	1	+	7.973917165927578	8.440201014070782	CACAGCTAATTGCCCT
chr6	41328940	41328941	chr6:41328941:C:T	rs12525710	C	T	C	Hoxd3_MA0912.1	13	1	+	11.103855636126656	10.499618907614282	TTTGTTTAATTACCCT
chr6	41560830	41560831	chr6:41560831:T:C	chr6:41560831:T:C	T	C	T	Hoxd3_MA0912.1	11	1	-	8.531274003876707	6.745348055695713	GAGTATTAATTACCGT
chr6	41644561	41644562	chr6:41644562:C:G	rs72863068	C	G	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	41645414	41645415	chr6:41645415:T:A	rs530157335	T	A	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	41654569	41654570	chr6:41654570:T:C	rs79034172	T	C	T	Hoxd3_MA0912.1	10	1	+	10.499618907614282	3.719935664983854	TTTGATTAATTAATCT
chr6	41663991	41663992	chr6:41663992:T:G	rs6899312	T	G	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr6	41762820	41762821	chr6:41762821:G:C	rs114945936	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	41768524	41768525	chr6:41768525:C:G	rs142698265	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	41787730	41787731	chr6:41787731:G:A	chr6:41787731:G:A	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	41816355	41816356	chr6:41816356:C:T	rs7753507	C	T	C	Hoxd3_MA0912.1	13	1	+	9.058861049000935	8.454624320488561	CTAAATTCATTAACCT
chr6	41953502	41953503	chr6:41953503:G:T	rs10947997	G	T	G	Hoxd3_MA0912.1	12	1	-	10.851575405751591	10.851575405751591	CTGAAATAATTACCCC
chr6	42053436	42053437	chr6:42053437:C:T	rs9367127	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr6	42249361	42249362	chr6:42249362:C:A	rs58170583	C	A	C	Hoxd3_MA0912.1	12	1	-	7.569212430270994	7.329982741205161	ATCAGGTAATGAGCCT
chr6	42454717	42454718	chr6:42454718:T:A	rs260268	T	A	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	42454741	42454742	chr6:42454742:C:G	rs260267	C	G	C	Hoxd3_MA0912.1	4	1	-	10.493719934292988	8.915642023579906	CTGGGGCAATTAACTT
chr6	42889467	42889468	chr6:42889468:C:T	rs7952	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	42907726	42907727	chr6:42907727:T:C	rs9296401	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	43083161	43083162	chr6:43083162:A:G	rs79671886	A	G	G	Hoxd3_MA0912.1	1	1	-	9.077407772568206	6.993347285032076	CTTGTTTAATGACCCT
chr6	43434149	43434150	chr6:43434150:A:G	rs831313	A	G	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	43969163	43969164	chr6:43969164:G:C	rs73422246	G	C	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	44005412	44005413	chr6:44005413:C:G	rs55795851	C	G	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr6	44042931	44042932	chr6:44042932:C:T	rs750699290	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	44043809	44043810	chr6:44043810:G:T	rs77219151	G	T	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr6	44251972	44251973	chr6:44251973:A:C	rs2070695	A	C	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr6	44255554	44255555	chr6:44255555:C:T	rs35112470	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	44310854	44310855	chr6:44310855:A:G	rs10807297	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr6	44655545	44655546	chr6:44655546:C:T	rs534812044	C	T	c	Hoxd3_MA0912.1	35	0	-	0	0	.
chr6	44655577	44655578	chr6:44655578:A:G	rs1022560482	A	G	a	Hoxd3_MA0912.1	3	1	-	7.6001782204396715	6.863496997859999	CTGTCTCAATTACAGC
chr6	44869708	44869709	chr6:44869709:A:C	rs138170357	A	C	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	44869729	44869730	chr6:44869730:T:C	rs116763100	T	C	T	Hoxd3_MA0912.1	11	1	-	8.78475823757322	6.998832289392228	ATGAGATAATTATGCT
chr6	45175462	45175463	chr6:45175463:A:G	rs1748237	A	G	A	Hoxd3_MA0912.1	8	1	+	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr6	45424727	45424728	chr6:45424728:T:C	rs113084865	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	45831847	45831848	chr6:45831848:A:G	rs7770578	A	G	G	Hoxd3_MA0912.1	7	1	+	9.729103442823252	2.949420200192825	TTGTGATAATTAAATG
chr6	45831857	45831858	chr6:45831858:G:A	rs7770999	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	45930823	45930824	chr6:45930824:A:C	rs113445052	A	C	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	45966342	45966343	chr6:45966343:A:G	rs2027274	A	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	46469818	46469819	chr6:46469819:T:C	rs4711852	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	46677137	46677138	chr6:46677138:C:T	rs2270450	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	47247867	47247868	chr6:47247868:C:A	rs10080323	C	A	C	Hoxd3_MA0912.1	2	1	-	9.497919094037247	8.180728524486502	TAGAATTAATTATTCT
chr6	47253356	47253357	chr6:47253357:C:T	rs1228393639	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	47633585	47633586	chr6:47633586:C:T	rs9369720	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr6	47727677	47727678	chr6:47727678:A:C	rs2211143	A	C	A	Hoxd3_MA0912.1	15	1	-	8.71233608127439	7.888326944644696	GTGAGTCAATTAATCT
chr6	47774172	47774173	chr6:47774173:T:G	rs1312208801	T	G	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	48113581	48113582	chr6:48113582:C:T	rs6458601	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr6	48389356	48389357	chr6:48389357:A:G	rs9473341	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	48513123	48513124	chr6:48513124:C:T	rs1011882492	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr6	48726306	48726307	chr6:48726307:G:T	rs77761054	G	T	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr6	48842739	48842740	chr6:48842740:A:T	rs1938178	A	T	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	50862977	50862978	chr6:50862978:G:T	rs9381906	G	T	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	51690048	51690049	chr6:51690049:G:A	rs9357705	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	51843433	51843434	chr6:51843434:G:A	rs565558645	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	52149818	52149819	chr6:52149819:G:T	rs77129137	G	T	G	Hoxd3_MA0912.1	5	1	-	7.9200641478483655	7.38402710473588	CTTAGCTCATTACAGC
chr6	52326521	52326522	chr6:52326522:T:A	rs484763	T	A	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	52356136	52356137	chr6:52356137:C:T	rs6917990	C	T	T	Hoxd3_MA0912.1	3	1	+	7.209880910582202	7.9465621331618745	CTTCGCTCATTAGCCT
chr6	52363991	52363992	chr6:52363992:G:A	rs9382101	G	A	G	Hoxd3_MA0912.1	12	1	-	10.508899279291018	9.302147359286154	CTGAAATAATTACCAT
chr6	52401535	52401536	chr6:52401536:G:A	rs17591255	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	52589410	52589411	chr6:52589411:C:T	rs73742619	C	T	C	Hoxd3_MA0912.1	6	1	+	7.777820989747564	9.563746937928558	TAGGGACAATTACTCC
chr6	53258741	53258742	chr6:53258742:T:C	rs78510520	T	C	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr6	53361755	53361756	chr6:53361756:G:A	rs78692655	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	53361776	53361777	chr6:53361777:T:G	rs552821283	T	G	T	Hoxd3_MA0912.1	5	1	+	9.199234031478456	9.070438923272885	CTGAGTTAATTAGGTC
chr6	53616336	53616337	chr6:53616337:T:C	rs9463956	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	53616377	53616378	chr6:53616378:G:A	rs630152	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr6	54443918	54443919	chr6:54443919:G:A	rs243802	G	A	g	Hoxd3_MA0912.1	13	1	-	7.952158221392436	7.3479214928800625	TGGAGGTCATTAACGG
chr6	55072570	55072571	chr6:55072571:C:T	rs376089391	C	T	C	Hoxd3_MA0912.1	15	1	-	6.419581966260645	5.578583339301429	CTGACCTCATGACCCG
chr6	55117649	55117650	chr6:55117650:A:G	rs12207088	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	55395557	55395558	chr6:55395558:G:T	rs16886684	G	T	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	55521061	55521062	chr6:55521062:G:A	rs62405369	G	A	G	Hoxd3_MA0912.1	5	1	+	10.111836805859035	9.387273429065711	ATGACGTAATTAAACT
chr6	56245938	56245939	chr6:56245939:G:A	rs7769092	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	56277870	56277871	chr6:56277871:G:T	rs141081662	G	T	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	56576666	56576667	chr6:56576667:C:T	rs6931836	C	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	56818168	56818169	chr6:56818169:A:C	rs36022925	A	C	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	56852928	56852929	chr6:56852929:T:A	rs13198597	T	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr6	57070125	57070126	chr6:57070126:T:G	rs982811937	T	G	t	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	57315326	57315327	chr6:57315327:C:T	rs75441032	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	58180246	58180247	chr6:58180247:C:T	rs11211685	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	58402498	58402499	chr6:58402499:C:A	rs111370950	C	A	.	Hoxd3_MA0912.1	7	1	+	8.130999156999868	10.104941523180388	CTGGTCTCATTAATTC
chr6	60431845	60431846	chr6:60431846:C:T	rs2397527	C	T	C	Hoxd3_MA0912.1	3	1	-	8.474760827092673	8.588858578131697	AAGGGATAATTAAGGT
chr6	60950464	60950465	chr6:60950465:A:G	rs3125358	A	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	61880969	61880970	chr6:61880970:A:G	rs953703	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	62410215	62410216	chr6:62410216:A:G	rs2814645	A	G	G	Hoxd3_MA0912.1	7	1	+	7.71474400119138	0.9350607585609516	TTGCTGCAATTACAGG
chr6	62679976	62679977	chr6:62679977:A:C	rs9352010	A	C	A	Hoxd3_MA0912.1	3	1	-	10.246190087023177	10.696428782116445	TTGTATTAATTAAAAT
chr6	63079294	63079295	chr6:63079295:T:C	rs1086302	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	63537425	63537426	chr6:63537426:G:T	chr6:63537426:G:T	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	64143765	64143766	chr6:64143766:T:C	rs4426982	T	C	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	64302439	64302440	chr6:64302440:T:G	rs6454782	T	G	T	Hoxd3_MA0912.1	1	1	+	8.32224755457748	6.238187067041351	CTTATCTAATTAGTGC
chr6	64405229	64405230	chr6:64405230:T:C	rs79649990	T	C	T	Hoxd3_MA0912.1	8	1	-	9.610390196489375	2.721817736924013	ATGGGTTAATTAAGAT
chr6	64563601	64563602	chr6:64563602:T:C	rs16880108	T	C	.	Hoxd3_MA0912.1	17	0	-	0	0	.
chr6	64669949	64669950	chr6:64669950:C:T	rs1338821	C	T	C	Hoxd3_MA0912.1	11	1	-	8.68254102086817	10.468466969049164	CTATGTTAATTGCTCT
chr6	65307031	65307032	chr6:65307032:G:A	rs369111629	G	A	g	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	65322096	65322097	chr6:65322097:T:C	rs9345607	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	65368184	65368185	chr6:65368185:C:A	rs10455580	C	A	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	65725649	65725650	chr6:65725650:G:A	rs6910313	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	65725661	65725662	chr6:65725662:G:A	rs6910322	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	65961281	65961282	chr6:65961282:T:A	rs17525961	T	A	T	Hoxd3_MA0912.1	13	1	-	7.533790780499277	7.533790780499277	CTGTGATAATTGGACC
chr6	67210738	67210739	chr6:67210739:C:T	rs12153854	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr6	67895595	67895596	chr6:67895596:C:T	rs940470264	C	T	C	Hoxd3_MA0912.1	2	1	-	8.823978951977102	7.374143907820063	CTGTTTTAATGACCAT
chr6	68729684	68729685	chr6:68729685:G:T	rs10945138	G	T	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	68751805	68751806	chr6:68751806:T:C	rs12201488	T	C	T	Hoxd3_MA0912.1	11	1	-	9.451298333763667	7.665372385582675	TTAAAATAATTACAGT
chr6	69040049	69040050	chr6:69040050:G:A	rs530397537	G	A	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	70412735	70412736	chr6:70412736:C:T	rs139543007	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	70651198	70651199	chr6:70651199:C:T	rs149654577	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	70973921	70973922	chr6:70973922:T:C	rs6930956	T	C	T	Hoxd3_MA0912.1	3	1	+	10.051439742084332	9.31475851950466	TAGTGGTAATTAATTT
chr6	71675607	71675608	chr6:71675608:G:A	rs4706488	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	72205014	72205015	chr6:72205015:A:G	rs2463754	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	72208916	72208917	chr6:72208917:A:C	rs9351900	A	C	A	Hoxd3_MA0912.1	9	1	-	9.619998398415717	5.129321211648725	TTGAGGCAATTACTGG
chr6	72559334	72559335	chr6:72559335:A:G	rs1202122	A	G	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	72617629	72617630	chr6:72617630:G:A	rs10485212	G	A	G	Hoxd3_MA0912.1	2	1	+	10.848627880542777	9.398792836385738	CTGAAATAATTACTGT
chr6	72716405	72716406	chr6:72716406:C:G	rs9293898	C	G	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	72851369	72851370	chr6:72851370:A:G	rs76756692	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	72931774	72931775	chr6:72931775:T:C	rs112916680	T	C	T	Hoxd3_MA0912.1	8	1	-	7.845736686860895	0.9571642272955321	GTGAGGCAATTACCTC
chr6	73557209	73557210	chr6:73557210:C:G	chr6:73557210:C:G	C	G	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	73885543	73885544	chr6:73885544:C:T	rs73466404	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	74000582	74000583	chr6:74000583:A:G	rs9352046	A	G	a	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	74578520	74578521	chr6:74578521:G:A	rs902949972	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	74578566	74578567	chr6:74578567:T:C	rs493138	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	74705713	74705714	chr6:74705714:A:C	rs2485118	A	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	74872028	74872029	chr6:74872029:T:C	rs9447328	T	C	T	Hoxd3_MA0912.1	0	1	-	9.468447430464403	8.1479996351421	ATGATTCAATTACCTT
chr6	75494001	75494002	chr6:75494002:T:C	rs561189200	T	C	T	Hoxd3_MA0912.1	9	1	+	9.74443985168167	2.8558673921163096	CAGAGGTAATTATTGT
chr6	75600802	75600803	chr6:75600803:A:G	rs11967957	A	G	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr6	75853913	75853914	chr6:75853914:G:A	rs7742567	G	A	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	75942545	75942546	chr6:75942546:C:G	rs2313753	C	G	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	76221083	76221084	chr6:76221084:T:C	rs60661808	T	C	T	Hoxd3_MA0912.1	5	1	-	9.70785267627648	10.432416053069804	CTTAAATAATTACTCT
chr6	77536412	77536413	chr6:77536413:T:C	rs2609056	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr6	77938859	77938860	chr6:77938860:G:C	rs9343698	G	C	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	78156180	78156181	chr6:78156181:G:C	rs9361376	G	C	G	Hoxd3_MA0912.1	13	1	-	9.24401102098516	7.665933110272077	TTTATTTAATGAACCT
chr6	78235716	78235717	chr6:78235717:C:T	rs946139	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	78936857	78936858	chr6:78936858:A:G	rs1044309	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	79478081	79478082	chr6:79478082:G:C	rs72899927	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	79647883	79647884	chr6:79647884:C:T	rs62413425	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr6	80032913	80032914	chr6:80032914:A:T	rs61795	A	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	80194424	80194425	chr6:80194425:A:G	rs77899872	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	80281063	80281064	chr6:80281064:A:G	rs646369	A	G	G	Hoxd3_MA0912.1	3	1	-	8.39877312444618	7.662091901866507	ATGTACTCATTACCTT
chr6	80454545	80454546	chr6:80454546:G:A	rs1008084892	G	A	G	Hoxd3_MA0912.1	13	1	-	7.670095947369695	7.06585921885732	CTCAGCTCATTACCTC
chr6	80962965	80962966	chr6:80962966:T:C	rs9361693	T	C	C	Hoxd3_MA0912.1	5	1	+	9.688446973458895	9.371125531572487	TTGAGTCAATTAACCA
chr6	81688203	81688204	chr6:81688204:A:T	rs1145872	A	T	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	81767070	81767071	chr6:81767071:A:G	rs958466418	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	82095395	82095396	chr6:82095396:C:T	rs74319867	C	T	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	82208157	82208158	chr6:82208158:T:A	rs4706941	T	A	A	Hoxd3_MA0912.1	0	1	+	9.593350517868148	8.87691638592941	TTATGTTAATTAGCTT
chr6	82208186	82208187	chr6:82208187:A:C	rs4706942	A	C	A	Hoxd3_MA0912.1	11	1	+	9.897456196165773	3.152820026753444	TTGTGGTAATTATCTC
chr6	82260246	82260247	chr6:82260247:T:A	rs544551	T	A	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	82494674	82494675	chr6:82494675:G:C	rs6934417	G	C	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	82608002	82608003	chr6:82608003:C:A	rs285978	C	A	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	82833088	82833089	chr6:82833089:C:G	rs209409	C	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	82862274	82862275	chr6:82862275:C:T	rs9353114	C	T	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr6	82862275	82862276	chr6:82862276:A:G	rs6454307	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	82955064	82955065	chr6:82955065:G:A	rs59491134	G	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	83042591	83042592	chr6:83042592:C:T	rs148234966	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	83411993	83411994	chr6:83411994:C:G	rs3798887	C	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	83474752	83474753	chr6:83474753:A:G	rs4706178	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	83615160	83615161	chr6:83615161:G:A	rs77884199	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	83615161	83615162	chr6:83615162:A:C	chr6:83615162:A:C	A	C	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	84618131	84618132	chr6:84618132:G:A	rs17190487	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	84658194	84658195	chr6:84658195:C:T	rs13200477	C	T	C	Hoxd3_MA0912.1	15	1	+	8.464526186299215	9.242230754887224	CAATATTAATTACCCC
chr6	85472807	85472808	chr6:85472808:A:C	rs111716815	A	C	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	86201259	86201260	chr6:86201260:C:T	rs6910532	C	T	C	Hoxd3_MA0912.1	14	1	-	8.713973693051633	7.7700083632875	CTATCTTAATTACTGT
chr6	86207063	86207064	chr6:86207064:A:C	rs2151988	A	C	A	Hoxd3_MA0912.1	3	1	-	8.283705861748793	8.73394455684206	CTGTGGTCATTAGATT
chr6	86512162	86512163	chr6:86512163:C:G	rs61369689	C	G	C	Hoxd3_MA0912.1	12	1	-	9.039704210983372	10.007226441922402	CAGAAGTAATTAGCAT
chr6	86757156	86757157	chr6:86757157:A:G	rs1325177	A	G	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	86757165	86757166	chr6:86757166:C:G	rs4706282	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	87102085	87102086	chr6:87102086:C:T	rs9294366	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	87115590	87115591	chr6:87115591:T:A	rs1075068	T	A	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	87333921	87333922	chr6:87333922:G:A	rs446851	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	87473753	87473754	chr6:87473754:A:G	rs868464057	A	G	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	87502335	87502336	chr6:87502336:A:C	rs2300908	A	C	A	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	87579303	87579304	chr6:87579304:C:T	rs150994944	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	87904767	87904768	chr6:87904768:C:G	rs73752092	C	G	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr6	88009441	88009442	chr6:88009442:A:G	rs80268290	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	88534711	88534712	chr6:88534712:T:A	rs6454705	T	A	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	88557656	88557657	chr6:88557657:G:A	rs725050	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	88984447	88984448	chr6:88984448:A:G	rs4707504	A	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	89243463	89243464	chr6:89243464:G:T	rs9444679	G	T	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	89277324	89277325	chr6:89277325:G:A	rs2183796	G	A	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	89376174	89376175	chr6:89376175:A:G	rs76514114	A	G	A	Hoxd3_MA0912.1	6	1	-	9.63669766306524	7.850771714884246	CTGTTATAATTAAACG
chr6	89469025	89469026	chr6:89469026:G:A	rs7766304	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	90098284	90098285	chr6:90098285:A:C	rs85706	A	C	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr6	90198179	90198180	chr6:90198180:C:T	rs927183	C	T	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	90198189	90198190	chr6:90198190:C:T	rs62408214	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	90288602	90288603	chr6:90288603:A:G	rs644940	A	G	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	90295007	90295008	chr6:90295008:C:G	chr6:90295008:C:G	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr6	90496730	90496731	chr6:90496731:T:G	rs1191496539	T	G	T	Hoxd3_MA0912.1	11	1	-	8.623527571273653	1.8788914018613239	CTGATGCAATTACCAG
chr6	90496745	90496746	chr6:90496746:G:C	rs284507	G	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	90538709	90538710	chr6:90538710:A:C	rs1046272711	A	C	A	Hoxd3_MA0912.1	5	1	-	8.775786472381018	8.646991364175447	CTGTTTTAATGACATT
chr6	90632752	90632753	chr6:90632753:T:C	rs2039108	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	90675706	90675707	chr6:90675707:T:C	rs17592434	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	91130893	91130894	chr6:91130894:G:A	rs9362833	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	91159528	91159529	chr6:91159529:G:A	rs4371829	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	91172616	91172617	chr6:91172617:A:G	rs6942007	A	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr6	91292934	91292935	chr6:91292935:A:G	rs9345125	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	91353051	91353052	chr6:91353052:A:T	rs370320177	A	T	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	92126256	92126257	chr6:92126257:A:T	rs9444953	A	T	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	92377674	92377675	chr6:92377675:C:T	rs148753089	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	92450531	92450532	chr6:92450532:T:C	rs2730838	T	C	C	Hoxd3_MA0912.1	4	1	-	7.591503585297664	8.195740313810038	TTGGACTCATGACCTT
chr6	92775959	92775960	chr6:92775960:C:T	rs73522116	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr6	92779921	92779922	chr6:92779922:G:A	rs115345609	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	93125884	93125885	chr6:93125885:C:T	rs11964110	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	93342046	93342047	chr6:93342047:C:T	rs7751214	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	93561229	93561230	chr6:93561230:T:A	rs59599909	T	A	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	93915058	93915059	chr6:93915059:G:A	rs62414883	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	93942598	93942599	chr6:93942599:T:A	rs55744359	T	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	94478554	94478555	chr6:94478555:C:T	rs9445285	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	94590652	94590653	chr6:94590653:C:G	rs34888999	C	G	C	Hoxd3_MA0912.1	2	1	-	7.9999698153474075	6.2164953976534605	CTGTTTTAATGACCAG
chr6	95182886	95182887	chr6:95182887:C:A	rs1397078445	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	95687155	95687156	chr6:95687156:G:C	rs4380759	G	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	96147707	96147708	chr6:96147708:G:A	rs4278030	G	A	G	Hoxd3_MA0912.1	2	1	+	8.426709040376815	6.976873996219777	CTGTGCTAATTGAATG
chr6	96166226	96166227	chr6:96166227:C:G	rs9390961	C	G	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	97040781	97040782	chr6:97040782:C:T	rs1737642	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	97989898	97989899	chr6:97989899:T:C	rs4240559	T	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	99026237	99026238	chr6:99026238:T:A	rs4839994	T	A	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	99823443	99823444	chr6:99823444:T:C	rs72929510	T	C	T	Hoxd3_MA0912.1	10	1	+	9.10602678921273	2.326343546582304	ATGGTATAATTAGCCC
chr6	100300122	100300123	chr6:100300123:G:A	rs7763138	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	100947143	100947144	chr6:100947144:T:C	rs638884	T	C	T	Hoxd3_MA0912.1	1	1	+	8.509429820234631	6.4253693326985	CTGGGGTAATTGATAG
chr6	100952121	100952122	chr6:100952122:T:G	rs678988	T	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr6	100952122	100952123	chr6:100952123:G:C	rs7774890	G	C	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	101428779	101428780	chr6:101428780:C:T	rs72957647	C	T	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	101452237	101452238	chr6:101452238:T:C	rs2518160	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	101539498	101539499	chr6:101539499:T:G	rs3918497	T	G	T	Hoxd3_MA0912.1	11	1	-	9.303232330779116	2.5585961613667862	TTTAGGCAATTAATCT
chr6	102029941	102029942	chr6:102029942:G:A	rs9498808	G	A	a	Hoxd3_MA0912.1	27	0	-	0	0	.
chr6	102220483	102220484	chr6:102220484:G:A	rs565436401	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	102539761	102539762	chr6:102539762:A:G	rs6931448	A	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	103143158	103143159	chr6:103143159:G:A	rs523819	G	A	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr6	103381340	103381341	chr6:103381341:G:T	rs35158706	G	T	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	103769614	103769615	chr6:103769615:T:C	rs115108736	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	103938799	103938800	chr6:103938800:T:C	rs9377587	T	C	C	Hoxd3_MA0912.1	15	1	+	9.111366546378866	8.333661977790857	TTAATTTAATGAACCT
chr6	104230492	104230493	chr6:104230493:G:C	rs57806848	G	C	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	104847771	104847772	chr6:104847772:C:T	rs12203954	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr6	105505443	105505444	chr6:105505444:C:A	rs12215042	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	105798782	105798783	chr6:105798783:A:G	rs9320132	A	G	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr6	105832578	105832579	chr6:105832579:G:T	rs73510155	G	T	G	Hoxd3_MA0912.1	6	1	-	8.414059240231042	5.862294127317995	CAGAGGCAATTAGCTT
chr6	105846404	105846405	chr6:105846405:G:A	rs111639311	G	A	G	Hoxd3_MA0912.1	1	1	+	9.088093643928174	9.945917917302364	CGGAGGCAATTACCCT
chr6	106431593	106431594	chr6:106431594:C:A	rs910687	C	A	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr6	106452712	106452713	chr6:106452713:A:G	rs9373867	A	G	A	Hoxd3_MA0912.1	11	1	+	9.133472182488257	7.347546234307265	CTGACTTAATTATATT
chr6	106488822	106488823	chr6:106488823:T:G	rs9398092	T	G	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	106561214	106561215	chr6:106561215:G:A	rs965347	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr6	106561243	106561244	chr6:106561244:A:G	rs4946764	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	106622575	106622576	chr6:106622576:G:A	rs6925512	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	106689328	106689329	chr6:106689329:T:A	rs9384630	T	A	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	106799630	106799631	chr6:106799631:T:C	chr6:106799631:T:C	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	106849981	106849982	chr6:106849982:C:A	rs272584	C	A	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	107414296	107414297	chr6:107414297:A:T	rs319087	A	T	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	107678259	107678260	chr6:107678260:G:A	rs9373961	G	A	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	107686863	107686864	chr6:107686864:T:C	rs1001374	T	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	107958582	107958583	chr6:107958583:C:G	chr6:107958583:C:G	C	G	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	107958582	107958583	chr6:107958583:C:T	rs578217400	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	108435678	108435679	chr6:108435679:T:A	rs74336401	T	A	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr6	108532402	108532403	chr6:108532403:T:C	rs4946925	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr6	110728638	110728639	chr6:110728639:A:T	rs78444365	A	T	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	110876787	110876788	chr6:110876788:C:G	rs75275509	C	G	C	Hoxd3_MA0912.1	1	1	+	8.63802891749771	8.63802891749771	TCAGGATAATTAACCT
chr6	111184295	111184296	chr6:111184296:C:T	rs12214550	C	T	C	Hoxd3_MA0912.1	13	1	+	8.312908781525849	7.7086720530134745	ATGTATTCATTAGCCT
chr6	111291058	111291059	chr6:111291059:C:G	rs373673	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	111337167	111337168	chr6:111337168:G:T	rs118202	G	T	T	Hoxd3_MA0912.1	0	1	-	9.86423024053679	9.200301605975984	CTATTTTAATTACTCT
chr6	111551951	111551952	chr6:111551952:C:T	rs189778623	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	111580566	111580567	chr6:111580567:C:T	rs2075967	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	111663805	111663806	chr6:111663806:T:A	rs9374270	T	A	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr6	111748135	111748136	chr6:111748136:G:A	rs117050043	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	111789095	111789096	chr6:111789096:T:C	chr6:111789096:T:C	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	111985611	111985612	chr6:111985612:T:C	rs74581555	T	C	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr6	111987358	111987359	chr6:111987359:A:G	rs672955	A	G	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	112042556	112042557	chr6:112042557:A:G	rs990601	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	112042589	112042590	chr6:112042590:T:C	rs2673311	T	C	C	Hoxd3_MA0912.1	0	1	-	10.592473610615748	9.272025815293444	AAGAGTTAATTAATCT
chr6	112042603	112042604	chr6:112042604:G:A	rs9487799	G	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	112152448	112152449	chr6:112152449:C:T	rs12192292	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	112269479	112269480	chr6:112269480:A:G	rs17680579	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	112405469	112405470	chr6:112405470:A:G	rs1935700	A	G	A	Hoxd3_MA0912.1	6	1	-	9.034810905169596	7.248884956988605	ATCAGTTAATTAATGG
chr6	112770925	112770926	chr6:112770926:A:G	rs4947202	A	G	C	Hoxd3_MA0912.1	3	1	+	9.996874715143084	9.88277696410406	CTTATTTAATTAAATT
chr6	113148609	113148610	chr6:113148610:C:T	rs2502386	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	113458849	113458850	chr6:113458850:C:A	rs1469605627	C	A	C	Hoxd3_MA0912.1	0	1	+	7.507242097801939	6.843313463241133	CTGGGCCAATGAACTG
chr6	113676327	113676328	chr6:113676328:C:T	rs150914948	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	113865695	113865696	chr6:113865696:C:A	rs74717803	C	A	C	Hoxd3_MA0912.1	12	1	-	8.974466472219515	8.735236783153681	TTGGGGTAATTGGATT
chr6	114081174	114081175	chr6:114081175:T:C	rs11153462	T	C	c	Hoxd3_MA0912.1	6	1	+	8.764567393006645	6.978641444825655	CCGAAATAATTACAGT
chr6	114277507	114277508	chr6:114277508:A:G	rs72956225	A	G	A	Hoxd3_MA0912.1	13	1	-	10.284291434410486	10.88852816292286	CTGTTATAATTACTGT
chr6	114364710	114364711	chr6:114364711:G:A	rs9384899	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	114386935	114386936	chr6:114386936:A:C	rs760609	A	C	C	Hoxd3_MA0912.1	5	1	-	8.160885229331736	8.032090121126165	CTCTGTTAATGACACT
chr6	114621799	114621800	chr6:114621800:C:T	rs9387225	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	115336222	115336223	chr6:115336223:T:G	rs11153550	T	G	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr6	115585150	115585151	chr6:115585151:C:T	rs10046209	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	115870418	115870419	chr6:115870419:G:A	rs12206693	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr6	115891534	115891535	chr6:115891535:C:T	rs13212974	C	T	C	Hoxd3_MA0912.1	0	1	+	9.380023200893392	9.432528698271323	CTGTTTTCATTAACTT
chr6	116047649	116047650	chr6:116047650:G:A	rs12524249	G	A	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	116166052	116166053	chr6:116166053:A:G	rs375597221	A	G	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	116244561	116244562	chr6:116244562:C:A	rs15679	C	A	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	116629570	116629571	chr6:116629571:G:A	rs6927567	G	A	g	Hoxd3_MA0912.1	15	1	-	8.873539904264192	9.6512444728522	TTGAACCAATTACAGC
chr6	117317613	117317614	chr6:117317614:T:C	rs111784593	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	117451926	117451927	chr6:117451927:G:A	rs6939463	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	117669121	117669122	chr6:117669122:G:A	rs543276491	G	A	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	118681417	118681418	chr6:118681418:A:T	rs17349301	A	T	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	118791728	118791729	chr6:118791729:G:A	rs933028457	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	118791880	118791881	chr6:118791881:G:A	rs11752609	G	A	g	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr6	119241208	119241209	chr6:119241209:T:C	rs117377370	T	C	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	119241209	119241210	chr6:119241210:T:C	rs188076692	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	119278281	119278282	chr6:119278282:A:T	rs6922115	A	T	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	119296447	119296448	chr6:119296448:C:T	rs6569067	C	T	T	Hoxd3_MA0912.1	4	1	-	10.430288223688965	9.826051495176591	CTAAGTTAATTATCCT
chr6	120141816	120141817	chr6:120141817:G:A	rs79423570	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	120141858	120141859	chr6:120141859:C:T	rs568943765	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr6	120187364	120187365	chr6:120187365:G:T	rs78745107	G	T	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	120498752	120498753	chr6:120498753:G:A	rs76514106	G	A	G	Hoxd3_MA0912.1	13	1	-	9.2159148040984	8.611678075586026	TTTTTCTAATTACCAT
chr6	120857666	120857667	chr6:120857667:C:T	rs10457406	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	120953126	120953127	chr6:120953127:C:G	rs12209972	C	G	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	121334437	121334438	chr6:121334438:G:A	rs9482132	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	121334470	121334471	chr6:121334471:G:A	rs113208869	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	121334470	121334471	chr6:121334471:G:C	chr6:121334471:G:C	G	C	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	121398294	121398295	chr6:121398295:A:G	rs6935739	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	121427212	121427213	chr6:121427213:T:C	rs76134489	T	C	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr6	121437337	121437338	chr6:121437338:C:A	rs10452640	C	A	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	121961212	121961213	chr6:121961213:T:C	rs79070191	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	121967794	121967795	chr6:121967795:G:A	rs7747083	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	121992119	121992120	chr6:121992120:A:G	rs9490378	A	G	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	122027095	122027096	chr6:122027096:G:A	rs76250263	G	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr6	122116252	122116253	chr6:122116253:T:G	chr6:122116253:T:G	T	G	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	122753577	122753578	chr6:122753578:G:A	rs76227851	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	122817655	122817656	chr6:122817656:G:A	rs12665499	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	123136773	123136774	chr6:123136774:G:T	rs4445075	G	T	G	Hoxd3_MA0912.1	12	1	-	8.690742861876394	8.690742861876394	ATGATTCAATTACCTC
chr6	123352309	123352310	chr6:123352310:G:T	rs9375250	G	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr6	123509441	123509442	chr6:123509442:A:T	rs4510699	A	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	123765084	123765085	chr6:123765085:G:C	rs141940013	G	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr6	124125974	124125975	chr6:124125975:C:T	rs163294	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	124126024	124126025	chr6:124126025:A:G	rs163293	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	124189781	124189782	chr6:124189782:C:T	rs1916786	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	124595858	124595859	chr6:124595859:A:G	rs472059	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	124997556	124997557	chr6:124997557:C:G	rs1334427	C	G	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	125201215	125201216	chr6:125201216:C:T	rs73771270	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	125637558	125637559	chr6:125637559:T:C	rs149185421	T	C	t	Hoxd3_MA0912.1	1	1	+	8.835771083479644	6.751710595943514	ATGGGGCAATTACTGC
chr6	125974339	125974340	chr6:125974340:C:T	rs143981895	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr6	125974364	125974365	chr6:125974365:T:C	rs183198714	T	C	T	Hoxd3_MA0912.1	10	1	+	9.387273429065711	2.6075901864352833	ATGACATAATTAATCT
chr6	126096230	126096231	chr6:126096231:T:C	rs6926385	T	C	T	Hoxd3_MA0912.1	2	1	+	8.06439090161933	7.5981070534761255	CATTGGCAATTAACCT
chr6	127487909	127487910	chr6:127487910:C:A	rs514064	C	A	C	Hoxd3_MA0912.1	12	1	-	8.560617105573805	8.32138741650797	CTGTTTTAATTGGTCT
chr6	127963625	127963626	chr6:127963626:G:A	rs802721	G	A	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	128245175	128245176	chr6:128245176:C:T	rs9784880	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	128258702	128258703	chr6:128258703:G:A	rs1738276	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	128480156	128480157	chr6:128480157:C:T	rs9491965	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	128870868	128870869	chr6:128870869:A:G	rs17056619	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	129243798	129243799	chr6:129243799:G:A	rs265387	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	129583974	129583975	chr6:129583975:A:C	rs75460962	A	C	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	129689996	129689997	chr6:129689997:C:A	rs2051631	C	A	A	Hoxd3_MA0912.1	15	1	+	9.142880535727436	8.255577340726534	TTTAAGTAATTACATC
chr6	130020413	130020414	chr6:130020414:G:T	rs56213946	G	T	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr6	130276754	130276755	chr6:130276755:A:G	rs4897395	A	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr6	130296858	130296859	chr6:130296859:C:A	rs73609115	C	A	C	Hoxd3_MA0912.1	4	1	-	7.533840545780389	6.929603817268015	TAGGGCTCATGACCCT
chr6	130560073	130560074	chr6:130560074:A:C	rs4144216	A	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	130561440	130561441	chr6:130561441:A:G	rs7768049	A	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr6	130604834	130604835	chr6:130604835:C:T	rs1933756	C	T	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	130654646	130654647	chr6:130654647:C:T	rs775225058	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	130723281	130723282	chr6:130723282:C:T	rs76974337	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	130723304	130723305	chr6:130723305:G:A	rs1396250	G	A	G	Hoxd3_MA0912.1	1	1	-	9.794341243289988	11.87840173082612	CCGATTTAATTAATCT
chr6	130967384	130967385	chr6:130967385:C:T	rs66773803	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	130969333	130969334	chr6:130969334:G:T	rs9372985	G	T	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	131103984	131103985	chr6:131103985:T:C	rs117828911	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr6	131398275	131398276	chr6:131398276:C:T	rs17060229	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr6	131510338	131510339	chr6:131510339:T:G	rs2608932	T	G	T	Hoxd3_MA0912.1	14	1	-	7.353891171296075	8.474271866344656	CTGGAGTCATTAGCAG
chr6	131510365	131510366	chr6:131510366:C:T	rs9493008	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	131761398	131761399	chr6:131761399:C:T	rs7740856	C	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr6	131766930	131766931	chr6:131766931:C:T	rs7744039	C	T	C	Hoxd3_MA0912.1	14	1	+	8.875741741199821	8.311405295067532	CTGGAGTAATTGAGCT
chr6	131892546	131892547	chr6:131892547:A:G	rs73778611	A	G	A	Hoxd3_MA0912.1	1	1	-	8.687725323200297	6.603664835664166	CTGGTGTAATGAAGCT
chr6	131947231	131947232	chr6:131947232:G:A	rs79044527	G	A	G	Hoxd3_MA0912.1	1	1	+	8.239629796613002	9.097454069987194	CGTTGCTAATTACCTT
chr6	132062759	132062760	chr6:132062760:G:T	rs13209246	G	T	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	132062762	132062763	chr6:132062763:C:T	rs13209044	C	T	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	132392215	132392216	chr6:132392216:T:A	rs760513192	T	A	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	132392229	132392230	chr6:132392230:G:A	rs746429929	G	A	G	Hoxd3_MA0912.1	1	1	+	7.182839246703836	8.040663520078025	CGGCAGCAATTACCCT
chr6	132392249	132392250	chr6:132392250:T:A	rs79276614	T	A	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr6	132631107	132631108	chr6:132631108:G:A	rs34951745	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	132730620	132730621	chr6:132730621:A:C	rs6569839	A	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	132730650	132730651	chr6:132730651:C:G	rs549223333	C	G	C	Hoxd3_MA0912.1	3	1	-	10.077276900232542	8.890356982559602	CTGGGCTAATGAAACT
chr6	132791949	132791950	chr6:132791950:G:A	rs529464281	G	A	g	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr6	133646495	133646496	chr6:133646496:T:C	rs74533765	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	133763927	133763928	chr6:133763928:T:C	rs141644637	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	133779906	133779907	chr6:133779907:T:G	rs17062853	T	G	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	134051011	134051012	chr6:134051012:C:G	rs2811688	C	G	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	134098314	134098315	chr6:134098315:T:C	rs4576270	T	C	C	Hoxd3_MA0912.1	3	1	+	8.815185495474465	8.078504272894792	CTTTATCAATTACCCT
chr6	134120510	134120511	chr6:134120511:G:C	rs17063385	G	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	134178779	134178780	chr6:134178780:A:G	rs118136327	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	134421182	134421183	chr6:134421183:C:T	rs77049845	C	T	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr6	134432335	134432336	chr6:134432336:A:T	rs13200850	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	134822052	134822053	chr6:134822053:G:A	rs77792575	G	A	A	Hoxd3_MA0912.1	5	1	+	9.87967108891312	9.155107712119797	TTGTTGCAATTACCGT
chr6	134875458	134875459	chr6:134875459:T:C	rs112987211	T	C	T	Hoxd3_MA0912.1	7	1	-	9.62501737457783	2.845334131947403	AAGGTATAATTACCCT
chr6	135079426	135079427	chr6:135079427:G:A	rs9389263	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	135093711	135093712	chr6:135093712:G:A	rs55731938	G	A	g	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	135166944	135166945	chr6:135166945:G:A	rs61593090	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	135902848	135902849	chr6:135902849:C:A	rs9483888	C	A	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	135906755	135906756	chr6:135906756:T:C	rs149417103	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr6	135940904	135940905	chr6:135940905:C:T	rs883799	C	T	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	136123794	136123795	chr6:136123795:T:C	rs186818435	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	136445287	136445288	chr6:136445288:T:C	rs78854600	T	C	C	Hoxd3_MA0912.1	9	1	+	7.292957368059447	0.404384908494084	CTGCTGCAATGAACCT
chr6	136641694	136641695	chr6:136641695:G:A	rs6912397	G	A	A	Hoxd3_MA0912.1	14	1	+	8.631726660216552	7.6877613304524175	CTGAAGTCATTAGTGT
chr6	136728616	136728617	chr6:136728617:A:T	rs6906091	A	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	136784420	136784421	chr6:136784421:C:T	rs139967096	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	136970111	136970112	chr6:136970112:C:T	rs111388793	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	136970142	136970143	chr6:136970143:A:C	rs6937795	A	C	A	Hoxd3_MA0912.1	15	1	+	7.929068457162311	8.816371652163213	CTGAGGCAATTAAGCA
chr6	136970157	136970158	chr6:136970158:T:G	rs6917676	T	G	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	136970272	136970273	chr6:136970273:A:G	rs142708510	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	136983289	136983290	chr6:136983290:T:C	rs947733	T	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	137264907	137264908	chr6:137264908:T:C	rs12176587	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	137264920	137264921	chr6:137264921:T:C	rs12176588	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	137267862	137267863	chr6:137267863:T:C	rs9494704	T	C	T	Hoxd3_MA0912.1	12	1	+	8.469363163320033	9.676115083324897	CTGGTGTAATTGTCCC
chr6	137304603	137304604	chr6:137304604:C:G	rs9494717	C	G	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	137390675	137390676	chr6:137390676:G:A	rs4896265	G	A	G	Hoxd3_MA0912.1	13	1	+	8.596649967179255	9.570491149379963	CTCTGTTAATTACGTT
chr6	137480587	137480588	chr6:137480588:G:C	rs7767327	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	137915839	137915840	chr6:137915840:T:C	rs4895498	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	138021574	138021575	chr6:138021575:C:A	rs4291109	C	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr6	138128417	138128418	chr6:138128418:T:C	rs7773257	T	C	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	138180366	138180367	chr6:138180367:T:C	rs117310657	T	C	T	Hoxd3_MA0912.1	9	1	+	8.679119200603063	1.790546741037701	TTGTGCTAATGAATGG
chr6	138348444	138348445	chr6:138348445:T:C	rs28562699	T	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	138348473	138348474	chr6:138348474:T:C	rs67814410	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	138873503	138873504	chr6:138873504:A:G	rs77241509	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	139117841	139117842	chr6:139117842:T:C	rs2876399	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	139187117	139187118	chr6:139187118:A:G	rs9495372	A	G	A	Hoxd3_MA0912.1	8	1	+	8.147919576432336	1.2593471168669739	CTGTGTCAATTATACC
chr6	139316736	139316737	chr6:139316737:C:T	rs7775616	C	T	T	Hoxd3_MA0912.1	3	1	+	7.662238503813449	8.398919726393121	CTGCTGCAATTAATGG
chr6	139339249	139339250	chr6:139339250:T:C	rs114524011	T	C	T	Hoxd3_MA0912.1	4	1	-	9.85755591378569	10.461792642298064	TTGTAGTAATTATCCC
chr6	139920096	139920097	chr6:139920097:A:T	rs551053887	A	T	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	139920134	139920135	chr6:139920135:G:A	rs627705	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	140052096	140052097	chr6:140052097:T:C	chr6:140052097:T:C	T	C	T	Hoxd3_MA0912.1	0	1	-	11.10037534522629	9.779927549903986	ATGGTTTAATTAATCT
chr6	140320260	140320261	chr6:140320261:C:G	rs1245367892	C	G	C	Hoxd3_MA0912.1	15	1	+	7.380035810454608	7.333731242412921	ATGAGCTCATGAACCC
chr6	140643335	140643336	chr6:140643336:G:A	rs57990187	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	142326918	142326919	chr6:142326919:A:T	rs1418201	A	T	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr6	142396145	142396146	chr6:142396146:C:G	rs6900233	C	G	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr6	142435258	142435259	chr6:142435259:G:A	rs76273058	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr6	142484440	142484441	chr6:142484441:G:A	rs112248401	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	142542762	142542763	chr6:142542763:C:T	rs115973605	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr6	142542805	142542806	chr6:142542806:C:T	rs181942617	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	142801533	142801534	chr6:142801534:C:T	rs516300	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	142820554	142820555	chr6:142820555:A:G	rs117346551	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	143021146	143021147	chr6:143021147:G:T	rs9403426	G	T	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	143472012	143472013	chr6:143472013:A:G	rs372411358	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr6	143574093	143574094	chr6:143574094:A:G	rs9321922	A	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	143586061	143586062	chr6:143586062:G:C	rs9390115	G	C	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr6	143609630	143609631	chr6:143609631:T:C	rs10484804	T	C	C	Hoxd3_MA0912.1	15	1	+	8.766456685392553	7.9887521168045454	CTTCTCTAATTACAGT
chr6	143871517	143871518	chr6:143871518:T:G	rs12199553	T	G	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	144109634	144109635	chr6:144109635:C:T	rs62428869	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	144266046	144266047	chr6:144266047:C:T	rs2064196	C	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	144279598	144279599	chr6:144279599:G:T	rs584283	G	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	144413379	144413380	chr6:144413380:G:T	rs141868111	G	T	G	Hoxd3_MA0912.1	6	1	-	7.82053376164736	5.26876864873431	GTGGGTCAATTAAACC
chr6	145408219	145408220	chr6:145408220:T:C	rs9376931	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr6	145730134	145730135	chr6:145730135:T:C	rs9497401	T	C	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr6	145784046	145784047	chr6:145784047:C:T	rs73568185	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr6	145815449	145815450	chr6:145815450:G:A	rs769691940	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr6	145892287	145892288	chr6:145892288:T:C	rs186417130	T	C	T	Hoxd3_MA0912.1	9	1	+	9.093092254612282	2.2045197950469198	TTGAAATAATTATTCC
chr6	146388733	146388734	chr6:146388734:G:A	rs35642670	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr6	146431323	146431324	chr6:146431324:C:A	rs726714	C	A	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr6	146651761	146651762	chr6:146651762:T:C	rs9377014	T	C	C	Hoxd3_MA0912.1	13	1	-	8.855544136626982	7.881702954426274	CTTATCTAATTACATG
chr6	146975257	146975258	chr6:146975258:C:A	rs1112833	C	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	147076507	147076508	chr6:147076508:A:T	rs117615954	A	T	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	147394834	147394835	chr6:147394835:A:G	rs4896909	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	147573262	147573263	chr6:147573263:T:C	rs863623	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr6	147665579	147665580	chr6:147665580:T:C	rs9386189	T	C	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	147850233	147850234	chr6:147850234:C:T	rs75881935	C	T	C	Hoxd3_MA0912.1	3	1	+	9.845780705242474	10.582461927822148	TTGCGTTAATTAAATG
chr6	148274721	148274722	chr6:148274722:T:C	rs6900124	T	C	T	Hoxd3_MA0912.1	1	1	+	9.137404062581965	7.053343575045833	CTAACCTAATTAATCT
chr6	148342761	148342762	chr6:148342762:C:T	rs564063079	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	148561937	148561938	chr6:148561938:T:C	rs208728	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	148628755	148628756	chr6:148628756:A:T	rs75012252	A	T	A	Hoxd3_MA0912.1	7	1	+	9.555110639658606	2.7754273970281793	ATGATCTAATTAAATC
chr6	148678481	148678482	chr6:148678482:C:T	rs7454043	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	148678492	148678493	chr6:148678493:G:A	rs4131488	G	A	G	Hoxd3_MA0912.1	15	1	-	9.01663667470198	9.794341243289988	CCGAATTAATTAATCC
chr6	148678506	148678507	chr6:148678507:G:A	rs4131486	G	A	A	Hoxd3_MA0912.1	1	1	-	9.01663667470198	11.100697162238111	CCGAATTAATTAATCC
chr6	148792009	148792010	chr6:148792010:C:T	rs35751268	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	148852020	148852021	chr6:148852021:G:A	rs17088271	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	148906860	148906861	chr6:148906861:G:A	rs4897069	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr6	148958051	148958052	chr6:148958052:T:C	rs9386240	T	C	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr6	149304475	149304476	chr6:149304476:T:C	rs597144	T	C	T	Hoxd3_MA0912.1	8	1	-	8.82103440688626	1.932461947320899	CTGATCCAATTAAAGC
chr6	149403971	149403972	chr6:149403972:A:G	rs149560682	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	149405927	149405928	chr6:149405928:G:A	rs237019	G	A	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr6	149683642	149683643	chr6:149683643:A:G	rs3798761	A	G	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr6	149891459	149891460	chr6:149891460:G:C	rs7756850	G	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	149913480	149913481	chr6:149913481:A:G	rs190959837	A	G	-	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	150153399	150153400	chr6:150153400:T:C	rs73782218	T	C	T	Hoxd3_MA0912.1	1	1	+	9.425459234068127	7.341398746531997	ATGGGGTAATGAAAGT
chr6	150175681	150175682	chr6:150175682:A:C	rs6918104	A	C	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	150189153	150189154	chr6:150189154:T:G	rs142188036	T	G	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	150263701	150263702	chr6:150263702:A:G	rs80143203	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	150336405	150336406	chr6:150336406:T:C	rs1454738273	T	C	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr6	151058527	151058528	chr6:151058528:A:G	rs9478934	A	G	A	Hoxd3_MA0912.1	9	1	-	7.258903207419847	0.37033074785448417	GTAGGCTAATTGCCGT
chr6	151058533	151058534	chr6:151058534:C:G	rs76387334	C	G	C	Hoxd3_MA0912.1	3	1	-	7.258903207419847	6.071983289746907	GTAGGCTAATTGCCGT
chr6	151179559	151179560	chr6:151179560:T:C	rs7743138	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr6	151396166	151396167	chr6:151396167:A:G	rs7765741	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	151396190	151396191	chr6:151396191:G:C	chr6:151396191:G:C	G	C	G	Hoxd3_MA0912.1	13	1	-	9.279453067416584	7.701375156703502	CTGACTTAATTAACTA
chr6	151451834	151451835	chr6:151451835:G:C	rs28384516	G	C	G	Hoxd3_MA0912.1	14	1	-	7.9475171068760195	7.771101741591572	CTCAATTAATGAACCC
chr6	151451848	151451849	chr6:151451849:G:C	rs868711441	G	C	G	Hoxd3_MA0912.1	0	1	-	7.9475171068760195	5.963140676992909	CTCAATTAATGAACCC
chr6	151589603	151589604	chr6:151589604:A:G	rs138704807	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	152039514	152039515	chr6:152039515:T:C	rs2982720	T	C	t	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	152272258	152272259	chr6:152272259:A:T	rs76541810	A	T	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	152605698	152605699	chr6:152605699:C:T	rs2695252	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	153002179	153002180	chr6:153002180:A:T	rs554930301	A	T	A	Hoxd3_MA0912.1	11	1	+	8.48604813412461	4.14835707303057	CTGAGCTAATGAGCTC
chr6	153977146	153977147	chr6:153977147:G:A	rs73022685	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	154149381	154149382	chr6:154149382:C:T	rs6940181	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	154610682	154610683	chr6:154610683:C:G	rs7750179	C	G	C	Hoxd3_MA0912.1	14	1	-	8.696590193182763	8.873005558467211	TGGACTTAATTACAGT
chr6	154734469	154734470	chr6:154734470:G:A	rs79801576	G	A	G	Hoxd3_MA0912.1	2	1	+	8.076028752948007	6.62619370879097	TTGAGCTAATTGGATG
chr6	155090471	155090472	chr6:155090472:G:A	rs6915661	G	A	G	Hoxd3_MA0912.1	4	1	+	8.34890164733126	7.744664918818886	CTCTGTTAATTGCACT
chr6	155095393	155095394	chr6:155095394:G:A	rs13202771	G	A	A	Hoxd3_MA0912.1	2	1	+	9.745346699844584	8.295511655687545	CCGTGGTAATTAACTT
chr6	155158324	155158325	chr6:155158325:A:G	rs183806086	A	G	A	Hoxd3_MA0912.1	8	1	+	9.166655078437675	2.2780826188723133	CTGAGTTCATTAAATC
chr6	155600729	155600730	chr6:155600730:C:T	rs1498630	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr6	156195199	156195200	chr6:156195200:C:T	rs9480282	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr6	156449930	156449931	chr6:156449931:A:G	rs7756596	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	156782152	156782153	chr6:156782153:T:A	rs73572241	T	A	T	Hoxd3_MA0912.1	6	1	+	10.031023753861325	5.693332692767283	TTGTTGTAATTATACT
chr6	156848336	156848337	chr6:156848337:T:C	rs148439211	T	C	T	Hoxd3_MA0912.1	5	1	-	10.513212297072863	11.237775673866189	TTGTTATAATTACTCT
chr6	157106635	157106636	chr6:157106636:T:C	rs115913463	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr6	157443322	157443323	chr6:157443323:C:T	rs9457470	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	157522167	157522168	chr6:157522168:A:G	rs35773086	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	157535599	157535600	chr6:157535600:A:G	rs34180425	A	G	A	Hoxd3_MA0912.1	12	1	+	7.727014505919259	6.759492274980229	CTGGGCTCATTGATTT
chr6	157535610	157535611	chr6:157535611:C:G	rs16900257	C	G	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	157536582	157536583	chr6:157536583:C:A	rs9457716	C	A	C	Hoxd3_MA0912.1	14	1	+	7.542091641779358	6.4217109467307765	GTGACCTAATTACCCA
chr6	157727603	157727604	chr6:157727604:C:T	rs6921658	C	T	C	Hoxd3_MA0912.1	4	1	+	8.308618696795326	9.282459878996036	CAGACTTCATTAACCT
chr6	157791676	157791677	chr6:157791677:G:A	rs4709592	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr6	157798968	157798969	chr6:157798969:A:G	rs6939670	A	G	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr6	157811500	157811501	chr6:157811501:A:G	rs16900456	A	G	G	Hoxd3_MA0912.1	9	1	-	9.088564223258539	2.1999917636931756	TTGTAGCAATTAGCCT
chr6	157835817	157835818	chr6:157835818:A:G	rs111398590	A	G	A	Hoxd3_MA0912.1	8	1	+	7.934631512686383	1.0460590531210199	GTGAGTCAATTAAACC
chr6	157991531	157991532	chr6:157991532:T:C	rs10455939	T	C	C	Hoxd3_MA0912.1	10	1	+	8.654322870396676	1.8746396277662498	TTTAGTTAATTGCTCC
chr6	158008440	158008441	chr6:158008441:G:C	rs939203050	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr6	158233035	158233036	chr6:158233036:C:T	rs1481795590	C	T	c	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	158655906	158655907	chr6:158655907:A:T	rs111510573	A	T	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr6	159040244	159040245	chr6:159040245:A:G	rs2235820	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	159040249	159040250	chr6:159040250:G:A	rs2073140	G	A	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr6	159224722	159224723	chr6:159224723:C:G	rs432598	C	G	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr6	159389945	159389946	chr6:159389946:A:G	rs62437195	A	G	A	Hoxd3_MA0912.1	3	1	+	9.528139336512835	9.41404158547381	CTGATTCAATTAAATT
chr6	160012401	160012402	chr6:160012402:C:T	rs4709389	C	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr6	160219461	160219462	chr6:160219462:C:T	rs10755577	C	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	160776054	160776055	chr6:160776055:A:G	rs1620921	A	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	160964637	160964638	chr6:160964638:C:T	rs682216	C	T	c	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	161109088	161109089	chr6:161109089:A:C	chr6:161109089:A:C	A	C	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr6	161146300	161146301	chr6:161146301:G:A	rs2277091	G	A	g	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	161228180	161228181	chr6:161228181:A:T	rs11756702	A	T	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr6	161407212	161407213	chr6:161407213:A:T	rs62435932	A	T	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	161407222	161407223	chr6:161407223:G:C	rs115962829	G	C	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr6	161418632	161418633	chr6:161418633:C:G	rs138384525	C	G	C	Hoxd3_MA0912.1	2	1	-	8.52375719779588	6.740282780101934	CCGAGGTAATTGCCTT
chr6	161437978	161437979	chr6:161437979:A:T	rs74923144	A	T	T	Hoxd3_MA0912.1	10	1	-	9.065153462848828	2.285470220218401	CTCATATAATTACTGT
chr6	161496361	161496362	chr6:161496362:G:A	rs6909919	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr6	161713853	161713854	chr6:161713854:T:G	rs60135428	T	G	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr6	161827136	161827137	chr6:161827137:C:T	rs2022991	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr6	161934279	161934280	chr6:161934280:T:C	rs115017968	T	C	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr6	162062518	162062519	chr6:162062519:A:T	rs4582353	A	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr6	162120673	162120674	chr6:162120674:G:T	rs876145	G	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	162157574	162157575	chr6:162157575:C:A	rs2849584	C	A	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr6	162335972	162335973	chr6:162335973:T:C	rs7743791	T	C	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr6	162363998	162363999	chr6:162363999:A:G	rs9365407	A	G	A	Hoxd3_MA0912.1	8	1	+	7.2514241063698	0.36285164680443666	CTGAGCCAATTGCTTC
chr6	162364014	162364015	chr6:162364015:C:T	rs57190343	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr6	162385687	162385688	chr6:162385688:C:T	rs10452577	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	162539000	162539001	chr6:162539001:G:A	rs75117907	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	162810051	162810052	chr6:162810052:T:C	rs9364672	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr6	162964407	162964408	chr6:162964408:T:C	rs62429277	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	163027364	163027365	chr6:163027365:A:G	rs73783975	A	G	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr6	163216409	163216410	chr6:163216410:T:G	rs140397702	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr6	163288350	163288351	chr6:163288351:G:T	rs185262450	G	T	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr6	163296802	163296803	chr6:163296803:G:C	rs9347736	G	C	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	163396824	163396825	chr6:163396825:C:T	chr6:163396825:C:T	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr6	163491883	163491884	chr6:163491884:T:C	rs16895056	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr6	163491888	163491889	chr6:163491889:C:T	rs117951222	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr6	163645682	163645683	chr6:163645683:C:T	rs10945913	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	163657656	163657657	chr6:163657657:T:C	rs10455926	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	163891438	163891439	chr6:163891439:G:A	rs76054172	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr6	163897213	163897214	chr6:163897214:G:A	rs73024916	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	163897244	163897245	chr6:163897245:C:T	rs11752217	C	T	C	Hoxd3_MA0912.1	14	1	+	7.497013657062897	6.932677210930606	CGGTGTTAATGAGCCT
chr6	163960189	163960190	chr6:163960190:T:G	rs75738235	T	G	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	163962812	163962813	chr6:163962813:T:G	rs78545830	T	G	T	Hoxd3_MA0912.1	7	1	-	9.821323689535562	7.8473813233550445	ATGGTGTAATTAAGGT
chr6	164302372	164302373	chr6:164302373:A:G	rs9365680	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr6	164928055	164928056	chr6:164928056:G:A	rs9459254	G	A	G	Hoxd3_MA0912.1	12	1	-	9.626790615958859	8.420038695953995	TTTAGATAATTACCTC
chr6	164998859	164998860	chr6:164998860:G:T	rs35139346	G	T	G	Hoxd3_MA0912.1	14	1	+	7.678173351599787	7.290252270751942	CACCTCTAATTACCGT
chr6	165128574	165128575	chr6:165128575:G:T	rs16897396	G	T	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr6	165130777	165130778	chr6:165130778:T:A	rs2583820	T	A	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr6	165354386	165354387	chr6:165354387:T:C	rs540913	T	C	C	Hoxd3_MA0912.1	8	1	-	7.626452805832381	0.7378803462670178	CTGATGTCATTGGCCT
chr6	165544709	165544710	chr6:165544710:A:G	rs16897974	A	G	A	Hoxd3_MA0912.1	11	1	+	9.912332363925097	8.126406415744103	ATGTGTTAATTAATTC
chr6	166251423	166251424	chr6:166251424:A:C	rs6456065	A	C	A	Hoxd3_MA0912.1	13	1	-	7.9244057095825635	6.950564527381854	TGGTGTCAATTACTGT
chr6	166262939	166262940	chr6:166262940:C:T	rs148773794	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr6	166319241	166319242	chr6:166319242:C:G	chr6:166319242:C:G	C	G	C	Hoxd3_MA0912.1	0	1	+	7.10443103437861	5.1200546044955	CTGCTCCCATTACCCT
chr6	166319263	166319264	chr6:166319264:T:C	rs9355573	T	C	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr6	166492360	166492361	chr6:166492361:A:G	rs3817777	A	G	G	Hoxd3_MA0912.1	2	1	-	8.36305292270022	7.896769074557017	CCTGTTTAATTACACT
chr6	166502623	166502624	chr6:166502624:G:A	rs77311400	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr6	166603358	166603359	chr6:166603359:C:G	rs76633559	C	G	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr6	166717260	166717261	chr6:166717261:A:T	rs4709129	A	T	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr6	166820841	166820842	chr6:166820842:A:T	rs16899540	A	T	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr6	166972857	166972858	chr6:166972858:T:C	rs4710149	T	C	t	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr6	167043996	167043997	chr6:167043997:G:A	rs73033036	G	A	G	Hoxd3_MA0912.1	14	1	+	7.674003537299162	6.730038207535029	ATGAGATCATTAGCGC
chr6	167441714	167441715	chr6:167441715:G:A	rs28702398	G	A	g	Hoxd3_MA0912.1	15	1	-	9.702895307683205	10.480599876271214	CTGTGCTAATTACAAC
chr6	167544271	167544272	chr6:167544272:T:C	rs34886682	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr6	167646287	167646288	chr6:167646288:C:T	rs9718156	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr6	167646292	167646293	chr6:167646293:C:A	rs142531887	C	A	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	167711390	167711391	chr6:167711391:C:G	rs760586	C	G	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr6	167763411	167763412	chr6:167763412:G:T	rs608376	G	T	G	Hoxd3_MA0912.1	6	1	-	8.690742861876394	6.138977748963348	ATGATTCAATTACCTC
chr6	167928379	167928380	chr6:167928380:G:A	rs3778663	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr6	168017945	168017946	chr6:168017946:T:C	rs41266301	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr6	168221171	168221172	chr6:168221172:T:G	rs10945484	T	G	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr6	168359980	168359981	chr6:168359981:G:T	rs76611061	G	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr6	168359986	168359987	chr6:168359987:G:A	rs73036386	G	A	G	Hoxd3_MA0912.1	12	1	-	8.37801139172659	7.171259471721726	TTAAAGTAATTACGGG
chr6	168364271	168364272	chr6:168364272:G:T	rs9355064	G	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr6	168580255	168580256	chr6:168580256:G:A	rs9456215	G	A	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr6	168591219	168591220	chr6:168591220:C:T	rs57442430	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr6	168632359	168632360	chr6:168632360:T:G	rs2342645	T	G	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr6	168943431	168943432	chr6:168943432:T:C	rs9355113	T	C	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr6	168989722	168989723	chr6:168989723:T:C	rs6909842	T	C	T	Hoxd3_MA0912.1	8	1	-	9.077760252612187	2.189187793046825	CTGTGGTAATGACCTC
chr6	169970284	169970285	chr6:169970285:C:T	rs898579105	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr6	169970286	169970287	chr6:169970287:C:T	rs996031824	C	T	c	Hoxd3_MA0912.1	32	0	-	0	0	.
chr6	169970335	169970336	chr6:169970336:C:T	rs956297158	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr6	170154141	170154142	chr6:170154142:G:A	rs28666953	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	55000	55001	chr7:55001:G:A	rs77563689	G	A	N	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	148972	148973	chr7:148973:C:A	rs7779578	C	A	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr7	250252	250253	chr7:250253:G:A	rs148872988	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	292502	292503	chr7:292503:T:G	rs144567362	T	G	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr7	409416	409417	chr7:409417:T:G	rs139340558	T	G	t	Hoxd3_MA0912.1	7	1	-	8.365981797621895	6.3920394314413755	CCCAGATAATTACCCT
chr7	646496	646497	chr7:646497:G:T	rs9691438	G	T	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	665926	665927	chr7:665927:T:A	rs117202823	T	A	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr7	668113	668114	chr7:668114:G:T	rs186655077	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	825764	825765	chr7:825765:C:A	rs4571635	C	A	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr7	843257	843258	chr7:843258:C:G	rs6970511	C	G	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	916702	916703	chr7:916703:A:G	rs10951113	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	1289467	1289468	chr7:1289468:T:A	rs113670422	T	A	T	Hoxd3_MA0912.1	7	1	-	8.158420567901304	1.378737325270879	TAGGGCTAATTAGGCC
chr7	1703580	1703581	chr7:1703581:C:G	rs73040536	C	G	C	Hoxd3_MA0912.1	13	1	+	7.598840183700483	6.020762272987401	AGGAGTTAATTGCCGC
chr7	1854046	1854047	chr7:1854047:G:C	chr7:1854047:G:C	G	C	G	Hoxd3_MA0912.1	13	1	-	7.862280093722122	6.284202183009038	AGCTGGTAATTACCCT
chr7	1854073	1854074	chr7:1854074:C:T	rs112988176	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	2017736	2017737	chr7:2017737:A:G	rs939949	A	G	G	Hoxd3_MA0912.1	1	1	-	10.472101468701519	8.388040981165387	CTGTGGTAATTAGCGC
chr7	2080980	2080981	chr7:2080981:A:G	rs3800880	A	G	g	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	2104809	2104810	chr7:2104810:C:G	rs75415668	C	G	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	2337696	2337697	chr7:2337697:G:A	rs2895183	G	A	A	Hoxd3_MA0912.1	15	1	-	10.823276002731786	11.600980571319795	CTGAGCTAATTAATTC
chr7	2406698	2406699	chr7:2406699:C:T	rs573183017	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	2438637	2438638	chr7:2438638:G:A	rs17132410	G	A	G	Hoxd3_MA0912.1	5	1	+	9.348447178774014	8.623883801980691	TGGACGTAATTAACCT
chr7	2632831	2632832	chr7:2632832:C:T	rs138842767	C	T	.	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	2759549	2759550	chr7:2759550:T:C	rs798492	T	C	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	3273693	3273694	chr7:3273694:A:G	rs17133206	A	G	A	Hoxd3_MA0912.1	15	1	-	7.537112840034574	6.759408271446565	CTGGGCTAATTTCTGT
chr7	3374105	3374106	chr7:3374106:C:T	rs12673513	C	T	C	Hoxd3_MA0912.1	14	1	-	8.95446353265261	8.010498202888478	TTGCTCCAATTACCGT
chr7	3377359	3377360	chr7:3377360:C:T	rs150585543	C	T	c	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	3408948	3408949	chr7:3408949:A:G	rs11972454	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	3697309	3697310	chr7:3697310:G:A	rs1529655	G	A	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	3697774	3697775	chr7:3697775:C:T	rs73302247	C	T	C	Hoxd3_MA0912.1	13	1	+	8.549120712766818	7.944883984254444	ATGTGGTAATGATCCT
chr7	3862223	3862224	chr7:3862224:A:C	rs1380763763	A	C	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	3919787	3919788	chr7:3919788:A:C	rs79403922	A	C	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	4006750	4006751	chr7:4006751:G:A	rs11978290	G	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr7	4006760	4006761	chr7:4006761:G:A	rs10447643	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	4006801	4006802	chr7:4006802:C:G	rs73298917	C	G	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	4033833	4033834	chr7:4033834:C:T	rs28591614	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr7	4269890	4269891	chr7:4269891:A:G	rs6969651	A	G	A	Hoxd3_MA0912.1	10	1	-	7.64512979268234	0.8654465500519117	CCGATTTAATTGGCCT
chr7	4269899	4269900	chr7:4269900:G:A	rs6949021	G	A	A	Hoxd3_MA0912.1	1	1	-	7.64512979268234	9.72919028021847	CCGATTTAATTGGCCT
chr7	4270561	4270562	chr7:4270562:T:C	rs13232073	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	4307591	4307592	chr7:4307592:G:A	rs111983888	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	4405202	4405203	chr7:4405203:G:C	rs13238727	G	C	G	Hoxd3_MA0912.1	2	1	+	8.690742861876394	6.907268444182448	ATGATTCAATTACCTC
chr7	4746536	4746537	chr7:4746537:A:C	rs541328600	A	C	A	Hoxd3_MA0912.1	7	1	+	8.308002233131415	6.334059866950894	TTTTGCTAATTAGCCA
chr7	4814532	4814533	chr7:4814533:G:A	rs143870564	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	5183468	5183469	chr7:5183469:G:A	rs13231863	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	5229792	5229793	chr7:5229793:A:C	rs7785898	A	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr7	5231488	5231489	chr7:5231489:C:T	rs139325045	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	5358948	5358949	chr7:5358949:G:A	rs76531165	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr7	5358957	5358958	chr7:5358958:C:G	rs78386537	C	G	C	Hoxd3_MA0912.1	0	1	+	6.448506445320991	4.464130015437882	CTCAGCCCATTACCCC
chr7	5557685	5557686	chr7:5557686:T:C	rs140137930	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	5597713	5597714	chr7:5597714:A:C	chr7:5597714:A:C	A	C	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	5758996	5758997	chr7:5758997:G:A	rs370661308	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	5872088	5872089	chr7:5872089:T:G	rs566023467	T	G	.	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr7	5872100	5872101	chr7:5872101:G:A	rs118071245	G	A	.	Hoxd3_MA0912.1	4	1	+	6.884801553205139	6.280564824692765	CAGCGGTAATTAGGGG
chr7	6269588	6269589	chr7:6269589:T:G	rs76318475	T	G	T	Hoxd3_MA0912.1	8	1	-	8.46394983379585	3.9732726470288586	TTGAGCTAATTGGAGG
chr7	6709910	6709911	chr7:6709911:G:T	rs118061061	G	T	G	Hoxd3_MA0912.1	5	1	+	10.131558054187286	10.260353162392857	ATGAAGTAATTAATGC
chr7	6821422	6821423	chr7:6821423:A:G	rs7811522	A	G	a	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr7	7107116	7107117	chr7:7107117:A:C	rs60386447	A	C	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	7123021	7123022	chr7:7123022:A:G	rs73674629	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr7	7123057	7123058	chr7:7123058:C:G	rs73333557	C	G	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	7271666	7271667	chr7:7271667:T:C	rs78083823	T	C	C	Hoxd3_MA0912.1	3	1	+	7.9599031584328115	7.223221935853138	CTGTGTTAATGATTCC
chr7	7271694	7271695	chr7:7271695:A:G	rs148366311	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	7364346	7364347	chr7:7364347:A:G	rs6974119	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	7505110	7505111	chr7:7505111:G:A	rs10486175	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	7737239	7737240	chr7:7737240:G:A	rs34627388	G	A	A	Hoxd3_MA0912.1	4	1	+	11.102498757967759	10.498262029455384	GTGAGTTAATTAACCT
chr7	7793480	7793481	chr7:7793481:C:G	rs17137826	C	G	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	7852630	7852631	chr7:7852631:C:T	rs542202245	C	T	c	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	7890068	7890069	chr7:7890069:G:C	rs10232828	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	7967877	7967878	chr7:7967878:T:C	rs37972	T	C	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	8065486	8065487	chr7:8065487:C:G	rs7800533	C	G	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr7	8147428	8147429	chr7:8147429:A:G	rs10156066	A	G	G	Hoxd3_MA0912.1	4	1	+	8.621639659719255	9.22587638823163	CTGTAGTAATTGCTCC
chr7	8175844	8175845	chr7:8175845:A:G	rs3779370	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	8291090	8291091	chr7:8291091:G:A	rs11972640	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr7	8291126	8291127	chr7:8291127:A:G	rs1277883679	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	8291135	8291136	chr7:8291136:C:T	rs188300889	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	8437810	8437811	chr7:8437811:T:C	rs112255776	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	8437811	8437812	chr7:8437812:T:C	rs4141173	T	C	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	8528307	8528308	chr7:8528308:G:C	rs150935093	G	C	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	8811371	8811372	chr7:8811372:A:T	rs1034757	A	T	-	Hoxd3_MA0912.1	12	1	-	8.421963189828212	9.628715109833074	GTGTGGTAATTATTGT
chr7	9036288	9036289	chr7:9036289:A:C	rs245659	A	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	9278235	9278236	chr7:9278236:C:T	rs6948927	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	9539051	9539052	chr7:9539052:A:C	rs111818205	A	C	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	9574930	9574931	chr7:9574931:C:T	rs2938841	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr7	9672685	9672686	chr7:9672686:T:A	rs59459200	T	A	T	Hoxd3_MA0912.1	14	1	-	11.362257764289913	11.918302013206203	CTGAATTAATTAACAT
chr7	10142737	10142738	chr7:10142738:T:C	rs2215607	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr7	10644991	10644992	chr7:10644992:C:T	rs12671684	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	10649023	10649024	chr7:10649024:T:C	rs7811030	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	11485901	11485902	chr7:11485902:T:C	rs17556497	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	11538956	11538957	chr7:11538957:C:T	rs17164737	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	11710019	11710020	chr7:11710020:T:C	rs10225038	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	11717148	11717149	chr7:11717149:A:G	rs1526543	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr7	11895601	11895602	chr7:11895602:G:A	rs10435044	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	11934751	11934752	chr7:11934752:G:A	rs4400275	G	A	A	Hoxd3_MA0912.1	5	1	+	8.707789058769379	7.983225681976055	TTGAAGTAATGACTAT
chr7	12211079	12211080	chr7:12211080:T:C	rs533164499	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr7	12211118	12211119	chr7:12211119:G:C	rs781037445	G	C	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr7	12211121	12211122	chr7:12211122:C:T	rs73299037	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	12295030	12295031	chr7:12295031:T:A	rs4721078	T	A	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr7	12295077	12295078	chr7:12295078:G:A	rs1286437372	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	12458840	12458841	chr7:12458841:T:G	rs187294837	T	G	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr7	12507331	12507332	chr7:12507332:A:G	rs7787895	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	12518349	12518350	chr7:12518350:A:G	rs1440029	A	G	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr7	12653514	12653515	chr7:12653515:A:G	rs2033604	A	G	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	12866171	12866172	chr7:12866172:G:A	rs2357049	G	A	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr7	12942853	12942854	chr7:12942854:G:A	rs246828	G	A	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	13240586	13240587	chr7:13240587:G:A	rs35500566	G	A	G	Hoxd3_MA0912.1	15	1	-	7.300126501647195	8.077831070235202	CTGAGGTCATTGCCAC
chr7	13240600	13240601	chr7:13240601:A:G	rs116671719	A	G	A	Hoxd3_MA0912.1	1	1	-	7.300126501647195	5.216066014111065	CTGAGGTCATTGCCAC
chr7	13240896	13240897	chr7:13240897:C:T	rs62447875	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	13539745	13539746	chr7:13539746:C:T	rs9638696	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	13681405	13681406	chr7:13681406:G:A	rs68135210	G	A	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr7	13728258	13728259	chr7:13728259:A:G	rs17167460	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr7	13850780	13850781	chr7:13850781:C:T	rs17167582	C	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	13904153	13904154	chr7:13904154:G:T	rs79525187	G	T	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	14023935	14023936	chr7:14023936:A:G	rs62452789	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr7	14313259	14313260	chr7:14313260:C:G	rs6461083	C	G	-	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	14605976	14605977	chr7:14605977:A:G	rs62445594	A	G	A	Hoxd3_MA0912.1	9	1	-	7.87311632194757	0.984543862382208	CTCTGCTAATTACAAG
chr7	15054280	15054281	chr7:15054281:C:G	rs73066743	C	G	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	15130886	15130887	chr7:15130887:A:G	rs6977242	A	G	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr7	15198488	15198489	chr7:15198489:C:T	rs113392164	C	T	C	Hoxd3_MA0912.1	7	1	+	7.160634905127541	2.3548940286776316	ATGGGTTCATTGCCTG
chr7	15683210	15683211	chr7:15683211:G:A	rs3801430	G	A	G	Hoxd3_MA0912.1	13	1	-	8.800999445094298	8.196762716581926	TAATTCTAATTACCGT
chr7	15837033	15837034	chr7:15837034:C:T	rs71540723	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	15853741	15853742	chr7:15853742:G:A	rs38170	G	A	A	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	15863045	15863046	chr7:15863046:T:A	rs38183	T	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	16348669	16348670	chr7:16348670:T:C	rs12666868	T	C	T	Hoxd3_MA0912.1	1	1	+	8.419474771334746	6.3354142837986185	ATTGGTTAATTAGTGG
chr7	16679447	16679448	chr7:16679448:T:C	rs10238254	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	17409238	17409239	chr7:17409239:T:C	rs78503161	T	C	T	Hoxd3_MA0912.1	9	1	+	9.651244472852198	2.762672013286838	TTGAACTAATTGCTGT
chr7	17409264	17409265	chr7:17409265:A:G	rs73303627	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	17608381	17608382	chr7:17608382:C:T	rs4721636	C	T	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr7	18257815	18257816	chr7:18257816:T:C	rs17138874	T	C	T	Hoxd3_MA0912.1	5	1	+	8.405776047775205	8.088454605888797	TTGGGTTAATTGCATA
chr7	18346114	18346115	chr7:18346115:G:A	rs644570	G	A	A	Hoxd3_MA0912.1	14	1	+	9.975386348291668	9.031421018527535	TTGGTTTAATTACAGA
chr7	18503626	18503627	chr7:18503627:A:G	rs3807925	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	18846553	18846554	chr7:18846554:G:A	rs17140133	G	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	19119955	19119956	chr7:19119956:A:G	rs575592912	A	G	a	Hoxd3_MA0912.1	1	1	+	7.011273753735875	6.153449480361682	CAGGGGTCATTAGCCA
chr7	19538006	19538007	chr7:19538007:G:C	rs2024356	G	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	19900060	19900061	chr7:19900061:C:G	rs76952582	C	G	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	19900080	19900081	chr7:19900081:T:A	rs4994102	T	A	A	Hoxd3_MA0912.1	6	1	+	8.935141446001998	4.597450384907958	TTGGGGTCATTATTGT
chr7	19945013	19945014	chr7:19945014:T:C	rs13221319	T	C	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	20187981	20187982	chr7:20187982:G:A	rs28669966	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	20216725	20216726	chr7:20216726:A:C	rs3095007	A	C	C	Hoxd3_MA0912.1	11	1	+	8.281156480412927	1.5365203110005974	CTAATTTAATGACCCC
chr7	20484304	20484305	chr7:20484305:A:G	rs6958594	A	G	G	Hoxd3_MA0912.1	10	1	-	9.983403496782445	3.2037202541520187	TTGTTTTAATTATTGT
chr7	20484305	20484306	chr7:20484306:A:C	rs6958595	A	C	C	Hoxd3_MA0912.1	9	1	-	9.983403496782445	5.492726310015454	TTGTTTTAATTATTGT
chr7	20650956	20650957	chr7:20650957:C:T	rs76160218	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	20794790	20794791	chr7:20794791:C:T	rs73087577	C	T	C	Hoxd3_MA0912.1	0	1	+	9.7054464174645	9.757951914842431	CCGTGGTAATTAAACT
chr7	21043284	21043285	chr7:21043285:G:C	rs6461532	G	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr7	21254985	21254986	chr7:21254986:T:G	rs17144142	T	G	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr7	21638354	21638355	chr7:21638355:C:T	rs17144830	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	21718930	21718931	chr7:21718931:C:T	rs6461596	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	21828897	21828898	chr7:21828898:G:A	rs78172873	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr7	21851347	21851348	chr7:21851348:T:G	rs112823364	T	G	T	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr7	22074936	22074937	chr7:22074937:A:G	rs113346966	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	22114964	22114965	chr7:22114965:A:G	rs11768715	A	G	A	Hoxd3_MA0912.1	10	1	-	8.80298539770645	2.0233021550760233	CAGAACTAATTAGTTT
chr7	22185789	22185790	chr7:22185790:G:C	rs80031343	G	C	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	22332405	22332406	chr7:22332406:A:G	rs62447101	A	G	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	22454331	22454332	chr7:22454332:G:C	rs12536301	G	C	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr7	22457425	22457426	chr7:22457426:G:A	rs73083167	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr7	22729087	22729088	chr7:22729088:T:G	rs1554606	T	G	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	22751518	22751519	chr7:22751519:C:T	rs11981240	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	22849565	22849566	chr7:22849566:C:T	rs60174404	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	22859156	22859157	chr7:22859157:G:A	rs539334607	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	22865035	22865036	chr7:22865036:A:G	rs1469423213	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr7	22974790	22974791	chr7:22974791:C:T	rs13237510	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr7	22974827	22974828	chr7:22974828:G:C	rs73082395	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr7	22990545	22990546	chr7:22990546:C:T	rs2053197	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	23096690	23096691	chr7:23096691:C:T	rs6967419	C	T	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	23239148	23239149	chr7:23239149:G:A	rs6977928	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr7	23680644	23680645	chr7:23680645:G:C	rs79480722	G	C	G	Hoxd3_MA0912.1	12	1	-	8.170715595908206	7.203193364969177	TTGACTCAATTACTGG
chr7	24038742	24038743	chr7:24038743:A:G	rs4722322	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr7	24200239	24200240	chr7:24200240:G:A	rs190059880	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	24367467	24367468	chr7:24367468:C:T	rs55710676	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	24926111	24926112	chr7:24926112:A:G	rs137	A	G	A	Hoxd3_MA0912.1	2	1	+	7.501716662374534	8.951551706531573	CTAGAACAATTACCCC
chr7	25075623	25075624	chr7:25075624:T:C	rs39434	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	25217084	25217085	chr7:25217085:C:T	rs6955506	C	T	T	Hoxd3_MA0912.1	12	1	+	8.640156092458694	7.43340417245383	TGTAGCTAATTACTGT
chr7	25291317	25291318	chr7:25291318:C:A	rs11762160	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	25353427	25353428	chr7:25353428:C:T	rs11764103	C	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	25356634	25356635	chr7:25356635:G:A	rs10253546	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr7	25375446	25375447	chr7:25375447:A:T	rs2188993	A	T	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	25375859	25375860	chr7:25375860:T:C	rs4722462	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr7	25376485	25376486	chr7:25376486:C:T	rs12700627	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	25566247	25566248	chr7:25566248:A:G	rs73084000	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	25670414	25670415	chr7:25670415:G:A	rs117990749	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	25670441	25670442	chr7:25670442:T:G	rs916720467	T	G	T	Hoxd3_MA0912.1	10	1	+	7.477826754531627	5.503884388351109	CTGAGCTCATTGGCTT
chr7	25834610	25834611	chr7:25834611:T:A	rs75166914	T	A	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	25845790	25845791	chr7:25845791:C:T	rs6461887	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	25861545	25861546	chr7:25861546:T:C	rs528397717	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr7	26101947	26101948	chr7:26101948:C:T	rs916966	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	26149738	26149739	chr7:26149739:G:A	rs184455167	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	26656260	26656261	chr7:26656261:C:G	rs6978504	C	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	26659441	26659442	chr7:26659442:A:G	rs11971098	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	27211037	27211038	chr7:27211038:T:C	rs191119952	T	C	T	Hoxd3_MA0912.1	1	1	+	7.308791616099823	5.2247311285636915	GTGGGCTAATGACCTG
chr7	27549329	27549330	chr7:27549330:C:T	rs7795207	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	27652808	27652809	chr7:27652809:T:G	rs6963421	T	G	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr7	27663912	27663913	chr7:27663913:T:C	rs1053075098	T	C	T	Hoxd3_MA0912.1	9	1	+	7.4218401598405634	0.533267700275201	TGGGGGTAATTGCAGG
chr7	27706777	27706778	chr7:27706778:T:G	rs6978998	T	G	G	Hoxd3_MA0912.1	11	1	-	8.647917404402959	1.9032812349906294	AAGAGTTAATTATCTC
chr7	27748083	27748084	chr7:27748084:T:A	rs10229483	T	A	A	Hoxd3_MA0912.1	14	1	-	9.402542159021463	9.958586407937753	ATGGGTCAATTAACAT
chr7	27910645	27910646	chr7:27910646:T:C	rs73685856	T	C	T	Hoxd3_MA0912.1	6	1	+	9.28405939092996	7.498133442748967	TTAGTGTAATTAAAGC
chr7	28062361	28062362	chr7:28062362:T:G	rs536136584	T	G	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	28105411	28105412	chr7:28105412:T:C	rs1109483	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	28200790	28200791	chr7:28200791:T:C	rs180774964	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	28382422	28382423	chr7:28382423:T:A	rs887621	T	A	T	Hoxd3_MA0912.1	7	1	-	9.423137639487221	2.6434543968567934	TTGCATTAATTATTCT
chr7	28408828	28408829	chr7:28408829:T:C	rs42711	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	28445031	28445032	chr7:28445032:G:A	rs4722797	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr7	28445032	28445033	chr7:28445033:G:T	rs73075810	G	T	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	28478672	28478673	chr7:28478673:T:C	rs73684380	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	28624164	28624165	chr7:28624165:A:G	rs114105762	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr7	28674809	28674810	chr7:28674810:T:C	rs41344	T	C	T	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr7	28748016	28748017	chr7:28748017:C:T	rs184516539	C	T	C	Hoxd3_MA0912.1	13	1	+	7.810257543003946	7.206020814491572	CAGGGTCAATGAACGT
chr7	28853193	28853194	chr7:28853194:T:C	rs62442223	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	28867346	28867347	chr7:28867347:T:C	rs10257959	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	29007635	29007636	chr7:29007636:A:C	chr7:29007636:A:C	A	C	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	29040253	29040254	chr7:29040254:C:T	rs4141275	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr7	29091877	29091878	chr7:29091878:A:G	rs2192508	A	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	29215991	29215992	chr7:29215992:C:A	rs39060	C	A	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr7	29317116	29317117	chr7:29317117:C:T	rs17686943	C	T	C	Hoxd3_MA0912.1	15	1	-	7.6361774308848	6.795178803925584	CTGTGCTCATTATCTG
chr7	29329210	29329211	chr7:29329211:C:G	rs761101410	C	G	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr7	29978488	29978489	chr7:29978489:G:A	rs34293043	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr7	29978489	29978490	chr7:29978490:C:A	chr7:29978490:C:A	C	A	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr7	30168857	30168858	chr7:30168858:G:A	rs77270172	G	A	G	Hoxd3_MA0912.1	13	1	-	8.36110126112193	7.756864532609557	ATGAGTTCATTAGCAT
chr7	30382779	30382780	chr7:30382780:G:A	rs7776608	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	30550124	30550125	chr7:30550125:G:T	rs538291082	G	T	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr7	30550140	30550141	chr7:30550141:G:A	rs966569622	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	30830897	30830898	chr7:30830898:T:C	rs882534	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	30830911	30830912	chr7:30830912:G:A	rs882533	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	31126069	31126070	chr7:31126070:C:T	rs10282360	C	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr7	31527238	31527239	chr7:31527239:A:C	rs12701109	A	C	A	Hoxd3_MA0912.1	13	1	+	9.242230754887224	9.846467483399598	CAAAGTTAATTACATT
chr7	31850513	31850514	chr7:31850514:G:T	rs2072431	G	T	G	Hoxd3_MA0912.1	14	1	-	7.869411659978086	6.749030964929505	CTGAAACAATGAACCT
chr7	32290164	32290165	chr7:32290165:G:A	rs144718293	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	32471246	32471247	chr7:32471247:C:T	rs10232444	C	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	32532858	32532859	chr7:32532859:A:T	rs180813934	A	T	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	32727195	32727196	chr7:32727196:C:T	rs35486151	C	T	c	Hoxd3_MA0912.1	2	1	-	6.608108299941482	5.158273255784443	CTGACGTCATGACCCG
chr7	32785019	32785020	chr7:32785020:C:T	rs10951356	C	T	C	Hoxd3_MA0912.1	13	1	+	8.607581058236184	8.00334432972381	ATGAGTTAATGAACGA
chr7	33062987	33062988	chr7:33062988:G:C	rs989793327	G	C	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr7	33076433	33076434	chr7:33076434:A:G	rs10244526	A	G	G	Hoxd3_MA0912.1	15	1	-	8.90613985086327	8.12843528227526	CAGATTTAATTGACTT
chr7	33186074	33186075	chr7:33186075:A:C	rs11979709	A	C	A	Hoxd3_MA0912.1	1	1	-	9.676597945445323	7.5925374579091915	CTGTTATAATTAACTG
chr7	33580263	33580264	chr7:33580264:A:G	rs896194	A	G	G	Hoxd3_MA0912.1	9	1	-	7.2073916484952285	0.31881918892986655	CCGGGCTAATTGAGCT
chr7	33640940	33640941	chr7:33640941:G:A	rs139006892	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr7	33721164	33721165	chr7:33721165:G:T	rs79456863	G	T	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	34063940	34063941	chr7:34063941:C:A	rs1420328	C	A	A	Hoxd3_MA0912.1	4	1	-	8.186142539851435	7.581905811339061	CAGAGGTAATGAGTCT
chr7	34128415	34128416	chr7:34128416:G:A	rs6462533	G	A	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr7	34212384	34212385	chr7:34212385:G:A	rs75125527	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	34665388	34665389	chr7:34665389:A:G	rs2530567	A	G	G	Hoxd3_MA0912.1	1	1	-	11.064307833790554	8.980247346254423	TTGAGGTAATTAATTC
chr7	34721457	34721458	chr7:34721458:T:C	rs10225759	T	C	T	Hoxd3_MA0912.1	11	1	-	8.788773487364772	7.0028475391837794	TCGTTCTAATTACTGT
chr7	34831715	34831716	chr7:34831716:A:G	rs17789834	A	G	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	34939469	34939470	chr7:34939470:C:T	rs3735410	C	T	.	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	35256168	35256169	chr7:35256169:A:C	rs28561590	A	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	35286505	35286506	chr7:35286506:T:C	rs1448726323	T	C	T	Hoxd3_MA0912.1	15	1	+	8.338147038608335	7.560442470020327	CTTAGATAATGACACT
chr7	35333606	35333607	chr7:35333607:T:A	rs235396	T	A	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	35356347	35356348	chr7:35356348:C:A	rs59332197	C	A	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr7	35572703	35572704	chr7:35572704:T:G	rs73086839	T	G	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	36214886	36214887	chr7:36214887:A:C	rs377686324	A	C	A	Hoxd3_MA0912.1	7	1	+	8.942998761935028	6.96905639575451	CTGGTATAATTAGAGG
chr7	36450988	36450989	chr7:36450989:G:T	rs3801303	G	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr7	36650968	36650969	chr7:36650969:A:G	rs4620191	A	G	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	36726870	36726871	chr7:36726871:T:G	rs73346035	T	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr7	36916936	36916937	chr7:36916937:G:A	rs17170782	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	37008934	37008935	chr7:37008935:C:T	rs73117554	C	T	C	Hoxd3_MA0912.1	14	1	+	11.214473096265314	10.650136650133023	ATGATTTAATTAATCT
chr7	37320604	37320605	chr7:37320605:T:G	rs6947058	T	G	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr7	37410136	37410137	chr7:37410137:G:A	rs11768985	G	A	A	Hoxd3_MA0912.1	11	1	+	8.662663005727591	10.448588953908585	CTGCTGTAATTGCTCT
chr7	37540878	37540879	chr7:37540879:C:T	rs73337690	C	T	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr7	37729616	37729617	chr7:37729617:T:A	rs2709101	T	A	A	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr7	37945677	37945678	chr7:37945678:C:T	rs10085558	C	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr7	37987684	37987685	chr7:37987685:G:T	rs17171245	G	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	38334559	38334560	chr7:38334560:A:T	rs719290	A	T	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	38398771	38398772	chr7:38398772:A:G	rs77939428	A	G	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	38630251	38630252	chr7:38630252:A:G	rs80079671	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr7	39054327	39054328	chr7:39054328:C:T	rs7786896	C	T	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr7	39054354	39054355	chr7:39054355:T:A	rs12531789	T	A	T	Hoxd3_MA0912.1	8	1	-	7.702011024415814	3.211333837648823	TAGGAGCAATTACGCT
chr7	39250727	39250728	chr7:39250728:G:A	rs4446648	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	39520005	39520006	chr7:39520006:A:C	chr7:39520006:A:C	A	C	A	Hoxd3_MA0912.1	15	1	-	7.8280203001411355	7.004011163511441	CTGGTTTAATGGCTGT
chr7	39566402	39566403	chr7:39566403:C:G	rs372274583	C	G	C	Hoxd3_MA0912.1	13	1	-	6.5095912313009485	8.08766914201403	CCGAGGCAATTACGGG
chr7	39889064	39889065	chr7:39889065:C:T	rs142144627	C	T	c	Hoxd3_MA0912.1	12	1	+	8.98519278012561	7.778440860120746	CAGATGTAATTACGTT
chr7	40403652	40403653	chr7:40403653:C:T	rs9690724	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	40986000	40986001	chr7:40986001:G:C	rs6967858	G	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	41351080	41351081	chr7:41351081:C:A	rs10279659	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	42021986	42021987	chr7:42021987:G:A	rs112374038	G	A	G	Hoxd3_MA0912.1	13	1	-	7.572513597491826	6.968276868979451	CTGACTTAATGGCCGT
chr7	42097263	42097264	chr7:42097264:A:T	chr7:42097264:A:T	A	T	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	42106770	42106771	chr7:42106771:G:A	rs2141175	G	A	A	Hoxd3_MA0912.1	12	1	-	7.958502621191858	6.751750701186994	CTGCTGTCATTACCAT
chr7	42150723	42150724	chr7:42150724:G:T	rs78776791	G	T	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	42228104	42228105	chr7:42228105:C:T	rs62443824	C	T	C	Hoxd3_MA0912.1	13	1	+	7.046511907895044	6.442275179382671	GTGGGTTCATTAGCGG
chr7	42228114	42228115	chr7:42228115:G:A	rs12701951	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr7	42263059	42263060	chr7:42263060:A:T	rs183293770	A	T	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr7	42394807	42394808	chr7:42394808:C:T	rs725875	C	T	c	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	42459543	42459544	chr7:42459544:G:A	rs57356289	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	42868592	42868593	chr7:42868593:C:G	rs60327537	C	G	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	42967954	42967955	chr7:42967955:C:T	rs59294293	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr7	43147798	43147799	chr7:43147799:G:A	rs6977397	G	A	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr7	43161467	43161468	chr7:43161468:C:G	rs7790085	C	G	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr7	43449060	43449061	chr7:43449061:G:A	rs7783180	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	43534621	43534622	chr7:43534622:G:C	rs73100755	G	C	g	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	43615574	43615575	chr7:43615575:C:T	rs118149113	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	43615611	43615612	chr7:43615612:C:T	rs10215478	C	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr7	43762383	43762384	chr7:43762384:A:G	rs10486752	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	43839137	43839138	chr7:43839138:C:T	rs600380	C	T	T	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	44042029	44042030	chr7:44042030:C:T	rs117892540	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr7	44881787	44881788	chr7:44881788:C:A	rs112908972	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	45097117	45097118	chr7:45097118:C:T	rs62457081	C	T	C	Hoxd3_MA0912.1	14	1	+	6.419581966260645	5.855245520128355	CTGACCTCATGACCCG
chr7	45136383	45136384	chr7:45136384:A:G	rs112723226	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	45211760	45211761	chr7:45211761:C:T	rs34345812	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr7	45211771	45211772	chr7:45211772:A:T	rs16880990	A	T	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	45223692	45223693	chr7:45223693:T:G	rs180902774	T	G	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr7	45395038	45395039	chr7:45395039:A:G	rs28534369	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	45708333	45708334	chr7:45708334:A:G	rs2280497	A	G	G	Hoxd3_MA0912.1	1	1	-	8.259833584632275	6.175773097096147	ATGGGGTCATTACATC
chr7	46013997	46013998	chr7:46013998:G:A	rs2965079	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr7	46742171	46742172	chr7:46742172:T:A	rs34299183	T	A	T	Hoxd3_MA0912.1	7	1	-	10.050566369209763	3.2708831265793346	TTGAAGTAATTAAGCC
chr7	46764391	46764392	chr7:46764392:G:A	rs190908184	G	A	G	Hoxd3_MA0912.1	12	1	+	8.715480000167895	9.683002231106926	CTGTAATAATTAGTCC
chr7	47357112	47357113	chr7:47357113:T:C	rs56048701	T	C	T	Hoxd3_MA0912.1	15	1	+	9.937182809094653	9.159478240506644	ATTAATTAATTAACTT
chr7	47501378	47501379	chr7:47501379:C:T	rs78616221	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	47588899	47588900	chr7:47588900:G:T	rs17710080	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr7	47600400	47600401	chr7:47600401:T:C	rs10224591	T	C	C	Hoxd3_MA0912.1	1	1	+	8.273220922639021	6.18916043510289	CTGGTGTAATGACATG
chr7	47600412	47600413	chr7:47600413:A:G	rs113818279	A	G	A	Hoxd3_MA0912.1	13	1	+	8.273220922639021	7.2993797404383125	CTGGTGTAATGACATG
chr7	47600414	47600415	chr7:47600415:G:A	rs115570666	G	A	G	Hoxd3_MA0912.1	15	1	+	8.273220922639021	7.432222295679805	CTGGTGTAATGACATG
chr7	47688933	47688934	chr7:47688934:G:A	rs11770388	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	47759393	47759394	chr7:47759394:G:C	rs17627595	G	C	G	Hoxd3_MA0912.1	3	1	+	8.30336101665179	7.116441098978848	ACTGGTTAATTACTCT
chr7	48232918	48232919	chr7:48232919:C:T	rs10271079	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	48373197	48373198	chr7:48373198:A:G	rs17548650	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	48409058	48409059	chr7:48409059:T:A	rs76113214	T	A	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	48548313	48548314	chr7:48548314:C:A	rs1534393	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	49106420	49106421	chr7:49106421:G:A	rs10281127	G	A	A	Hoxd3_MA0912.1	14	1	+	7.613809412880055	6.669844083115921	CCTACCTAATTACCGT
chr7	49527562	49527563	chr7:49527563:T:G	rs56013638	T	G	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr7	50349039	50349040	chr7:50349040:C:G	rs75076973	C	G	c	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	50480939	50480940	chr7:50480940:G:A	rs11575444	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	50480952	50480953	chr7:50480953:C:T	rs4948196	C	T	c	Hoxd3_MA0912.1	14	1	-	7.755331061728588	6.811365731964454	CAATGGCAATTACCGT
chr7	50500344	50500345	chr7:50500345:G:A	rs73119290	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	50529928	50529929	chr7:50529929:A:G	rs1982406	A	G	A	Hoxd3_MA0912.1	5	1	-	8.845292078169885	8.527970636283477	TTCTTTTAATTACCTC
chr7	51132710	51132711	chr7:51132711:G:A	rs727218	G	A	A	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	51289728	51289729	chr7:51289729:C:T	rs114007174	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	51361101	51361102	chr7:51361102:T:C	rs59312832	T	C	t	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	51540002	51540003	chr7:51540003:C:T	rs116608584	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	51614338	51614339	chr7:51614339:T:C	rs2041333	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	51957079	51957080	chr7:51957080:G:A	rs1031910	G	A	G	Hoxd3_MA0912.1	15	1	-	8.93311115400904	9.710815722597049	AAGATCTAATTACCTC
chr7	52547603	52547604	chr7:52547604:A:G	rs10258765	A	G	A	Hoxd3_MA0912.1	11	1	+	8.374856073848747	6.588930125667753	TGTGGGTAATTAACAT
chr7	52960741	52960742	chr7:52960742:C:T	rs35313212	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	53146509	53146510	chr7:53146510:T:C	rs1525574	T	C	N	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	53174639	53174640	chr7:53174640:T:A	rs73364095	T	A	t	Hoxd3_MA0912.1	18	0	-	0	0	.
chr7	53174670	53174671	chr7:53174671:T:C	rs12533662	T	C	t	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	53504887	53504888	chr7:53504888:A:G	rs4947811	A	G	a	Hoxd3_MA0912.1	35	0	-	0	0	.
chr7	54249869	54249870	chr7:54249870:A:G	rs10273428	A	G	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	55208586	55208587	chr7:55208587:G:A	rs884419	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr7	55309330	55309331	chr7:55309331:C:T	rs867561	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	55571298	55571299	chr7:55571299:T:C	chr7:55571299:T:C	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	55710722	55710723	chr7:55710723:T:C	rs4397354	T	C	T	Hoxd3_MA0912.1	6	1	+	9.8351240944198	8.049198146238808	TAGTTGTAATTAATGT
chr7	55734159	55734160	chr7:55734160:C:A	rs5023487	C	A	.	Hoxd3_MA0912.1	2	1	-	8.690742861876394	7.373552292325651	ATGATTCAATTACCTC
chr7	55887537	55887538	chr7:55887538:G:C	rs559529782	G	C	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	55887565	55887566	chr7:55887566:G:C	rs572289985	G	C	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	56270925	56270926	chr7:56270926:C:T	rs11771650	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	56352961	56352962	chr7:56352962:G:A	rs4948133	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	56537153	56537154	chr7:56537154:G:A	rs7782035	G	A	G	Hoxd3_MA0912.1	13	1	+	8.64942294604099	9.623264128241699	CTGCATTAATTACGGC
chr7	56537156	56537157	chr7:56537157:C:T	rs7783143	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr7	57505225	57505226	chr7:57505226:G:A	rs10081282	G	A	.	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	63012911	63012912	chr7:63012912:G:A	rs73363025	G	A	g	Hoxd3_MA0912.1	23	0	+	0	0	.
chr7	64315204	64315205	chr7:64315205:G:A	rs62463887	G	A	G	Hoxd3_MA0912.1	4	1	+	8.937757866122277	8.333521137609903	ATGAGCCAATTAATCC
chr7	65825627	65825628	chr7:65825628:C:T	rs11767457	C	T	.	Hoxd3_MA0912.1	12	1	+	8.274148526135264	7.0673966061304	TGGGGGTCATTACCTT
chr7	66238147	66238148	chr7:66238148:G:T	rs116063187	G	T	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr7	66253729	66253730	chr7:66253730:G:A	rs6964245	G	A	A	Hoxd3_MA0912.1	3	1	-	9.328208258860004	10.064889481439677	CTGCAGTAATTAAAAT
chr7	66307806	66307807	chr7:66307807:C:T	rs144288104	C	T	c	Hoxd3_MA0912.1	13	1	+	8.087468209763836	7.483231481251462	CTTTGTTCATTAGCGT
chr7	66653260	66653261	chr7:66653261:G:C	rs10233806	G	C	G	Hoxd3_MA0912.1	0	1	-	8.727154876404104	6.742778446520996	CTTTGCTAATTATCGC
chr7	66685348	66685349	chr7:66685349:C:T	rs76003468	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	67129433	67129434	chr7:67129434:A:G	rs143364770	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	67129472	67129473	chr7:67129473:G:A	rs11766841	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	67209403	67209404	chr7:67209404:G:C	rs6460333	G	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	67268042	67268043	chr7:67268043:G:A	rs11769282	G	A	.	Hoxd3_MA0912.1	18	0	-	0	0	.
chr7	67709596	67709597	chr7:67709597:T:C	rs2530447	T	C	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr7	67739163	67739164	chr7:67739164:A:G	rs9647899	A	G	G	Hoxd3_MA0912.1	3	1	+	9.259520289903822	9.1454225388648	CTGAGGTAATGAAAAT
chr7	67765676	67765677	chr7:67765677:G:A	rs73139457	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	68093443	68093444	chr7:68093444:G:A	rs140691339	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	68412244	68412245	chr7:68412245:T:C	rs10263947	T	C	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	68476273	68476274	chr7:68476274:C:G	rs116406506	C	G	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	68755814	68755815	chr7:68755815:G:A	rs2711504	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	68757414	68757415	chr7:68757415:G:C	rs2079371	G	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	68889197	68889198	chr7:68889198:A:G	rs16868925	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	68945587	68945588	chr7:68945588:A:G	rs6958885	A	G	A	Hoxd3_MA0912.1	9	1	-	9.029739774618928	2.1411673150535675	CTGTGGTAATTGAGCT
chr7	68945590	68945591	chr7:68945591:A:T	rs6958887	A	T	A	Hoxd3_MA0912.1	6	1	-	9.029739774618928	4.692048713524889	CTGTGGTAATTGAGCT
chr7	69116183	69116184	chr7:69116184:A:G	rs79512900	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	69439027	69439028	chr7:69439028:T:A	rs996255768	T	A	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	69501790	69501791	chr7:69501791:T:C	rs9791418	T	C	T	Hoxd3_MA0912.1	9	1	+	8.53428313072298	1.6457106711576162	ATGAGGCAATGAACCT
chr7	69777038	69777039	chr7:69777039:A:T	rs116634979	A	T	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	70113757	70113758	chr7:70113758:C:G	rs10228786	C	G	C	Hoxd3_MA0912.1	12	1	+	8.348728410457763	7.381206179518734	ATGGATTAATGACACC
chr7	70705017	70705018	chr7:70705018:T:C	rs4466287	T	C	C	Hoxd3_MA0912.1	3	1	-	8.885785134435901	8.771687383396877	CTTAGCTAATTGATGT
chr7	70977261	70977262	chr7:70977262:C:T	rs117664518	C	T	c	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	71222552	71222553	chr7:71222553:A:G	rs34701545	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	71382567	71382568	chr7:71382568:C:T	rs4719119	C	T	T	Hoxd3_MA0912.1	0	1	+	9.843354026158606	9.895859523536535	CTGAGATAATTGCACT
chr7	71453543	71453544	chr7:71453544:T:C	rs79621326	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	71461938	71461939	chr7:71461939:C:T	rs113560342	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	71630062	71630063	chr7:71630063:C:T	rs67899549	C	T	-	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	72444350	72444351	chr7:72444351:A:G	rs10434961	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	72490820	72490821	chr7:72490821:G:T	rs73133177	G	T	g	Hoxd3_MA0912.1	2	1	+	9.078663942724237	7.761473373173494	ATGAGTCAATTAAAGC
chr7	74060036	74060037	chr7:74060037:T:A	rs61734584	T	A	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	74462881	74462882	chr7:74462882:C:T	rs563653254	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	74478894	74478895	chr7:74478895:G:T	rs1468418	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	75010695	75010696	chr7:75010696:C:T	rs3864390	C	T	C	Hoxd3_MA0912.1	3	1	-	8.367208054595478	8.481305805634502	CTGGGCTAATTGAAAC
chr7	75666893	75666894	chr7:75666894:C:G	rs1015877	C	G	g	Hoxd3_MA0912.1	34	0	+	0	0	.
chr7	75734930	75734931	chr7:75734931:C:T	rs772581171	C	T	c	Hoxd3_MA0912.1	2	1	-	8.670101858614652	7.220266814457613	ATGGGATAATTACCAA
chr7	76187352	76187353	chr7:76187353:T:C	rs10235674	T	C	.	Hoxd3_MA0912.1	10	1	+	9.452279036393456	2.672595793763029	CTGTGGTCATTAGCCT
chr7	76683163	76683164	chr7:76683164:A:G	rs117905902	A	G	.	Hoxd3_MA0912.1	3	1	+	8.522557292459348	8.408459541420324	TAGAGTCAATTAAAGG
chr7	77332416	77332417	chr7:77332417:T:A	rs11761838	T	A	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	77430298	77430299	chr7:77430299:T:C	rs12704962	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr7	77477312	77477313	chr7:77477313:A:G	rs10224036	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr7	77662304	77662305	chr7:77662305:G:A	rs4604352	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	77662323	77662324	chr7:77662324:A:G	rs4299927	A	G	G	Hoxd3_MA0912.1	8	1	+	7.186772412436299	0.298199952870937	CTGACCTCATTATCCG
chr7	77746207	77746208	chr7:77746208:T:G	rs6465793	T	G	T	Hoxd3_MA0912.1	8	1	-	8.937757866122277	4.4470806793552855	ATGAGCCAATTAAACC
chr7	77812274	77812275	chr7:77812275:G:A	rs563637245	G	A	A	Hoxd3_MA0912.1	12	1	-	9.084721074972627	7.877969154967763	CTGTATTAATTACATA
chr7	77831102	77831103	chr7:77831103:A:G	rs75330800	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	78084063	78084064	chr7:78084064:T:C	rs28617575	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	78226576	78226577	chr7:78226577:G:A	rs13231842	G	A	G	Hoxd3_MA0912.1	1	1	-	7.143703812249898	9.227764299786028	CCGAGGCAATTACCAG
chr7	78514909	78514910	chr7:78514910:G:A	rs78559238	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr7	78902777	78902778	chr7:78902778:A:G	rs17151643	A	G	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	79046267	79046268	chr7:79046268:G:A	rs138583943	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	79347385	79347386	chr7:79347386:T:C	rs10953840	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	79610960	79610961	chr7:79610961:G:C	rs73377607	G	C	G	Hoxd3_MA0912.1	4	1	+	9.620545116270849	8.042467205557767	TTGTGTCAATTACTTT
chr7	80046997	80046998	chr7:80046998:T:G	rs10486917	T	G	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	80127815	80127816	chr7:80127816:A:C	rs184133658	A	C	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	80136401	80136402	chr7:80136402:T:C	rs141050594	T	C	T	Hoxd3_MA0912.1	0	1	+	8.88874717711205	8.836241679734119	TTGGTTTAATGACTGC
chr7	80285029	80285030	chr7:80285030:G:A	rs73380585	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr7	80512900	80512901	chr7:80512901:A:G	rs12532509	A	G	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	80563908	80563909	chr7:80563909:G:C	rs79764518	G	C	G	Hoxd3_MA0912.1	0	1	+	7.515323288157342	9.499699718040448	GTGGGGCAATTAAAGC
chr7	80563917	80563918	chr7:80563918:T:C	rs553973174	T	C	T	Hoxd3_MA0912.1	8	1	-	8.670495771235457	1.7819233116700957	TTGCTTTAATTGCCCC
chr7	80563942	80563943	chr7:80563943:C:T	rs60451642	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	80833587	80833588	chr7:80833588:G:A	rs929346	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr7	80917309	80917310	chr7:80917310:G:A	rs73376611	G	A	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	81156530	81156531	chr7:81156531:A:T	rs327730	A	T	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	81162097	81162098	chr7:81162098:T:C	rs78499237	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	81267621	81267622	chr7:81267622:G:A	rs11971159	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	81529958	81529959	chr7:81529959:C:T	rs150867893	C	T	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	81601797	81601798	chr7:81601798:G:A	rs9640926	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	82288926	82288927	chr7:82288927:G:A	rs1395730785	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	82288948	82288949	chr7:82288949:G:A	rs116894339	G	A	A	Hoxd3_MA0912.1	3	1	-	8.253558490573553	8.990239713153226	CTGCGTTCATTACAGC
chr7	82319782	82319783	chr7:82319783:T:G	rs139132370	T	G	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr7	82319806	82319807	chr7:82319807:T:A	rs111855424	T	A	T	Hoxd3_MA0912.1	4	1	-	7.469099388970221	7.469099388970221	CAGGACTCATTACTCC
chr7	82319818	82319819	chr7:82319819:A:G	rs73704218	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	82336831	82336832	chr7:82336832:A:G	rs2299171	A	G	A	Hoxd3_MA0912.1	8	1	+	8.061722756263608	1.1731502966982434	TAGAGCTAATTGGTGT
chr7	82375807	82375808	chr7:82375808:C:G	rs2190237	C	G	G	Hoxd3_MA0912.1	14	1	+	7.493527119235591	7.317111753951142	CTGTCTTAATTGCCCA
chr7	82566395	82566396	chr7:82566396:C:G	rs6957860	C	G	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr7	82975953	82975954	chr7:82975954:T:C	rs79918151	T	C	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	83448185	83448186	chr7:83448186:C:T	rs117108941	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr7	83704834	83704835	chr7:83704835:C:A	rs62475089	C	A	C	Hoxd3_MA0912.1	1	1	-	8.348345994794204	10.432406482330334	TGGAGGTAATGAAACT
chr7	83777143	83777144	chr7:83777144:G:A	rs6974472	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	84042552	84042553	chr7:84042553:T:C	rs2372021	T	C	C	Hoxd3_MA0912.1	1	1	+	8.362139359170413	6.278078871634284	CTCAGATAATTAGCAT
chr7	84042583	84042584	chr7:84042584:A:G	rs73185480	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	84315119	84315120	chr7:84315120:A:G	rs59630020	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	84529271	84529272	chr7:84529272:T:C	rs1014498	T	C	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	84939627	84939628	chr7:84939628:C:T	rs565622024	C	T	c	Hoxd3_MA0912.1	19	0	-	0	0	.
chr7	85090021	85090022	chr7:85090022:C:T	rs10954763	C	T	C	Hoxd3_MA0912.1	6	1	+	7.676680159836586	9.462606108017578	GTGGTCCAATTACTCT
chr7	85164606	85164607	chr7:85164607:C:T	rs141825111	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	85404910	85404911	chr7:85404911:G:T	rs1583081	G	T	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	85733661	85733662	chr7:85733662:A:T	rs543321616	A	T	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	85733675	85733676	chr7:85733676:T:C	rs13247047	T	C	T	Hoxd3_MA0912.1	0	1	+	9.062190928980877	9.009685431602946	TTGAGCTCATTGCCCT
chr7	85964790	85964791	chr7:85964791:G:A	rs7790105	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	85965197	85965198	chr7:85965198:A:G	rs10247516	A	G	a	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr7	86978077	86978078	chr7:86978078:G:A	rs1767720	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr7	87002980	87002981	chr7:87002981:G:C	rs1617490	G	C	c	Hoxd3_MA0912.1	33	0	-	0	0	.
chr7	87153332	87153333	chr7:87153333:C:T	rs532496079	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	87217901	87217902	chr7:87217902:C:T	rs74388994	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	87317220	87317221	chr7:87317221:A:C	rs144029120	A	C	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	87581657	87581658	chr7:87581658:C:A	rs1202172	C	A	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	87962282	87962283	chr7:87962283:G:C	rs138927920	G	C	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	88299390	88299391	chr7:88299391:G:A	rs77502039	G	A	g	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	88318485	88318486	chr7:88318486:T:A	rs78827305	T	A	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	88331514	88331515	chr7:88331515:A:T	rs719044	A	T	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	89091219	89091220	chr7:89091220:A:G	rs6954549	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	89124475	89124476	chr7:89124476:A:G	rs12667018	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr7	89138711	89138712	chr7:89138712:A:T	rs6465183	A	T	A	Hoxd3_MA0912.1	5	1	-	8.690742861876394	7.837384376877501	ATGATTCAATTACCTC
chr7	89150509	89150510	chr7:89150510:A:G	rs10281567	A	G	A	Hoxd3_MA0912.1	11	1	+	10.065553113359794	8.279627165178802	TTGCATTAATTAAATT
chr7	90475309	90475310	chr7:90475310:C:G	rs177663	C	G	G	Hoxd3_MA0912.1	5	1	-	10.111657995266258	9.92313166158542	TTGGCGTAATTATCCT
chr7	90658456	90658457	chr7:90658457:C:A	rs1075012	C	A	C	Hoxd3_MA0912.1	12	1	+	8.838899572848677	8.838899572848677	GTGATCTAATTACCTC
chr7	90720533	90720534	chr7:90720534:T:A	rs17163109	T	A	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	90772698	90772699	chr7:90772699:G:A	rs12534848	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr7	90916413	90916414	chr7:90916414:G:A	rs3808242	G	A	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	91125972	91125973	chr7:91125973:T:C	rs76600967	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	91137556	91137557	chr7:91137557:A:G	rs115089859	A	G	A	Hoxd3_MA0912.1	3	1	+	10.692065799044263	10.57796804800524	CAGATTTAATTAACTT
chr7	91295203	91295204	chr7:91295204:C:A	rs73708012	C	A	C	Hoxd3_MA0912.1	13	1	-	8.342777306253035	9.316618488453745	CAGATGTAATTATGCT
chr7	91295936	91295937	chr7:91295937:A:C	rs62468554	A	C	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr7	92973548	92973549	chr7:92973549:C:T	rs71560839	C	T	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr7	93118310	93118311	chr7:93118311:T:C	rs73216097	T	C	t	Hoxd3_MA0912.1	9	1	+	8.226832280817387	1.3382598212520231	CTGGCTTAATTGATCC
chr7	93921513	93921514	chr7:93921514:A:G	rs75457046	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	94422482	94422483	chr7:94422483:C:A	rs10235102	C	A	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	94450098	94450099	chr7:94450099:T:C	rs17268069	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	94851630	94851631	chr7:94851631:G:T	rs12704767	G	T	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	95012192	95012193	chr7:95012193:C:T	rs854736	C	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	95051475	95051476	chr7:95051476:C:T	rs137987930	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr7	95263142	95263143	chr7:95263143:T:C	rs73223920	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr7	95412229	95412230	chr7:95412230:G:T	rs2068604	G	T	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr7	95509442	95509443	chr7:95509443:A:G	rs737902	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr7	95583746	95583747	chr7:95583747:G:A	rs6930	G	A	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	95820670	95820671	chr7:95820671:A:G	rs2690289	A	G	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr7	96030438	96030439	chr7:96030439:G:A	rs2188507	G	A	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr7	96093610	96093611	chr7:96093611:A:G	rs116121710	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	96238797	96238798	chr7:96238798:C:A	rs7812151	C	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	96415093	96415094	chr7:96415094:G:A	rs1859278	G	A	A	Hoxd3_MA0912.1	7	1	-	7.722345643062839	2.91660476661293	CTGAGTTCATTGATGG
chr7	96596313	96596314	chr7:96596314:A:G	rs6949227	A	G	A	Hoxd3_MA0912.1	3	1	-	9.39175285630738	8.655071633727706	TTATGGTAATTACTGG
chr7	96832221	96832222	chr7:96832222:G:C	rs1947227	G	C	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	96991278	96991279	chr7:96991279:A:G	rs17168126	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr7	98568092	98568093	chr7:98568093:T:G	rs705330	T	G	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr7	98913970	98913971	chr7:98913971:G:C	rs6465731	G	C	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr7	99275753	99275754	chr7:99275754:A:C	rs60205316	A	C	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	99510103	99510104	chr7:99510104:C:A	rs3901286	C	A	A	Hoxd3_MA0912.1	3	1	-	8.74798782242564	8.297749127332374	TTTGTTTAATTAGCTG
chr7	99562653	99562654	chr7:99562654:G:A	rs1022700307	G	A	G	Hoxd3_MA0912.1	4	1	+	9.456954319276777	8.852717590764403	GAGGGGTAATTAACGT
chr7	99990601	99990602	chr7:99990602:G:A	rs886453	G	A	.	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	100080962	100080963	chr7:100080963:G:A	rs188445679	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	100167598	100167599	chr7:100167599:G:C	rs145517289	G	C	G	Hoxd3_MA0912.1	0	1	-	8.192728561837042	6.208352131953934	CTGTGTTAATGAGCTG
chr7	100949086	100949087	chr7:100949087:C:G	rs79487531	C	G	C	Hoxd3_MA0912.1	12	1	+	11.140597444618194	10.173075213679164	CTGTGTTAATTACTCC
chr7	101084130	101084131	chr7:101084131:C:T	rs6968929	C	T	T	Hoxd3_MA0912.1	12	1	+	10.064216548780157	8.857464628775293	ATGAATTAATTACGGT
chr7	101108343	101108344	chr7:101108344:C:G	rs115974749	C	G	C	Hoxd3_MA0912.1	4	1	-	9.003156454905495	7.425078544192415	CTGTGGTAATTGCAGG
chr7	101134583	101134584	chr7:101134584:G:T	chr7:101134584:G:T	G	T	G	Hoxd3_MA0912.1	1	1	+	7.966420547273707	10.050481034809838	TGGAGGTAATTAGTTG
chr7	101321440	101321441	chr7:101321441:G:A	rs28719520	G	A	G	Hoxd3_MA0912.1	13	1	-	6.719309088474889	6.115072359962515	CGGTGTTAATGAGCCC
chr7	101456390	101456391	chr7:101456391:C:A	rs6973991	C	A	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr7	101456399	101456400	chr7:101456400:C:T	rs140208948	C	T	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	101575574	101575575	chr7:101575575:T:C	rs79157498	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	101677290	101677291	chr7:101677291:A:G	rs712846	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	101718076	101718077	chr7:101718077:T:C	rs371512486	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	101874167	101874168	chr7:101874168:C:T	rs28409703	C	T	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr7	101927802	101927803	chr7:101927803:C:T	rs2906648	C	T	C	Hoxd3_MA0912.1	13	1	+	9.799466381221194	9.19522965270882	CTTAGGTAATTAACGA
chr7	102028013	102028014	chr7:102028014:G:A	rs4729769	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	102028021	102028022	chr7:102028022:T:C	rs4727517	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	102391181	102391182	chr7:102391182:A:T	rs10235407	A	T	a	Hoxd3_MA0912.1	7	1	+	8.029128674957809	1.24944543232738	CTGAGCCAATTGCTTT
chr7	102432156	102432157	chr7:102432157:A:G	rs13226125	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	102440089	102440090	chr7:102440090:G:T	rs73189811	G	T	G	Hoxd3_MA0912.1	14	1	-	10.613716658653306	9.493335963604725	TTTAATTAATTAATCT
chr7	102713568	102713569	chr7:102713569:T:C	rs1315714495	T	C	N	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	103059604	103059605	chr7:103059605:T:C	rs149894605	T	C	T	Hoxd3_MA0912.1	9	1	+	9.611533402858681	2.7229609432933186	ATGAGTTAATTATTGG
chr7	103447961	103447962	chr7:103447962:A:C	rs1004245	A	C	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	103601548	103601549	chr7:103601549:G:C	rs362637	G	C	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	103930318	103930319	chr7:103930319:C:T	rs6972635	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	103949453	103949454	chr7:103949454:A:G	rs35662900	A	G	A	Hoxd3_MA0912.1	1	1	-	9.185506185970272	7.101445698434143	ATGACCTAATTACCTC
chr7	104254955	104254956	chr7:104254956:C:G	rs4727592	C	G	C	Hoxd3_MA0912.1	3	1	-	11.239356986008781	10.05243706833584	TTGGGTCAATTACCCT
chr7	104692606	104692607	chr7:104692607:T:A	rs4311596	T	A	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	104772906	104772907	chr7:104772907:G:A	rs73713436	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	104797418	104797419	chr7:104797419:A:G	rs2470959	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr7	104900531	104900532	chr7:104900532:A:G	rs73184023	A	G	A	Hoxd3_MA0912.1	8	1	+	9.318069912822954	2.4294974532575915	TTTTAGTAATTATCCT
chr7	104984782	104984783	chr7:104984783:T:C	rs193078579	T	C	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	105150059	105150060	chr7:105150060:A:C	rs117200858	A	C	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	105515090	105515091	chr7:105515091:G:A	rs62486981	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	105796374	105796375	chr7:105796375:A:T	rs4727626	A	T	A	Hoxd3_MA0912.1	15	1	-	9.996874715143084	8.331866951554174	CTTAATTAATTAATTT
chr7	105907667	105907668	chr7:105907668:T:G	rs757843	T	G	G	Hoxd3_MA0912.1	10	1	+	8.811154891191068	6.83721252501055	CTGAGCTCATTATCCC
chr7	105912045	105912046	chr7:105912046:A:C	rs73408393	A	C	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	105938519	105938520	chr7:105938520:G:T	rs193854	G	T	T	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	105938522	105938523	chr7:105938523:G:A	rs10267043	G	A	G	Hoxd3_MA0912.1	13	1	-	9.117445246180221	8.513208517667847	CTTTGTTAATTAGCAT
chr7	106047378	106047379	chr7:106047379:G:A	rs7795448	G	A	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	106089538	106089539	chr7:106089539:G:C	rs13226202	G	C	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr7	106102219	106102220	chr7:106102220:G:C	rs7807114	G	C	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	106143866	106143867	chr7:106143867:A:G	rs10258864	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	106143883	106143884	chr7:106143884:T:A	rs75643711	T	A	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr7	106285978	106285979	chr7:106285979:C:T	rs142090048	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	106487064	106487065	chr7:106487065:G:T	rs1476675	G	T	-	Hoxd3_MA0912.1	20	0	-	0	0	.
chr7	106574941	106574942	chr7:106574942:C:A	rs13224106	C	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	106917196	106917197	chr7:106917197:C:G	rs849420	C	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	107464919	107464920	chr7:107464920:C:T	rs4727682	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr7	107726671	107726672	chr7:107726672:C:T	chr7:107726672:C:T	C	T	C	Hoxd3_MA0912.1	5	1	+	8.239610524170821	8.55693196605723	TAATGCTAATTACCTC
chr7	107920205	107920206	chr7:107920206:G:T	rs7777259	G	T	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	107920236	107920237	chr7:107920237:T:C	rs2158835	T	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	108010915	108010916	chr7:108010916:T:G	rs6979091	T	G	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	108020921	108020922	chr7:108020922:A:G	rs73726677	A	G	A	Hoxd3_MA0912.1	12	1	+	9.071878354812522	8.104356123873492	CTGGTGTAATTGATCC
chr7	108167413	108167414	chr7:108167414:C:A	rs117792943	C	A	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	108863453	108863454	chr7:108863454:T:G	rs55944220	T	G	T	Hoxd3_MA0912.1	6	1	+	8.791485971254103	2.0468498018417742	AAGAGCTAATTAGCAT
chr7	109222080	109222081	chr7:109222081:C:G	rs10251450	C	G	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr7	109503834	109503835	chr7:109503835:T:A	rs12111950	T	A	T	Hoxd3_MA0912.1	14	1	+	10.172734706177726	9.616690457261436	CTGATCTAATTACATG
chr7	109891000	109891001	chr7:109891001:T:C	rs60394411	T	C	T	Hoxd3_MA0912.1	5	1	+	9.866027795883411	9.548706353997003	ATGTGTTAATTACTTG
chr7	109930292	109930293	chr7:109930293:C:A	rs73195850	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	110227770	110227771	chr7:110227771:A:T	rs79325652	A	T	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	110250907	110250908	chr7:110250908:T:C	rs719530	T	C	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	110387003	110387004	chr7:110387004:G:A	rs568379098	G	A	g	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	110387008	110387009	chr7:110387009:A:G	rs73198766	A	G	A	Hoxd3_MA0912.1	12	1	-	8.058626811994374	9.265378731999238	CTGGGGTCATTATTGG
chr7	110387027	110387028	chr7:110387028:G:T	rs900994275	G	T	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	110545424	110545425	chr7:110545425:G:A	rs73205273	G	A	g	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	111030057	111030058	chr7:111030058:G:A	rs10953673	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr7	111034846	111034847	chr7:111034847:A:C	rs28505381	A	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	111175135	111175136	chr7:111175136:G:A	chr7:111175136:G:A	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr7	111474744	111474745	chr7:111474745:T:C	rs76306865	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr7	111872573	111872574	chr7:111872574:T:C	rs28593141	T	C	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	111954759	111954760	chr7:111954760:G:A	rs185845196	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	112285795	112285796	chr7:112285796:A:T	rs6976889	A	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr7	112400416	112400417	chr7:112400417:C:T	rs2708594	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr7	112567027	112567028	chr7:112567028:A:T	rs78790686	A	T	A	Hoxd3_MA0912.1	13	1	+	10.53636071610582	10.53636071610582	CTGTTTTAATTAAACC
chr7	112572487	112572488	chr7:112572488:A:G	rs3111438	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr7	112971919	112971920	chr7:112971920:A:C	rs10237980	A	C	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	112994983	112994984	chr7:112994984:G:A	rs117482171	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr7	113677652	113677653	chr7:113677653:T:C	rs12705891	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	113715309	113715310	chr7:113715310:G:A	rs17619887	G	A	A	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr7	114131262	114131263	chr7:114131263:A:T	rs12666413	A	T	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	114359167	114359168	chr7:114359168:T:C	rs2690836	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr7	114645666	114645667	chr7:114645667:A:G	chr7:114645667:A:G	A	G	A	Hoxd3_MA0912.1	14	1	-	11.541288665271363	12.105625111403654	ATGAGCTAATTAACTT
chr7	115300092	115300093	chr7:115300093:C:T	rs6968125	C	T	C	Hoxd3_MA0912.1	3	1	-	8.933098717950777	9.047196468989801	TAGGTCTAATTAACAG
chr7	115300104	115300105	chr7:115300105:G:A	rs6968380	G	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	116084164	116084165	chr7:116084165:C:A	rs1306234148	C	A	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	116316759	116316760	chr7:116316760:T:C	rs60904433	T	C	.	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	116364406	116364407	chr7:116364407:C:T	rs11974466	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	116550519	116550520	chr7:116550520:T:C	rs897095285	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr7	116550542	116550543	chr7:116550543:C:T	rs3801995	C	T	-	Hoxd3_MA0912.1	11	1	-	7.465871134348147	9.25179708252914	TTGCTCTAATTGCCCA
chr7	116688327	116688328	chr7:116688328:G:A	rs141978615	G	A	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr7	117020480	117020481	chr7:117020481:T:G	rs78713951	T	G	T	Hoxd3_MA0912.1	5	1	+	6.669110225149716	6.540315116944145	CTGGCTTCATGACCCC
chr7	117836708	117836709	chr7:117836709:G:A	rs35257069	G	A	a	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	118121616	118121617	chr7:118121617:G:A	rs2402303	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr7	118571643	118571644	chr7:118571644:G:A	rs10237750	G	A	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	118664338	118664339	chr7:118664339:G:T	rs13232398	G	T	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	118664358	118664359	chr7:118664359:A:G	rs11763035	A	G	A	Hoxd3_MA0912.1	6	1	-	9.31342195492502	7.527496006744029	AAGAGGTAATTAAGGT
chr7	119033752	119033753	chr7:119033753:T:C	rs10272389	T	C	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr7	120780758	120780759	chr7:120780759:T:C	rs41614	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	120873741	120873742	chr7:120873742:G:A	rs74369618	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	121287737	121287738	chr7:121287738:G:A	rs2952556	G	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr7	121497003	121497004	chr7:121497004:A:C	rs73225223	A	C	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	121543199	121543200	chr7:121543200:G:A	rs190123955	G	A	G	Hoxd3_MA0912.1	2	1	+	7.856319529806141	6.406484485649102	CTGGGTTCATGACATT
chr7	121547169	121547170	chr7:121547170:C:A	rs6964469	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr7	121739561	121739562	chr7:121739562:C:T	rs2041650	C	T	T	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	121798547	121798548	chr7:121798548:T:A	rs740961	T	A	A	Hoxd3_MA0912.1	1	1	-	8.742329700576668	9.968565914738608	TAGATTCAATTACAGT
chr7	121885429	121885430	chr7:121885430:C:T	rs2191783	C	T	c	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	121885440	121885441	chr7:121885441:A:G	rs740966	A	G	A	Hoxd3_MA0912.1	14	1	-	9.345683114100332	9.910019560232623	CTTGGCTAATTAAATG
chr7	122415704	122415705	chr7:122415705:C:T	rs6979796	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr7	122438359	122438360	chr7:122438360:T:G	rs2074589	T	G	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr7	122689502	122689503	chr7:122689503:C:T	rs73220282	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr7	122893962	122893963	chr7:122893963:T:C	rs12706456	T	C	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	123011113	123011114	chr7:123011114:T:C	rs7787180	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	123204148	123204149	chr7:123204149:A:G	rs2204297	A	G	G	Hoxd3_MA0912.1	1	1	-	9.077038081764186	6.992977594228055	CTTAGCTAATTATTTT
chr7	123232924	123232925	chr7:123232925:A:G	rs7785192	A	G	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr7	123296272	123296273	chr7:123296273:A:G	rs12534387	A	G	A	Hoxd3_MA0912.1	15	1	-	9.484641224435245	8.706936655847237	CTGGTCTAATTGCTGT
chr7	123622767	123622768	chr7:123622768:G:T	chr7:123622768:G:T	G	T	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr7	123633951	123633952	chr7:123633952:T:C	rs73718445	T	C	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	123666557	123666558	chr7:123666558:T:C	rs10247879	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr7	123709572	123709573	chr7:123709573:T:G	rs1506640	T	G	G	Hoxd3_MA0912.1	12	1	-	7.592565862621317	7.592565862621317	TTGGGCAAATTAACCC
chr7	124279374	124279375	chr7:124279375:G:A	rs73231976	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	124319398	124319399	chr7:124319399:C:T	rs78198525	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	124480768	124480769	chr7:124480769:C:T	rs66469910	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	124630293	124630294	chr7:124630294:G:T	rs2049439	G	T	T	Hoxd3_MA0912.1	14	1	-	11.024407551410471	9.90402685636189	TTGAAGTAATTAAACC
chr7	125027061	125027062	chr7:125027062:G:A	rs6964090	G	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	125994028	125994029	chr7:125994029:G:A	rs13245369	G	A	A	Hoxd3_MA0912.1	5	1	+	9.189134579740092	8.464571202946768	TTTGAGTAATTGACCT
chr7	126052515	126052516	chr7:126052516:G:A	rs4489264	G	A	G	Hoxd3_MA0912.1	2	1	+	8.670897440705373	7.221062396548335	AAGGGATAATTAATGC
chr7	126500056	126500057	chr7:126500057:T:C	rs28610277	T	C	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	126637210	126637211	chr7:126637211:G:A	rs12673189	G	A	A	Hoxd3_MA0912.1	0	1	-	6.9099195706324785	6.962425068010409	CTGGTGTCATGACTCC
chr7	127366873	127366874	chr7:127366874:C:T	rs11563463	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	127366898	127366899	chr7:127366899:C:T	rs17864202	C	T	C	Hoxd3_MA0912.1	5	1	+	9.915123860829366	10.232445302715774	CTGGACTAATTAGATT
chr7	127413949	127413950	chr7:127413950:C:T	rs17863297	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr7	127413981	127413982	chr7:127413982:A:G	rs79517621	A	G	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr7	127682559	127682560	chr7:127682560:C:T	rs712707	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	128076331	128076332	chr7:128076332:C:T	rs111643814	C	T	C	Hoxd3_MA0912.1	5	1	-	8.002091704556737	7.277528327763411	CACTGGTAATTACTCC
chr7	128100055	128100056	chr7:128100056:C:T	rs73239706	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr7	128137084	128137085	chr7:128137085:A:G	rs322750	A	G	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr7	128507064	128507065	chr7:128507065:T:C	rs7806863	T	C	T	Hoxd3_MA0912.1	0	1	+	8.626792517998007	8.574287020620076	TAGTGTTAATTAGGGT
chr7	128735548	128735549	chr7:128735549:A:G	rs339060	A	G	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	128740524	128740525	chr7:128740525:C:T	rs62479563	C	T	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr7	128755956	128755957	chr7:128755957:C:T	rs73236100	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	128837417	128837418	chr7:128837418:T:C	rs2291560	T	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	128949372	128949373	chr7:128949373:G:A	rs10954213	G	A	A	Hoxd3_MA0912.1	10	1	+	9.666451745700058	4.860710869250152	TTGGATTAATGAATGT
chr7	129061276	129061277	chr7:129061277:T:C	rs13246321	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr7	129085270	129085271	chr7:129085271:A:G	rs12706862	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	129362765	129362766	chr7:129362766:A:G	rs75954998	A	G	A	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	129499426	129499427	chr7:129499427:C:A	rs62489121	C	A	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	129772134	129772135	chr7:129772135:G:A	rs11982509	G	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	129909959	129909960	chr7:129909960:T:A	rs75094798	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	129949803	129949804	chr7:129949804:C:A	rs75267855	C	A	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	129949812	129949813	chr7:129949813:A:G	chr7:129949813:A:G	A	G	A	Hoxd3_MA0912.1	5	1	+	7.952727882704382	8.677291259497705	GTGGTATAATTACGCT
chr7	130054182	130054183	chr7:130054183:A:G	rs73481718	A	G	A	Hoxd3_MA0912.1	1	1	-	8.132760177376676	6.0486996898405465	ATGGGTCAATTGAACT
chr7	130144899	130144900	chr7:130144900:G:A	rs36105551	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	130294378	130294379	chr7:130294379:T:C	rs3807344	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	130388247	130388248	chr7:130388248:C:T	rs17330508	C	T	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr7	130732986	130732987	chr7:130732987:G:A	rs3909553	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr7	130754298	130754299	chr7:130754299:C:G	rs7783857	C	G	C	Hoxd3_MA0912.1	15	1	-	7.809866182521798	7.856170750563485	CTGAGGTCATTGCCTG
chr7	130893756	130893757	chr7:130893757:C:T	rs62473519	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr7	131244285	131244286	chr7:131244286:A:G	rs73153420	A	G	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr7	131244313	131244314	chr7:131244314:C:A	rs145373792	C	A	C	Hoxd3_MA0912.1	12	1	+	7.14640814421547	7.14640814421547	CTGTTTTCATGACCCG
chr7	131244323	131244324	chr7:131244324:C:T	rs56131832	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr7	131381840	131381841	chr7:131381841:A:G	rs115270288	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	131574616	131574617	chr7:131574617:G:T	rs7782208	G	T	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	131698796	131698797	chr7:131698797:C:T	rs10282190	C	T	T	Hoxd3_MA0912.1	28	0	+	0	0	.
chr7	131722713	131722714	chr7:131722714:C:T	rs12540278	C	T	C	Hoxd3_MA0912.1	1	1	+	7.616896384563647	9.700956872099777	CCGGGCTAATTGCTTT
chr7	131773685	131773686	chr7:131773686:T:C	rs66717317	T	C	C	Hoxd3_MA0912.1	6	1	+	8.39544449635953	6.609518548178539	CTGATGTCATTATCCC
chr7	132083522	132083523	chr7:132083523:C:T	rs1514051	C	T	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr7	132190508	132190509	chr7:132190509:G:C	rs58803643	G	C	G	Hoxd3_MA0912.1	0	1	-	8.878705309018448	6.894328879135341	CAGGACTAATTAAATC
chr7	132420740	132420741	chr7:132420741:T:C	rs2288969	T	C	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	132440098	132440099	chr7:132440099:G:C	rs192709839	G	C	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	132459977	132459978	chr7:132459978:A:G	rs156676	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr7	132659811	132659812	chr7:132659812:T:G	rs3734979	T	G	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	133023841	133023842	chr7:133023842:G:A	rs184677331	G	A	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr7	133525620	133525621	chr7:133525621:G:A	rs34218501	G	A	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr7	133575930	133575931	chr7:133575931:T:C	rs10954419	T	C	T	Hoxd3_MA0912.1	2	1	+	7.862381250639199	7.396097402495995	CTTTGGTAATTGCTCG
chr7	133713851	133713852	chr7:133713852:A:G	rs1362735	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr7	133957805	133957806	chr7:133957806:A:G	rs2971966	A	G	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr7	133957841	133957842	chr7:133957842:A:G	rs2971967	A	G	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	133957845	133957846	chr7:133957846:C:A	rs2971968	C	A	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr7	134317475	134317476	chr7:134317476:C:A	rs1646733	C	A	C	Hoxd3_MA0912.1	14	1	+	9.937038317686381	8.8166576226378	CTGATTTAATTAGGCT
chr7	134340411	134340412	chr7:134340412:G:C	rs6950675	G	C	C	Hoxd3_MA0912.1	28	0	+	0	0	.
chr7	134355862	134355863	chr7:134355863:A:T	rs62463006	A	T	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr7	134355881	134355882	chr7:134355882:T:C	rs4728316	T	C	T	Hoxd3_MA0912.1	0	1	+	8.538813943280775	8.486308445902845	TGCATGTAATTACCCT
chr7	134410872	134410873	chr7:134410873:T:G	rs890684824	T	G	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	134517818	134517819	chr7:134517819:T:C	rs7809138	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr7	134587845	134587846	chr7:134587846:A:G	rs10275567	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	134703512	134703513	chr7:134703513:G:C	rs78647522	G	C	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr7	134855105	134855106	chr7:134855106:G:A	rs741689	G	A	G	Hoxd3_MA0912.1	2	1	+	8.934810340913463	7.484975296756426	ATGATCCAATTAAAGT
chr7	135210581	135210582	chr7:135210582:C:T	rs117370979	C	T	C	Hoxd3_MA0912.1	5	1	-	7.884958437139583	7.160395060346258	CTGCTGTAATTGCTCC
chr7	135261246	135261247	chr7:135261247:C:T	rs1646885	C	T	C	Hoxd3_MA0912.1	12	1	-	8.66131508254782	9.62883731348685	TTGATTCAATTAGCAT
chr7	135261247	135261248	chr7:135261248:T:G	rs1618426	T	G	T	Hoxd3_MA0912.1	11	1	-	8.66131508254782	1.91667891313549	TTGATTCAATTAGCAT
chr7	135300966	135300967	chr7:135300967:A:C	rs1559533	A	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	135321979	135321980	chr7:135321980:A:T	rs34437188	A	T	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr7	135479044	135479045	chr7:135479045:T:C	rs117350477	T	C	T	Hoxd3_MA0912.1	2	1	-	8.68254102086817	10.132376065025209	CTATGTCAATTAATCT
chr7	135621137	135621138	chr7:135621138:C:A	rs7784162	C	A	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr7	135719613	135719614	chr7:135719614:A:G	rs3110815	A	G	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	135784713	135784714	chr7:135784714:G:A	rs6977424	G	A	g	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	137238982	137238983	chr7:137238983:T:C	rs891586	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr7	137325841	137325842	chr7:137325842:A:C	rs2290268	A	C	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr7	137580067	137580068	chr7:137580068:G:A	rs28513274	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr7	137580095	137580096	chr7:137580096:T:C	rs139195046	T	C	T	Hoxd3_MA0912.1	9	1	+	7.484113018267795	0.5955405587024332	TTGAGCTCATTGAGCT
chr7	138007852	138007853	chr7:138007853:C:T	rs113995601	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr7	138077455	138077456	chr7:138077456:C:G	rs73155728	C	G	c	Hoxd3_MA0912.1	21	0	+	0	0	.
chr7	138425555	138425556	chr7:138425556:C:G	rs4626544	C	G	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr7	138459849	138459850	chr7:138459850:T:A	rs536739056	T	A	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	138630034	138630035	chr7:138630035:C:A	rs1659808	C	A	A	Hoxd3_MA0912.1	7	1	+	9.103606377024636	11.077548743205154	TTGAAATCATTACACT
chr7	138807093	138807094	chr7:138807094:G:A	rs4732339	G	A	A	Hoxd3_MA0912.1	13	1	-	10.520972466427095	9.91673573791472	TTAATTTAATTAACTT
chr7	138908262	138908263	chr7:138908263:C:T	rs149966052	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr7	138963775	138963776	chr7:138963776:A:G	rs7791570	A	G	A	Hoxd3_MA0912.1	3	1	+	9.058537731066604	8.94443998002758	CTAACTTAATTAACGG
chr7	138963790	138963791	chr7:138963791:G:A	rs512927	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	139132184	139132185	chr7:139132185:A:G	rs7778825	A	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	139170201	139170202	chr7:139170202:G:A	rs149378547	G	A	G	Hoxd3_MA0912.1	5	1	-	8.251297837375137	8.568619279261545	TTGATCTCATTACTTG
chr7	139342749	139342750	chr7:139342750:T:C	rs11771715	T	C	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr7	139495355	139495356	chr7:139495356:A:G	rs7798842	A	G	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	139582862	139582863	chr7:139582863:C:T	rs80060909	C	T	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	139632002	139632003	chr7:139632003:C:T	rs118152986	C	T	C	Hoxd3_MA0912.1	13	1	+	8.970518464824975	8.366281736312601	CTGACTTCATTACCTT
chr7	139876143	139876144	chr7:139876144:T:C	rs10237035	T	C	T	Hoxd3_MA0912.1	14	1	-	8.247605221451545	9.191570551215678	CTGGGGTAATTATTAA
chr7	139876161	139876162	chr7:139876162:A:G	rs79407723	A	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr7	140232388	140232389	chr7:140232389:C:T	rs71543361	C	T	C	Hoxd3_MA0912.1	4	1	-	7.578898543654615	6.974661815142241	CTGGGATAATGGCAGT
chr7	140984026	140984027	chr7:140984027:G:A	rs11980547	G	A	G	Hoxd3_MA0912.1	15	1	+	8.3327943572687	7.491795730309484	ATAGACTAATTACAGG
chr7	141426000	141426001	chr7:141426001:A:G	rs11977900	A	G	A	Hoxd3_MA0912.1	13	1	+	8.963109570578471	7.989268388377761	ATGTGCTCATTAAACT
chr7	141558578	141558579	chr7:141558579:T:C	rs74666278	T	C	C	Hoxd3_MA0912.1	6	1	+	9.099997224934539	7.314071276753545	ATGCTATAATTAACTT
chr7	141838940	141838941	chr7:141838941:T:C	rs73171695	T	C	T	Hoxd3_MA0912.1	8	1	-	7.698937761830258	0.8103653022648951	TTGGGTCAATTGAGGT
chr7	142164363	142164364	chr7:142164364:C:T	rs67637690	C	T	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	142355529	142355530	chr7:142355530:G:A	rs60685619	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	142355535	142355536	chr7:142355536:A:G	rs2854534	A	G	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr7	142513698	142513699	chr7:142513699:A:T	rs796908539	A	T	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr7	142521095	142521096	chr7:142521096:T:C	rs367610689	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr7	142521099	142521100	chr7:142521100:C:A	chr7:142521100:C:A	C	A	a	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	142521099	142521100	chr7:142521100:C:G	rs111224650	C	G	a	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	142699171	142699172	chr7:142699172:A:G	rs2367342	A	G	A	Hoxd3_MA0912.1	20	0	+	0	0	.
chr7	142815290	142815291	chr7:142815291:C:A	rs112137961	C	A	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr7	142835087	142835088	chr7:142835088:T:C	rs6464533	T	C	T	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr7	142844358	142844359	chr7:142844359:C:G	rs17778890	C	G	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr7	142845163	142845164	chr7:142845164:A:G	rs11761928	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	143052855	143052856	chr7:143052856:C:T	rs11975892	C	T	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr7	143406286	143406287	chr7:143406287:T:C	rs4283960	T	C	C	Hoxd3_MA0912.1	10	1	+	9.232143890789995	2.4524606481595677	ATGATCTAATTAATCA
chr7	144030624	144030625	chr7:144030625:G:T	rs10224101	G	T	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	144031690	144031691	chr7:144031691:G:T	rs4726664	G	T	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr7	145611248	145611249	chr7:145611249:A:C	rs850498	A	C	A	Hoxd3_MA0912.1	12	1	+	9.331523077404244	9.331523077404244	TTGAGATAATTGATTT
chr7	145665777	145665778	chr7:145665778:A:C	rs6962101	A	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	145699047	145699048	chr7:145699048:A:G	rs850545	A	G	G	Hoxd3_MA0912.1	7	1	+	10.463329238832484	3.6836459962020585	TTGACCTAATTAAAGT
chr7	146345402	146345403	chr7:146345403:G:A	rs10231549	G	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr7	147486416	147486417	chr7:147486417:C:A	rs2286125	C	A	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	147508687	147508688	chr7:147508688:A:G	rs1881443	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr7	147570103	147570104	chr7:147570104:G:A	rs6966095	G	A	G	Hoxd3_MA0912.1	14	1	-	8.42987499032792	7.86553854419563	AATGGGTAATTATCCT
chr7	147875440	147875441	chr7:147875441:C:T	chr7:147875441:C:T	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	147875477	147875478	chr7:147875478:A:G	rs4725749	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	148428776	148428777	chr7:148428777:C:T	rs4433053	C	T	C	Hoxd3_MA0912.1	14	1	-	8.281538835184056	7.337573505419922	TTGATCCCATTACCGT
chr7	148562782	148562783	chr7:148562783:C:T	rs115906195	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr7	148590927	148590928	chr7:148590928:G:T	rs62624492	G	T	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	148630390	148630391	chr7:148630391:T:C	rs713591	T	C	T	Hoxd3_MA0912.1	13	1	+	9.310801527317501	9.915038255829876	ATATGCTAATTACTGT
chr7	148640058	148640059	chr7:148640059:G:A	rs11763142	G	A	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr7	148773226	148773227	chr7:148773227:C:T	rs2373414	C	T	C	Hoxd3_MA0912.1	12	1	-	8.098896103676779	9.06641833461581	GTGGGCTAATTAGAGG
chr7	148846432	148846433	chr7:148846433:A:G	rs10274535	A	G	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr7	148979899	148979900	chr7:148979900:G:A	rs10280377	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	149233900	149233901	chr7:149233901:C:T	rs77802589	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr7	150281731	150281732	chr7:150281732:A:G	rs71537070	A	G	.	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr7	150614805	150614806	chr7:150614806:T:C	rs17837503	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr7	150715050	150715051	chr7:150715051:C:A	rs60958118	C	A	C	Hoxd3_MA0912.1	4	1	-	8.008989636706014	7.404752908193641	ATGTGCTCATTAATGC
chr7	150788685	150788686	chr7:150788686:C:T	rs367603692	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr7	150828189	150828190	chr7:150828190:G:A	rs34074336	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr7	151058920	151058921	chr7:151058921:G:C	rs7809946	G	C	G	Hoxd3_MA0912.1	13	1	-	8.440800802117343	6.8627228914042595	ACGAGTTAATTAACAC
chr7	151080249	151080250	chr7:151080250:G:A	rs988787308	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	151080262	151080263	chr7:151080263:G:A	rs914583575	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr7	151080282	151080283	chr7:151080283:T:A	rs147189244	T	A	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr7	151139152	151139153	chr7:151139153:A:G	rs3823588	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	151300226	151300227	chr7:151300227:A:G	rs1860116	A	G	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	151668313	151668314	chr7:151668314:T:C	rs1362235	T	C	-	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr7	151727331	151727332	chr7:151727332:C:T	rs188577790	C	T	-	Hoxd3_MA0912.1	26	0	-	0	0	.
chr7	152159884	152159885	chr7:152159885:C:T	rs10216286	C	T	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr7	152574992	152574993	chr7:152574993:G:A	rs12671283	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr7	152608433	152608434	chr7:152608434:A:C	rs60636882	A	C	A	Hoxd3_MA0912.1	8	1	+	8.377411626571664	3.8867344398046724	TTTTGGTCATTAACCC
chr7	152840384	152840385	chr7:152840385:C:T	rs116576958	C	T	C	Hoxd3_MA0912.1	7	1	+	9.406059802751695	4.600318926301787	CTGACGTCATTACCCT
chr7	153006310	153006311	chr7:153006311:C:T	rs520556	C	T	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr7	153072933	153072934	chr7:153072934:A:G	rs1404591	A	G	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	153432830	153432831	chr7:153432831:T:C	rs10261198	T	C	C	Hoxd3_MA0912.1	10	1	+	9.526952250174554	2.747269007544128	TTAATTTAATTACAGC
chr7	154137684	154137685	chr7:154137685:C:G	rs113825440	C	G	C	Hoxd3_MA0912.1	3	1	-	8.545170633980806	7.358250716307865	TTTGGATAATTAGCTC
chr7	154307923	154307924	chr7:154307924:G:C	rs7807713	G	C	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr7	154348147	154348148	chr7:154348148:T:C	rs55849842	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr7	154620197	154620198	chr7:154620198:T:C	rs4960608	T	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr7	154640999	154641000	chr7:154641000:T:C	rs61448380	T	C	G	Hoxd3_MA0912.1	1	1	+	10.606638538055433	8.522578050519305	ATGGTCTAATTAATGT
chr7	154770361	154770362	chr7:154770362:G:A	rs55850657	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	155014341	155014342	chr7:155014342:G:C	rs306293	G	C	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	155144894	155144895	chr7:155144895:G:A	rs2969549	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr7	155206596	155206597	chr7:155206597:G:A	rs12719663	G	A	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr7	155206605	155206606	chr7:155206606:C:T	rs141360197	C	T	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr7	155206638	155206639	chr7:155206639:C:T	rs12719664	C	T	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr7	155316471	155316472	chr7:155316472:G:A	rs149987656	G	A	g	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	155410643	155410644	chr7:155410644:T:C	rs113134543	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr7	155438380	155438381	chr7:155438381:C:A	rs732398	C	A	C	Hoxd3_MA0912.1	12	1	+	7.411631632915225	7.411631632915225	TTGGGATCATTGCCGG
chr7	155507870	155507871	chr7:155507871:G:A	rs6459705	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr7	155661038	155661039	chr7:155661039:A:G	rs2362376	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr7	156046005	156046006	chr7:156046006:T:C	rs6459983	T	C	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr7	156049386	156049387	chr7:156049387:A:G	rs34327136	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	156089163	156089164	chr7:156089164:C:T	rs4716583	C	T	T	Hoxd3_MA0912.1	0	1	+	7.7620683475910095	7.81457384496894	CTGGGTTAATGAGACA
chr7	156195488	156195489	chr7:156195489:G:T	rs67064945	G	T	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr7	156365826	156365827	chr7:156365827:C:T	rs572898294	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr7	156725038	156725039	chr7:156725039:A:G	rs145029466	A	G	A	Hoxd3_MA0912.1	10	1	-	9.46984505733094	2.6901618147005126	TTTGAATAATTAAAGT
chr7	156725047	156725048	chr7:156725048:A:C	rs73166110	A	C	A	Hoxd3_MA0912.1	1	1	-	9.46984505733094	7.38578456979481	TTTGAATAATTAAAGT
chr7	156923218	156923219	chr7:156923219:A:G	rs543091803	A	G	A	Hoxd3_MA0912.1	9	1	-	8.189866371028154	1.3012939114627915	CTGTCTTCATTACTGT
chr7	156923246	156923247	chr7:156923247:G:A	rs10949613	G	A	-	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr7	156960686	156960687	chr7:156960687:T:C	rs2079985	T	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr7	157123033	157123034	chr7:157123034:T:C	rs6968796	T	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr7	157211848	157211849	chr7:157211849:A:G	rs116413497	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr7	157405671	157405672	chr7:157405672:G:A	rs184899519	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr7	157405708	157405709	chr7:157405709:T:G	rs139904085	T	G	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr7	157420906	157420907	chr7:157420907:T:C	rs1029898	T	C	T	Hoxd3_MA0912.1	1	1	+	7.4647913144807205	5.380730826944591	TTGAGGCCATTGCCCT
chr7	157881275	157881276	chr7:157881276:A:C	rs111369579	A	C	-	Hoxd3_MA0912.1	1	1	+	8.25891492595462	7.401090652580429	CAGGAGTCATTACAGT
chr7	157881287	157881288	chr7:157881288:A:G	rs77120118	A	G	-	Hoxd3_MA0912.1	13	1	+	8.25891492595462	7.285073743753911	CAGGAGTCATTACAGT
chr7	158021522	158021523	chr7:158021523:C:T	rs2043498	C	T	C	Hoxd3_MA0912.1	14	1	-	10.36379417095881	9.419828841194677	CTGTGCTAATTACCGA
chr7	158023437	158023438	chr7:158023438:G:A	rs4716880	G	A	G	Hoxd3_MA0912.1	4	1	+	9.811482644674673	9.207245916162298	TTGCGGTAATTAACAC
chr7	158155107	158155108	chr7:158155108:C:G	rs10249575	C	G	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr7	158414653	158414654	chr7:158414654:G:A	rs74466165	G	A	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr7	158414691	158414692	chr7:158414692:T:C	rs7457884	T	C	t	Hoxd3_MA0912.1	26	0	+	0	0	.
chr7	158816177	158816178	chr7:158816178:A:C	rs555280922	A	C	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr7	158816226	158816227	chr7:158816227:G:A	rs113798612	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	158847052	158847053	chr7:158847053:G:A	rs842680	G	A	g	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr7	158966910	158966911	chr7:158966911:G:A	rs76279590	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr7	159191597	159191598	chr7:159191598:G:A	rs378441	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr7	159250572	159250573	chr7:159250573:G:A	rs6969846	G	A	.	Hoxd3_MA0912.1	17	0	-	0	0	.
chr7	159291364	159291365	chr7:159291365:A:G	rs142166080	A	G	.	Hoxd3_MA0912.1	10	1	-	9.392423119882341	2.612739877251915	CTGTTTTAATTAGAGC
chr8	358059	358060	chr8:358060:G:A	rs58613618	G	A	.	Hoxd3_MA0912.1	14	1	-	9.525545669098099	8.961209222965808	TTGGACTAATGACTCT
chr8	389667	389668	chr8:389668:G:A	rs4998446	G	A	.	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr8	639065	639066	chr8:639066:G:A	rs62486208	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	655347	655348	chr8:655348:C:T	rs112496502	C	T	C	Hoxd3_MA0912.1	3	1	-	8.443845888375867	8.55794363941489	CAGGCTTAATTACTAT
chr8	655360	655361	chr8:655361:T:C	rs113381654	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	699377	699378	chr8:699378:C:G	rs12156415	C	G	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	781634	781635	chr8:781635:G:A	rs73181016	G	A	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	912187	912188	chr8:912188:G:C	rs4735828	G	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	1153476	1153477	chr8:1153477:C:G	rs62487484	C	G	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	1178097	1178098	chr8:1178098:C:T	rs7838460	C	T	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	1178100	1178101	chr8:1178101:A:C	rs57340108	A	C	A	Hoxd3_MA0912.1	13	1	-	10.265803233913381	9.291962051712673	CTGGGGTAATGACTCT
chr8	1178109	1178110	chr8:1178110:C:G	rs10109717	C	G	C	Hoxd3_MA0912.1	4	1	-	10.265803233913381	8.687725323200299	CTGGGGTAATGACTCT
chr8	1178132	1178133	chr8:1178133:G:C	rs10108927	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	1214909	1214910	chr8:1214910:T:G	rs11996586	T	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	1214916	1214917	chr8:1214917:C:G	rs34086587	C	G	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	1261769	1261770	chr8:1261770:T:A	rs565779807	T	A	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr8	1262114	1262115	chr8:1262115:G:T	rs10866922	G	T	T	Hoxd3_MA0912.1	15	1	-	10.06676277782019	9.179459582819288	CTGGGCTAATTATTCC
chr8	1268037	1268038	chr8:1268038:A:G	rs76457059	A	G	A	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	1302003	1302004	chr8:1302004:A:G	rs17754335	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	1455115	1455116	chr8:1455116:T:C	rs740244	T	C	C	Hoxd3_MA0912.1	11	1	-	8.96310957057847	7.177183622397477	ATGAGCTCATTACATT
chr8	1652806	1652807	chr8:1652807:C:A	rs17755991	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr8	1652807	1652808	chr8:1652808:G:A	rs71518082	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	1770127	1770128	chr8:1770128:T:A	rs111520013	T	A	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	2045321	2045322	chr8:2045322:G:A	rs17751010	G	A	G	Hoxd3_MA0912.1	14	1	-	8.548918126596778	7.984581680464489	CAGAACTAATTGCTCT
chr8	2093638	2093639	chr8:2093639:G:A	rs4559266	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	2163105	2163106	chr8:2163106:A:C	rs17685326	A	C	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	2230899	2230900	chr8:2230900:G:A	rs77215738	G	A	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr8	2230927	2230928	chr8:2230928:A:G	rs10107849	A	G	G	Hoxd3_MA0912.1	1	1	-	9.820449779119166	7.736389291583038	TTGTGTTAATGAAAGT
chr8	2556295	2556296	chr8:2556296:G:C	rs3912358	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	2666711	2666712	chr8:2666712:T:G	chr8:2666712:T:G	T	G	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	2979187	2979188	chr8:2979188:C:G	rs687026	C	G	G	Hoxd3_MA0912.1	1	1	+	7.777707079471975	7.777707079471975	ACCAGTTAATTACCCC
chr8	3062740	3062741	chr8:3062741:G:C	rs17317705	G	C	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	3424538	3424539	chr8:3424539:G:A	rs270071	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	3577080	3577081	chr8:3577081:G:C	rs1014048	G	C	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	3848473	3848474	chr8:3848474:G:A	rs2954217	G	A	A	Hoxd3_MA0912.1	4	1	+	8.965743590841482	8.361506862329108	TTCAGTTAATTGATCT
chr8	3938656	3938657	chr8:3938657:G:A	rs115667728	G	A	G	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	3949796	3949797	chr8:3949797:C:G	rs2740867	C	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr8	4029526	4029527	chr8:4029527:G:A	rs72624003	G	A	A	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	4243539	4243540	chr8:4243540:G:A	rs57119424	G	A	G	Hoxd3_MA0912.1	4	1	+	7.064658064363419	6.460421335851045	ATGGGGAAATTACCCC
chr8	4605836	4605837	chr8:4605837:G:A	rs17070773	G	A	G	Hoxd3_MA0912.1	0	1	+	7.654262827971245	8.974710623293547	GTGTTCTAATTGCCGT
chr8	4605856	4605857	chr8:4605857:A:T	rs13264521	A	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	4665878	4665879	chr8:4665879:C:G	rs2724963	C	G	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	4836293	4836294	chr8:4836294:C:T	rs7828120	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	5066665	5066666	chr8:5066666:G:A	rs7824340	G	A	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	5803373	5803374	chr8:5803374:C:T	rs1355664	C	T	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	5874418	5874419	chr8:5874419:A:G	rs7013610	A	G	a	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	6026373	6026374	chr8:6026374:A:T	rs2700751	A	T	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr8	6026391	6026392	chr8:6026392:A:C	rs2700752	A	C	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	6110606	6110607	chr8:6110607:G:A	rs11775110	G	A	G	Hoxd3_MA0912.1	0	1	-	8.141513622268437	8.194019119646368	CCAGGGTAATTACTTT
chr8	6517200	6517201	chr8:6517201:A:G	rs2916724	A	G	A	Hoxd3_MA0912.1	9	1	-	8.307912129461718	1.4193396698963547	TTGTTGTAATTGGAGT
chr8	6560874	6560875	chr8:6560875:G:T	rs2959769	G	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	6661021	6661022	chr8:6661022:T:G	rs2980647	T	G	T	Hoxd3_MA0912.1	0	1	+	9.153715186330057	7.116833259069018	TGGTTGTAATTAAACT
chr8	6726130	6726131	chr8:6726131:A:G	rs2980685	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr8	6802016	6802017	chr8:6802017:A:C	rs12381538	A	C	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	6879598	6879599	chr8:6879599:G:A	rs5743404	G	A	G	Hoxd3_MA0912.1	5	1	+	7.091531702970402	6.366968326177076	CTGGTGTAATGGCCTG
chr8	7870800	7870801	chr8:7870801:A:G	rs2698845	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr8	8262193	8262194	chr8:8262194:A:G	rs712255	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr8	8284471	8284472	chr8:8284472:G:C	rs74808779	G	C	G	Hoxd3_MA0912.1	5	1	+	7.837183742264351	7.648657408583514	GTGTGGTAATTAGTGG
chr8	8333272	8333273	chr8:8333273:T:C	rs2980496	T	C	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr8	8417341	8417342	chr8:8417342:A:T	rs138565681	A	T	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr8	8503743	8503744	chr8:8503744:A:G	rs2980754	A	G	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	8553856	8553857	chr8:8553857:T:C	rs7002609	T	C	C	Hoxd3_MA0912.1	6	1	+	9.166858264570719	7.380932316389726	CTGTGATAATTAAAAC
chr8	8611300	8611301	chr8:8611301:G:A	rs17154375	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	8660293	8660294	chr8:8660294:G:A	rs28658240	G	A	A	Hoxd3_MA0912.1	14	1	+	8.745602976051378	7.801637646287245	TTGACATAATTGACGT
chr8	8680690	8680691	chr8:8680691:G:A	rs11787172	G	A	g	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	8744316	8744317	chr8:8744317:T:C	rs7841391	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	8804527	8804528	chr8:8804528:T:C	rs78232580	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	8866904	8866905	chr8:8866905:C:T	rs60707155	C	T	C	Hoxd3_MA0912.1	14	1	+	8.256628240610093	7.692291794477802	CTTGCATAATTAGCCT
chr8	8904770	8904771	chr8:8904771:A:G	rs28407621	A	G	G	Hoxd3_MA0912.1	1	1	-	7.506801038854704	5.422740551318573	CTGCTGTAATTAGGGG
chr8	8910649	8910650	chr8:8910650:G:T	rs433724	G	T	T	Hoxd3_MA0912.1	13	1	-	8.347824239280653	7.743587510768281	CTGAATTCATTATCGC
chr8	8925747	8925748	chr8:8925748:A:G	rs141150420	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTACCTC
chr8	9229653	9229654	chr8:9229654:T:A	rs73199639	T	A	T	Hoxd3_MA0912.1	0	1	+	9.553862224907427	8.83742809296869	TAAAGGTAATTAATGT
chr8	9317922	9317923	chr8:9317923:C:T	rs13279173	C	T	.	Hoxd3_MA0912.1	21	0	-	0	0	.
chr8	9479596	9479597	chr8:9479597:G:C	rs4840417	G	C	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	9546273	9546274	chr8:9546274:C:T	rs55797444	C	T	C	Hoxd3_MA0912.1	4	1	-	7.934631512686383	7.330394784174008	GTGAGTCAATTAAACC
chr8	9568187	9568188	chr8:9568188:A:C	rs10088969	A	C	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	9793940	9793941	chr8:9793941:C:T	rs149484433	C	T	C	Hoxd3_MA0912.1	4	1	-	7.709310820716334	7.105074092203962	TGTGGGTAATTGACCT
chr8	10262118	10262119	chr8:10262119:A:C	rs4570161	A	C	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr8	10287872	10287873	chr8:10287873:A:C	rs78213044	A	C	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr8	10535743	10535744	chr8:10535744:A:G	rs12549246	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr8	10539134	10539135	chr8:10539135:G:A	rs73662855	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	10539181	10539182	chr8:10539182:C:G	rs1050088560	C	G	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	10655215	10655216	chr8:10655216:G:A	rs59375115	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	10789418	10789419	chr8:10789419:C:T	rs552736993	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	10827159	10827160	chr8:10827160:C:T	rs7846449	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	11019747	11019748	chr8:11019748:C:A	rs35315747	C	A	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	11049223	11049224	chr8:11049224:G:A	rs62490742	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr8	11049229	11049230	chr8:11049230:C:T	rs62490743	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	11125468	11125469	chr8:11125469:C:G	rs76469923	C	G	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr8	11159378	11159379	chr8:11159379:A:G	rs2409719	A	G	A	Hoxd3_MA0912.1	0	1	-	8.479724453436058	8.427218956058127	TTGTGGTCATTACTTG
chr8	11461704	11461705	chr8:11461705:T:A	rs117781944	T	A	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	11471064	11471065	chr8:11471065:G:A	rs145434983	G	A	G	Hoxd3_MA0912.1	13	1	-	8.967975957887473	8.3637392293751	CTCTGTTAATTATCTT
chr8	11498769	11498770	chr8:11498770:T:C	rs185394289	T	C	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr8	11504921	11504922	chr8:11504922:G:C	rs111965253	G	C	G	Hoxd3_MA0912.1	0	1	-	7.380729130256682	5.396352700373573	CTGTATCCATTACCCC
chr8	11630533	11630534	chr8:11630534:C:T	rs74630789	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	11651437	11651438	chr8:11651438:G:A	rs190851260	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	11679143	11679144	chr8:11679144:G:A	rs189737931	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	11713417	11713418	chr8:11713418:G:A	rs191225754	G	A	G	Hoxd3_MA0912.1	6	1	-	9.15997111678869	10.945897064969685	CTGGGGCAATTACCAC
chr8	11774462	11774463	chr8:11774463:G:C	rs187228618	G	C	g	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	11922824	11922825	chr8:11922825:C:T	rs114210295	C	T	T	Hoxd3_MA0912.1	14	1	+	7.830598134545928	7.266261688413638	CTGTGCCAATTATTCC
chr8	11954944	11954945	chr8:11954945:T:C	rs13267552	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	12387884	12387885	chr8:12387885:G:C	rs143908580	G	C	-	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	12596344	12596345	chr8:12596345:C:T	rs368426232	C	T	.	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	12774816	12774817	chr8:12774817:G:A	rs7463211	G	A	g	Hoxd3_MA0912.1	21	0	-	0	0	.
chr8	12832667	12832668	chr8:12832668:A:T	rs13274899	A	T	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr8	13080343	13080344	chr8:13080344:G:C	rs35208966	G	C	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	13080363	13080364	chr8:13080364:A:G	rs57889625	A	G	A	Hoxd3_MA0912.1	2	1	+	9.113435646681653	10.563270690838692	CAAAGGTAATTACTTT
chr8	13080919	13080920	chr8:13080920:T:C	rs709825	T	C	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	13157102	13157103	chr8:13157103:A:C	rs4831888	A	C	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	13248865	13248866	chr8:13248866:T:C	rs7834975	T	C	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	13302784	13302785	chr8:13302785:C:T	rs12546798	C	T	C	Hoxd3_MA0912.1	1	1	-	7.524713090381637	8.382537363755828	CGGGGTTAATTGAGCT
chr8	13312923	13312924	chr8:13312924:C:G	rs6985924	C	G	G	Hoxd3_MA0912.1	12	1	-	7.9957698294154085	8.963292060354437	TTGAGTCAATTGGTCT
chr8	13378045	13378046	chr8:13378046:C:T	rs6530629	C	T	T	Hoxd3_MA0912.1	2	1	-	9.254363662109274	7.804528617952235	CAGTGCTAATTAAAAT
chr8	13408027	13408028	chr8:13408028:A:G	rs2291211	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	13408042	13408043	chr8:13408043:C:T	rs2291210	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	13491849	13491850	chr8:13491850:A:G	rs11775251	A	G	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	13591356	13591357	chr8:13591357:A:C	rs7840620	A	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	13780697	13780698	chr8:13780698:T:G	rs1384048	T	G	G	Hoxd3_MA0912.1	12	1	-	8.662663005727591	8.662663005727591	CTGCAGCAATTAATCT
chr8	13871913	13871914	chr8:13871914:C:G	rs6988659	C	G	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	14034275	14034276	chr8:14034276:T:A	rs12542704	T	A	T	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	14818155	14818156	chr8:14818156:T:C	rs11779930	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	15044356	15044357	chr8:15044357:G:T	rs73522803	G	T	G	Hoxd3_MA0912.1	12	1	+	9.519481890937934	9.2802522018721	TTGGGTTCATTAGCTT
chr8	15422749	15422750	chr8:15422750:G:C	rs7843321	G	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	15537969	15537970	chr8:15537970:G:A	rs7830920	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	15682853	15682854	chr8:15682854:A:T	rs2098507	A	T	A	Hoxd3_MA0912.1	8	1	+	8.526029021477743	4.035351834710753	TTGTGGTAATGAATTC
chr8	15851691	15851692	chr8:15851692:A:G	rs62501482	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	15938050	15938051	chr8:15938051:A:C	rs35422228	A	C	A	Hoxd3_MA0912.1	10	1	-	7.7187745820567315	5.744832215876212	TTGAGGAAATTACCGC
chr8	16122288	16122289	chr8:16122289:C:G	rs12676334	C	G	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	16200029	16200030	chr8:16200030:C:T	rs59251421	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	16284715	16284716	chr8:16284716:A:G	rs4316153	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	16755746	16755747	chr8:16755747:T:G	rs654785	T	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr8	16912820	16912821	chr8:16912821:T:A	rs115009942	T	A	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	17167923	17167924	chr8:17167924:G:T	rs1034557	G	T	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	17374057	17374058	chr8:17374058:C:G	rs67664103	C	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	17379960	17379961	chr8:17379961:A:C	rs10088936	A	C	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	17382928	17382929	chr8:17382929:C:T	rs6587039	C	T	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr8	17433118	17433119	chr8:17433119:T:C	rs7387693	T	C	C	Hoxd3_MA0912.1	0	1	-	9.165972227016509	7.845524431694205	ATTAGGTAATTATACT
chr8	17529925	17529926	chr8:17529926:T:C	rs2517243	T	C	T	Hoxd3_MA0912.1	9	1	+	8.561029094993168	1.6724566354278063	CAGAAGTAATTGCTGT
chr8	17615179	17615180	chr8:17615180:A:G	rs3780105	A	G	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	17619334	17619335	chr8:17619335:A:G	rs2237832	A	G	A	Hoxd3_MA0912.1	11	1	+	10.188527047505904	8.40260109932491	TAGAATTAATTACCAT
chr8	17754533	17754534	chr8:17754534:G:A	rs61733694	G	A	G	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	17768432	17768433	chr8:17768433:C:G	rs7006669	C	G	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	17771094	17771095	chr8:17771095:C:T	rs62498366	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	17909169	17909170	chr8:17909170:A:G	rs114893518	A	G	A	Hoxd3_MA0912.1	11	1	+	10.280130900275907	8.494204952094913	CTGGACTAATTATCTT
chr8	17912844	17912845	chr8:17912845:T:C	rs78246630	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	17912866	17912867	chr8:17912867:T:C	rs7009476	T	C	T	Hoxd3_MA0912.1	10	1	+	8.39637151754688	1.6166882749164526	TTTGTCTAATTGCTCT
chr8	17923805	17923806	chr8:17923806:C:G	rs80062473	C	G	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr8	18178036	18178037	chr8:18178037:T:A	rs7835928	T	A	T	Hoxd3_MA0912.1	10	1	+	9.185654288839727	2.4059710462092987	ATGGTGCAATTAATCT
chr8	18178044	18178045	chr8:18178045:C:T	rs7814365	C	T	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	18320626	18320627	chr8:18320627:G:A	rs117688508	G	A	G	Hoxd3_MA0912.1	13	1	-	11.164892515537943	10.560655787025569	CTGATCTAATTACCGG
chr8	18610008	18610009	chr8:18610009:C:A	rs13248882	C	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	18770264	18770265	chr8:18770265:G:A	rs12155629	G	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr8	19011259	19011260	chr8:19011260:A:G	rs117839861	A	G	A	Hoxd3_MA0912.1	15	1	-	8.292435716116184	7.514731147528177	ATAGGTTAATTGCAGT
chr8	19134772	19134773	chr8:19134773:T:C	rs73593609	T	C	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	19134779	19134780	chr8:19134780:C:A	rs114726056	C	A	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	19135964	19135965	chr8:19135965:C:A	rs374739122	C	A	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	19278393	19278394	chr8:19278394:C:T	rs79145632	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	19414753	19414754	chr8:19414754:T:C	rs6992950	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr8	19511778	19511779	chr8:19511779:T:C	rs9644629	T	C	T	Hoxd3_MA0912.1	7	1	-	7.934631512686383	1.1549482700559546	GTGAGTCAATTAAACC
chr8	19514409	19514410	chr8:19514410:T:A	rs11780905	T	A	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	19813466	19813467	chr8:19813467:A:G	rs117858873	A	G	A	Hoxd3_MA0912.1	0	1	-	9.753462369477708	9.700956872099777	TTGGGCTAATTGAATT
chr8	20074576	20074577	chr8:20074577:T:C	rs11985911	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	20074638	20074639	chr8:20074639:A:C	rs1487890475	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr8	20268390	20268391	chr8:20268391:G:A	rs115192126	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	20378509	20378510	chr8:20378510:C:T	rs80261486	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr8	20412108	20412109	chr8:20412109:C:G	rs35673104	C	G	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr8	20562157	20562158	chr8:20562158:C:T	rs2898512	C	T	C	Hoxd3_MA0912.1	15	1	-	8.100921688588576	7.25992306162936	ATGAGCTCATTATCCG
chr8	20883334	20883335	chr8:20883335:A:T	rs4961418	A	T	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	20941324	20941325	chr8:20941325:G:A	rs58050368	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	21028483	21028484	chr8:21028484:G:A	rs17577994	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	21041697	21041698	chr8:21041698:G:A	rs62497299	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr8	21059524	21059525	chr8:21059525:C:T	rs111970678	C	T	C	Hoxd3_MA0912.1	13	1	-	8.748441686062638	9.722282868263346	ATGGGCTAATTACGCA
chr8	21068287	21068288	chr8:21068288:C:T	rs556446288	C	T	C	Hoxd3_MA0912.1	12	1	+	10.956513804353815	9.74976188434895	TTAAGGTAATTACTCT
chr8	21068289	21068290	chr8:21068290:C:T	rs13275050	C	T	C	Hoxd3_MA0912.1	14	1	+	10.956513804353815	10.392177358221524	TTAAGGTAATTACTCT
chr8	21281282	21281283	chr8:21281283:A:G	rs73668183	A	G	A	Hoxd3_MA0912.1	1	1	-	7.908676247941416	5.824615760405286	TTGAGGTCATTGCCTC
chr8	21308831	21308832	chr8:21308832:A:T	rs62498904	A	T	A	Hoxd3_MA0912.1	5	1	-	8.534753726977456	7.681395241978562	CTGAATTCATGAACCT
chr8	21364640	21364641	chr8:21364641:A:G	rs6586982	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	21429768	21429769	chr8:21429769:G:T	rs13278682	G	T	G	Hoxd3_MA0912.1	7	1	-	8.741436814848488	10.715379181029007	TTGGACTCATTAACTG
chr8	21534452	21534453	chr8:21534453:C:T	rs1600687	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr8	21550281	21550282	chr8:21550282:T:C	rs13261954	T	C	T	Hoxd3_MA0912.1	8	1	-	8.690742861876394	1.8021704023110328	ATGATTCAATTACCTC
chr8	21625741	21625742	chr8:21625742:A:C	rs13270674	A	C	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr8	21625756	21625757	chr8:21625757:A:G	rs117348664	A	G	A	Hoxd3_MA0912.1	12	1	+	8.00544237042594	7.037920139486909	CAAGGCTCATTAACCT
chr8	21884795	21884796	chr8:21884796:T:C	rs67083652	T	C	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	22001572	22001573	chr8:22001573:G:A	rs6988010	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	22196264	22196265	chr8:22196265:G:A	rs79619458	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	22987047	22987048	chr8:22987048:T:G	rs940996043	T	G	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr8	23171469	23171470	chr8:23171470:C:T	rs138693175	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	23247339	23247340	chr8:23247340:G:A	rs12678664	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr8	23247353	23247354	chr8:23247354:A:G	rs6981431	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	23344311	23344312	chr8:23344312:C:T	rs17767946	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	23368231	23368232	chr8:23368232:C:T	rs2294133	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	23383515	23383516	chr8:23383516:C:T	rs73226407	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr8	23449402	23449403	chr8:23449403:T:C	rs28546748	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr8	23484030	23484031	chr8:23484031:G:A	rs79103878	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	23654386	23654387	chr8:23654387:C:G	rs7832150	C	G	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr8	23753242	23753243	chr8:23753243:C:T	rs310289	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	23753285	23753286	chr8:23753286:T:G	rs1561105	T	G	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr8	23829656	23829657	chr8:23829657:G:A	rs192843	G	A	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	23829670	23829671	chr8:23829671:T:C	rs10481334	T	C	G	Hoxd3_MA0912.1	5	1	-	7.764631788858631	8.489195165651957	CTGCTATAATTGCCCC
chr8	23829684	23829685	chr8:23829685:G:A	rs11787248	G	A	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr8	24229393	24229394	chr8:24229394:A:G	rs139268410	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	24296644	24296645	chr8:24296645:T:C	rs62502709	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr8	24357421	24357422	chr8:24357422:C:A	rs892587	C	A	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	24395158	24395159	chr8:24395159:A:G	rs138142409	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	25121617	25121618	chr8:25121618:C:A	rs7826757	C	A	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	25777265	25777266	chr8:25777266:C:T	rs4872353	C	T	T	Hoxd3_MA0912.1	15	1	-	8.198792339997206	7.3577937130379905	CTGTTCTCATTAATCG
chr8	25924484	25924485	chr8:25924485:G:A	rs6557870	G	A	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	26034489	26034490	chr8:26034490:A:T	rs79594640	A	T	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	26046971	26046972	chr8:26046972:G:T	rs1008974	G	T	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	26048045	26048046	chr8:26048046:T:C	rs78278087	T	C	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	26065394	26065395	chr8:26065395:A:C	rs7836754	A	C	C	Hoxd3_MA0912.1	1	1	-	8.935705759148988	6.851645271612858	TTGTGGCAATTACTAT
chr8	26078119	26078120	chr8:26078120:G:A	rs11135916	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr8	26285238	26285239	chr8:26285239:G:A	rs78724200	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	26423168	26423169	chr8:26423169:C:T	rs35892365	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	26578784	26578785	chr8:26578785:G:A	rs145177339	G	A	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	26595951	26595952	chr8:26595952:G:T	rs11990271	G	T	G	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	26596799	26596800	chr8:26596800:C:T	rs17055492	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	26638638	26638639	chr8:26638639:A:T	rs752735511	A	T	A	Hoxd3_MA0912.1	27	0	-	0	0	.
chr8	26638679	26638680	chr8:26638680:C:A	rs1442336	C	A	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr8	26663117	26663118	chr8:26663118:C:T	rs6557935	C	T	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr8	26695626	26695627	chr8:26695627:A:C	rs73679979	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr8	27031805	27031806	chr8:27031806:C:T	rs192461536	C	T	c	Hoxd3_MA0912.1	14	1	-	7.327306870157816	6.383341540393682	GTGGGGTAATGAATGC
chr8	27040376	27040377	chr8:27040377:C:T	rs13263797	C	T	c	Hoxd3_MA0912.1	4	1	-	10.179342137916521	9.575105409404147	TTGGGATAATTAAATG
chr8	27274418	27274419	chr8:27274419:A:C	rs140103307	A	C	A	Hoxd3_MA0912.1	7	1	+	9.854669324407823	7.880726958227306	AAGAGTTAATTAACTC
chr8	27313270	27313271	chr8:27313271:G:A	rs113814152	G	A	g	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr8	27584747	27584748	chr8:27584748:C:T	rs66620285	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	27596011	27596012	chr8:27596012:G:A	chr8:27596012:G:A	G	A	G	Hoxd3_MA0912.1	12	1	-	8.9757578008897	7.769005880884836	TTGGGCCAATTACTTC
chr8	27629652	27629653	chr8:27629653:C:T	rs113727051	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	27827821	27827822	chr8:27827822:A:G	rs111966103	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr8	27829228	27829229	chr8:27829229:T:C	rs74494270	T	C	.	Hoxd3_MA0912.1	8	1	-	8.08163417233574	1.1930617127703758	TTGAGCCAATTGCTTT
chr8	27909653	27909654	chr8:27909654:G:A	rs2726991	G	A	G	Hoxd3_MA0912.1	13	1	-	7.808645127083102	7.2044083985707275	TCGAGGTAATGAGCGT
chr8	27966314	27966315	chr8:27966315:G:A	rs11780263	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr8	27966350	27966351	chr8:27966351:G:A	rs2726940	G	A	G	Hoxd3_MA0912.1	27	0	+	0	0	.
chr8	28118507	28118508	chr8:28118508:A:G	rs34545774	A	G	A	Hoxd3_MA0912.1	1	1	-	9.593679359596875	7.509618872060745	TTGATTTAATGAGCCT
chr8	28230373	28230374	chr8:28230374:T:C	rs12681090	T	C	T	Hoxd3_MA0912.1	9	1	+	8.865589263994496	1.9770168044291325	CAGGGCTAATTGACCC
chr8	28272820	28272821	chr8:28272821:G:A	rs537542496	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	28434934	28434935	chr8:28434935:G:T	rs6558058	G	T	g	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	28445247	28445248	chr8:28445248:T:G	rs1060411	T	G	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	28445269	28445270	chr8:28445270:G:C	rs1060409	G	C	C	Hoxd3_MA0912.1	14	1	-	9.165259095329334	8.988843730044886	TTGCGCTAATTAAGCC
chr8	28445280	28445281	chr8:28445281:G:A	rs1978678	G	A	A	Hoxd3_MA0912.1	3	1	-	9.165259095329334	9.901940317909007	TTGCGCTAATTAAGCC
chr8	28479526	28479527	chr8:28479527:A:G	rs6993584	A	G	G	Hoxd3_MA0912.1	1	1	-	8.985833478994403	6.901772991458273	ATGCGTTAATTAGATT
chr8	28709159	28709160	chr8:28709160:A:G	rs2299563	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	29200643	29200644	chr8:29200644:T:G	rs28699286	T	G	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	29262031	29262032	chr8:29262032:A:G	rs188028631	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	29353714	29353715	chr8:29353715:C:G	rs543399225	C	G	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr8	29477642	29477643	chr8:29477643:T:C	rs58703445	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	29519727	29519728	chr8:29519728:C:G	rs4587365	C	G	G	Hoxd3_MA0912.1	13	1	+	9.440820895487324	7.86274298477424	TTGATTTCATTACCAT
chr8	29530559	29530560	chr8:29530560:T:G	chr8:29530560:T:G	T	G	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	29596740	29596741	chr8:29596741:T:C	rs6558125	T	C	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	29596747	29596748	chr8:29596748:A:G	rs6558126	A	G	a	Hoxd3_MA0912.1	10	1	-	7.431607520889864	0.6519242782594372	CTGACCTCATTGCCCT
chr8	29977390	29977391	chr8:29977391:G:A	rs73567880	G	A	A	Hoxd3_MA0912.1	14	1	+	10.811985641644286	9.868020311880153	GTGGGTTAATTAACGT
chr8	30137269	30137270	chr8:30137270:A:G	rs188534729	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr8	30137273	30137274	chr8:30137274:G:A	rs74960438	G	A	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	30155795	30155796	chr8:30155796:G:C	rs547779705	G	C	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	30164997	30164998	chr8:30164998:A:G	rs116075360	A	G	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr8	30436162	30436163	chr8:30436163:A:G	rs12542878	A	G	A	Hoxd3_MA0912.1	1	1	-	9.77566425644003	7.691603768903899	CTGATGTCATTACTCT
chr8	30586717	30586718	chr8:30586718:G:A	rs2978286	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr8	30717891	30717892	chr8:30717892:G:A	rs149571864	G	A	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	31875282	31875283	chr8:31875283:T:A	rs75717051	T	A	t	Hoxd3_MA0912.1	0	1	+	9.440820895487324	8.724386763548587	TTGAGTTCATTAATAT
chr8	32270289	32270290	chr8:32270290:G:A	rs116913321	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr8	32678638	32678639	chr8:32678639:A:C	rs978789482	A	C	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	33203893	33203894	chr8:33203894:A:G	rs10092532	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr8	33413268	33413269	chr8:33413269:C:T	rs55883200	C	T	C	Hoxd3_MA0912.1	12	1	+	7.742029984211079	6.535278064206215	ATGAGGTCATGACACT
chr8	33770823	33770824	chr8:33770824:G:C	rs16881213	G	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	33943925	33943926	chr8:33943926:G:A	rs187396446	G	A	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	34114622	34114623	chr8:34114623:A:G	rs12676472	A	G	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	34507747	34507748	chr8:34507748:C:T	rs56249164	C	T	c	Hoxd3_MA0912.1	15	1	-	6.790907956968863	5.949909330009647	CTGAGCTCATGATCCG
chr8	34531308	34531309	chr8:34531309:T:A	rs12680034	T	A	A	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr8	34657054	34657055	chr8:34657055:A:T	rs7004471	A	T	T	Hoxd3_MA0912.1	0	1	-	10.339744456997229	9.623310325058494	TTGAAATAATTAACTC
chr8	35017368	35017369	chr8:35017369:G:A	rs12550464	G	A	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr8	35123057	35123058	chr8:35123058:T:G	rs2122812	T	G	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	35123079	35123080	chr8:35123080:A:G	rs2167362	A	G	G	Hoxd3_MA0912.1	15	1	+	9.137220618673295	9.978219245632511	CTTGGATAATTACCCA
chr8	35209600	35209601	chr8:35209601:G:A	rs6997817	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	35571554	35571555	chr8:35571555:G:A	rs2589338	G	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	35633954	35633955	chr8:35633955:G:A	rs191187256	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr8	36345318	36345319	chr8:36345319:A:C	rs564914784	A	C	A	Hoxd3_MA0912.1	13	1	+	9.424949318386814	10.029186046899188	ATGGGCTAATTGCAGT
chr8	36573912	36573913	chr8:36573913:G:A	rs935984467	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	36573929	36573930	chr8:36573930:T:G	chr8:36573930:T:G	T	G	T	Hoxd3_MA0912.1	11	1	-	9.62501737457783	2.8803812051655	AAGGTATAATTACCCT
chr8	36884040	36884041	chr8:36884041:C:T	rs10099214	C	T	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	37020778	37020779	chr8:37020779:C:T	rs146795588	C	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr8	37180144	37180145	chr8:37180145:G:A	rs73591184	G	A	G	Hoxd3_MA0912.1	5	1	+	10.563270690838692	9.838707314045369	CAGAAGTAATTACCTT
chr8	37253448	37253449	chr8:37253449:A:G	rs73673149	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr8	37298985	37298986	chr8:37298986:C:G	rs107866	C	G	G	Hoxd3_MA0912.1	14	1	-	9.787265309155107	9.963680674439555	CTGATGTAATTGCTGT
chr8	37503235	37503236	chr8:37503236:C:A	rs55968252	C	A	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	37610207	37610208	chr8:37610208:C:T	rs141597715	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	37789734	37789735	chr8:37789735:G:C	rs56359660	G	C	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr8	38363949	38363950	chr8:38363950:T:G	rs11777811	T	G	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	38465873	38465874	chr8:38465874:T:A	rs377593474	T	A	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	38901234	38901235	chr8:38901235:A:T	chr8:38901235:A:T	A	T	a	Hoxd3_MA0912.1	22	0	-	0	0	.
chr8	38920742	38920743	chr8:38920743:G:A	rs73615951	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	39007311	39007312	chr8:39007312:A:G	rs79182945	A	G	a	Hoxd3_MA0912.1	9	1	-	8.35596741782587	1.4673949582605075	TTGGGGTCATTGAAGT
chr8	39007340	39007341	chr8:39007341:C:T	rs13282047	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	40008540	40008541	chr8:40008541:T:C	rs57956052	T	C	t	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr8	40011794	40011795	chr8:40011795:A:T	rs2001493	A	T	A	Hoxd3_MA0912.1	2	1	-	9.795742252119604	9.66309777751331	CTTAGTTCATTAACCT
chr8	40041220	40041221	chr8:40041221:G:A	rs1481062	G	A	G	Hoxd3_MA0912.1	6	1	-	6.070244802382492	7.856170750563484	CTGTGGCCATTGCCCC
chr8	40196195	40196196	chr8:40196196:C:G	rs188221448	C	G	C	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr8	40370973	40370974	chr8:40370974:T:C	chr8:40370974:T:C	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr8	40379949	40379950	chr8:40379950:G:A	rs2072690	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	40443092	40443093	chr8:40443093:T:C	rs12676603	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	40514943	40514944	chr8:40514944:A:C	rs1429956	A	C	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr8	40514985	40514986	chr8:40514986:C:A	rs1429957	C	A	C	Hoxd3_MA0912.1	11	1	-	9.839770806533037	7.288005693619992	TTGAAGTAATTGCTGT
chr8	41002483	41002484	chr8:41002484:T:C	rs11995673	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	41425484	41425485	chr8:41425485:C:T	rs67006503	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	41476800	41476801	chr8:41476801:C:A	rs7813789	C	A	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr8	41772155	41772156	chr8:41772156:C:T	rs13258053	C	T	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr8	41816410	41816411	chr8:41816411:T:A	rs2010743	T	A	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	41858844	41858845	chr8:41858845:C:G	rs10504047	C	G	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	41971700	41971701	chr8:41971701:T:C	chr8:41971701:T:C	T	C	T	Hoxd3_MA0912.1	6	1	+	8.95320871602062	7.167282767839627	CAAAAATAATTACCCT
chr8	42050658	42050659	chr8:42050659:G:A	rs80326864	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	42549593	42549594	chr8:42549594:G:A	rs13250124	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	42774241	42774242	chr8:42774242:C:A	rs74572794	C	A	C	Hoxd3_MA0912.1	12	1	-	9.167305364573224	8.92807567550739	CTCTATTAATTAGCCT
chr8	42811064	42811065	chr8:42811065:G:A	rs7017215	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	47498842	47498843	chr8:47498843:T:C	rs60256648	T	C	T	Hoxd3_MA0912.1	15	1	+	8.296285082516908	7.5185805139288995	ATTGAGTAATTGCCGT
chr8	47736047	47736048	chr8:47736048:C:G	rs149306870	C	G	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	48584163	48584164	chr8:48584164:G:A	rs1350167167	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	49862012	49862013	chr8:49862013:C:T	rs9298227	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr8	50139474	50139475	chr8:50139475:C:A	rs6988843	C	A	A	Hoxd3_MA0912.1	1	1	+	7.517814111816445	8.375638385190635	ACGGTGTCATTAACCT
chr8	50643382	50643383	chr8:50643383:G:C	rs11991963	G	C	G	Hoxd3_MA0912.1	14	1	+	7.400250980825593	7.57666634611004	TCAGGGTAATTGCCGT
chr8	51198929	51198930	chr8:51198930:A:G	rs58475991	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	51240422	51240423	chr8:51240423:C:T	rs2893637	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	51399645	51399646	chr8:51399646:G:A	rs73579673	G	A	G	Hoxd3_MA0912.1	15	1	-	8.31329659343878	9.091001162026789	CTGTAATCATTACCCC
chr8	51456088	51456089	chr8:51456089:T:A	rs10112102	T	A	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr8	51858999	51859000	chr8:51859000:T:C	rs4873206	T	C	C	Hoxd3_MA0912.1	6	1	+	7.962543709856334	6.176617761675342	CTAAGGTAATGAGTCT
chr8	52097045	52097046	chr8:52097046:A:C	rs3849810	A	C	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	52631484	52631485	chr8:52631485:G:A	rs118111473	G	A	G	Hoxd3_MA0912.1	2	1	+	10.57587590583654	9.1260408616795	TAGAAGTAATTAAACT
chr8	52790939	52790940	chr8:52790940:T:C	rs896632	T	C	C	Hoxd3_MA0912.1	4	1	-	8.474646587728065	9.07888331624044	CTGCAGTCATTAAACT
chr8	52948663	52948664	chr8:52948664:T:C	rs684070	T	C	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr8	53146080	53146081	chr8:53146081:G:A	rs1160463	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	53495524	53495525	chr8:53495525:A:G	rs10097151	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	53544092	53544093	chr8:53544093:A:G	rs2199589	A	G	A	Hoxd3_MA0912.1	9	1	-	10.159880133862533	3.2713076742971707	TTTTGCTAATTAATGT
chr8	53544099	53544100	chr8:53544100:A:G	rs9693381	A	G	A	Hoxd3_MA0912.1	2	1	-	10.159880133862533	9.693596285719329	TTTTGCTAATTAATGT
chr8	53585517	53585518	chr8:53585518:T:G	rs13268670	T	G	T	Hoxd3_MA0912.1	1	1	+	9.177459049084026	7.093398561547895	TTGATTCAATTAGTCT
chr8	53940082	53940083	chr8:53940083:C:G	rs3816772	C	G	C	Hoxd3_MA0912.1	34	0	+	0	0	.
chr8	54101130	54101131	chr8:54101131:C:T	rs77029186	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr8	54150876	54150877	chr8:54150877:C:T	rs16919782	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	54222096	54222097	chr8:54222097:G:C	rs312115	G	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr8	54328228	54328229	chr8:54328229:T:C	rs76941377	T	C	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	54467788	54467789	chr8:54467789:T:C	rs551382520	T	C	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	54971675	54971676	chr8:54971676:C:G	rs11780917	C	G	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	55591863	55591864	chr8:55591864:C:T	rs73597159	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	55810165	55810166	chr8:55810166:A:G	rs62515257	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	55836550	55836551	chr8:55836551:T:A	rs6474023	T	A	T	Hoxd3_MA0912.1	1	1	+	8.679128771342533	7.452892557180594	CTTTACTAATTAATGG
chr8	55843508	55843509	chr8:55843509:G:C	rs114505662	G	C	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	55864403	55864404	chr8:55864404:T:C	rs16922295	T	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	55880933	55880934	chr8:55880934:T:C	rs6474026	T	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	55948405	55948406	chr8:55948406:C:T	rs16922462	C	T	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	56040427	56040428	chr8:56040428:A:G	rs2667996	A	G	A	Hoxd3_MA0912.1	5	1	-	8.12942039822438	7.812098956337971	TTGGCTTAATTGGCTT
chr8	56502246	56502247	chr8:56502247:A:G	rs970838	A	G	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	56771072	56771073	chr8:56771073:T:C	rs66517724	T	C	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	56845591	56845592	chr8:56845592:C:A	rs9694800	C	A	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr8	56872428	56872429	chr8:56872429:A:G	rs2873555	A	G	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	56911969	56911970	chr8:56911970:T:C	rs115235274	T	C	T	Hoxd3_MA0912.1	6	1	+	9.639149173535664	7.853223225354673	CTGTGGTAATGAAAGT
chr8	56911974	56911975	chr8:56911975:A:T	rs532679249	A	T	A	Hoxd3_MA0912.1	11	1	+	9.639149173535664	5.301458112441624	CTGTGGTAATGAAAGT
chr8	56911977	56911978	chr8:56911978:G:A	rs115898959	G	A	G	Hoxd3_MA0912.1	14	1	+	9.639149173535664	8.695183843771531	CTGTGGTAATGAAAGT
chr8	57106585	57106586	chr8:57106586:C:T	rs6995826	C	T	.	Hoxd3_MA0912.1	13	1	+	9.73723268767784	9.132995959165466	ATGTTGTAATTAACTG
chr8	57389057	57389058	chr8:57389058:C:A	rs9694508	C	A	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	57465987	57465988	chr8:57465988:C:A	rs7002828	C	A	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr8	57519309	57519310	chr8:57519310:A:G	rs113044791	A	G	A	Hoxd3_MA0912.1	10	1	-	8.754793503743576	1.9751102611131484	CTGTGGTCATTAACCA
chr8	57798809	57798810	chr8:57798810:C:T	rs13260843	C	T	c	Hoxd3_MA0912.1	14	1	-	10.007782448056087	9.063817118291954	ATTATCTAATTAACGT
chr8	57798810	57798811	chr8:57798811:G:A	rs7838994	G	A	G	Hoxd3_MA0912.1	13	1	-	10.007782448056087	9.403545719543713	ATTATCTAATTAACGT
chr8	58070392	58070393	chr8:58070393:T:C	rs58104827	T	C	T	Hoxd3_MA0912.1	7	1	-	9.916272086533597	3.1365888439031693	CTTAAGTAATTACCAT
chr8	58275240	58275241	chr8:58275241:T:G	rs7821169	T	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	58275282	58275283	chr8:58275283:A:G	rs377268284	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	58292617	58292618	chr8:58292618:A:G	chr8:58292618:A:G	A	G	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr8	58335725	58335726	chr8:58335726:T:C	rs2326011	T	C	T	Hoxd3_MA0912.1	8	1	-	7.974261566480616	1.085689106915253	CTTGCCTAATTGCCCT
chr8	58585630	58585631	chr8:58585631:G:A	rs12677290	G	A	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr8	58660503	58660504	chr8:58660504:C:G	rs73240247	C	G	G	Hoxd3_MA0912.1	12	1	+	9.07185038690684	8.10432815596781	TTGAGATAATTGCTCG
chr8	58699483	58699484	chr8:58699484:G:T	rs78765470	G	T	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	58789471	58789472	chr8:58789472:C:A	rs11781790	C	A	C	Hoxd3_MA0912.1	6	1	+	6.688345918163662	4.136580805250614	CTGGGGCAATGAGTCG
chr8	58789480	58789481	chr8:58789481:G:A	rs11781847	G	A	A	Hoxd3_MA0912.1	15	1	+	6.688345918163662	5.847347291204446	CTGGGGCAATGAGTCG
chr8	58851350	58851351	chr8:58851351:T:C	rs1075418	T	C	T	Hoxd3_MA0912.1	8	1	-	8.34386602016895	1.4552935606035873	CTTGTCCAATTACACT
chr8	59110518	59110519	chr8:59110519:C:T	rs75533088	C	T	C	Hoxd3_MA0912.1	14	1	+	9.20050158651498	8.636165140382689	ATTCGTTAATTAATCT
chr8	59283935	59283936	chr8:59283936:T:G	rs4131421	T	G	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	59351333	59351334	chr8:59351334:A:G	rs953554045	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr8	59368045	59368046	chr8:59368046:G:T	rs7016730	G	T	G	Hoxd3_MA0912.1	15	1	+	8.017219432573414	8.841228569203109	TAGAGCTAATGAATGG
chr8	59869232	59869233	chr8:59869233:T:C	rs56933815	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	59968098	59968099	chr8:59968099:A:C	rs601224	A	C	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	60678222	60678223	chr8:60678223:A:C	chr8:60678223:A:C	A	C	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr8	60901883	60901884	chr8:60901884:G:T	rs17827642	G	T	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr8	60916350	60916351	chr8:60916351:T:A	rs7840653	T	A	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr8	60919887	60919888	chr8:60919888:C:T	rs58187777	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr8	61093851	61093852	chr8:61093852:T:C	rs13259484	T	C	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	61415090	61415091	chr8:61415091:T:C	rs78166828	T	C	T	Hoxd3_MA0912.1	1	1	+	8.662375192758745	6.578314705222613	TTGGCTTAATTATGCT
chr8	62015598	62015599	chr8:62015599:G:A	rs344230	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	62247634	62247635	chr8:62247635:C:T	chr8:62247635:C:T	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr8	63543186	63543187	chr8:63543187:A:G	rs72663888	A	G	A	Hoxd3_MA0912.1	0	1	-	10.036765426783697	9.984259929405766	TTGTGTTAATGACCTT
chr8	64863402	64863403	chr8:64863403:C:A	rs4645595	C	A	C	Hoxd3_MA0912.1	11	1	-	6.73465048620535	4.182885373292301	CTGGGGTCATTGGTCC
chr8	64863405	64863406	chr8:64863406:T:A	rs28437912	T	A	T	Hoxd3_MA0912.1	8	1	-	6.73465048620535	2.2439732994383563	CTGGGGTCATTGGTCC
chr8	65526720	65526721	chr8:65526721:A:G	rs78698310	A	G	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	65562494	65562495	chr8:65562495:T:C	rs6472208	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	66011368	66011369	chr8:66011369:G:A	rs116972997	G	A	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	66133701	66133702	chr8:66133702:G:T	rs10109794	G	T	g	Hoxd3_MA0912.1	14	1	+	8.608027619973534	8.22010653912569	CTCAAGTAATTGACGT
chr8	66513901	66513902	chr8:66513902:G:A	rs17322654	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr8	66924936	66924937	chr8:66924937:C:T	rs73262325	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	66960909	66960910	chr8:66960910:T:C	rs58074823	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	67243502	67243503	chr8:67243503:C:T	rs77699852	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr8	67490643	67490644	chr8:67490644:T:C	rs73262688	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	67508934	67508935	chr8:67508935:G:A	rs1393903	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	67638576	67638577	chr8:67638577:G:T	rs76657914	G	T	T	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr8	67638599	67638600	chr8:67638600:G:A	rs74659108	G	A	A	Hoxd3_MA0912.1	3	1	+	7.499320529087248	7.613418280126272	CTGGAGCAATTGCTTT
chr8	68150092	68150093	chr8:68150093:C:T	rs7825160	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	68515901	68515902	chr8:68515902:G:A	rs7822332	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	68729266	68729267	chr8:68729267:T:A	rs55821789	T	A	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr8	69075553	69075554	chr8:69075554:C:T	rs17694417	C	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	69223996	69223997	chr8:69223997:A:G	rs831715	A	G	g	Hoxd3_MA0912.1	7	1	+	10.08887795294762	3.3091947103171937	CTGGGCCAATTAAAGT
chr8	69480370	69480371	chr8:69480371:A:T	rs2704032	A	T	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	69608777	69608778	chr8:69608778:G:A	rs147966836	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	69706275	69706276	chr8:69706276:A:G	rs2933053	A	G	A	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	69975599	69975600	chr8:69975600:A:G	rs2044888	A	G	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	70606312	70606313	chr8:70606313:C:T	rs268601	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	70606313	70606314	chr8:70606314:G:T	rs56913577	G	T	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	70663364	70663365	chr8:70663365:C:A	rs6993326	C	A	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	71301797	71301798	chr8:71301798:C:T	rs17711309	C	T	C	Hoxd3_MA0912.1	12	1	+	9.73723268767784	8.530480767672977	ATGTGGTAATTACATG
chr8	71911302	71911303	chr8:71911303:A:T	rs1443953	A	T	T	Hoxd3_MA0912.1	7	1	+	8.738895884646825	1.9592126420163967	TTTTTGTAATTGACCT
chr8	72095617	72095618	chr8:72095618:A:C	rs148787162	A	C	A	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	72095659	72095660	chr8:72095660:T:G	rs7008847	T	G	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	72573856	72573857	chr8:72573857:G:A	rs1431651	G	A	G	Hoxd3_MA0912.1	12	1	+	8.583176639054715	9.550698869993745	GTGGGCTAATTAGCAT
chr8	72804741	72804742	chr8:72804742:A:G	rs17186310	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr8	73250990	73250991	chr8:73250991:G:A	rs76478097	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	73310074	73310075	chr8:73310075:A:T	rs4237001	A	T	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	73438404	73438405	chr8:73438405:A:G	rs4738354	A	G	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr8	73673144	73673145	chr8:73673145:A:G	rs150527132	A	G	A	Hoxd3_MA0912.1	0	1	-	9.093501037031487	9.040995539653556	TAGAGCTAATTACAAC
chr8	73675440	73675441	chr8:73675441:C:G	rs10100009	C	G	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	73685188	73685189	chr8:73685189:A:C	rs28872487	A	C	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr8	73745873	73745874	chr8:73745874:C:T	rs1432799091	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	73870664	73870665	chr8:73870665:A:T	rs139936540	A	T	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	74147055	74147056	chr8:74147056:G:T	rs2912302	G	T	T	Hoxd3_MA0912.1	14	1	-	8.82293698293342	7.702556287884839	ATGTCATAATTACTCT
chr8	74232500	74232501	chr8:74232501:C:A	rs11784849	C	A	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	74755853	74755854	chr8:74755854:A:G	rs117796379	A	G	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	74850379	74850380	chr8:74850380:A:T	rs73689280	A	T	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	74850391	74850392	chr8:74850392:G:C	rs117203927	G	C	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	75510704	75510705	chr8:75510705:C:A	rs2941466	C	A	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr8	75609597	75609598	chr8:75609598:C:T	rs2941425	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	75944804	75944805	chr8:75944805:C:T	rs6991920	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr8	76252748	76252749	chr8:76252749:G:A	rs2082216	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	76370080	76370081	chr8:76370081:G:T	rs11992410	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr8	76841495	76841496	chr8:76841496:C:T	rs7827047	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr8	78094686	78094687	chr8:78094687:T:C	rs1481514	T	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	78208146	78208147	chr8:78208147:T:C	rs1200749073	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr8	78583427	78583428	chr8:78583428:A:C	rs16905812	A	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr8	79414827	79414828	chr8:79414828:C:T	rs115389146	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	79465048	79465049	chr8:79465049:T:C	rs74669741	T	C	T	Hoxd3_MA0912.1	8	1	-	8.333190567656498	1.444618108091135	TTGTGGCAATTATCAT
chr8	79539046	79539047	chr8:79539047:C:T	rs4400425	C	T	C	Hoxd3_MA0912.1	15	1	-	9.910520992874059	9.069522365914843	CTGGAATAATTAAAGG
chr8	79797989	79797990	chr8:79797990:T:C	rs80092564	T	C	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr8	79827399	79827400	chr8:79827400:G:C	rs557063670	G	C	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	80078149	80078150	chr8:80078150:T:A	chr8:80078150:T:A	T	A	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	80097668	80097669	chr8:80097669:G:T	rs57489716	G	T	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	80149212	80149213	chr8:80149213:C:T	rs62516124	C	T	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	80597175	80597176	chr8:80597176:T:C	rs72689741	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr8	81047881	81047882	chr8:81047882:T:C	rs16908466	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr8	81050716	81050717	chr8:81050717:G:A	rs16908481	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	81123194	81123195	chr8:81123195:G:A	rs16908643	G	A	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr8	81184675	81184676	chr8:81184676:A:G	rs1896216	A	G	G	Hoxd3_MA0912.1	9	1	-	9.39418668616792	2.505614226602558	TAGAGGCAATTACACT
chr8	81254961	81254962	chr8:81254962:T:C	rs34089098	T	C	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr8	81371471	81371472	chr8:81371472:T:A	rs118097910	T	A	T	Hoxd3_MA0912.1	6	1	+	8.386808757996732	4.049117696902692	CTGAACTAATTGAATG
chr8	81424513	81424514	chr8:81424514:G:A	rs55805496	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr8	81555207	81555208	chr8:81555208:C:T	rs2581540	C	T	c	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	81783507	81783508	chr8:81783508:A:G	rs10100803	A	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr8	81842129	81842130	chr8:81842130:C:A	rs4316108	C	A	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr8	81845957	81845958	chr8:81845958:G:A	rs62515562	G	A	G	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr8	81913278	81913279	chr8:81913279:C:A	rs4610705	C	A	C	Hoxd3_MA0912.1	13	1	-	8.32050134908094	9.29434253128165	TTGCTGTAATTATGCT
chr8	82287427	82287428	chr8:82287428:C:T	rs79888577	C	T	C	Hoxd3_MA0912.1	14	1	+	8.316954406110373	7.752617959978082	AGGTAATAATTACCCT
chr8	82360851	82360852	chr8:82360852:T:G	rs1031874	T	G	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	82360860	82360861	chr8:82360861:G:A	rs17720831	G	A	G	Hoxd3_MA0912.1	14	1	-	10.874490171439533	10.310153725307242	TTGTGGTAATTAGACT
chr8	82813601	82813602	chr8:82813602:A:G	rs75568604	A	G	A	Hoxd3_MA0912.1	10	1	-	8.495405114537567	1.715721871907139	ATGAATTAATTAGGCC
chr8	83042528	83042529	chr8:83042529:T:C	rs13271847	T	C	T	Hoxd3_MA0912.1	15	1	+	9.956636020294804	9.178931451706795	TTATTTTAATTACCTT
chr8	83073730	83073731	chr8:83073731:A:T	rs2122345	A	T	A	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	84181967	84181968	chr8:84181968:G:A	rs549155785	G	A	.	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	84900976	84900977	chr8:84900977:G:T	rs1346290	G	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	85007463	85007464	chr8:85007464:C:G	rs2896440	C	G	g	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr8	85922972	85922973	chr8:85922973:G:C	rs2059607	G	C	G	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	86007574	86007575	chr8:86007575:T:A	rs1483769	T	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr8	86141104	86141105	chr8:86141105:T:C	rs2721254	T	C	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	86548351	86548352	chr8:86548352:C:G	chr8:86548352:C:G	C	G	C	Hoxd3_MA0912.1	13	1	-	7.801398572325178	9.37947648303826	CTGATGTAATGAAGGG
chr8	86548355	86548356	chr8:86548356:A:T	chr8:86548356:A:T	A	T	A	Hoxd3_MA0912.1	9	1	-	7.801398572325178	3.3107213855581863	CTGATGTAATGAAGGG
chr8	86564605	86564606	chr8:86564606:C:T	rs719039	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	87349437	87349438	chr8:87349438:T:C	rs10089265	T	C	C	Hoxd3_MA0912.1	8	1	-	8.217432285091048	1.3288598255256852	CTGAGCTCATGACACT
chr8	87700064	87700065	chr8:87700065:A:G	rs80136576	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	87755849	87755850	chr8:87755850:T:C	rs112556232	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	87817473	87817474	chr8:87817474:C:T	rs56066549	C	T	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr8	88175816	88175817	chr8:88175817:T:C	rs7812822	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	89259846	89259847	chr8:89259847:T:C	rs7835496	T	C	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	89559533	89559534	chr8:89559534:G:A	rs1601766	G	A	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	89659112	89659113	chr8:89659113:A:G	rs113986813	A	G	a	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	89760691	89760692	chr8:89760692:T:C	rs39761	T	C	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr8	89766284	89766285	chr8:89766285:G:A	rs42490	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	89983742	89983743	chr8:89983743:T:C	rs1805799	T	C	T	Hoxd3_MA0912.1	7	1	-	7.917992370087141	1.1383091274567136	CTCGGGTAATGAAATT
chr8	89983758	89983759	chr8:89983759:A:G	rs202160283	A	G	A	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr8	90311339	90311340	chr8:90311340:T:C	rs7845926	T	C	C	Hoxd3_MA0912.1	3	1	+	10.603170973218775	9.866489750639102	CAGTGGTAATTACCTT
chr8	90453058	90453059	chr8:90453059:A:G	rs12679836	A	G	a	Hoxd3_MA0912.1	31	0	+	0	0	.
chr8	90473349	90473350	chr8:90473350:A:T	rs1028255	A	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	91249184	91249185	chr8:91249185:G:A	rs73305623	G	A	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr8	91271977	91271978	chr8:91271978:G:A	rs34705486	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	91348167	91348168	chr8:91348168:T:C	rs921231	T	C	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr8	91653698	91653699	chr8:91653699:C:T	rs7839679	C	T	T	Hoxd3_MA0912.1	5	1	-	7.2935413539505305	6.568977977157207	CAGGGGCAATGAACTT
chr8	92456289	92456290	chr8:92456290:G:A	rs526354	G	A	A	Hoxd3_MA0912.1	15	1	+	8.898578463286043	8.057579836326827	TTGGCTTAATTAAAAG
chr8	92470151	92470152	chr8:92470152:T:C	rs2046130	T	C	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr8	92794481	92794482	chr8:92794482:T:A	rs111987422	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	93026262	93026263	chr8:93026263:G:T	rs279985	G	T	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr8	93422549	93422550	chr8:93422550:A:G	rs57620757	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr8	93495971	93495972	chr8:93495972:C:T	rs10106360	C	T	T	Hoxd3_MA0912.1	15	1	+	6.863827394396827	7.6415319629848355	CCGGGCTAATTGGCGC
chr8	93495984	93495985	chr8:93495985:G:C	rs533156695	G	C	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr8	93599981	93599982	chr8:93599982:A:C	rs4631430	A	C	A	Hoxd3_MA0912.1	1	1	-	8.14550471961038	6.061444232074248	ATGATCTCATTACACC
chr8	93858788	93858789	chr8:93858789:G:C	rs6471404	G	C	G	Hoxd3_MA0912.1	4	1	+	8.057428077977612	6.4793501672645295	CTGAGACAATTGCTCT
chr8	93983026	93983027	chr8:93983027:G:T	rs4489299	G	T	G	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	93993660	93993661	chr8:93993661:T:A	rs10504932	T	A	A	Hoxd3_MA0912.1	9	1	+	8.77610230634215	4.285425119575157	TTGGAGTAATTAGAAG
chr8	94172325	94172326	chr8:94172326:T:C	rs2514812	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	94193360	94193361	chr8:94193361:C:T	rs7826529	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	94311104	94311105	chr8:94311105:C:T	rs747790	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr8	94691581	94691582	chr8:94691582:G:T	rs7842716	G	T	G	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr8	95005768	95005769	chr8:95005769:A:G	rs180965318	A	G	A	Hoxd3_MA0912.1	6	1	-	10.499063533364476	8.713137585183482	TTGGTCTAATTAAAGG
chr8	95162514	95162515	chr8:95162515:C:A	rs78848991	C	A	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr8	95195493	95195494	chr8:95195494:A:G	rs1465912	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr8	95488805	95488806	chr8:95488806:T:C	rs6471539	T	C	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	95715735	95715736	chr8:95715736:G:A	rs150906603	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	95772689	95772690	chr8:95772690:A:G	rs17686658	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	96261284	96261285	chr8:96261285:C:T	rs3808385	C	T	C	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	96261314	96261315	chr8:96261315:G:A	rs3808386	G	A	G	Hoxd3_MA0912.1	12	1	+	8.836006082724555	9.803528313663586	CTGCGCTAATTAGCCA
chr8	96345518	96345519	chr8:96345519:T:G	chr8:96345519:T:G	T	G	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	96793498	96793499	chr8:96793499:T:G	rs188745218	T	G	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	97114908	97114909	chr8:97114909:T:C	rs34297447	T	C	T	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	97174065	97174066	chr8:97174066:A:C	rs66692444	A	C	A	Hoxd3_MA0912.1	1	1	+	8.798382529751143	7.940558256376951	CAGATATAATTAATGG
chr8	97184085	97184086	chr8:97184086:T:C	rs61347853	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	97184115	97184116	chr8:97184116:T:C	rs62507191	T	C	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr8	97265514	97265515	chr8:97265515:C:T	rs117707026	C	T	C	Hoxd3_MA0912.1	13	1	-	7.284512975091891	8.2583541572926	CTGAGGTAATTGGGTC
chr8	97265519	97265520	chr8:97265520:T:C	rs62507229	T	C	C	Hoxd3_MA0912.1	8	1	-	7.284512975091891	0.39594051552652926	CTGAGGTAATTGGGTC
chr8	97267486	97267487	chr8:97267487:C:T	rs2853308	C	T	T	Hoxd3_MA0912.1	2	1	-	8.387318673678044	6.9374836295210045	CTGATGTAATGACTTG
chr8	97375555	97375556	chr8:97375556:A:G	rs7837799	A	G	A	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	97434041	97434042	chr8:97434042:C:G	rs2460229	C	G	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	97899999	97900000	chr8:97900000:G:A	rs78426636	G	A	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	98495565	98495566	chr8:98495566:C:T	rs577375298	C	T	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	98826387	98826388	chr8:98826388:C:T	rs76416678	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	99298702	99298703	chr8:99298703:A:G	rs7006027	A	G	g	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	99612519	99612520	chr8:99612520:T:C	rs72674687	T	C	T	Hoxd3_MA0912.1	8	1	-	10.117852676521467	3.2292802169561043	TTAGGATAATTACTCT
chr8	99824133	99824134	chr8:99824134:A:G	rs2290153	A	G	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	100216891	100216892	chr8:100216892:C:A	chr8:100216892:C:A	C	A	C	Hoxd3_MA0912.1	2	1	+	9.584817901397695	9.918457274934603	TTCAGTTAATTATCTT
chr8	100258516	100258517	chr8:100258517:C:T	rs145481850	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr8	100416917	100416918	chr8:100416918:C:T	rs535611334	C	T	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr8	100440706	100440707	chr8:100440707:C:T	rs10107200	C	T	c	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	100440739	100440740	chr8:100440740:G:A	rs1367064984	G	A	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	100562982	100562983	chr8:100562983:T:G	rs2469654	T	G	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	100719564	100719565	chr8:100719565:C:T	rs73700220	C	T	T	Hoxd3_MA0912.1	34	0	+	0	0	.
chr8	100789137	100789138	chr8:100789138:G:A	rs71516890	G	A	G	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr8	100808804	100808805	chr8:100808805:C:T	rs7003310	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr8	100846391	100846392	chr8:100846392:A:G	rs7841788	A	G	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr8	100884540	100884541	chr8:100884541:C:G	rs35515344	C	G	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	101029447	101029448	chr8:101029448:C:T	rs11993619	C	T	C	Hoxd3_MA0912.1	3	1	-	8.904340519392605	9.018438270431627	GGGGGTTAATTAACCT
chr8	101123473	101123474	chr8:101123474:A:T	chr8:101123474:A:T	A	T	A	Hoxd3_MA0912.1	7	1	+	9.968565914738608	3.1888826721081815	TTGAATTAATTGAAGT
chr8	101127124	101127125	chr8:101127125:G:A	rs144272615	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	101232125	101232126	chr8:101232126:G:A	rs60426890	G	A	G	Hoxd3_MA0912.1	12	1	-	8.667740871435583	7.4609889514307195	TTGTTGTAATTGCCTG
chr8	101494633	101494634	chr8:101494634:A:G	rs674330	A	G	G	Hoxd3_MA0912.1	3	1	+	9.604557550039386	9.490459799000362	CTAATTTAATTAATCG
chr8	101635823	101635824	chr8:101635824:A:G	rs116631424	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	101877995	101877996	chr8:101877996:T:C	rs495636	T	C	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	102102335	102102336	chr8:102102336:G:T	rs670976	G	T	G	Hoxd3_MA0912.1	3	1	-	7.736332385838831	9.037350054550792	CTGCGCTAATTGCTTC
chr8	102411853	102411854	chr8:102411854:C:T	rs369227718	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	102561100	102561101	chr8:102561101:C:G	rs2289033	C	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr8	102653138	102653139	chr8:102653139:C:A	rs187659155	C	A	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	102885621	102885622	chr8:102885622:G:A	rs117306101	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr8	103058562	103058563	chr8:103058563:G:T	rs72669349	G	T	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr8	103126143	103126144	chr8:103126144:A:T	rs12677847	A	T	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr8	103133906	103133907	chr8:103133907:T:C	rs576158740	T	C	T	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	104163952	104163953	chr8:104163953:C:T	rs1823168	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	104279169	104279170	chr8:104279170:C:T	rs145532437	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	104580832	104580833	chr8:104580833:G:C	rs115228374	G	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	104754813	104754814	chr8:104754814:C:G	rs145072060	C	G	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	104774201	104774202	chr8:104774202:C:T	rs72674159	C	T	c	Hoxd3_MA0912.1	33	0	+	0	0	.
chr8	105641825	105641826	chr8:105641826:A:G	rs9656866	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr8	105641862	105641863	chr8:105641863:G:A	rs9656867	G	A	A	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	105977859	105977860	chr8:105977860:G:C	rs4734892	G	C	C	Hoxd3_MA0912.1	14	1	-	6.86310508690948	6.686689721625033	CTGGTCTAATGGCTCG
chr8	106773259	106773260	chr8:106773260:A:G	rs10088694	A	G	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	106858278	106858279	chr8:106858279:G:C	rs114305284	G	C	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	107214832	107214833	chr8:107214833:T:C	rs7017095	T	C	T	Hoxd3_MA0912.1	1	1	+	8.744507531525274	6.660447043989145	ATGGTTTAATTAGTTG
chr8	107253569	107253570	chr8:107253570:T:C	rs58785722	T	C	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr8	107429572	107429573	chr8:107429573:A:G	rs59702603	A	G	A	Hoxd3_MA0912.1	7	1	+	8.54720699137068	1.7675237487402529	CAGGGTTAATTATTTG
chr8	107548154	107548155	chr8:107548155:C:T	rs393969	C	T	C	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	107953085	107953086	chr8:107953086:T:C	rs634897	T	C	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	108142179	108142180	chr8:108142180:T:A	rs405534	T	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr8	108393347	108393348	chr8:108393348:G:A	rs7821753	G	A	g	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	108911454	108911455	chr8:108911455:A:T	rs79197992	A	T	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	109346442	109346443	chr8:109346443:T:C	rs2926239	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	109346461	109346462	chr8:109346462:A:G	rs2980583	A	G	G	Hoxd3_MA0912.1	15	1	-	8.791458113933162	8.013753545345153	CTGCATTAATTGCACT
chr8	109359205	109359206	chr8:109359206:A:G	rs7835131	A	G	A	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	109588331	109588332	chr8:109588332:A:C	rs142444677	A	C	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr8	109607470	109607471	chr8:109607471:C:A	rs115516622	C	A	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	109650908	109650909	chr8:109650909:C:A	rs1573853	C	A	A	Hoxd3_MA0912.1	2	1	-	8.379110193051126	7.061919623500382	TAGGGATAATTGATGT
chr8	109741442	109741443	chr8:109741443:C:T	rs7463805	C	T	C	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	110139443	110139444	chr8:110139444:A:G	rs10505139	A	G	A	Hoxd3_MA0912.1	29	0	-	0	0	.
chr8	110334321	110334322	chr8:110334322:T:C	rs78076069	T	C	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	110835425	110835426	chr8:110835426:G:A	rs62522388	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	111669332	111669333	chr8:111669333:T:C	rs10090698	T	C	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	111711973	111711974	chr8:111711974:T:C	rs4876426	T	C	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr8	112653017	112653018	chr8:112653018:C:T	rs59155160	C	T	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	113130584	113130585	chr8:113130585:T:C	rs113398391	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr8	113708538	113708539	chr8:113708539:G:A	rs10100162	G	A	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	114013851	114013852	chr8:114013852:A:G	rs7017673	A	G	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	114047511	114047512	chr8:114047512:C:T	rs62540729	C	T	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	114348165	114348166	chr8:114348166:T:C	rs971445	T	C	T	Hoxd3_MA0912.1	9	1	+	8.924469871822874	2.03589741225751	TTCACATAATTAACCT
chr8	115396975	115396976	chr8:115396976:C:T	rs190704170	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	115593949	115593950	chr8:115593950:G:A	rs3808462	G	A	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	115741916	115741917	chr8:115741917:C:T	rs985161	C	T	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	115950378	115950379	chr8:115950379:G:A	rs13277848	G	A	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	116402220	116402221	chr8:116402221:T:G	rs10104967	T	G	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr8	116572546	116572547	chr8:116572547:C:A	rs17663474	C	A	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	116729673	116729674	chr8:116729674:T:C	rs17811450	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr8	117038014	117038015	chr8:117038015:C:T	rs183088315	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr8	117947848	117947849	chr8:117947849:A:C	rs11562704	A	C	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	118202744	118202745	chr8:118202745:C:T	rs2514949	C	T	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	118291020	118291021	chr8:118291021:C:T	rs7465623	C	T	T	Hoxd3_MA0912.1	14	1	+	9.266389435695116	8.702052989562825	CTGGCCTAATTATTCT
chr8	118748556	118748557	chr8:118748557:T:C	rs6469765	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr8	118866439	118866440	chr8:118866440:T:C	rs1493943	T	C	T	Hoxd3_MA0912.1	26	0	+	0	0	.
chr8	119270214	119270215	chr8:119270215:T:C	rs12682591	T	C	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr8	119642900	119642901	chr8:119642901:A:G	rs965301	A	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	119655332	119655333	chr8:119655333:A:C	rs13272559	A	C	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	119847579	119847580	chr8:119847580:T:C	rs7017279	T	C	T	Hoxd3_MA0912.1	3	1	+	7.499187554482811	6.762506331903138	TAGTGCTAATGACTGC
chr8	119868723	119868724	chr8:119868724:G:A	rs117257206	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr8	119892435	119892436	chr8:119892436:T:C	rs10094455	T	C	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	119892447	119892448	chr8:119892448:T:G	rs10094458	T	G	G	Hoxd3_MA0912.1	11	1	-	8.722486415935926	1.9778502465235963	TTGGATTCATTACTAT
chr8	119932966	119932967	chr8:119932967:T:A	rs62528692	T	A	T	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	120071049	120071050	chr8:120071050:A:G	rs2875928	A	G	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	120198010	120198011	chr8:120198011:C:T	rs2305599	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	120514506	120514507	chr8:120514507:A:C	rs12155569	A	C	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr8	120742671	120742672	chr8:120742672:C:T	rs56212702	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr8	120862398	120862399	chr8:120862399:C:T	rs10113493	C	T	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	121096590	121096591	chr8:121096591:G:T	rs11779893	G	T	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr8	121429865	121429866	chr8:121429866:C:T	rs7846624	C	T	T	Hoxd3_MA0912.1	15	1	-	8.265701125870086	7.42470249891087	AGGAGGTAATTAACAG
chr8	121471593	121471594	chr8:121471594:T:A	rs7009466	T	A	A	Hoxd3_MA0912.1	7	1	-	10.83458988905945	4.054906646429021	TTGAAGTAATTAGACT
chr8	121560150	121560151	chr8:121560151:G:C	rs76951977	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	121631667	121631668	chr8:121631668:G:A	rs4618701	G	A	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	121858317	121858318	chr8:121858318:A:G	rs16896259	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	122268840	122268841	chr8:122268841:T:C	rs57580753	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	122636871	122636872	chr8:122636872:T:C	rs72711822	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr8	122718603	122718604	chr8:122718604:T:A	rs58712098	T	A	T	Hoxd3_MA0912.1	8	1	-	8.690742861876394	4.200065675109403	ATGATTCAATTACCTC
chr8	122795207	122795208	chr8:122795208:G:A	rs755951420	G	A	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr8	122863339	122863340	chr8:122863340:C:T	rs113664023	C	T	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr8	122919623	122919624	chr8:122919624:G:T	rs16897667	G	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	122961320	122961321	chr8:122961321:A:G	rs10108984	A	G	A	Hoxd3_MA0912.1	34	0	+	0	0	.
chr8	122995974	122995975	chr8:122995975:A:T	rs12056583	A	T	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	123180474	123180475	chr8:123180475:G:A	rs1183097395	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr8	123472220	123472221	chr8:123472221:A:C	rs16898375	A	C	A	Hoxd3_MA0912.1	9	1	-	9.159975288662212	4.669298101895219	CAGGGCTAATTACACA
chr8	123485802	123485803	chr8:123485803:A:G	rs6999471	A	G	A	Hoxd3_MA0912.1	15	1	+	8.416248766327044	9.25724739328626	CCGATCTAATTACCCA
chr8	123565180	123565181	chr8:123565181:T:C	rs72709099	T	C	T	Hoxd3_MA0912.1	0	1	-	9.061394224883031	7.7409464295607275	ATCACTTAATTACCCT
chr8	123614742	123614743	chr8:123614743:T:C	rs4871396	T	C	C	Hoxd3_MA0912.1	8	1	-	8.549018575860291	1.66044611629493	TTGGGTTCATTACTAC
chr8	123630474	123630475	chr8:123630475:C:T	rs78185616	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr8	123945723	123945724	chr8:123945724:A:C	rs4871444	A	C	A	Hoxd3_MA0912.1	7	1	+	8.601903350222564	6.627960984042046	TGGAACTAATTAGCTT
chr8	124168145	124168146	chr8:124168146:A:G	rs11775425	A	G	N	Hoxd3_MA0912.1	0	1	-	8.860712863360185	8.808207365982254	TTGAGCTCATTATAGT
chr8	124444686	124444687	chr8:124444687:A:G	rs4602869	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	124561132	124561133	chr8:124561133:A:G	rs17298912	A	G	A	Hoxd3_MA0912.1	8	1	+	8.293289387634976	1.4047169280696146	CTGAGCTCATTAAAAC
chr8	124561159	124561160	chr8:124561160:G:A	rs112385015	G	A	G	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	124692444	124692445	chr8:124692445:A:C	rs72714767	A	C	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	124718552	124718553	chr8:124718553:C:T	rs117045236	C	T	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr8	124720762	124720763	chr8:124720763:C:T	rs891544	C	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr8	124727659	124727660	chr8:124727660:T:G	rs116700857	T	G	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr8	124857603	124857604	chr8:124857604:A:C	rs77357780	A	C	A	Hoxd3_MA0912.1	9	1	-	7.109508900086601	2.618831713319608	TTGTGCTAATGGCCTG
chr8	125006993	125006994	chr8:125006994:T:C	rs7838748	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr8	125175771	125175772	chr8:125175772:A:G	rs28469260	A	G	A	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr8	125291771	125291772	chr8:125291772:G:C	rs7008046	G	C	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	125337440	125337441	chr8:125337441:C:A	rs76209931	C	A	C	Hoxd3_MA0912.1	2	1	-	7.55634677692013	6.239156207369384	CAGAGATAATTGCCCA
chr8	125340910	125340911	chr8:125340911:C:T	rs77777704	C	T	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr8	125440266	125440267	chr8:125440267:T:C	rs72647352	T	C	T	Hoxd3_MA0912.1	9	1	+	6.769808440095322	-0.11876401947003984	CTGGGGCAATTGCAAC
chr8	125633102	125633103	chr8:125633103:C:A	rs10956254	C	A	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr8	125674819	125674820	chr8:125674820:G:T	rs12155985	G	T	G	Hoxd3_MA0912.1	14	1	-	8.937757866122277	7.817377171073697	ATGAGCCAATTAAACC
chr8	125674833	125674834	chr8:125674834:T:C	rs10956257	T	C	C	Hoxd3_MA0912.1	0	1	-	8.937757866122277	7.617310070799974	ATGAGCCAATTAAACC
chr8	125722211	125722212	chr8:125722212:C:T	chr8:125722212:C:T	C	T	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	125769903	125769904	chr8:125769904:C:G	rs13254658	C	G	G	Hoxd3_MA0912.1	12	1	-	8.405245635516174	9.372767866455202	CTGGCATAATTAGATT
chr8	125804294	125804295	chr8:125804295:T:C	rs9792179	T	C	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	126368227	126368228	chr8:126368228:T:A	rs142768837	T	A	T	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	126374829	126374830	chr8:126374830:A:G	rs74664055	A	G	A	Hoxd3_MA0912.1	16	0	+	0	0	.
chr8	126374980	126374981	chr8:126374981:A:G	rs75395830	A	G	A	Hoxd3_MA0912.1	17	0	-	0	0	.
chr8	126433772	126433773	chr8:126433773:T:C	rs72718094	T	C	C	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	126579712	126579713	chr8:126579713:C:T	rs11994414	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	126579718	126579719	chr8:126579719:A:G	rs78494093	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	126827357	126827358	chr8:126827358:G:C	rs16901733	G	C	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr8	126845985	126845986	chr8:126845986:G:A	rs3999836	G	A	G	Hoxd3_MA0912.1	-18	0	+	0	0	.
chr8	126990556	126990557	chr8:126990557:G:C	rs12678076	G	C	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr8	127159782	127159783	chr8:127159783:T:C	rs7002343	T	C	t	Hoxd3_MA0912.1	12	1	-	8.486441115580083	7.518918884641055	CTGTCATAATTAAAGG
chr8	127652073	127652074	chr8:127652074:C:T	rs76596255	C	T	C	Hoxd3_MA0912.1	12	1	+	9.903988768391123	8.69723684838626	ATGAAGCAATTACCCT
chr8	127734764	127734765	chr8:127734765:C:A	rs117748025	C	A	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr8	127734765	127734766	chr8:127734766:C:A	rs28461617	C	A	c	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr8	127736929	127736930	chr8:127736930:T:G	chr8:127736930:T:G	T	G	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr8	127742840	127742841	chr8:127742841:G:A	rs62515808	G	A	G	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr8	127759619	127759620	chr8:127759620:T:G	rs75841016	T	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	127759651	127759652	chr8:127759652:A:G	rs140439293	A	G	A	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	127763564	127763565	chr8:127763565:G:A	rs56284488	G	A	G	Hoxd3_MA0912.1	4	1	+	9.113435646681653	8.509198918169279	CAATGGTAATTAAACT
chr8	127845739	127845740	chr8:127845740:G:A	rs28631713	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	128025737	128025738	chr8:128025738:T:G	rs904522	T	G	G	Hoxd3_MA0912.1	16	0	+	0	0	.
chr8	128047817	128047818	chr8:128047818:C:T	rs75843346	C	T	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	128053064	128053065	chr8:128053065:T:A	rs75855504	T	A	T	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	128085149	128085150	chr8:128085150:A:G	rs2720671	A	G	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	128426749	128426750	chr8:128426750:C:G	rs6981816	C	G	C	Hoxd3_MA0912.1	12	1	+	8.205399771736001	7.237877540796971	TTGGTATCATTACCTG
chr8	128426772	128426773	chr8:128426773:T:A	rs12544478	T	A	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	128461759	128461760	chr8:128461760:A:G	rs1400473	A	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	128525265	128525266	chr8:128525266:G:A	rs16903059	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	128848420	128848421	chr8:128848421:C:T	rs72726590	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	128973193	128973194	chr8:128973194:A:G	rs11787407	A	G	G	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	129221246	129221247	chr8:129221247:C:T	rs11787174	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr8	129221256	129221257	chr8:129221257:G:A	rs77939820	G	A	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr8	129299403	129299404	chr8:129299404:T:C	rs7006776	T	C	T	Hoxd3_MA0912.1	6	1	+	9.828393153738759	8.042467205557767	TTGTATTAATTAAGTT
chr8	129341346	129341347	chr8:129341347:A:G	rs5018943	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	129833836	129833837	chr8:129833837:G:A	rs62525975	G	A	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	129884061	129884062	chr8:129884062:C:T	rs183027180	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	129884081	129884082	chr8:129884082:C:T	rs10095752	C	T	C	Hoxd3_MA0912.1	7	1	+	9.097230059268716	4.291489182818807	CTGGAGTCATTAATTT
chr8	130105638	130105639	chr8:130105639:T:C	rs34303787	T	C	T	Hoxd3_MA0912.1	9	1	+	10.520972466427093	3.632400006861731	TTAAGTTAATTACTTT
chr8	130105665	130105666	chr8:130105666:A:T	rs1031475	A	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr8	130244928	130244929	chr8:130244929:A:G	rs116982990	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr8	130244962	130244963	chr8:130244963:G:A	rs76701071	G	A	G	Hoxd3_MA0912.1	0	1	-	7.518725409504116	7.571230906882045	CTGCTGTAATTGGAGT
chr8	130504109	130504110	chr8:130504110:A:G	rs13276424	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	130526674	130526675	chr8:130526675:C:T	rs4273865	C	T	C	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	130528339	130528340	chr8:130528340:G:T	rs11782944	G	T	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr8	130528351	130528352	chr8:130528352:G:A	rs147063928	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	130549869	130549870	chr8:130549870:A:T	rs4276705	A	T	T	Hoxd3_MA0912.1	15	1	-	8.730728647861591	7.065720884272681	TAGATTTAATGACTCT
chr8	131032620	131032621	chr8:131032621:A:G	rs867964	A	G	G	Hoxd3_MA0912.1	3	1	+	9.93921167562581	9.825113924586786	CATAGTTAATTAATCT
chr8	131646073	131646074	chr8:131646074:C:T	rs16904490	C	T	C	Hoxd3_MA0912.1	14	1	-	7.977350088408224	7.03338475864409	CCTTGTTAATTAGCGT
chr8	131705583	131705584	chr8:131705584:T:A	rs115268215	T	A	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	132014967	132014968	chr8:132014968:G:A	rs6471023	G	A	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	132349669	132349670	chr8:132349670:C:T	rs62520380	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr8	132446609	132446610	chr8:132446610:G:C	rs2721906	G	C	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr8	132486972	132486973	chr8:132486973:C:T	rs10100626	C	T	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr8	132713472	132713473	chr8:132713473:C:T	rs10110686	C	T	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr8	132713477	132713478	chr8:132713478:G:T	rs10110952	G	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	132955640	132955641	chr8:132955641:G:C	rs885196	G	C	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr8	133103982	133103983	chr8:133103983:C:T	rs13256826	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	133276505	133276506	chr8:133276506:A:C	rs11776198	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	133405448	133405449	chr8:133405449:G:A	rs11781795	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	133572945	133572946	chr8:133572946:C:G	rs2922467	C	G	G	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr8	133842321	133842322	chr8:133842322:G:T	rs10090807	G	T	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	133855728	133855729	chr8:133855729:G:A	rs183576893	G	A	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr8	133942515	133942516	chr8:133942516:T:G	rs60792699	T	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	134231877	134231878	chr8:134231878:G:A	rs62525775	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr8	134293348	134293349	chr8:134293349:T:A	rs35360341	T	A	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	134529587	134529588	chr8:134529588:A:G	rs7011356	A	G	A	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr8	134740403	134740404	chr8:134740404:C:T	rs13272671	C	T	c	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	135014931	135014932	chr8:135014932:C:A	rs57599220	C	A	c	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr8	135064900	135064901	chr8:135064901:G:A	rs77098574	G	A	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr8	135128251	135128252	chr8:135128252:C:T	rs1480785	C	T	C	Hoxd3_MA0912.1	15	1	+	7.927353234791375	8.705057803379383	TGGAGTTAATTGACTC
chr8	135189530	135189531	chr8:135189531:G:C	rs12677621	G	C	C	Hoxd3_MA0912.1	15	1	+	6.828742079084312	6.875046647125998	CTGGGTCAATTGGAGG
chr8	135495448	135495449	chr8:135495449:T:C	rs960730	T	C	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr8	135625927	135625928	chr8:135625928:A:T	rs10089538	A	T	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr8	135715913	135715914	chr8:135715914:G:A	rs6577661	G	A	G	Hoxd3_MA0912.1	14	1	+	7.337231018179094	6.393265688414959	CTGGGCTAATGGAAGC
chr8	136003617	136003618	chr8:136003618:T:C	rs575950363	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr8	136022585	136022586	chr8:136022586:T:A	rs12547225	T	A	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr8	136026717	136026718	chr8:136026718:T:C	chr8:136026718:T:C	T	C	T	Hoxd3_MA0912.1	11	1	-	7.982018333560243	6.196092385379249	CTGTGTCAATGAAAGT
chr8	137010028	137010029	chr8:137010029:A:G	rs7357354	A	G	A	Hoxd3_MA0912.1	0	1	-	9.753462369477708	9.700956872099777	TTGGGCTAATTGATTT
chr8	137200983	137200984	chr8:137200984:A:T	rs28571696	A	T	T	Hoxd3_MA0912.1	12	1	-	10.307794608878957	11.514546528883821	TTGGGGTAATTATTCC
chr8	137240550	137240551	chr8:137240551:G:T	rs11166696	G	T	G	Hoxd3_MA0912.1	11	1	+	8.370229743707142	5.818464630794095	TTGGAGTAATTGGTTT
chr8	137303753	137303754	chr8:137303754:C:A	rs7829832	C	A	A	Hoxd3_MA0912.1	4	1	-	9.033385259721694	8.42914853120932	CAGAGGTAATTAAGAT
chr8	137598390	137598391	chr8:137598391:A:T	rs950022	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr8	137984843	137984844	chr8:137984844:T:A	rs16908100	T	A	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr8	138032124	138032125	chr8:138032125:C:A	rs12542562	C	A	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	138114287	138114288	chr8:138114288:C:T	rs113745325	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr8	138196569	138196570	chr8:138196570:T:C	rs4909749	T	C	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr8	138400288	138400289	chr8:138400289:T:A	rs4419816	T	A	A	Hoxd3_MA0912.1	8	1	-	8.346450116844215	3.8557729300772228	CTGAATCAATTGCCTT
chr8	138543965	138543966	chr8:138543966:C:T	rs58825673	C	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr8	138581422	138581423	chr8:138581423:G:A	rs6577934	G	A	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr8	138987111	138987112	chr8:138987112:A:G	rs16909925	A	G	A	Hoxd3_MA0912.1	9	1	-	10.26589946461514	3.377327005049777	TTGATTTAATTAAACA
chr8	138987131	138987132	chr8:138987132:T:A	rs11985057	T	A	T	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr8	139357661	139357662	chr8:139357662:G:A	rs16910519	G	A	G	Hoxd3_MA0912.1	2	1	-	9.034156278055635	9.50044012619884	CTCATTTAATTAACCA
chr8	139594064	139594065	chr8:139594065:A:G	rs4736083	A	G	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	139594086	139594087	chr8:139594087:A:G	rs2615372	A	G	G	Hoxd3_MA0912.1	4	1	-	8.575726452159715	7.601885269959007	CAGGTTTAATTGCTGT
chr8	139646557	139646558	chr8:139646558:T:C	rs3780051	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr8	139859341	139859342	chr8:139859342:A:G	rs139300620	A	G	A	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr8	139886421	139886422	chr8:139886422:C:T	rs922279	C	T	t	Hoxd3_MA0912.1	24	0	+	0	0	.
chr8	140048893	140048894	chr8:140048894:C:T	rs143297841	C	T	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr8	140352725	140352726	chr8:140352726:C:G	rs60598280	C	G	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr8	140467418	140467419	chr8:140467419:C:G	rs147327629	C	G	C	Hoxd3_MA0912.1	29	0	-	0	0	.
chr8	140536113	140536114	chr8:140536114:C:T	rs62527841	C	T	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	140600268	140600269	chr8:140600269:T:C	rs11774599	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr8	140660807	140660808	chr8:140660808:C:A	rs9324530	C	A	A	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr8	140724286	140724287	chr8:140724287:C:T	rs7834669	C	T	C	Hoxd3_MA0912.1	26	0	-	0	0	.
chr8	140994809	140994810	chr8:140994810:A:G	rs10106750	A	G	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr8	141059161	141059162	chr8:141059162:C:T	rs116560930	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr8	141223473	141223474	chr8:141223474:G:A	rs10112337	G	A	G	Hoxd3_MA0912.1	15	1	-	7.280128309882725	8.057832878470734	TGGGAGTAATGACCGC
chr8	141326580	141326581	chr8:141326581:G:A	rs13253516	G	A	A	Hoxd3_MA0912.1	5	1	-	8.48181890053812	8.799140342424527	CTCGACTAATTGACCT
chr8	141349450	141349451	chr8:141349451:A:G	rs7386474	A	G	A	Hoxd3_MA0912.1	8	1	+	9.089855551928723	2.201283092363361	TTGAGCCAATTAATTC
chr8	141558809	141558810	chr8:141558810:G:A	rs77396480	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr8	141571077	141571078	chr8:141571078:C:T	rs117134600	C	T	C	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	141686230	141686231	chr8:141686231:G:T	rs7003104	G	T	T	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr8	141756287	141756288	chr8:141756288:C:T	rs13274472	C	T	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr8	141766565	141766566	chr8:141766566:T:C	rs73369683	T	C	T	Hoxd3_MA0912.1	1	1	+	7.230579916975014	5.146519429438881	CTGGGCCAATGACCCA
chr8	141779989	141779990	chr8:141779990:T:A	rs78729988	T	A	T	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr8	141861042	141861043	chr8:141861043:C:T	rs1054174751	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	141974044	141974045	chr8:141974045:C:G	rs72698420	C	G	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr8	142073710	142073711	chr8:142073711:C:T	rs111799154	C	T	C	Hoxd3_MA0912.1	0	1	-	7.617310070799974	8.937757866122277	GTGAGCCAATTAAACC
chr8	142805619	142805620	chr8:142805620:G:T	rs146845329	G	T	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr8	142805637	142805638	chr8:142805638:A:G	rs13255523	A	G	A	Hoxd3_MA0912.1	7	1	+	8.463029150889914	1.6833459082594884	TGGGGCTAATTATCGC
chr8	143264633	143264634	chr8:143264634:C:T	rs59556912	C	T	c	Hoxd3_MA0912.1	16	0	-	0	0	.
chr8	143362038	143362039	chr8:143362039:T:G	rs13250507	T	G	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	143396559	143396560	chr8:143396560:A:G	rs7813939	A	G	G	Hoxd3_MA0912.1	1	1	-	8.340910692357596	6.256850204821466	CTGGGATAATTGATTG
chr8	143421313	143421314	chr8:143421314:C:T	rs75639325	C	T	T	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr8	143672187	143672188	chr8:143672188:A:G	rs7002650	A	G	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr8	143847638	143847639	chr8:143847639:C:T	rs11779128	C	T	.	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr8	143890860	143890861	chr8:143890861:C:T	rs7465629	C	T	.	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr8	144079374	144079375	chr8:144079375:C:T	rs78981172	C	T	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr8	144312906	144312907	chr8:144312907:G:A	rs7008457	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr8	144762268	144762269	chr8:144762269:T:C	rs140991635	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	325298	325299	chr9:325299:T:C	rs10813612	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	392681	392682	chr9:392682:C:T	rs16937757	C	T	C	Hoxd3_MA0912.1	1	1	+	8.930999982430798	11.01506046996693	CCGAGCTAATTAAGGT
chr9	557843	557844	chr9:557844:G:A	rs73371066	G	A	G	Hoxd3_MA0912.1	2	1	+	11.199967533654805	9.750132489497766	CTGGTTTAATTAAATT
chr9	602985	602986	chr9:602986:A:G	rs1532310	A	G	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr9	612356	612357	chr9:612357:G:T	rs10115504	G	T	G	Hoxd3_MA0912.1	14	1	-	8.930138536949002	7.809757841900422	TTGAGATAATGACACC
chr9	718013	718014	chr9:718014:T:C	rs17433274	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	720582	720583	chr9:720583:C:T	rs7861700	C	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	720615	720616	chr9:720616:T:G	rs12003893	T	G	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr9	723114	723115	chr9:723115:C:G	rs73374850	C	G	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	735088	735089	chr9:735089:G:A	rs2296053	G	A	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	791497	791498	chr9:791498:T:C	rs4740910	T	C	c	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	809368	809369	chr9:809369:C:T	rs10123602	C	T	T	Hoxd3_MA0912.1	3	1	-	9.873237625837131	9.987335376876155	TTAGACTAATTAAAGT
chr9	935447	935448	chr9:935448:G:A	rs72701042	G	A	G	Hoxd3_MA0912.1	3	1	-	7.4834253165460165	8.220106539125691	CTCCGGCAATTACACT
chr9	935452	935453	chr9:935453:G:C	rs75730606	G	C	G	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	1050980	1050981	chr9:1050981:G:T	rs7869989	G	T	T	Hoxd3_MA0912.1	13	1	-	8.724132439974564	8.119895711462192	TTGTTGTCATTAGCGT
chr9	1707683	1707684	chr9:1707684:A:C	rs12377978	A	C	C	Hoxd3_MA0912.1	11	1	+	10.922545459803684	4.177909290391355	TTGGGGTCATTAACCT
chr9	1979504	1979505	chr9:1979505:A:C	rs78776647	A	C	A	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	1994500	1994501	chr9:1994501:G:A	rs72687549	G	A	G	Hoxd3_MA0912.1	13	1	-	10.622874430816905	10.018637702304531	TTCATGTAATTAACCT
chr9	2122485	2122486	chr9:2122486:C:T	rs10733369	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr9	2132777	2132778	chr9:2132778:T:C	rs10811515	T	C	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr9	2270045	2270046	chr9:2270046:T:C	rs7023476	T	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	2303213	2303214	chr9:2303214:G:C	rs56293504	G	C	G	Hoxd3_MA0912.1	2	1	+	8.690742861876394	6.907268444182448	ATGATTCAATTACCTC
chr9	2345415	2345416	chr9:2345416:A:T	rs965782	A	T	T	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr9	2378325	2378326	chr9:2378326:T:C	rs6475754	T	C	T	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	2746144	2746145	chr9:2746145:A:G	rs78180328	A	G	A	Hoxd3_MA0912.1	0	1	+	8.572034754168122	7.251586958845818	ATGAGGTCATTAGAGT
chr9	2809992	2809993	chr9:2809993:C:T	rs530167048	C	T	C	Hoxd3_MA0912.1	29	0	+	0	0	.
chr9	2938093	2938094	chr9:2938094:T:G	rs6476128	T	G	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	4084842	4084843	chr9:4084843:A:G	rs10283708	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	4105995	4105996	chr9:4105996:G:T	rs10814845	G	T	T	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	4162452	4162453	chr9:4162453:A:G	rs10814855	A	G	A	Hoxd3_MA0912.1	12	1	-	9.151466664406	10.358218584410864	CTTGGGTAATTATTTT
chr9	4164384	4164385	chr9:4164385:T:A	rs138924053	T	A	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr9	4178972	4178973	chr9:4178973:A:T	rs10733506	A	T	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	4596134	4596135	chr9:4596135:G:C	rs301445	G	C	C	Hoxd3_MA0912.1	15	1	-	6.734650486205349	6.688345918163662	CTGGGGCAATGAGACC
chr9	4661573	4661574	chr9:4661574:C:G	rs10974716	C	G	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr9	4740539	4740540	chr9:4740540:G:A	rs1756866	G	A	G	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr9	4740544	4740545	chr9:4740545:G:A	rs10815063	G	A	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	4740556	4740557	chr9:4740557:G:T	rs188917980	G	T	G	Hoxd3_MA0912.1	4	1	+	8.674625320786156	8.070388592273783	CAGGGCTAATGACAGT
chr9	4786150	4786151	chr9:4786151:G:A	rs1202583548	G	A	G	Hoxd3_MA0912.1	12	1	-	8.690742861876394	7.483990941871531	ATGATTCAATTACCTC
chr9	4935999	4936000	chr9:4936000:C:G	rs16922337	C	G	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	5450749	5450750	chr9:5450750:A:G	rs7852887	A	G	A	Hoxd3_MA0912.1	8	1	+	8.421551498237472	1.5329790386721094	TAGAGCCAATTACCTG
chr9	5531860	5531861	chr9:5531861:A:T	rs7875503	A	T	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	5626111	5626112	chr9:5626112:A:C	rs13283193	A	C	t	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	6623930	6623931	chr9:6623931:G:A	rs10481602	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	6958505	6958506	chr9:6958506:C:G	rs10975937	C	G	G	Hoxd3_MA0912.1	2	1	-	9.299573229285972	7.516098811592025	TTGGAGCAATTATCCT
chr9	7147777	7147778	chr9:7147778:G:A	rs186357076	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr9	7267175	7267176	chr9:7267176:T:C	rs4740874	T	C	T	Hoxd3_MA0912.1	7	1	-	8.833254265866474	2.053571023236046	GTGATTTAATTACCCA
chr9	7346028	7346029	chr9:7346029:C:T	rs10511465	C	T	C	Hoxd3_MA0912.1	5	1	+	7.751220773632184	8.068542215518592	TTGGACCAATTGCAGT
chr9	7521837	7521838	chr9:7521838:T:G	rs7859919	T	G	G	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr9	7524010	7524011	chr9:7524011:G:A	rs35633583	G	A	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr9	7524041	7524042	chr9:7524042:C:T	rs10758870	C	T	T	Hoxd3_MA0912.1	12	1	+	10.022902660606713	8.816150740601849	CTGACCTAATTACTTT
chr9	7752759	7752760	chr9:7752760:T:A	rs4742402	T	A	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr9	7789827	7789828	chr9:7789828:C:T	rs55971327	C	T	C	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	7789867	7789868	chr9:7789868:T:C	rs7860863	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr9	7791732	7791733	chr9:7791733:T:C	rs9886757	T	C	T	Hoxd3_MA0912.1	7	1	-	9.739115125616854	2.959431882986426	AAGATATAATTACCCT
chr9	7869257	7869258	chr9:7869258:A:G	rs1044119982	A	G	A	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	7968027	7968028	chr9:7968028:G:A	rs12351762	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	8013158	8013159	chr9:8013159:G:T	rs9408723	G	T	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	8166669	8166670	chr9:8166670:T:C	rs149761439	T	C	T	Hoxd3_MA0912.1	8	1	-	7.077225706286001	0.1886532467206382	CAGGGGCAATGACTGT
chr9	8166690	8166691	chr9:8166691:G:A	rs7871707	G	A	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr9	8179591	8179592	chr9:8179592:G:A	rs10123017	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	8226394	8226395	chr9:8226395:C:T	rs7023436	C	T	C	Hoxd3_MA0912.1	6	1	+	7.452555655048484	9.238481603229477	TTGATGCAATTGCACC
chr9	8265604	8265605	chr9:8265605:G:A	rs77650287	G	A	G	Hoxd3_MA0912.1	15	1	-	8.152913613856883	8.930618182444892	CTGACTTCATTACTCC
chr9	8265613	8265614	chr9:8265614:A:C	rs59630983	A	C	A	Hoxd3_MA0912.1	6	1	-	8.152913613856883	1.408277444444555	CTGACTTCATTACTCC
chr9	8351538	8351539	chr9:8351539:G:C	rs10815830	G	C	G	Hoxd3_MA0912.1	29	0	-	0	0	.
chr9	8457887	8457888	chr9:8457888:T:C	rs7044709	T	C	C	Hoxd3_MA0912.1	4	1	+	9.808387700889082	8.834546518688374	ATTATGTAATTAACTT
chr9	8719365	8719366	chr9:8719366:A:T	rs906635	A	T	T	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	8752874	8752875	chr9:8752875:C:T	rs6477348	C	T	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	8764120	8764121	chr9:8764121:T:G	rs192043157	T	G	T	Hoxd3_MA0912.1	8	1	-	9.767007898564723	5.276330711797732	CTGGAATAATTAGAGT
chr9	8769371	8769372	chr9:8769372:G:A	rs7875869	G	A	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr9	8799818	8799819	chr9:8799819:C:T	rs10123595	C	T	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr9	8799834	8799835	chr9:8799835:C:G	rs115743168	C	G	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	8851462	8851463	chr9:8851463:G:T	rs2570967	G	T	T	Hoxd3_MA0912.1	29	0	-	0	0	.
chr9	8901738	8901739	chr9:8901739:A:G	rs10815990	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr9	8901757	8901758	chr9:8901758:G:C	rs1897671	G	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr9	8953932	8953933	chr9:8953933:G:T	rs10977397	G	T	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr9	9897100	9897101	chr9:9897101:T:C	rs10116104	T	C	T	Hoxd3_MA0912.1	13	1	-	8.392203913977097	7.418362731776389	TTGTTTTAATGACAGG
chr9	10600620	10600621	chr9:10600621:T:A	rs79896119	T	A	T	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	11078861	11078862	chr9:11078862:T:C	rs10959515	T	C	T	Hoxd3_MA0912.1	17	0	-	0	0	.
chr9	11186180	11186181	chr9:11186181:C:T	rs113195236	C	T	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr9	11349288	11349289	chr9:11349289:G:T	rs147777736	G	T	G	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	11495719	11495720	chr9:11495720:A:T	rs17189174	A	T	A	Hoxd3_MA0912.1	26	0	+	0	0	.
chr9	11500941	11500942	chr9:11500942:T:G	rs2083816	T	G	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	11694525	11694526	chr9:11694526:T:G	rs10960097	T	G	T	Hoxd3_MA0912.1	26	0	-	0	0	.
chr9	11966943	11966944	chr9:11966944:G:A	rs60730497	G	A	G	Hoxd3_MA0912.1	12	1	-	8.73437119769206	7.5276192776871955	CTGAGTCAATTGCTGT
chr9	12163014	12163015	chr9:12163015:A:T	rs17174901	A	T	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	12226837	12226838	chr9:12226838:T:C	rs74958358	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr9	12274209	12274210	chr9:12274210:G:T	rs2183410	G	T	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	12290309	12290310	chr9:12290310:T:C	rs12551805	T	C	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	12674530	12674531	chr9:12674531:C:G	rs13299830	C	G	C	Hoxd3_MA0912.1	16	0	+	0	0	.
chr9	12713962	12713963	chr9:12713963:G:A	rs1134311	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	12878266	12878267	chr9:12878267:T:G	rs684465	T	G	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr9	12878286	12878287	chr9:12878287:T:C	rs577334	T	C	T	Hoxd3_MA0912.1	14	1	+	9.19426917735649	9.758605623488782	CTGGGTTAATTGAATG
chr9	12882328	12882329	chr9:12882329:C:A	rs532181	C	A	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	13095318	13095319	chr9:13095319:G:C	rs74750435	G	C	G	Hoxd3_MA0912.1	29	0	+	0	0	.
chr9	13166139	13166140	chr9:13166140:T:C	rs1556421	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	13548561	13548562	chr9:13548562:A:G	rs77767334	A	G	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	13728600	13728601	chr9:13728601:A:G	rs12350251	A	G	A	Hoxd3_MA0912.1	9	1	-	8.7454164445319	1.8568439849665375	TCGAGCTAATTACTTG
chr9	13805996	13805997	chr9:13805997:T:G	rs112606360	T	G	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr9	13896129	13896130	chr9:13896130:A:G	rs10961294	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr9	13979872	13979873	chr9:13979873:C:A	rs7037099	C	A	C	Hoxd3_MA0912.1	27	0	+	0	0	.
chr9	14063190	14063191	chr9:14063191:C:T	rs192174255	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	14564286	14564287	chr9:14564287:G:A	rs10961580	G	A	G	Hoxd3_MA0912.1	14	1	+	9.443446001923796	8.499480672159663	ATTTGCTAATTACTGT
chr9	14766147	14766148	chr9:14766148:T:C	rs4740587	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr9	15138601	15138602	chr9:15138602:T:G	rs2761113	T	G	T	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr9	15207161	15207162	chr9:15207162:T:A	rs145873433	T	A	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr9	15249432	15249433	chr9:15249433:A:C	rs7874043	A	C	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	15726058	15726059	chr9:15726059:T:C	rs10962128	T	C	T	Hoxd3_MA0912.1	0	1	+	9.783497021947896	9.730991524569966	TTGAGTTCATTACTCC
chr9	15880386	15880387	chr9:15880387:T:C	rs1935221	T	C	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	15880400	15880401	chr9:15880401:A:C	rs2794626	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	16034539	16034540	chr9:16034540:G:T	rs3008706	G	T	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr9	16079375	16079376	chr9:16079376:A:G	rs1887678	A	G	A	Hoxd3_MA0912.1	7	1	+	8.628170608383797	1.84848736575337	ATGAGGTAATTAGGAT
chr9	16105595	16105596	chr9:16105596:C:T	rs73645533	C	T	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	16191259	16191260	chr9:16191260:G:T	rs4961665	G	T	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	16202989	16202990	chr9:16202990:C:T	rs7034501	C	T	C	Hoxd3_MA0912.1	25	0	-	0	0	.
chr9	16206487	16206488	chr9:16206488:G:A	rs7020562	G	A	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	16309528	16309529	chr9:16309529:C:T	rs9406618	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	16309560	16309561	chr9:16309561:A:G	rs7032123	A	G	A	Hoxd3_MA0912.1	24	0	+	0	0	.
chr9	16309566	16309567	chr9:16309567:A:G	rs9406619	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	16347524	16347525	chr9:16347525:C:T	rs4612475	C	T	T	Hoxd3_MA0912.1	0	1	+	9.958908224949575	10.011413722327505	CTGTGTCAATTAACCC
chr9	16349136	16349137	chr9:16349137:G:A	rs7030722	G	A	G	Hoxd3_MA0912.1	17	0	+	0	0	.
chr9	16458848	16458849	chr9:16458849:A:G	rs148538253	A	G	A	Hoxd3_MA0912.1	28	0	+	0	0	.
chr9	16627532	16627533	chr9:16627533:G:C	rs185106963	G	C	G	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	16728533	16728534	chr9:16728534:A:C	rs1411432	A	C	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr9	17004289	17004290	chr9:17004290:T:C	rs79476472	T	C	T	Hoxd3_MA0912.1	31	0	+	0	0	.
chr9	17291981	17291982	chr9:17291982:A:G	rs143184847	A	G	A	Hoxd3_MA0912.1	31	0	-	0	0	.
chr9	17323851	17323852	chr9:17323852:C:G	rs17761836	C	G	C	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr9	17342944	17342945	chr9:17342945:C:T	rs10963043	C	T	C	Hoxd3_MA0912.1	22	0	+	0	0	.
chr9	17367369	17367370	chr9:17367370:T:C	rs1583987	T	C	C	Hoxd3_MA0912.1	7	1	-	7.874201125680374	1.094517883049947	CTGTGGTAATGAGGCT
chr9	17533125	17533126	chr9:17533126:T:A	rs34165460	T	A	T	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	17829897	17829898	chr9:17829898:A:G	rs6475175	A	G	A	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr9	17948870	17948871	chr9:17948871:A:G	rs17185631	A	G	A	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr9	18327347	18327348	chr9:18327348:C:T	rs76624530	C	T	C	Hoxd3_MA0912.1	14	1	-	9.191356651759973	8.24739132199584	CTGGGATCATTAACGC
chr9	18447424	18447425	chr9:18447425:C:G	rs114246508	C	G	C	Hoxd3_MA0912.1	12	1	+	8.049064239190026	7.081542008250995	TTGGTGTCATTACTCA
chr9	18493412	18493413	chr9:18493413:C:T	rs77389152	C	T	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr9	18995324	18995325	chr9:18995325:C:T	rs10963898	C	T	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	19049293	19049294	chr9:19049294:G:T	rs373323498	G	T	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	19049332	19049333	chr9:19049333:C:G	chr9:19049333:C:G	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	19087197	19087198	chr9:19087198:G:A	rs7860085	G	A	G	Hoxd3_MA0912.1	14	1	-	8.722899662020687	8.158563215888396	CTATACTAATTAATCG
chr9	19119187	19119188	chr9:19119188:G:A	rs10963970	G	A	G	Hoxd3_MA0912.1	25	0	-	0	0	.
chr9	19129808	19129809	chr9:19129809:A:T	rs182334233	A	T	A	Hoxd3_MA0912.1	11	1	+	7.5483159678393035	3.2106249067452617	CTGCTCTAATGACCTC
chr9	19397504	19397505	chr9:19397505:A:G	rs7875803	A	G	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr9	19489456	19489457	chr9:19489457:A:T	rs10441703	A	T	T	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr9	19699137	19699138	chr9:19699138:T:C	rs13285718	T	C	T	Hoxd3_MA0912.1	13	1	+	8.096196671219175	8.700433399731548	TTCTGGCAATTACTGT
chr9	19700804	19700805	chr9:19700805:T:C	rs12000666	T	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr9	19919854	19919855	chr9:19919855:G:A	rs907384879	G	A	G	Hoxd3_MA0912.1	2	1	+	8.690742861876394	7.240907817719356	ATGATTCAATTACCTC
chr9	19946628	19946629	chr9:19946629:T:C	rs7869796	T	C	C	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	20255021	20255022	chr9:20255022:G:T	rs7031555	G	T	G	Hoxd3_MA0912.1	22	0	+	0	0	.
chr9	20592533	20592534	chr9:20592534:T:C	rs10964630	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr9	20908750	20908751	chr9:20908751:C:G	rs2891152	C	G	C	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	21466240	21466241	chr9:21466241:A:G	rs7038604	A	G	A	Hoxd3_MA0912.1	1	1	-	9.460201431350558	7.376140943814427	TTATGTTAATTAACCA
chr9	21503812	21503813	chr9:21503813:T:G	rs4977726	T	G	G	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr9	21543938	21543939	chr9:21543939:A:T	rs2181559	A	T	A	Hoxd3_MA0912.1	10	1	-	8.690742861876394	1.9110596192459677	ATGATTCAATTACCTC
chr9	21692017	21692018	chr9:21692018:G:A	rs10811582	G	A	A	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr9	21837205	21837206	chr9:21837206:A:G	rs6475587	A	G	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	21866500	21866501	chr9:21866501:C:T	rs2027484	C	T	T	Hoxd3_MA0912.1	4	1	+	9.160986413311546	10.134827595512254	CTCACTTAATTACCTT
chr9	22600729	22600730	chr9:22600730:A:C	rs10811746	A	C	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	23089139	23089140	chr9:23089140:G:T	rs73454582	G	T	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr9	23123107	23123108	chr9:23123108:G:C	rs10511711	G	C	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	23673662	23673663	chr9:23673663:C:T	rs4977883	C	T	T	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr9	23854465	23854466	chr9:23854466:G:A	rs151073468	G	A	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr9	23983556	23983557	chr9:23983557:T:C	rs2218806	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	25175600	25175601	chr9:25175601:G:C	rs3118325	G	C	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	25689092	25689093	chr9:25689093:C:T	rs7029919	C	T	C	Hoxd3_MA0912.1	14	1	-	7.186687549595656	6.242722219831522	AAGGACTCATTACCGG
chr9	26205695	26205696	chr9:26205696:A:G	rs2217796	A	G	A	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr9	26445138	26445139	chr9:26445139:T:C	rs74508919	T	C	t	Hoxd3_MA0912.1	1	1	+	8.690742861876394	6.606682374340266	ATGATTCAATTACCTC
chr9	26505919	26505920	chr9:26505920:T:C	rs10511790	T	C	T	Hoxd3_MA0912.1	5	1	+	9.289736456326184	8.972415014439775	TTGCATTAATTACCAG
chr9	26955577	26955578	chr9:26955578:G:T	rs761178120	G	T	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	27121907	27121908	chr9:27121908:T:C	rs586441	T	C	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr9	27203683	27203684	chr9:27203684:A:G	rs608934	A	G	A	Hoxd3_MA0912.1	0	1	-	9.173591628309394	9.121086130931463	TTCACTTAATTACACT
chr9	27203697	27203698	chr9:27203698:T:C	rs1319528	T	C	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	27665587	27665588	chr9:27665588:T:G	rs3849949	T	G	T	Hoxd3_MA0912.1	9	1	+	7.213835335400676	2.7231581486336824	GTGAGGCAATGAACCT
chr9	27997218	27997219	chr9:27997219:G:A	rs1930014	G	A	G	Hoxd3_MA0912.1	4	1	+	10.426111785204235	9.82187505669186	CTGGGCTAATTACCTA
chr9	28124181	28124182	chr9:28124182:G:A	rs1452336	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	28249744	28249745	chr9:28249745:C:A	rs12352501	C	A	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	28327564	28327565	chr9:28327565:C:T	rs6476056	C	T	T	Hoxd3_MA0912.1	4	1	-	8.674664097254682	8.070427368742308	CTATGGTAATTAAACA
chr9	28616673	28616674	chr9:28616674:A:C	rs10812853	A	C	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	28619492	28619493	chr9:28619493:A:G	rs10968680	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	28853784	28853785	chr9:28853785:C:T	rs2148784	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr9	29070446	29070447	chr9:29070447:T:C	rs60571108	T	C	T	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	29108727	29108728	chr9:29108728:G:A	rs3843930	G	A	G	Hoxd3_MA0912.1	2	1	+	9.868056662414569	8.41822161825753	CAGAGTTAATTACATG
chr9	29579801	29579802	chr9:29579802:G:A	rs554290	G	A	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	30329076	30329077	chr9:30329077:C:G	rs3853266	C	G	A	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	30435313	30435314	chr9:30435314:G:A	rs7875751	G	A	G	Hoxd3_MA0912.1	12	1	-	11.50138838289128	10.294636462886416	ATGAACTAATTACCCT
chr9	30550254	30550255	chr9:30550255:G:A	rs13302105	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	30842746	30842747	chr9:30842747:C:T	rs6476235	C	T	T	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	31054015	31054016	chr9:31054016:A:G	rs1932123	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	31098137	31098138	chr9:31098138:G:A	rs2152199	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	31140582	31140583	chr9:31140583:A:T	rs7036866	A	T	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr9	31140625	31140626	chr9:31140626:T:C	rs7022462	T	C	T	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	31149866	31149867	chr9:31149867:T:A	rs10813487	T	A	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	31492345	31492346	chr9:31492346:T:C	rs7036821	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	31598413	31598414	chr9:31598414:T:C	rs35037448	T	C	C	Hoxd3_MA0912.1	14	1	+	9.432528698271323	9.996865144403614	TTGTTTTAATGAACTT
chr9	31909170	31909171	chr9:31909171:C:T	rs2015299	C	T	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	32056298	32056299	chr9:32056299:T:C	rs12236182	T	C	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	32163519	32163520	chr9:32163520:C:A	rs10970821	C	A	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr9	32395014	32395015	chr9:32395015:C:T	rs7847742	C	T	C	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	32425911	32425912	chr9:32425912:A:G	rs3780473	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	33506302	33506303	chr9:33506303:T:C	rs10971542	T	C	T	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr9	33517535	33517536	chr9:33517536:G:C	rs10813994	G	C	.	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr9	33700436	33700437	chr9:33700437:T:G	rs143760176	T	G	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr9	33767481	33767482	chr9:33767482:A:C	rs141962378	A	C	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	33767518	33767519	chr9:33767519:A:G	rs10814045	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	34048793	34048794	chr9:34048794:G:C	rs12342186	G	C	c	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	34217077	34217078	chr9:34217078:C:T	rs4878557	C	T	T	Hoxd3_MA0912.1	29	0	+	0	0	.
chr9	34326984	34326985	chr9:34326985:A:G	rs16935533	A	G	A	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	34572816	34572817	chr9:34572817:C:T	rs1571401	C	T	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	34572826	34572827	chr9:34572827:G:C	rs1571402	G	C	C	Hoxd3_MA0912.1	14	1	-	6.977609340351053	6.801193975066607	CTGGTATCATTGCCCC
chr9	35288974	35288975	chr9:35288975:A:T	chr9:35288975:A:T	A	T	A	Hoxd3_MA0912.1	21	0	+	0	0	.
chr9	35657438	35657439	chr9:35657439:A:G	rs574243470	A	G	A	Hoxd3_MA0912.1	3	1	-	8.901839133929197	8.165157911349525	TTGTGCTCATTACTCC
chr9	36075210	36075211	chr9:36075211:A:T	rs60324607	A	T	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	36573196	36573197	chr9:36573197:C:G	chr9:36573197:C:G	C	G	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr9	36573230	36573231	chr9:36573231:A:C	rs73645803	A	C	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr9	36573936	36573937	chr9:36573937:C:T	rs77864761	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	36863768	36863769	chr9:36863769:C:T	rs76720039	C	T	G	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	36931574	36931575	chr9:36931575:G:A	rs113337021	G	A	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	36931620	36931621	chr9:36931621:G:A	rs144070616	G	A	G	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr9	36986404	36986405	chr9:36986405:C:T	rs532065152	C	T	C	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	37338787	37338788	chr9:37338788:C:T	rs308523	C	T	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	37420319	37420320	chr9:37420320:G:A	rs60485412	G	A	G	Hoxd3_MA0912.1	13	1	-	8.988609177444479	8.384372448932105	TTTTTTTAATTACCCA
chr9	37899129	37899130	chr9:37899130:T:C	rs575737060	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	37958599	37958600	chr9:37958600:T:C	rs527477155	T	C	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	38016578	38016579	chr9:38016579:C:T	rs559245984	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	38027382	38027383	chr9:38027383:C:T	rs114325719	C	T	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr9	38117649	38117650	chr9:38117650:T:C	rs10511945	T	C	T	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr9	38644335	38644336	chr9:38644336:C:T	rs151031100	C	T	c	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr9	41962881	41962882	chr9:41962882:G:A	rs62557279	G	A	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	42370293	42370294	chr9:42370294:C:T	rs1285829586	C	T	c	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr9	42384649	42384650	chr9:42384650:C:A	rs1374956297	C	A	C	Hoxd3_MA0912.1	14	1	+	9.3546714964372	8.23429080138862	CTGTGTCAATTAAACC
chr9	42428847	42428848	chr9:42428848:A:G	rs1446106986	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	43039478	43039479	chr9:43039479:G:T	rs4929623	G	T	g	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr9	61634692	61634693	chr9:61634693:G:C	rs74694569	G	C	.	Hoxd3_MA0912.1	14	1	+	9.074017230611	9.250432595895449	AAGTTTTAATTAACGC
chr9	61673314	61673315	chr9:61673315:A:G	rs34865110	A	G	.	Hoxd3_MA0912.1	1	1	-	7.88724160993509	5.803181122398961	CTGGAGCAATTGAAGT
chr9	61673334	61673335	chr9:61673335:C:T	rs12551746	C	T	.	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	62801088	62801089	chr9:62801089:T:C	rs12552831	T	C	.	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	62878296	62878297	chr9:62878297:C:T	rs373645632	C	T	.	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	65413848	65413849	chr9:65413849:G:A	rs1437759315	G	A	.	Hoxd3_MA0912.1	0	1	-	7.700784138585448	7.7532896359633785	CAGGGCTCATTAAGGT
chr9	67091586	67091587	chr9:67091587:C:T	rs3910343	C	T	c	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	67537583	67537584	chr9:67537584:G:A	rs796598795	G	A	g	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	69099776	69099777	chr9:69099777:C:T	rs10121021	C	T	C	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	69131118	69131119	chr9:69131119:C:T	rs924838210	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	69131119	69131120	chr9:69131120:T:A	rs12337103	T	A	T	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr9	69131136	69131137	chr9:69131137:G:C	rs10122932	G	C	C	Hoxd3_MA0912.1	14	1	+	8.483054259579347	8.659469624863794	CACTGATAATTAACGT
chr9	69180714	69180715	chr9:69180715:C:G	rs11145577	C	G	C	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr9	69236354	69236355	chr9:69236355:C:T	rs41316486	C	T	T	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	69564008	69564009	chr9:69564009:C:G	rs150354766	C	G	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr9	69946417	69946418	chr9:69946418:T:C	rs11140987	T	C	T	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	70079624	70079625	chr9:70079625:T:G	rs867595	T	G	T	Hoxd3_MA0912.1	16	0	+	0	0	.
chr9	70480627	70480628	chr9:70480628:A:G	rs547868343	A	G	A	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	70976064	70976065	chr9:70976065:G:C	rs2909293	G	C	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	70979940	70979941	chr9:70979941:C:T	rs3010439	C	T	C	Hoxd3_MA0912.1	5	1	+	7.586082603571024	7.903404045457432	ATGACCTCATTAGCCT
chr9	71120848	71120849	chr9:71120849:A:C	rs10868951	A	C	A	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	71191890	71191891	chr9:71191891:T:G	rs7850909	T	G	G	Hoxd3_MA0912.1	11	1	-	10.282008821326318	3.537372651913989	CAAAGGTAATTAACCT
chr9	71515369	71515370	chr9:71515370:T:G	rs10869031	T	G	G	Hoxd3_MA0912.1	4	1	+	8.472615669806025	9.0768523983184	CTGGTCTAATGACTGG
chr9	71637479	71637480	chr9:71637480:T:C	rs114670109	T	C	T	Hoxd3_MA0912.1	0	1	-	8.680548485269265	7.360100689946961	ATTGAGTAATTAAGCT
chr9	71643907	71643908	chr9:71643908:A:G	rs2087716	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	71771070	71771071	chr9:71771071:C:T	rs117455061	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	71929953	71929954	chr9:71929954:T:G	rs4601391	T	G	T	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	72015153	72015154	chr9:72015154:T:G	rs956090	T	G	g	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	72025295	72025296	chr9:72025296:A:G	rs987829794	A	G	a	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr9	72025337	72025338	chr9:72025338:G:T	rs730475	G	T	g	Hoxd3_MA0912.1	25	0	+	0	0	.
chr9	72139377	72139378	chr9:72139378:G:A	rs144191838	G	A	G	Hoxd3_MA0912.1	12	1	-	9.750375397794114	8.54362347778925	TTTAGCTAATTACGGT
chr9	72356159	72356160	chr9:72356160:G:T	rs118060322	G	T	G	Hoxd3_MA0912.1	24	0	+	0	0	.
chr9	72477850	72477851	chr9:72477851:C:T	rs6560277	C	T	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	72560131	72560132	chr9:72560132:T:G	rs7873761	T	G	T	Hoxd3_MA0912.1	23	0	-	0	0	.
chr9	72639659	72639660	chr9:72639660:C:G	rs12339588	C	G	C	Hoxd3_MA0912.1	12	1	+	10.35227707584144	9.38475484490241	TTAATGTAATTACTCT
chr9	72727426	72727427	chr9:72727427:A:C	rs2589606	A	C	A	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr9	72856967	72856968	chr9:72856968:C:T	rs78245652	C	T	-	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr9	72856968	72856969	chr9:72856969:G:A	rs34664632	G	A	-	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr9	73008097	73008098	chr9:73008098:A:C	rs2995128	A	C	C	Hoxd3_MA0912.1	12	1	-	9.077539514405622	9.316769203471456	CTGTTATAATTATTGT
chr9	73023059	73023060	chr9:73023060:T:C	rs546190473	T	C	T	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr9	73023060	73023061	chr9:73023061:G:T	rs548142608	G	T	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr9	73153571	73153572	chr9:73153572:C:T	rs182586161	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr9	73155215	73155216	chr9:73155216:A:T	rs2795113	A	T	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	73157434	73157435	chr9:73157435:C:A	rs1255811915	C	A	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	73214067	73214068	chr9:73214068:C:T	rs4363267	C	T	C	Hoxd3_MA0912.1	12	1	+	9.485151140116558	8.278399220111696	CTGGAGTCATTACAGT
chr9	73540396	73540397	chr9:73540397:G:A	rs395937	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	73540419	73540420	chr9:73540420:G:C	rs431975	G	C	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	73754905	73754906	chr9:73754906:C:A	rs921548248	C	A	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr9	75038838	75038839	chr9:75038839:A:C	rs7850614	A	C	C	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	75113238	75113239	chr9:75113239:G:T	rs11144236	G	T	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	75161577	75161578	chr9:75161578:A:T	rs11144269	A	T	a	Hoxd3_MA0912.1	10	1	-	9.398157141968984	2.6184738993385572	TTAATGTAATTAATGC
chr9	75176625	75176626	chr9:75176626:A:G	rs773006	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr9	75456993	75456994	chr9:75456994:T:C	rs10123838	T	C	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr9	75841784	75841785	chr9:75841785:A:G	rs7031123	A	G	A	Hoxd3_MA0912.1	13	1	-	8.004892783500745	8.60912951201312	TTGCGCTAATTAGTAG
chr9	76027311	76027312	chr9:76027312:C:T	rs12342299	C	T	C	Hoxd3_MA0912.1	14	1	+	7.859828563235077	7.295492117102786	ACGTGGTAATTGCCCT
chr9	76290985	76290986	chr9:76290986:G:T	rs72740933	G	T	G	Hoxd3_MA0912.1	13	1	-	8.397374945799667	7.793138217287293	CAGGCTTAATTATCTT
chr9	76307183	76307184	chr9:76307184:T:G	rs2351466	T	G	T	Hoxd3_MA0912.1	0	1	-	8.939062003703114	9.60299063826392	ATACGGTAATTAAACT
chr9	76325367	76325368	chr9:76325368:C:T	rs72743127	C	T	C	Hoxd3_MA0912.1	15	1	+	9.93384552461333	10.711550093201339	CTGATTTAATTATCTC
chr9	76526221	76526222	chr9:76526222:A:G	rs12555591	A	G	a	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	76704133	76704134	chr9:76704134:A:C	rs620476	A	C	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	76713480	76713481	chr9:76713481:T:C	rs12349122	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr9	76790016	76790017	chr9:76790017:A:G	chr9:76790017:A:G	A	G	A	Hoxd3_MA0912.1	8	1	+	9.281257664392738	2.392685204827376	CTAAGTTAATTAAGCC
chr9	76895246	76895247	chr9:76895247:T:C	rs17194596	T	C	t	Hoxd3_MA0912.1	9	1	+	7.853223225354672	0.9646507657893093	CTGTGGTCATTGCTGT
chr9	76895518	76895519	chr9:76895519:T:C	rs11145122	T	C	T	Hoxd3_MA0912.1	31	0	-	0	0	.
chr9	76895524	76895525	chr9:76895525:A:G	rs72735046	A	G	A	Hoxd3_MA0912.1	25	0	-	0	0	.
chr9	77151031	77151032	chr9:77151032:T:C	rs117230804	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	77171558	77171559	chr9:77171559:C:T	rs17723837	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	77228768	77228769	chr9:77228769:A:G	rs12343878	A	G	A	Hoxd3_MA0912.1	0	1	-	8.935857518509616	8.883352021131685	TTGGTCCAATTAAACC
chr9	77575815	77575816	chr9:77575816:G:T	rs62573428	G	T	G	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	77580490	77580491	chr9:77580491:C:G	rs1663108	C	G	C	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	77663973	77663974	chr9:77663974:T:A	rs73651592	T	A	T	Hoxd3_MA0912.1	11	1	-	8.281426804030271	3.94373574293623	GTGGGGTCATTAAACT
chr9	77854830	77854831	chr9:77854831:G:T	rs7048811	G	T	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	78262761	78262762	chr9:78262762:A:G	rs72743773	A	G	A	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	78698933	78698934	chr9:78698934:A:G	rs11790800	A	G	A	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	78868895	78868896	chr9:78868896:A:G	rs7028907	A	G	A	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	78927437	78927438	chr9:78927438:A:G	rs10780275	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr9	79382340	79382341	chr9:79382341:C:A	rs11138180	C	A	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	79572736	79572737	chr9:79572737:T:C	rs374020480	T	C	-	Hoxd3_MA0912.1	10	1	+	7.280128309882725	0.5004450672522978	TCGGGGTCATTAAAGC
chr9	80431966	80431967	chr9:80431967:A:G	rs7035967	A	G	G	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	80447983	80447984	chr9:80447984:A:G	rs12000674	A	G	A	Hoxd3_MA0912.1	3	1	-	9.08741794240122	8.35073671982155	TTGTTGTAATGAAAGT
chr9	80549491	80549492	chr9:80549492:G:A	rs1410536	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr9	80554192	80554193	chr9:80554193:A:G	rs7022798	A	G	G	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	80557861	80557862	chr9:80557862:A:G	rs10746661	A	G	A	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	80581483	80581484	chr9:80581484:T:G	rs75850424	T	G	t	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	80932804	80932805	chr9:80932805:T:C	rs11138923	T	C	T	Hoxd3_MA0912.1	1	1	+	9.579961084828161	7.495900597292032	ATTAACTAATTACACT
chr9	80948182	80948183	chr9:80948183:A:C	rs17244741	A	C	A	Hoxd3_MA0912.1	6	1	-	9.053310700222884	2.308674530810554	CTGCACTAATTATTCT
chr9	81053408	81053409	chr9:81053409:A:G	rs10512112	A	G	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr9	81105435	81105436	chr9:81105436:C:T	rs55668443	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	81399472	81399473	chr9:81399473:C:T	rs12349479	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	81531777	81531778	chr9:81531778:G:A	rs12376717	G	A	G	Hoxd3_MA0912.1	3	1	+	10.073235341851161	10.187333092890185	TTCGGTTAATTACATT
chr9	81622026	81622027	chr9:81622027:C:T	rs7856380	C	T	T	Hoxd3_MA0912.1	1	1	+	7.851912320194753	9.935972807730884	CCGAACTAATTACCTA
chr9	81687791	81687792	chr9:81687792:G:A	rs13286197	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	81687793	81687794	chr9:81687794:G:A	rs113783637	G	A	G	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr9	81687794	81687795	chr9:81687795:G:A	rs559735263	G	A	G	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr9	81734705	81734706	chr9:81734706:T:C	rs2129107	T	C	c	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr9	81826891	81826892	chr9:81826892:C:T	rs144995800	C	T	.	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	82128571	82128572	chr9:82128572:G:C	rs555430069	G	C	G	Hoxd3_MA0912.1	12	1	-	8.268299018721775	7.300776787782745	CTCAGGCAATTACCAT
chr9	82261656	82261657	chr9:82261657:C:T	rs117805583	C	T	c	Hoxd3_MA0912.1	16	0	-	0	0	.
chr9	82957354	82957355	chr9:82957355:G:A	rs116202033	G	A	G	Hoxd3_MA0912.1	30	0	-	0	0	.
chr9	82961102	82961103	chr9:82961103:G:A	rs11790068	G	A	G	Hoxd3_MA0912.1	0	1	+	7.934631512686383	9.255079308008686	GTGAGTCAATTAAACC
chr9	83032390	83032391	chr9:83032391:A:T	rs1393562	A	T	A	Hoxd3_MA0912.1	29	0	+	0	0	.
chr9	83312793	83312794	chr9:83312794:T:C	rs2031260	T	C	T	Hoxd3_MA0912.1	1	1	+	7.845901896015372	5.76184140847924	CTGACGTAATTGGTGT
chr9	83401918	83401919	chr9:83401919:G:T	rs10868004	G	T	G	Hoxd3_MA0912.1	15	1	-	9.373440958574747	8.486137763573845	CTATGCTAATTAAACC
chr9	83674544	83674545	chr9:83674545:T:C	rs7045761	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr9	84163580	84163581	chr9:84163581:T:C	rs12335395	T	C	T	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	84284241	84284242	chr9:84284242:G:C	rs74901028	G	C	G	Hoxd3_MA0912.1	14	1	-	8.345587557188834	8.169172191904387	CTTGGCCAATTATCCT
chr9	84397256	84397257	chr9:84397257:T:C	rs114296918	T	C	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr9	84709706	84709707	chr9:84709707:G:A	rs1778934	G	A	G	Hoxd3_MA0912.1	26	0	-	0	0	.
chr9	84718826	84718827	chr9:84718827:G:A	rs2489162	G	A	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	85111096	85111097	chr9:85111097:C:T	rs4877295	C	T	T	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	85237667	85237668	chr9:85237668:C:T	rs992303	C	T	T	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	85315519	85315520	chr9:85315520:A:G	rs7029815	A	G	G	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	85390000	85390001	chr9:85390001:A:G	rs11787752	A	G	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	85731404	85731405	chr9:85731405:A:G	rs62570621	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr9	86112492	86112493	chr9:86112493:G:A	rs1037551898	G	A	G	Hoxd3_MA0912.1	5	1	+	8.940457658378566	8.215894281585244	CTTTGGTAATTAGTTT
chr9	86354681	86354682	chr9:86354682:C:T	rs538411497	C	T	C	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	86354686	86354687	chr9:86354687:C:A	rs552401033	C	A	C	Hoxd3_MA0912.1	1	1	+	6.9823578470796805	7.8401821204538695	GCGGGCTAATTACTGG
chr9	86456729	86456730	chr9:86456730:C:T	rs115364111	C	T	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	86503490	86503491	chr9:86503491:A:G	rs12002204	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	86565908	86565909	chr9:86565909:C:T	rs75935033	C	T	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	86808067	86808068	chr9:86808068:G:T	rs559744889	G	T	G	Hoxd3_MA0912.1	34	0	+	0	0	.
chr9	86859954	86859955	chr9:86859955:G:A	rs58560850	G	A	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	87084069	87084070	chr9:87084070:C:T	rs11141676	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr9	87116536	87116537	chr9:87116537:C:A	rs1348561	C	A	A	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	87157497	87157498	chr9:87157498:C:A	rs277755	C	A	C	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	87406727	87406728	chr9:87406728:A:G	rs4877353	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	87577444	87577445	chr9:87577445:C:A	chr9:87577445:C:A	C	A	C	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr9	87649410	87649411	chr9:87649411:A:G	rs3118873	A	G	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	87713912	87713913	chr9:87713913:T:C	rs3128500	T	C	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr9	87817354	87817355	chr9:87817355:G:C	rs13283130	G	C	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr9	88193666	88193667	chr9:88193667:G:T	rs4877127	G	T	T	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	88253076	88253077	chr9:88253077:A:G	rs7859843	A	G	-	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	88313665	88313666	chr9:88313666:A:G	rs59338559	A	G	A	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr9	88645646	88645647	chr9:88645647:C:T	rs17054265	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr9	88698343	88698344	chr9:88698344:G:A	rs9410242	G	A	A	Hoxd3_MA0912.1	7	1	-	8.898891608720383	4.093150732270477	TTGTACTCATTACAGT
chr9	88747331	88747332	chr9:88747332:G:T	rs28517748	G	T	G	Hoxd3_MA0912.1	4	1	+	8.285406433713684	7.6811697052013095	GCGAGGTAATTACACT
chr9	88747355	88747356	chr9:88747356:G:A	rs145821518	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr9	88803826	88803827	chr9:88803827:T:C	rs17054506	T	C	T	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	88915489	88915490	chr9:88915490:C:A	rs13284698	C	A	A	Hoxd3_MA0912.1	27	0	+	0	0	.
chr9	88915497	88915498	chr9:88915498:T:C	rs13297660	T	C	C	Hoxd3_MA0912.1	35	0	+	0	0	.
chr9	89073361	89073362	chr9:89073362:A:G	rs114265048	A	G	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	89463602	89463603	chr9:89463603:G:C	rs4877094	G	C	G	Hoxd3_MA0912.1	31	0	+	0	0	.
chr9	89463606	89463607	chr9:89463607:A:T	rs11265910	A	T	A	Hoxd3_MA0912.1	35	0	+	0	0	.
chr9	89465054	89465055	chr9:89465055:C:T	rs60216137	C	T	C	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	89567172	89567173	chr9:89567173:A:G	rs7022862	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr9	89648433	89648434	chr9:89648434:G:A	rs11265853	G	A	A	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	89675227	89675228	chr9:89675228:C:T	rs375712770	C	T	C	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr9	89675241	89675242	chr9:89675242:G:A	rs1209348394	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr9	89809171	89809172	chr9:89809172:G:A	rs9777581	G	A	A	Hoxd3_MA0912.1	26	0	-	0	0	.
chr9	90538282	90538283	chr9:90538283:A:G	rs7852932	A	G	A	Hoxd3_MA0912.1	23	0	-	0	0	.
chr9	90601348	90601349	chr9:90601349:C:T	rs10993606	C	T	C	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr9	90639080	90639081	chr9:90639081:C:G	rs898606	C	G	.	Hoxd3_MA0912.1	4	1	-	9.36533589122659	7.787257980513509	TAAAGCTAATTAATGT
chr9	90801253	90801254	chr9:90801254:A:G	rs290986	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr9	90905296	90905297	chr9:90905297:G:A	rs1585460	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	90992523	90992524	chr9:90992524:T:G	rs7859976	T	G	G	Hoxd3_MA0912.1	8	1	-	9.219160575815605	4.7284833890486135	TTGAATTCATTAACTC
chr9	90992546	90992547	chr9:90992547:A:C	rs296733	A	C	C	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr9	91026543	91026544	chr9:91026544:T:C	rs148811137	T	C	T	Hoxd3_MA0912.1	1	1	+	8.401720823009791	6.317660335473661	ATGAGACAATTACACC
chr9	91138876	91138877	chr9:91138877:T:G	rs7033430	T	G	G	Hoxd3_MA0912.1	4	1	+	10.399114546033841	11.003351274546215	TTGGTATAATTAATTT
chr9	91487447	91487448	chr9:91487448:G:T	rs56975675	G	T	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	91880094	91880095	chr9:91880095:T:C	rs11795340	T	C	T	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr9	92385720	92385721	chr9:92385721:G:A	rs375943971	G	A	G	Hoxd3_MA0912.1	-14	0	+	0	0	.
chr9	92686098	92686099	chr9:92686099:A:C	rs10992414	A	C	a	Hoxd3_MA0912.1	1	1	-	10.089280494901098	8.005220007364967	TTTTTTTAATTAACTT
chr9	92749700	92749701	chr9:92749701:C:T	chr9:92749701:C:T	C	T	C	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr9	93060926	93060927	chr9:93060927:G:C	rs76641041	G	C	G	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	93278491	93278492	chr9:93278492:C:T	rs140204243	C	T	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	93333089	93333090	chr9:93333090:T:C	rs35383386	T	C	T	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	93435665	93435666	chr9:93435666:A:G	rs191956996	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	93574507	93574508	chr9:93574508:T:A	rs10429558	T	A	A	Hoxd3_MA0912.1	10	1	+	8.21927162721025	1.439588384579824	ATGTAGTAATTGCCAT
chr9	93863687	93863688	chr9:93863688:C:G	rs10821240	C	G	C	Hoxd3_MA0912.1	13	1	+	8.367036178092365	6.7889582673792805	ATTCGCTAATTACCAT
chr9	93863692	93863693	chr9:93863693:A:C	rs73651930	A	C	A	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	93974421	93974422	chr9:93974422:G:A	rs1933670	G	A	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	95026996	95026997	chr9:95026997:C:T	rs143799297	C	T	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr9	95048389	95048390	chr9:95048390:A:G	rs529048943	A	G	A	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	95080196	95080197	chr9:95080197:T:G	rs17679141	T	G	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	95198499	95198500	chr9:95198500:G:A	rs356680	G	A	G	Hoxd3_MA0912.1	25	0	+	0	0	.
chr9	95620814	95620815	chr9:95620815:A:G	rs7860540	A	G	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	95719240	95719241	chr9:95719241:G:A	rs1967900	G	A	G	Hoxd3_MA0912.1	27	0	-	0	0	.
chr9	95748855	95748856	chr9:95748856:T:C	rs700965	T	C	C	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	95887884	95887885	chr9:95887885:A:G	rs56063686	A	G	A	Hoxd3_MA0912.1	32	0	-	0	0	.
chr9	96019725	96019726	chr9:96019726:C:A	rs690601	C	A	C	Hoxd3_MA0912.1	35	0	-	0	0	.
chr9	96064091	96064092	chr9:96064092:G:C	rs76115912	G	C	G	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr9	96311074	96311075	chr9:96311075:G:C	rs1983951	G	C	C	Hoxd3_MA0912.1	0	1	-	10.6967125111575	8.71233608127439	CTGAGTCAATTAAACT
chr9	96323080	96323081	chr9:96323081:A:C	rs10126039	A	C	C	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr9	96470435	96470436	chr9:96470436:C:G	rs149221272	C	G	C	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	98240351	98240352	chr9:98240352:T:A	rs7853312	T	A	A	Hoxd3_MA0912.1	15	1	+	9.380713756237933	7.715705992649022	TTGCTGTAATTACTAT
chr9	98469609	98469610	chr9:98469610:A:G	rs2779531	A	G	A	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	98476155	98476156	chr9:98476156:T:C	rs16916353	T	C	T	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	98505575	98505576	chr9:98505576:G:A	rs10986472	G	A	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr9	98537062	98537063	chr9:98537063:C:T	rs7873040	C	T	C	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	98555638	98555639	chr9:98555639:C:T	rs2900512	C	T	T	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	98864626	98864627	chr9:98864627:T:C	rs7849093	T	C	C	Hoxd3_MA0912.1	13	1	-	8.838664071661606	7.864822889460898	ATGGACTAATTACAAG
chr9	98871221	98871222	chr9:98871222:G:T	rs13283283	G	T	G	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	98871247	98871248	chr9:98871248:T:C	rs13289251	T	C	C	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	99049839	99049840	chr9:99049840:C:G	rs79823899	C	G	C	Hoxd3_MA0912.1	5	1	+	8.014535938928296	8.203062272609133	TTGTTCTCATTACCCA
chr9	99172008	99172009	chr9:99172009:T:C	rs184709725	T	C	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	99176747	99176748	chr9:99176748:G:A	rs192791699	G	A	G	Hoxd3_MA0912.1	21	0	-	0	0	.
chr9	99273555	99273556	chr9:99273556:T:G	rs790191	T	G	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr9	99489896	99489897	chr9:99489897:T:C	rs2416764	T	C	T	Hoxd3_MA0912.1	1	1	-	9.704246512127968	8.846422238753776	TAGATTTAATTACAGG
chr9	101030326	101030327	chr9:101030327:G:A	rs11999302	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	101338600	101338601	chr9:101338601:A:G	rs4742811	A	G	G	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr9	101508981	101508982	chr9:101508982:C:T	rs72743392	C	T	C	Hoxd3_MA0912.1	13	1	+	7.873972732614806	7.269736004102434	TTGTGGCAATTGCCGG
chr9	101508982	101508983	chr9:101508983:G:A	rs3903804	G	A	G	Hoxd3_MA0912.1	14	1	+	7.873972732614806	6.9300074028506735	TTGTGGCAATTGCCGG
chr9	102427092	102427093	chr9:102427093:A:C	rs10990081	A	C	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	102470622	102470623	chr9:102470623:A:C	rs4644318	A	C	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	102550452	102550453	chr9:102550453:G:A	rs75205438	G	A	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	102830000	102830001	chr9:102830001:T:C	rs843259	T	C	T	Hoxd3_MA0912.1	0	1	+	7.839266854501165	7.786761357123234	TTGTGCCAATTAGCCA
chr9	103026038	103026039	chr9:103026039:T:C	rs35353928	T	C	T	Hoxd3_MA0912.1	12	1	-	9.815301807719292	8.847779576780262	TATAGTTAATTAATGT
chr9	103853143	103853144	chr9:103853144:T:C	rs10990957	T	C	T	Hoxd3_MA0912.1	3	1	-	7.934631512686383	7.82053376164736	GTGAGTCAATTAAACC
chr9	104280472	104280473	chr9:104280473:A:G	rs138209947	A	G	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	104606450	104606451	chr9:104606451:G:C	rs114964366	G	C	G	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	104773210	104773211	chr9:104773211:A:G	rs28379689	A	G	A	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	105053400	105053401	chr9:105053401:G:C	rs2102121	G	C	G	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr9	105079359	105079360	chr9:105079360:C:T	rs73517999	C	T	C	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	105347203	105347204	chr9:105347204:T:C	rs80242696	T	C	T	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr9	105416983	105416984	chr9:105416984:C:T	rs10125150	C	T	C	Hoxd3_MA0912.1	2	1	+	9.494201538552323	9.960485386695527	TTCTGGTAATTACATT
chr9	105430196	105430197	chr9:105430197:T:G	rs16924617	T	G	T	Hoxd3_MA0912.1	10	1	+	9.089974070410667	7.116031704230149	CTGGCCTAATTATAGT
chr9	106109146	106109147	chr9:106109147:T:C	rs932163	T	C	T	Hoxd3_MA0912.1	35	0	+	0	0	.
chr9	106283725	106283726	chr9:106283726:G:A	rs12344579	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	106503060	106503061	chr9:106503061:C:A	rs149836790	C	A	C	Hoxd3_MA0912.1	16	0	-	0	0	.
chr9	106905386	106905387	chr9:106905387:G:T	rs72741794	G	T	G	Hoxd3_MA0912.1	2	1	+	7.530332251909558	6.213141682358813	TTGTGCTCATTGGCCT
chr9	107293407	107293408	chr9:107293408:G:A	rs7038659	G	A	G	Hoxd3_MA0912.1	4	1	+	9.209306325326436	8.605069596814063	AAGAGTTAATTATTGT
chr9	107720389	107720390	chr9:107720390:G:A	rs146852099	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	107780971	107780972	chr9:107780972:T:C	chr9:107780972:T:C	T	C	T	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	108814272	108814273	chr9:108814273:G:A	rs574108082	G	A	G	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	108860694	108860695	chr9:108860695:G:A	rs11794127	G	A	G	Hoxd3_MA0912.1	-2	0	+	0	0	.
chr9	109183264	109183265	chr9:109183265:C:T	rs142871474	C	T	A	Hoxd3_MA0912.1	-3	0	+	0	0	.
chr9	109183292	109183293	chr9:109183293:T:C	rs112799892	T	C	T	Hoxd3_MA0912.1	25	0	+	0	0	.
chr9	109188784	109188785	chr9:109188785:C:G	rs17729759	C	G	C	Hoxd3_MA0912.1	31	0	-	0	0	.
chr9	109304387	109304388	chr9:109304388:A:G	rs10979814	A	G	G	Hoxd3_MA0912.1	4	1	-	8.886945932760554	7.9131047505598495	TTGGTTTAATTGGAGT
chr9	109345542	109345543	chr9:109345543:C:A	rs972776	C	A	C	Hoxd3_MA0912.1	6	1	+	7.4947545232590365	4.942989410345988	TAGGGACAATTACCCA
chr9	109477362	109477363	chr9:109477363:C:T	rs75862441	C	T	C	Hoxd3_MA0912.1	-13	0	-	0	0	.
chr9	109477641	109477642	chr9:109477642:C:T	rs117106439	C	T	C	Hoxd3_MA0912.1	-5	0	+	0	0	.
chr9	109477648	109477649	chr9:109477649:G:A	rs376239888	G	A	G	Hoxd3_MA0912.1	2	1	+	9.21739895661633	7.767563912459291	CTGGGTTAATTATTAG
chr9	109525660	109525661	chr9:109525661:T:A	rs4978821	T	A	T	Hoxd3_MA0912.1	27	0	-	0	0	.
chr9	109560554	109560555	chr9:109560555:C:T	rs10979928	C	T	C	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr9	109560576	109560577	chr9:109560577:G:A	rs12379137	G	A	G	Hoxd3_MA0912.1	21	0	+	0	0	.
chr9	109560586	109560587	chr9:109560587:A:G	rs142505549	A	G	A	Hoxd3_MA0912.1	31	0	+	0	0	.
chr9	109569210	109569211	chr9:109569211:T:C	rs7042569	T	C	C	Hoxd3_MA0912.1	27	0	-	0	0	.
chr9	109716749	109716750	chr9:109716750:G:C	rs240	G	C	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	109731059	109731060	chr9:109731060:C:A	rs74713271	C	A	C	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	109731079	109731080	chr9:109731080:T:G	rs2479312	T	G	T	Hoxd3_MA0912.1	0	1	+	9.386046173572595	7.349164246311554	TTAAACTAATTACACC
chr9	109896291	109896292	chr9:109896292:A:G	rs62578146	A	G	A	Hoxd3_MA0912.1	22	0	+	0	0	.
chr9	109896299	109896300	chr9:109896300:C:A	rs111626747	C	A	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	110006911	110006912	chr9:110006912:A:G	rs74778850	A	G	A	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	110130955	110130956	chr9:110130956:A:G	rs10980215	A	G	A	Hoxd3_MA0912.1	6	1	-	8.839353262480268	7.053427314299274	TTGGCATAATTAAGGT
chr9	110191328	110191329	chr9:110191329:C:T	rs114230453	C	T	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	110238331	110238332	chr9:110238332:A:C	rs79572934	A	C	A	Hoxd3_MA0912.1	3	1	-	9.132992536992365	9.583231232085634	TTGTGATAATTATACC
chr9	110366841	110366842	chr9:110366842:G:T	rs10114269	G	T	.	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	110556358	110556359	chr9:110556359:C:T	rs138366915	C	T	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	110556384	110556385	chr9:110556385:G:A	rs1931309	G	A	G	Hoxd3_MA0912.1	18	0	+	0	0	.
chr9	110573801	110573802	chr9:110573802:A:G	rs7867228	A	G	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	110660311	110660312	chr9:110660312:A:C	rs3010806	A	C	A	Hoxd3_MA0912.1	15	1	-	9.77588765636083	8.951878519731135	CTGTCTTAATTAAATT
chr9	110914478	110914479	chr9:110914479:A:G	rs62573185	A	G	A	Hoxd3_MA0912.1	0	1	+	8.690742861876394	7.370295066554092	ATGATTCAATTAACTC
chr9	111038754	111038755	chr9:111038755:G:A	rs575127571	G	A	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	111038791	111038792	chr9:111038792:G:A	rs1032001798	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	111252551	111252552	chr9:111252552:T:C	rs112014566	T	C	T	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	111337709	111337710	chr9:111337710:C:T	rs72607191	C	T	C	Hoxd3_MA0912.1	17	0	-	0	0	.
chr9	111485553	111485554	chr9:111485554:A:G	rs113008234	A	G	A	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	111744608	111744609	chr9:111744609:C:G	rs150228892	C	G	C	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr9	111874089	111874090	chr9:111874090:T:C	rs7037742	T	C	T	Hoxd3_MA0912.1	14	1	+	7.1592214726889765	7.723557918821267	CTGGGACAATTGACTG
chr9	112032940	112032941	chr9:112032941:C:T	rs139443756	C	T	C	Hoxd3_MA0912.1	11	1	-	8.033086015120226	9.819011963301218	TTTGTCTAATTGGCCT
chr9	112102453	112102454	chr9:112102454:C:G	rs4979082	C	G	C	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	112172759	112172760	chr9:112172760:G:A	rs7043510	G	A	G	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	112183209	112183210	chr9:112183210:T:C	rs6477884	T	C	t	Hoxd3_MA0912.1	1	1	+	7.934631512686383	5.850571025150252	GTGAGTCAATTAAACC
chr9	112536049	112536050	chr9:112536050:C:T	rs62568562	C	T	C	Hoxd3_MA0912.1	0	1	+	8.953138375843634	9.005643873221565	CTCTGTTAATTGACCT
chr9	112572007	112572008	chr9:112572008:G:T	rs2593681	G	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr9	113563218	113563219	chr9:113563219:C:T	rs883025	C	T	T	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr9	113946615	113946616	chr9:113946616:A:G	rs11788091	A	G	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	114011324	114011325	chr9:114011325:G:A	rs17793015	G	A	G	Hoxd3_MA0912.1	0	1	-	7.83807004109288	7.890575538470811	CCTGGGTAATTAAAGG
chr9	114026973	114026974	chr9:114026974:A:T	rs77198048	A	T	A	Hoxd3_MA0912.1	-4	0	+	0	0	.
chr9	114207834	114207835	chr9:114207835:G:A	rs10982100	G	A	G	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	114317223	114317224	chr9:114317224:T:A	rs76870658	T	A	T	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	114449487	114449488	chr9:114449488:G:A	rs4979393	G	A	G	Hoxd3_MA0912.1	5	1	+	7.634398703453539	6.9098353266602155	TTGGCGCAATTACCAC
chr9	114483907	114483908	chr9:114483908:G:A	rs11789406	G	A	G	Hoxd3_MA0912.1	-17	0	-	0	0	.
chr9	114505788	114505789	chr9:114505789:C:T	rs971369544	C	T	C	Hoxd3_MA0912.1	21	0	+	0	0	.
chr9	114587120	114587121	chr9:114587121:G:A	rs943843	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	114642185	114642186	chr9:114642186:C:A	rs141344581	C	A	C	Hoxd3_MA0912.1	25	0	+	0	0	.
chr9	114865288	114865289	chr9:114865289:G:T	rs7866342	G	T	T	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	115022873	115022874	chr9:115022874:G:A	rs72758630	G	A	g	Hoxd3_MA0912.1	33	0	-	0	0	.
chr9	115380789	115380790	chr9:115380790:C:T	rs6478161	C	T	T	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr9	115517837	115517838	chr9:115517838:T:C	rs75176229	T	C	T	Hoxd3_MA0912.1	-18	0	-	0	0	.
chr9	115650064	115650065	chr9:115650065:C:T	rs115081116	C	T	C	Hoxd3_MA0912.1	13	1	-	7.976027652317959	8.949868834518666	ATGAGGTAATTGCGGC
chr9	116055623	116055624	chr9:116055624:T:G	rs1314016	T	G	T	Hoxd3_MA0912.1	1	1	+	9.60824495406333	7.524184466527203	ATGCTGTAATTAATGT
chr9	116088182	116088183	chr9:116088183:A:G	rs112034721	A	G	A	Hoxd3_MA0912.1	17	0	+	0	0	.
chr9	116608442	116608443	chr9:116608443:G:C	rs2416565	G	C	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	116623044	116623045	chr9:116623045:A:G	rs16933755	A	G	A	Hoxd3_MA0912.1	16	0	-	0	0	.
chr9	116757308	116757309	chr9:116757309:G:A	rs1372330	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	117278638	117278639	chr9:117278639:T:A	rs7875463	T	A	T	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	117343740	117343741	chr9:117343741:A:G	rs72764170	A	G	A	Hoxd3_MA0912.1	13	1	-	10.210934206871254	10.815170935383629	TAGAACTAATTAATGT
chr9	117488113	117488114	chr9:117488114:C:T	rs1316439	C	T	T	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr9	117707775	117707776	chr9:117707776:A:G	rs1927911	A	G	A	Hoxd3_MA0912.1	-1	0	-	0	0	.
chr9	117720661	117720662	chr9:117720662:T:C	rs7846989	T	C	T	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	118059746	118059747	chr9:118059747:G:A	rs930286807	G	A	G	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	118466942	118466943	chr9:118466943:A:G	rs71507551	A	G	A	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	119420302	119420303	chr9:119420303:T:G	rs10123958	T	G	G	Hoxd3_MA0912.1	-19	0	-	0	0	.
chr9	119572440	119572441	chr9:119572441:G:A	rs1468643	G	A	G	Hoxd3_MA0912.1	-11	0	-	0	0	.
chr9	120107893	120107894	chr9:120107894:G:T	rs146328987	G	T	G	Hoxd3_MA0912.1	12	1	-	7.9723982150777335	7.9723982150777335	ATCTGGTAATGACCCT
chr9	120580482	120580483	chr9:120580483:C:A	rs777085538	C	A	C	Hoxd3_MA0912.1	3	1	-	9.111556811286446	8.66131811619318	TTGGGGTCATTATTCT
chr9	120587420	120587421	chr9:120587421:G:A	rs17343890	G	A	G	Hoxd3_MA0912.1	17	0	-	0	0	.
chr9	120647585	120647586	chr9:120647586:T:C	rs10984972	T	C	T	Hoxd3_MA0912.1	0	1	+	8.177100542070997	8.124595044693066	TTGGTATAATTGCAGG
chr9	120921300	120921301	chr9:120921301:C:G	rs1008383	C	G	G	Hoxd3_MA0912.1	-16	0	+	0	0	.
chr9	121058213	121058214	chr9:121058214:T:C	rs6478496	T	C	C	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	121139268	121139269	chr9:121139269:G:A	rs1011928884	G	A	G	Hoxd3_MA0912.1	19	0	+	0	0	.
chr9	121642734	121642735	chr9:121642735:C:T	rs34767300	C	T	C	Hoxd3_MA0912.1	-10	0	+	0	0	.
chr9	121720415	121720416	chr9:121720416:T:A	rs34761090	T	A	T	Hoxd3_MA0912.1	14	1	+	10.950845777168285	10.394801528251994	CTGGAATAATTAACTT
chr9	122013132	122013133	chr9:122013133:T:C	rs57233960	T	C	C	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	122020709	122020710	chr9:122020710:G:A	rs13298112	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	122135070	122135071	chr9:122135071:G:A	rs7864623	G	A	G	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr9	122142427	122142428	chr9:122142428:C:T	rs1556216	C	T	C	Hoxd3_MA0912.1	14	1	-	8.255406632083787	7.311441302319652	CTGTTGTAATTGGTGT
chr9	122142450	122142451	chr9:122142451:C:T	rs1556217	C	T	C	Hoxd3_MA0912.1	-9	0	-	0	0	.
chr9	122379427	122379428	chr9:122379428:T:C	rs10306141	T	C	T	Hoxd3_MA0912.1	-15	0	-	0	0	.
chr9	122846347	122846348	chr9:122846348:T:C	rs10818754	T	C	T	Hoxd3_MA0912.1	24	0	+	0	0	.
chr9	123046581	123046582	chr9:123046582:C:A	rs12379685	C	A	C	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	123334358	123334359	chr9:123334359:T:C	rs7034840	T	C	t	Hoxd3_MA0912.1	17	0	-	0	0	.
chr9	123569110	123569111	chr9:123569111:G:A	rs111298867	G	A	G	Hoxd3_MA0912.1	15	1	+	8.46744680527409	7.626448178314874	AAGCATTAATTACCCG
chr9	123569122	123569123	chr9:123569123:T:C	rs567695425	T	C	T	Hoxd3_MA0912.1	27	0	+	0	0	.
chr9	123637812	123637813	chr9:123637813:T:C	rs1475528	T	C	T	Hoxd3_MA0912.1	8	1	-	7.304439519429042	0.4158670598636786	TTGTTGCCATTACCCC
chr9	123655060	123655061	chr9:123655061:C:T	rs7852243	C	T	T	Hoxd3_MA0912.1	3	1	-	9.288891962371004	9.402989713410028	CAGGAGTAATTACAAT
chr9	124055159	124055160	chr9:124055160:G:A	rs149638631	G	A	G	Hoxd3_MA0912.1	28	0	+	0	0	.
chr9	124172643	124172644	chr9:124172644:C:T	rs10818927	C	T	C	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	124659000	124659001	chr9:124659001:T:G	chr9:124659001:T:G	T	G	T	Hoxd3_MA0912.1	10	1	+	9.800258456034493	7.826316089853975	TTTAGATAATTAATTT
chr9	124696188	124696189	chr9:124696189:G:A	rs6478680	G	A	A	Hoxd3_MA0912.1	-10	0	-	0	0	.
chr9	124724616	124724617	chr9:124724617:G:A	rs10986410	G	A	A	Hoxd3_MA0912.1	14	1	-	8.792401488142591	8.2280650420103	TACAAGTAATTACACT
chr9	124769822	124769823	chr9:124769823:G:T	chr9:124769823:G:T	G	T	G	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	124769845	124769846	chr9:124769846:C:T	rs567832364	C	T	C	Hoxd3_MA0912.1	5	1	-	8.532177487101418	7.807614110308096	CTGGAGCAATTAGCGC
chr9	125241462	125241463	chr9:125241463:G:A	rs1421817160	G	A	G	Hoxd3_MA0912.1	-16	0	-	0	0	.
chr9	125749226	125749227	chr9:125749227:C:T	rs7026440	C	T	C	Hoxd3_MA0912.1	26	0	+	0	0	.
chr9	125890359	125890360	chr9:125890360:T:C	rs12237488	T	C	C	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr9	125993936	125993937	chr9:125993937:T:G	rs12238283	T	G	T	Hoxd3_MA0912.1	7	1	-	7.8666853814575415	5.8927430152770235	CAGGCCTAATTATCCC
chr9	125993950	125993951	chr9:125993951:G:A	rs79675286	G	A	G	Hoxd3_MA0912.1	-7	0	-	0	0	.
chr9	126024529	126024530	chr9:126024530:G:A	rs34961104	G	A	G	Hoxd3_MA0912.1	31	0	-	0	0	.
chr9	126234134	126234135	chr9:126234135:C:T	rs78022800	C	T	C	Hoxd3_MA0912.1	31	0	+	0	0	.
chr9	126380962	126380963	chr9:126380963:A:G	rs917778	A	G	G	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	126403210	126403211	chr9:126403211:C:G	rs142808756	C	G	C	Hoxd3_MA0912.1	28	0	-	0	0	.
chr9	126421357	126421358	chr9:126421358:A:G	rs7024512	A	G	G	Hoxd3_MA0912.1	20	0	+	0	0	.
chr9	126506716	126506717	chr9:126506717:G:A	rs1009397016	G	A	G	Hoxd3_MA0912.1	33	0	+	0	0	.
chr9	126724447	126724448	chr9:126724448:A:T	rs78400806	A	T	A	Hoxd3_MA0912.1	9	1	-	8.170908095774626	3.680230909007635	CTTGGGTCATTAAACC
chr9	126902859	126902860	chr9:126902860:C:T	rs13293831	C	T	C	Hoxd3_MA0912.1	2	1	+	7.643452914243317	8.10973676238652	CTCAGGCAATTAGCCC
chr9	127048910	127048911	chr9:127048911:A:G	rs62580844	A	G	A	Hoxd3_MA0912.1	32	0	+	0	0	.
chr9	127132259	127132260	chr9:127132260:C:T	rs527909453	C	T	C	Hoxd3_MA0912.1	-7	0	+	0	0	.
chr9	127170736	127170737	chr9:127170737:C:A	rs1028866	C	A	C	Hoxd3_MA0912.1	-8	0	+	0	0	.
chr9	127503808	127503809	chr9:127503809:G:A	rs2245461	G	A	G	Hoxd3_MA0912.1	-20	0	-	0	0	.
chr9	127776282	127776283	chr9:127776283:C:T	rs61066732	C	T	T	Hoxd3_MA0912.1	-8	0	-	0	0	.
chr9	128255454	128255455	chr9:128255455:G:A	rs74885572	G	A	g	Hoxd3_MA0912.1	-14	0	-	0	0	.
chr9	129092504	129092505	chr9:129092505:A:G	rs115135989	A	G	A	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr9	129092505	129092506	chr9:129092506:C:T	rs116667948	C	T	C	Hoxd3_MA0912.1	-12	0	+	0	0	.
chr9	129274899	129274900	chr9:129274900:C:T	rs7865568	C	T	T	Hoxd3_MA0912.1	-13	0	+	0	0	.
chr9	129384024	129384025	chr9:129384025:C:G	rs114943557	C	G	C	Hoxd3_MA0912.1	0	1	+	6.727430163508113	4.743053733625003	CCGCGTTCATTACCGG
chr9	129427202	129427203	chr9:129427203:G:T	rs79385872	G	T	g	Hoxd3_MA0912.1	19	0	-	0	0	.
chr9	129488336	129488337	chr9:129488337:G:A	rs914650597	G	A	g	Hoxd3_MA0912.1	1	1	+	7.848384499836246	8.706208773210438	CGGCGGTAATTAAAAT
chr9	129488341	129488342	chr9:129488342:T:G	chr9:129488342:T:G	T	G	T	Hoxd3_MA0912.1	6	1	+	7.848384499836246	1.1037483304239175	CGGCGGTAATTAAAAT
chr9	129680971	129680972	chr9:129680972:G:A	rs7862417	G	A	A	Hoxd3_MA0912.1	4	1	-	9.547500359726744	10.521341541927452	ATGTCGTAATTAATCT
chr9	129777268	129777269	chr9:129777269:C:T	rs570360582	C	T	C	Hoxd3_MA0912.1	-4	0	-	0	0	.
chr9	129777269	129777270	chr9:129777270:G:A	rs538644756	G	A	G	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	129861013	129861014	chr9:129861014:C:T	rs1503375	C	T	C	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr9	130149825	130149826	chr9:130149826:T:C	rs7866942	T	C	C	Hoxd3_MA0912.1	-19	0	+	0	0	.
chr9	130149870	130149871	chr9:130149871:G:A	rs12347960	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr9	130173577	130173578	chr9:130173578:T:A	rs186245617	T	A	T	Hoxd3_MA0912.1	4	1	-	7.170970257002969	7.170970257002969	CTGGACCCATTACCAT
chr9	130226130	130226131	chr9:130226131:G:T	rs111416451	G	T	G	Hoxd3_MA0912.1	-15	0	+	0	0	.
chr9	130251304	130251305	chr9:130251305:T:C	rs13297981	T	C	T	Hoxd3_MA0912.1	1	1	+	9.48169437966377	7.397633892127638	CTGGGGTCATTAACTG
chr9	130251333	130251334	chr9:130251334:A:C	rs7030081	A	C	A	Hoxd3_MA0912.1	30	0	+	0	0	.
chr9	130288830	130288831	chr9:130288831:T:C	rs947510	T	C	C	Hoxd3_MA0912.1	8	1	-	9.450651870310512	2.562079410745149	TTCCTTTAATTACCCT
chr9	130787153	130787154	chr9:130787154:C:T	rs12338083	C	T	C	Hoxd3_MA0912.1	15	1	-	7.655868149102692	6.814869522143476	CTGGGGCAATGACACG
chr9	130815600	130815601	chr9:130815601:G:A	rs34358097	G	A	G	Hoxd3_MA0912.1	26	0	+	0	0	.
chr9	130939803	130939804	chr9:130939804:C:G	rs137917488	C	G	C	Hoxd3_MA0912.1	30	0	-	0	0	.
chr9	130939845	130939846	chr9:130939846:C:A	rs12346730	C	A	C	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	131039427	131039428	chr9:131039428:T:A	rs2293519	T	A	A	Hoxd3_MA0912.1	12	1	-	8.322783624235012	7.1160317042301475	CTGGTCTCATTAAGGT
chr9	131043774	131043775	chr9:131043775:C:T	rs7869110	C	T	t	Hoxd3_MA0912.1	-12	0	-	0	0	.
chr9	131085839	131085840	chr9:131085840:G:A	rs4740214	G	A	G	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	131415305	131415306	chr9:131415306:G:A	rs2966353	G	A	G	Hoxd3_MA0912.1	13	1	-	9.203097005582837	8.598860277070465	TTGAGTCAATGAACGT
chr9	131554135	131554136	chr9:131554136:T:C	rs35943903	T	C	T	Hoxd3_MA0912.1	8	1	-	8.243295663687398	1.3547232041220338	CTGAACCAATTAGATT
chr9	131635998	131635999	chr9:131635999:T:C	rs4474069	T	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr9	131820272	131820273	chr9:131820273:A:G	rs3012767	A	G	A	Hoxd3_MA0912.1	-1	0	+	0	0	.
chr9	131983064	131983065	chr9:131983065:A:G	rs35107878	A	G	A	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr9	131983094	131983095	chr9:131983095:C:T	rs7032884	C	T	C	Hoxd3_MA0912.1	13	1	+	8.728945804565615	8.124709076053241	CTCATGTAATTAACGA
chr9	132183855	132183856	chr9:132183856:T:C	rs760220558	T	C	T	Hoxd3_MA0912.1	17	0	+	0	0	.
chr9	132261090	132261091	chr9:132261091:T:A	rs113309015	T	A	T	Hoxd3_MA0912.1	34	0	-	0	0	.
chr9	132261127	132261128	chr9:132261128:A:C	rs58201882	A	C	C	Hoxd3_MA0912.1	-3	0	-	0	0	.
chr9	132591338	132591339	chr9:132591339:T:C	rs11243835	T	C	T	Hoxd3_MA0912.1	30	0	-	0	0	.
chr9	132745603	132745604	chr9:132745604:C:T	rs73659470	C	T	C	Hoxd3_MA0912.1	-6	0	+	0	0	.
chr9	132745612	132745613	chr9:132745613:A:G	rs10125615	A	G	A	Hoxd3_MA0912.1	3	1	+	7.3844971794923016	7.270399428453278	CTGACTTCATGACCGT
chr9	132769851	132769852	chr9:132769852:T:C	rs73659474	T	C	t	Hoxd3_MA0912.1	18	0	-	0	0	.
chr9	132769854	132769855	chr9:132769855:C:T	rs1233864599	C	T	c	Hoxd3_MA0912.1	15	1	-	8.298958462464249	7.457959835505033	TTAAGTTAATTGCTGG
chr9	132777588	132777589	chr9:132777589:A:T	rs7861523	A	T	a	Hoxd3_MA0912.1	30	0	-	0	0	.
chr9	133142768	133142769	chr9:133142769:T:C	rs11244009	T	C	C	Hoxd3_MA0912.1	-5	0	-	0	0	.
chr9	133647613	133647614	chr9:133647614:C:T	rs3025410	C	T	C	Hoxd3_MA0912.1	-17	0	+	0	0	.
chr9	133715318	133715319	chr9:133715319:G:A	rs2427983	G	A	G	Hoxd3_MA0912.1	1	1	-	8.919224792108972	11.003285279645102	TCGTTTTAATTAGCCT
chr9	133942647	133942648	chr9:133942648:A:G	rs2519109	A	G	A	Hoxd3_MA0912.1	15	1	+	9.643899978965575	10.48489860592479	TAGAGTTAATTACACA
chr9	133950676	133950677	chr9:133950677:A:G	rs60641678	A	G	G	Hoxd3_MA0912.1	24	0	-	0	0	.
chr9	133950702	133950703	chr9:133950703:C:T	rs637521	C	T	C	Hoxd3_MA0912.1	-2	0	-	0	0	.
chr9	133987809	133987810	chr9:133987810:C:A	rs34288869	C	A	c	Hoxd3_MA0912.1	20	0	-	0	0	.
chr9	134205777	134205778	chr9:134205778:C:T	rs184907199	C	T	C	Hoxd3_MA0912.1	15	1	-	10.851400017331914	10.010401390372698	CTGGAGTAATTACCTG
chr9	134535490	134535491	chr9:134535491:T:C	rs3132316	T	C	C	Hoxd3_MA0912.1	2	1	+	8.36305292270022	7.896769074557017	CCTGATTAATTACACT
chr9	134628031	134628032	chr9:134628032:G:C	rs4641144	G	C	C	Hoxd3_MA0912.1	15	1	+	8.412923763757595	8.459228331799281	ATGGTCTCATTAACGG
chr9	134751762	134751763	chr9:134751763:A:C	rs73568479	A	C	A	Hoxd3_MA0912.1	-20	0	+	0	0	.
chr9	135261003	135261004	chr9:135261004:C:G	rs10125722	C	G	G	Hoxd3_MA0912.1	14	1	-	10.344557101142646	10.520972466427095	TTATTTTAATTAACGT
chr9	135330307	135330308	chr9:135330308:A:G	rs28522895	A	G	G	Hoxd3_MA0912.1	-11	0	+	0	0	.
chr9	135370786	135370787	chr9:135370787:A:G	rs7041650	A	G	A	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr9	135402311	135402312	chr9:135402312:C:T	rs12683591	C	T	C	Hoxd3_MA0912.1	24	0	+	0	0	.
chr9	135505722	135505723	chr9:135505723:T:C	rs56973993	T	C	T	Hoxd3_MA0912.1	15	1	+	9.70146678778109	8.923762219193081	CTGGGGTCATTAATTT
chr9	135604409	135604410	chr9:135604410:G:A	rs114177293	G	A	G	Hoxd3_MA0912.1	-9	0	+	0	0	.
chr9	135604427	135604428	chr9:135604428:T:C	rs4842010	T	C	C	Hoxd3_MA0912.1	9	1	+	6.64927860568133	-0.23929385388403268	CTGGGTCCATTGACCC
chr9	135773225	135773226	chr9:135773226:A:T	rs34257069	A	T	A	Hoxd3_MA0912.1	7	1	+	7.231512690297668	0.45182944766723937	CAGAGCTAATTGGAGC
chr9	136074587	136074588	chr9:136074588:C:G	rs4419885	C	G	C	Hoxd3_MA0912.1	-6	0	-	0	0	.
chr9	136100459	136100460	chr9:136100460:T:C	rs72773742	T	C	T	Hoxd3_MA0912.1	23	0	+	0	0	.
chr9	136781800	136781801	chr9:136781801:C:T	rs7023544	C	T	C	Hoxd3_MA0912.1	23	0	-	0	0	.
chr9	136781801	136781802	chr9:136781802:A:G	rs7029694	A	G	G	Hoxd3_MA0912.1	22	0	-	0	0	.
chr9	137300340	137300341	chr9:137300341:A:G	rs188249871	A	G	A	Hoxd3_MA0912.1	-12	0	-	0	0	.