chr1	633845	633846	chr1:633846:C:A	rs6594032	C	A	.	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	634468	634469	chr1:634469:G:A	rs9700408	G	A	.	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	1144403	1144404	chr1:1144404:G:A	rs114191160	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	1161910	1161911	chr1:1161911:C:A	rs61768478	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	1189282	1189283	chr1:1189283:G:A	rs6684820	G	A	N	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	1640474	1640475	chr1:1640475:C:G	rs72468213	C	G	c	Hoxd3.mouse_homeodomain_1	1	1	-	7.004985192593269	6.845053790848919	CGTAATTAGG
chr1	1647479	1647480	chr1:1647480:A:G	rs61774920	A	G	a	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	1647482	1647483	chr1:1647483:G:T	rs61774921	G	T	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	2284469	2284470	chr1:2284470:A:C	rs2643913	A	C	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	2651832	2651833	chr1:2651833:C:T	rs115187098	C	T	t	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	3153992	3153993	chr1:3153993:A:G	rs183609114	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.901879681539695	4.041783237978947	AGCAATTAGG
chr1	3169899	3169900	chr1:3169900:G:A	rs7518255	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	3169930	3169931	chr1:3169931:G:A	rs895624108	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	3169931	3169932	chr1:3169932:C:T	rs2651935	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	3236403	3236404	chr1:3236404:A:T	rs2455109	A	T	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	3268290	3268291	chr1:3268291:G:T	rs2455119	G	T	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	3477533	3477534	chr1:3477534:G:A	rs74050524	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr1	3477538	3477539	chr1:3477539:C:T	rs74050525	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.448367377574026	6.063467695812416	GGCAATTACG
chr1	3807425	3807426	chr1:3807426:G:A	rs12723501	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	3846797	3846798	chr1:3846798:A:G	rs540795368	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	4109269	4109270	chr1:4109270:G:C	rs566103058	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	4109280	4109281	chr1:4109281:G:A	rs6678453	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	4174022	4174023	chr1:4174023:C:T	rs567836913	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	4268891	4268892	chr1:4268892:G:A	rs16838501	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	4436598	4436599	chr1:4436599:C:T	rs1674877	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.0639691987030195	6.396248431999618	AGCAATTAGC
chr1	4920298	4920299	chr1:4920299:A:G	rs11585512	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	5099289	5099290	chr1:5099290:T:C	rs982156	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	5130105	5130106	chr1:5130106:A:G	rs12083573	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	5288151	5288152	chr1:5288152:C:T	rs115590420	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	5455958	5455959	chr1:5455959:T:A	chr1:5455959:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	5465630	5465631	chr1:5465631:G:A	rs72855699	G	A	g	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	5575255	5575256	chr1:5575256:A:C	rs7522344	A	C	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.300090444404122	7.433117506410662	GGTAATTAAT
chr1	5650281	5650282	chr1:5650282:G:A	rs79507074	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	5980561	5980562	chr1:5980562:G:A	rs61760764	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	5980593	5980594	chr1:5980594:C:G	rs74049339	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr1	6019569	6019570	chr1:6019570:G:C	rs7539366	G	C	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	6322722	6322723	chr1:6322723:G:T	rs72633419	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	6486924	6486925	chr1:6486925:A:G	rs12565527	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	6971164	6971165	chr1:6971165:T:A	rs6685497	T	A	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	7151279	7151280	chr1:7151280:T:G	rs9434482	T	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	7151288	7151289	chr1:7151289:C:T	rs114390851	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	7301009	7301010	chr1:7301010:C:T	rs111226282	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	7858287	7858288	chr1:7858288:G:T	rs1185717263	G	T	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	8132034	8132035	chr1:8132035:T:G	rs11121105	T	G	T	Hoxd3.mouse_homeodomain_1	9	1	+	6.700736798541729	6.8337638605482685	GGCAATTAGT
chr1	8579297	8579298	chr1:8579298:T:C	rs11121202	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	8582871	8582872	chr1:8582872:T:C	rs6663123	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	8639622	8639623	chr1:8639623:G:A	rs10779705	G	A	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	8826270	8826271	chr1:8826271:A:G	rs11799902	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	8875089	8875090	chr1:8875090:A:G	rs2038904	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	8914569	8914570	chr1:8914570:A:G	rs74050935	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	9266072	9266073	chr1:9266073:A:C	rs17033642	A	C	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	9266119	9266120	chr1:9266120:A:T	rs72641816	A	T	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	9792564	9792565	chr1:9792565:G:C	chr1:9792565:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	10034486	10034487	chr1:10034487:A:C	rs75644910	A	C	a	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	10034488	10034489	chr1:10034489:A:C	rs1053732905	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	10495604	10495605	chr1:10495605:C:T	rs147954701	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	10664100	10664101	chr1:10664101:G:A	rs145136221	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	10765303	10765304	chr1:10765304:G:A	rs77523604	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.279477285346397	5.984360706176533	GCTCATTAGC
chr1	10901565	10901566	chr1:10901566:C:T	rs74497631	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	11324732	11324733	chr1:11324733:C:T	rs145328982	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	11479834	11479835	chr1:11479835:T:C	rs6695628	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	11626710	11626711	chr1:11626711:T:G	rs10779761	T	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	11804992	11804993	chr1:11804993:G:T	rs77612924	G	T	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr1	12152083	12152084	chr1:12152084:G:A	rs114444558	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	12384765	12384766	chr1:12384766:A:G	rs114226847	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	12577370	12577371	chr1:12577371:A:C	rs61776828	A	C	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	12688740	12688741	chr1:12688741:G:T	rs10864575	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	13233731	13233732	chr1:13233732:G:T	rs28733911	G	T	-	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	13478739	13478740	chr1:13478740:A:C	rs79040918	A	C	A	Hoxd3.mouse_homeodomain_1	0	1	-	7.007267207914503	7.536291379402548	TGTAATTAGC
chr1	14443362	14443363	chr1:14443363:A:G	rs79182486	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	14683212	14683213	chr1:14683213:G:A	rs7532295	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	14725930	14725931	chr1:14725931:G:A	rs115192966	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	14811242	14811243	chr1:14811243:G:A	rs57044337	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	14911558	14911559	chr1:14911559:C:T	rs2690026	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	15025410	15025411	chr1:15025411:G:A	rs2871890	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	15028744	15028745	chr1:15028745:A:G	rs6665012	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.439408687090748	3.5793122435300004	GGTCATTAGC
chr1	15075056	15075057	chr1:15075057:A:T	rs61772203	A	T	T	Hoxd3.mouse_homeodomain_1	7	1	+	7.0639691987030195	4.543358835348842	AGCAATTAGC
chr1	15177576	15177577	chr1:15177577:G:T	rs4661590	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	15484850	15484851	chr1:15484851:C:T	rs6675825	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	15757909	15757910	chr1:15757910:T:A	rs151118617	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	16164203	16164204	chr1:16164204:G:A	rs11588669	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	16200033	16200034	chr1:16200034:G:A	rs221035	G	A	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	16605704	16605705	chr1:16605705:C:G	rs1254519192	C	G	.	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	16713111	16713112	chr1:16713112:C:A	rs1736699	C	A	.	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr1	17212637	17212638	chr1:17212638:C:T	rs79007379	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	17342067	17342068	chr1:17342068:G:A	rs35903413	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr1	17408275	17408276	chr1:17408276:G:A	rs139598727	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	17441419	17441420	chr1:17441420:C:A	rs72638908	C	A	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	17761497	17761498	chr1:17761498:C:T	rs6676457	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr1	18134468	18134469	chr1:18134469:T:C	rs79804203	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr1	18772784	18772785	chr1:18772785:G:A	rs72650381	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.466705306321288	7.007143308012243	CCCAATTAGC
chr1	18807765	18807766	chr1:18807766:A:G	rs7411058	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	18825063	18825064	chr1:18825064:T:C	rs76947837	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	19006279	19006280	chr1:19006280:T:C	rs16862452	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	19975433	19975434	chr1:19975434:A:T	rs876018	A	T	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	19975469	19975470	chr1:19975470:C:T	rs189084413	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	20356940	20356941	chr1:20356941:T:C	rs10916774	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	20604785	20604786	chr1:20604786:C:T	rs111333323	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	21022706	21022707	chr1:21022707:T:C	rs115878571	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	21183064	21183065	chr1:21183065:A:G	rs4654905	A	G	a	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	21586338	21586339	chr1:21586339:G:A	rs12023600	G	A	g	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	22205059	22205060	chr1:22205060:C:T	rs17356059	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	22483327	22483328	chr1:22483328:T:C	rs1769819	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	22500750	22500751	chr1:22500751:C:T	rs139824941	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	22856190	22856191	chr1:22856191:G:A	rs16827672	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	23179315	23179316	chr1:23179316:G:C	rs78621241	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.214270460494872	6.845053790848919	GCTAATTAGG
chr1	23179317	23179318	chr1:23179318:T:C	rs182298153	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.214270460494872	6.6738324588039175	GCTAATTAGG
chr1	23525294	23525295	chr1:23525295:G:A	rs3218148	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	23573961	23573962	chr1:23573962:G:A	rs2742953	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	23692287	23692288	chr1:23692288:C:A	rs150251180	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	24034338	24034339	chr1:24034339:G:A	rs34812119	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	24180370	24180371	chr1:24180371:T:C	rs3897440	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	24254925	24254926	chr1:24254926:T:C	rs4233034	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	24375505	24375506	chr1:24375506:G:A	rs182679177	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	24568049	24568050	chr1:24568050:A:C	rs1003574916	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	25168752	25168753	chr1:25168753:G:A	rs143379223	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	25513554	25513555	chr1:25513555:T:C	rs35941602	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	25769484	25769485	chr1:25769485:C:T	rs11585148	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	25996878	25996879	chr1:25996879:C:A	rs3008423	C	A	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	26072738	26072739	chr1:26072739:G:A	rs11247854	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	26277501	26277502	chr1:26277502:A:C	rs3820519	A	C	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	26473449	26473450	chr1:26473450:A:G	rs2255389	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	26788898	26788899	chr1:26788899:A:T	rs41303635	A	T	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	27527453	27527454	chr1:27527454:G:T	rs72884658	G	T	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr1	28079327	28079328	chr1:28079328:G:A	rs72875058	G	A	g	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	28079339	28079340	chr1:28079340:T:G	rs112374368	T	G	N	Hoxd3.mouse_homeodomain_1	3	1	-	7.44231768323065	6.34543499091885	AGTAATTAGG
chr1	28648868	28648869	chr1:28648869:C:T	rs186147276	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.214270460494872	7.273186104666311	GCTAATTAGG
chr1	28648884	28648885	chr1:28648885:T:C	chr1:28648885:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	28648887	28648888	chr1:28648888:A:G	rs144062355	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	28648888	28648889	chr1:28648889:G:T	rs9426296	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	28648890	28648891	chr1:28648891:C:T	rs533805301	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	29297800	29297801	chr1:29297801:C:T	rs9426314	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr1	29368589	29368590	chr1:29368590:C:T	rs6692485	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	29428965	29428966	chr1:29428966:A:T	rs7534522	A	T	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	29620720	29620721	chr1:29620721:G:A	rs9729003	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	29708422	29708423	chr1:29708423:G:A	rs11589959	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.066058952183682	6.906251450341592	CCTAATTAAC
chr1	29835131	29835132	chr1:29835132:C:T	rs1979088	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	29965349	29965350	chr1:29965350:G:A	rs4949240	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	29965370	29965371	chr1:29965371:G:A	rs72658984	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	29991784	29991785	chr1:29991785:C:G	rs10798974	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr1	30086283	30086284	chr1:30086284:A:G	chr1:30086284:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.989302180477614	4.156351229307912	GGTAATTAGA
chr1	30086297	30086298	chr1:30086298:C:A	rs547015620	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	30314321	30314322	chr1:30314322:G:T	rs411289	G	T	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	31063895	31063896	chr1:31063896:C:G	rs2039649	C	G	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	31063900	31063901	chr1:31063901:G:A	rs2039650	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	31483525	31483526	chr1:31483526:G:T	rs117463154	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.300090444404122	6.7710662729160775	GGTAATTAAT
chr1	31523659	31523660	chr1:31523660:C:G	rs41263957	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	31523687	31523688	chr1:31523688:A:G	rs72662915	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	31550898	31550899	chr1:31550899:C:T	rs6698094	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	31616785	31616786	chr1:31616786:T:G	rs72885456	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	31645211	31645212	chr1:31645212:A:G	rs7542583	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	31645215	31645216	chr1:31645216:G:A	rs147089307	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	31645236	31645237	chr1:31645237:T:G	rs16834631	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.516483198565452	5.419600506253651	AGCAATTACG
chr1	31931525	31931526	chr1:31931526:G:C	rs72665000	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	31961786	31961787	chr1:31961787:C:T	rs4949486	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	31976602	31976603	chr1:31976603:G:A	rs145421896	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.288435975829675	5.903536294068065	GCCAATTACG
chr1	32200887	32200888	chr1:32200888:G:T	rs114234120	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	33048498	33048499	chr1:33048499:C:T	rs78595863	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	33880960	33880961	chr1:33880961:T:C	rs6692851	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	34047946	34047947	chr1:34047947:C:T	rs12038191	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	34145023	34145024	chr1:34145024:C:T	rs116549688	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	34474365	34474366	chr1:34474366:T:C	rs798069	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr1	34648809	34648810	chr1:34648810:G:A	rs491000	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr1	34655396	34655397	chr1:34655397:G:A	rs10915009	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	35269681	35269682	chr1:35269682:C:T	rs116739611	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	35269687	35269688	chr1:35269688:C:T	rs183314819	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	35506130	35506131	chr1:35506131:C:T	rs1047477201	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	36390092	36390093	chr1:36390093:G:A	rs1339766	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	36450563	36450564	chr1:36450564:G:A	rs76502678	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	36711180	36711181	chr1:36711181:C:A	chr1:36711181:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	37465315	37465316	chr1:37465316:T:C	rs2783725	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	37466150	37466151	chr1:37466151:T:C	rs2245873	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	37746452	37746453	chr1:37746453:A:G	rs680064	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr1	37996430	37996431	chr1:37996431:G:C	chr1:37996431:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	38873583	38873584	chr1:38873584:G:A	rs2296456	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	39142703	39142704	chr1:39142704:T:A	rs533247	T	A	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	39186091	39186092	chr1:39186092:A:C	rs145981577	A	C	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	39269965	39269966	chr1:39269966:C:T	rs897263092	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	39415795	39415796	chr1:39415796:T:A	rs17343193	T	A	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	39527205	39527206	chr1:39527206:T:G	rs1180342	T	G	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	39618146	39618147	chr1:39618147:C:A	rs6600293	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.678572715728777	5.994501892414615	AGCAATTACC
chr1	39763695	39763696	chr1:39763696:A:G	rs2463260	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	39990762	39990763	chr1:39990763:G:A	rs3131694	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	40040199	40040200	chr1:40040200:C:T	rs3806202	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	40392446	40392447	chr1:40392447:C:A	rs185110523	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	40703447	40703448	chr1:40703448:T:C	rs2744798	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	40985763	40985764	chr1:40985764:T:C	rs4430318	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr1	41330791	41330792	chr1:41330792:C:T	rs4660512	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	41447010	41447011	chr1:41447011:A:G	rs116124041	A	G	.	Hoxd3.mouse_homeodomain_1	0	1	+	7.44231768323065	7.374201862239223	AGTAATTAGG
chr1	41919220	41919221	chr1:41919221:C:T	rs3795722	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	42344495	42344496	chr1:42344496:C:T	rs115419073	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	43472541	43472542	chr1:43472542:G:A	rs570039596	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	43476255	43476256	chr1:43476256:C:T	rs4660733	C	T	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	44537020	44537021	chr1:44537021:T:G	rs191053060	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	44606401	44606402	chr1:44606402:G:T	rs12129788	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	44803787	44803788	chr1:44803788:C:T	rs959458044	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr1	45340055	45340056	chr1:45340056:A:C	rs551403495	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	45762409	45762410	chr1:45762410:A:C	rs11211179	A	C	c	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr1	46333745	46333746	chr1:46333746:G:T	rs116306181	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	46538294	46538295	chr1:46538295:C:T	rs58174810	C	T	t	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	47190143	47190144	chr1:47190144:A:G	rs2248907	A	G	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr1	47195127	47195128	chr1:47195128:C:A	rs148406765	C	A	c	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	47195148	47195149	chr1:47195149:T:C	rs12089424	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr1	47533308	47533309	chr1:47533309:C:A	chr1:47533309:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	47935914	47935915	chr1:47935915:T:C	rs10789521	T	C	t	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	47972108	47972109	chr1:47972109:T:C	rs10888592	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	48025303	48025304	chr1:48025304:T:C	rs74075346	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	48051984	48051985	chr1:48051985:A:C	rs11582141	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	48499748	48499749	chr1:48499749:T:C	rs12021554	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	48744433	48744434	chr1:48744434:T:A	rs923030	T	A	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	50278961	50278962	chr1:50278962:G:A	rs113801687	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	51261520	51261521	chr1:51261521:C:T	rs2183422	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.063900836764708	6.904093334922617	CGTAATTAAG
chr1	51261540	51261541	chr1:51261541:T:C	rs2183423	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	51730463	51730464	chr1:51730464:C:G	rs7530179	C	G	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	51879289	51879290	chr1:51879290:T:C	rs12057356	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	51879294	51879295	chr1:51879295:T:A	rs17106855	T	A	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	52604437	52604438	chr1:52604438:C:T	rs776659003	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr1	53237901	53237902	chr1:53237902:A:G	rs114000572	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	53699867	53699868	chr1:53699868:C:T	rs1615037	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr1	53889534	53889535	chr1:53889535:G:A	rs11206236	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	54008798	54008799	chr1:54008799:T:C	rs6672989	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	54052393	54052394	chr1:54052394:T:C	rs183326961	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.8337638605482685	2.677204459211658	GGCAATTAGG
chr1	54062155	54062156	chr1:54062156:G:A	rs17109690	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	54096106	54096107	chr1:54096107:G:C	rs79883481	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	54303107	54303108	chr1:54303108:G:C	rs17392881	G	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	54451866	54451867	chr1:54451867:C:T	rs4328028	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	54633820	54633821	chr1:54633821:A:G	rs114744489	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	54681873	54681874	chr1:54681874:G:T	rs1560854	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	55367677	55367678	chr1:55367678:A:G	rs910270	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	55375682	55375683	chr1:55375683:C:T	rs142624075	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	55685103	55685104	chr1:55685104:T:C	rs2671227	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.304615789157963	-0.5359414352606966	CCCAATTAGG
chr1	55883694	55883695	chr1:55883695:G:A	rs74072547	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	7.05741800146904	GGTAATTAGA
chr1	56077201	56077202	chr1:56077202:T:G	rs1331856	T	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	56249160	56249161	chr1:56249161:C:T	rs113459309	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	56249188	56249189	chr1:56249189:G:A	rs7548377	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	56302878	56302879	chr1:56302879:C:T	rs12126612	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	56338705	56338706	chr1:56338706:C:T	rs72660493	C	T	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	56551922	56551923	chr1:56551923:G:A	rs76679390	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	56646548	56646549	chr1:56646549:T:G	rs1124900	T	G	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	56878223	56878224	chr1:56878224:C:T	rs2269115	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.433117506410662	7.048217824649052	GGTAATTAAG
chr1	57157026	57157027	chr1:57157027:A:C	rs10889026	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.995853377711593	3.1553542011595255	GGCAATTAGC
chr1	57489937	57489938	chr1:57489938:G:A	rs142908903	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	57595931	57595932	chr1:57595932:T:C	rs71642131	T	C	t	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	57861439	57861440	chr1:57861440:G:A	rs763789817	G	A	.	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	58019770	58019771	chr1:58019771:G:A	rs1188004	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	58415090	58415091	chr1:58415091:G:T	rs79206439	G	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr1	58651972	58651973	chr1:58651973:A:C	rs55677434	A	C	a	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	59321677	59321678	chr1:59321678:T:G	rs835409	T	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	59570935	59570936	chr1:59570936:G:A	rs17119631	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.962953441130107	6.667836861960243	ACCAATTAAC
chr1	59673315	59673316	chr1:59673316:G:A	rs72919653	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.995853377711593	7.0639691987030195	GGCAATTAGC
chr1	60017830	60017831	chr1:60017831:T:C	rs17120002	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.904037796958669	4.915179895045487	ACCAATTAGC
chr1	60017851	60017852	chr1:60017852:A:C	rs114613424	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	60042122	60042123	chr1:60042123:G:C	rs72924992	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.122884842874458	6.962953441130107	AGCAATTAAC
chr1	60488332	60488333	chr1:60488333:G:A	rs61802153	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.516483198565452	6.131583516803842	AGCAATTACG
chr1	60970288	60970289	chr1:60970289:G:C	rs558944870	G	C	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	61300129	61300130	chr1:61300130:C:T	rs2970457	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	61636634	61636635	chr1:61636635:A:G	rs12139976	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	62011131	62011132	chr1:62011132:G:A	rs66472440	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	62041329	62041330	chr1:62041330:T:C	rs75374808	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.8337638605482685	3.9736674169875204	GGCAATTAGG
chr1	62310624	62310625	chr1:62310625:G:A	rs34796779	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	62760151	62760152	chr1:62760152:C:T	rs11208023	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.241174800232684	6.573454033529282	GGTAATTAGT
chr1	62962650	62962651	chr1:62962651:A:C	rs11208077	A	C	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr1	63007175	63007176	chr1:63007176:T:C	rs7534421	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	63007196	63007197	chr1:63007197:G:A	rs7522596	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	63859879	63859880	chr1:63859880:T:C	rs636119	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	7.066058952183682	4.205962508622934	CCTAATTAAC
chr1	64077864	64077865	chr1:64077865:A:G	rs1260763	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	64122311	64122312	chr1:64122312:C:G	rs4110906	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	64172530	64172531	chr1:64172531:C:T	rs141696069	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	64323099	64323100	chr1:64323100:G:A	rs1496018	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	64662387	64662388	chr1:64662388:T:C	rs7517300	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	65371598	65371599	chr1:65371599:A:G	rs6588137	A	G	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	66578301	66578302	chr1:66578302:G:T	rs1838652	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	66855132	66855133	chr1:66855133:A:G	rs1104705	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.374201862239223	4.541250911069522	GGTAATTAGG
chr1	66884828	66884829	chr1:66884829:C:T	rs112231610	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	67555889	67555890	chr1:67555890:G:C	rs6588277	G	C	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	67687454	67687455	chr1:67687455:A:G	rs3783474	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	67705848	67705849	chr1:67705849:C:T	rs41306635	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	67939427	67939428	chr1:67939428:G:T	rs6688063	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	67998085	67998086	chr1:67998086:A:G	rs12119239	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	68168957	68168958	chr1:68168958:C:T	rs1367446	C	T	c	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	68168958	68168959	chr1:68168959:G:A	rs12132335	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	68433702	68433703	chr1:68433703:A:G	rs3125891	A	G	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	69245952	69245953	chr1:69245953:C:T	rs2246327	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	6.892679504719707	6.507779822958097	GGCAATTAAG
chr1	69994445	69994446	chr1:69994446:T:G	rs12024870	T	G	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	70429269	70429270	chr1:70429270:C:A	rs75925846	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	70488250	70488251	chr1:70488251:C:T	rs12094445	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	70934190	70934191	chr1:70934191:A:G	rs2421735	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	71894632	71894633	chr1:71894633:G:T	rs12217078	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	72064182	72064183	chr1:72064183:T:C	rs12131816	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	73516400	73516401	chr1:73516401:G:T	rs4384177	G	T	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	73516435	73516436	chr1:73516436:T:G	rs77857773	T	G	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	74284081	74284082	chr1:74284082:T:A	rs1412823	T	A	-	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	74946577	74946578	chr1:74946578:T:A	rs67879852	T	A	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	75165942	75165943	chr1:75165943:A:T	rs17096318	A	T	-	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	76827263	76827264	chr1:76827264:A:G	rs11162219	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr1	77274136	77274137	chr1:77274137:G:C	rs12126117	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr1	77376222	77376223	chr1:77376223:A:T	rs60053175	A	T	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	77392345	77392346	chr1:77392346:T:C	rs76694825	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr1	77539043	77539044	chr1:77539044:A:G	rs181231170	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	77978863	77978864	chr1:77978864:C:T	rs112889586	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	78143626	78143627	chr1:78143627:T:C	rs672391	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	78280852	78280853	chr1:78280853:C:G	rs1328444	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.663322844565413	7.503391442821062	AGTAATTAAC
chr1	78465845	78465846	chr1:78465846:C:T	rs12073895	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	78560986	78560987	chr1:78560987:C:A	rs11162507	C	A	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	79051448	79051449	chr1:79051449:G:A	chr1:79051449:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	80534153	80534154	chr1:80534154:T:C	rs12124232	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	80706795	80706796	chr1:80706796:C:T	rs74099524	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	80762972	80762973	chr1:80762973:T:C	rs78670355	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr1	81158808	81158809	chr1:81158809:G:A	rs17416550	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	81678853	81678854	chr1:81678854:G:A	rs72939288	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	81926071	81926072	chr1:81926072:A:G	rs1342128	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	82797452	82797453	chr1:82797453:G:A	rs115922495	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.241174800232684	7.30929062122411	GGTAATTAGT
chr1	82845360	82845361	chr1:82845361:C:A	rs1249222712	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	83112228	83112229	chr1:83112229:C:T	rs12146035	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	83770299	83770300	chr1:83770300:T:C	rs11163829	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	83830372	83830373	chr1:83830373:T:C	rs910180	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	83830376	83830377	chr1:83830377:A:C	rs910181	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	84387458	84387459	chr1:84387459:G:T	rs12044734	G	T	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	84698137	84698138	chr1:84698138:C:G	rs143682830	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.439408687090748	6.070192017444794	GGTCATTAGC
chr1	84889288	84889289	chr1:84889289:G:A	rs12032140	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	84954360	84954361	chr1:84954361:A:C	rs504504	A	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	85003444	85003445	chr1:85003445:A:G	rs6576740	A	G	a	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	85244231	85244232	chr1:85244232:C:T	rs7531640	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	86195519	86195520	chr1:86195520:T:C	rs1032960	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	86695578	86695579	chr1:86695579:C:T	rs60228133	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	86778895	86778896	chr1:86778896:C:A	rs1341306116	C	A	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr1	87129292	87129293	chr1:87129293:T:A	rs114492063	T	A	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	87240261	87240262	chr1:87240262:C:T	rs4623672	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	87358293	87358294	chr1:87358294:G:A	rs72728020	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	87435533	87435534	chr1:87435534:G:T	rs12134089	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr1	87717034	87717035	chr1:87717035:A:G	rs10493801	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	87735936	87735937	chr1:87735937:A:G	rs305451	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	87772014	87772015	chr1:87772015:C:A	rs35913405	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	88333878	88333879	chr1:88333879:G:A	rs79204151	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	88513505	88513506	chr1:88513506:C:T	rs306312	C	T	t	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	89594402	89594403	chr1:89594403:A:G	rs41288391	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	89611756	89611757	chr1:89611757:G:A	rs4147505	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	89762481	89762482	chr1:89762482:C:T	rs1458457367	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	89762483	89762484	chr1:89762484:A:C	rs1275526467	A	C	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	89883787	89883788	chr1:89883788:C:T	rs17498135	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	90075035	90075036	chr1:90075036:A:T	rs2703998	A	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	90135258	90135259	chr1:90135259:T:C	rs7520257	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	90358118	90358119	chr1:90358119:G:A	rs10922845	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	7.0639691987030195	6.396248431999618	AGCAATTAGC
chr1	90832089	90832090	chr1:90832090:G:A	rs61737574	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	91113667	91113668	chr1:91113668:C:A	rs2128855	C	A	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.894837620138681	6.365813448650636	GCCAATTAAC
chr1	91502082	91502083	chr1:91502083:T:G	rs75316566	T	G	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	91575944	91575945	chr1:91575945:A:G	rs4658231	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.122884842874458	4.262788399313711	AGCAATTAAC
chr1	91673041	91673042	chr1:91673042:G:A	rs141395440	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	91743108	91743109	chr1:91743109:T:C	rs4658112	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr1	92782670	92782671	chr1:92782671:T:C	rs6685705	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	93080257	93080258	chr1:93080258:A:C	chr1:93080258:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	93570819	93570820	chr1:93570820:T:A	rs12094668	T	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	93630986	93630987	chr1:93630987:C:T	rs145285510	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.518641313984426	5.994501892414615	ACCAATTACC
chr1	93852046	93852047	chr1:93852047:A:T	rs11165021	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	94040634	94040635	chr1:94040635:G:T	rs6703052	G	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	94077213	94077214	chr1:94077214:G:T	rs3120133	G	T	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	94624063	94624064	chr1:94624064:G:C	rs3814015	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	94821813	94821814	chr1:94821814:T:G	rs60716620	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.2190107174197315	3.3119156593187977	AGTAATTACC
chr1	95096149	95096150	chr1:95096150:T:C	rs11591183	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	95096162	95096163	chr1:95096163:C:T	rs116043384	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	95614323	95614324	chr1:95614324:G:A	rs12727688	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr1	95987352	95987353	chr1:95987353:A:T	rs10874975	A	T	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	96349949	96349950	chr1:96349950:C:A	rs13374632	C	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	96349951	96349952	chr1:96349952:C:T	rs13374633	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	+	6.9039694350203575	6.379830013450546	CCTAATTAAG
chr1	97048846	97048847	chr1:97048847:C:A	rs72724352	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.892679504719707	6.208608681405544	GGCAATTAAG
chr1	97661352	97661353	chr1:97661353:C:G	chr1:97661353:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	99441475	99441476	chr1:99441476:T:C	rs7542971	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	99471304	99471305	chr1:99471305:A:T	rs10493916	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.220683642931706	4.131186311101128	GGTAATGAGC
chr1	99566017	99566018	chr1:99566018:T:C	rs17120680	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	99647790	99647791	chr1:99647791:T:C	rs760489544	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	100465516	100465517	chr1:100465517:A:C	rs3754131	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	100645648	100645649	chr1:100645649:C:A	rs1981134	C	A	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	100757250	100757251	chr1:100757251:A:G	rs1028819	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	100847985	100847986	chr1:100847986:T:A	rs71662905	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	101205091	101205092	chr1:101205092:T:C	rs138341377	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	101238250	101238251	chr1:101238251:G:A	rs949239777	G	A	g	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	101288637	101288638	chr1:101288638:A:G	rs6670321	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	101323774	101323775	chr1:101323775:G:A	rs151126694	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.066058952183682	6.906251450341592	CCTAATTAAC
chr1	101375605	101375606	chr1:101375606:C:T	rs150007385	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	101623327	101623328	chr1:101623328:A:G	rs10782844	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.501233327402089	3.3446739260654783	AGTAATTAAG
chr1	101739239	101739240	chr1:101739240:G:A	chr1:101739240:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	101929541	101929542	chr1:101929542:A:G	rs7513512	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr1	102353208	102353209	chr1:102353209:A:G	rs1417235	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	102944567	102944568	chr1:102944568:G:A	rs12084902	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	103847651	103847652	chr1:103847652:A:G	rs4491067	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	104120619	104120620	chr1:104120620:C:T	rs72689172	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	104559760	104559761	chr1:104559761:A:G	rs61815335	A	G	a	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	105633149	105633150	chr1:105633150:A:T	rs530679898	A	T	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	107141126	107141127	chr1:107141127:G:A	chr1:107141127:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	107247256	107247257	chr1:107247257:T:C	rs76866557	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.273186104666311	3.116626703329701	GCTAATTAAG
chr1	107396078	107396079	chr1:107396079:T:C	rs10881466	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	108049631	108049632	chr1:108049632:A:G	rs79306747	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	108476756	108476757	chr1:108476757:G:A	rs58859218	G	A	N	Hoxd3.mouse_homeodomain_1	1	1	+	6.241240225091396	5.573519458387995	CGCAATTACC
chr1	108583881	108583882	chr1:108583882:T:C	rs2804259	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	108748179	108748180	chr1:108748180:A:T	rs6701529	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	109103611	109103612	chr1:109103612:G:A	rs1345672223	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	109103637	109103638	chr1:109103638:C:T	rs536934	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	109117444	109117445	chr1:109117445:G:A	rs35502610	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	-	6.835921975967242	6.31178255439743	GCCAATTAGC
chr1	109240638	109240639	chr1:109240639:T:C	rs11102964	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr1	109632780	109632781	chr1:109632781:G:C	rs529151553	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.0639691987030195	6.904037796958669	AGCAATTAGC
chr1	109637607	109637608	chr1:109637608:A:G	rs58126698	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr1	109726205	109726206	chr1:109726206:A:C	rs4970774	A	C	C	Hoxd3.mouse_homeodomain_1	2	1	-	7.435275621829636	3.528180563728702	GCTAATTAAC
chr1	109791411	109791412	chr1:109791412:A:G	rs11102006	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.741948279795344	3.908997328625642	ACCAATTAGG
chr1	110131077	110131078	chr1:110131078:G:A	rs12408727	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	110225438	110225439	chr1:110225439:G:A	rs2761440	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.464547190902314	6.304739689060224	CGCAATTAGG
chr1	110390916	110390917	chr1:110390917:A:C	rs1013543965	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	110455193	110455194	chr1:110455194:A:G	rs61784664	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	110475690	110475691	chr1:110475691:T:C	rs17025855	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	110638342	110638343	chr1:110638343:G:T	rs61803546	G	T	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	111468998	111468999	chr1:111468999:T:C	rs116526150	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	111530134	111530135	chr1:111530135:G:A	rs114139183	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	111774889	111774890	chr1:111774890:C:A	rs197422	C	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.277319169927424	5.542149137253252	GGTCATTAGG
chr1	111820022	111820023	chr1:111820023:G:A	rs2365669	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.523462835073753	6.363655333231662	CGCAATTAAG
chr1	111820139	111820140	chr1:111820140:G:T	rs639570	G	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	111947209	111947210	chr1:111947210:C:T	rs9429614	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	112005495	112005496	chr1:112005496:G:A	rs3000754	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.700736798541729	6.0330160318383275	GGCAATTAGT
chr1	112030859	112030860	chr1:112030860:A:G	rs72694661	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.503391442821062	7.435275621829636	ACTAATTAAC
chr1	112030874	112030875	chr1:112030875:C:T	rs574204200	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	112144361	112144362	chr1:112144362:C:G	rs1442840	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	112762759	112762760	chr1:112762760:C:G	rs79928849	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	112927619	112927620	chr1:112927620:T:C	rs76760679	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	113167014	113167015	chr1:113167015:A:G	rs4839297	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.279477285346397	-0.5610799390722622	GCTCATTAGC
chr1	113256100	113256101	chr1:113256101:G:A	rs773612	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	114082440	114082441	chr1:114082441:A:C	chr1:114082441:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.300090444404122	3.3929953863031885	GGTAATTAAT
chr1	114089357	114089358	chr1:114089358:C:T	rs2432	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	115727612	115727613	chr1:115727613:T:G	rs35672929	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.901879681539695	5.804996989227894	AGCAATTAGG
chr1	115783487	115783488	chr1:115783488:C:T	rs10494182	C	T	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	116494294	116494295	chr1:116494295:G:T	rs757564181	G	T	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	116991174	116991175	chr1:116991175:A:G	rs75829447	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.439408687090748	3.5793122435300004	GGTCATTAGC
chr1	116991180	116991181	chr1:116991181:A:G	rs1292502985	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	117026891	117026892	chr1:117026892:G:A	rs3820495	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	117069675	117069676	chr1:117069676:A:C	rs10754334	A	C	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	117069707	117069708	chr1:117069708:G:A	rs2057593	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	117147290	117147291	chr1:117147291:G:C	rs114955903	G	C	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	117147299	117147300	chr1:117147300:C:G	rs1892408	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.2190107174197315	7.059079315675381	AGTAATTACC
chr1	117216149	117216150	chr1:117216150:G:A	rs6662387	G	A	g	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	117270864	117270865	chr1:117270865:G:T	rs12079298	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr1	117601709	117601710	chr1:117601710:A:G	rs1966228	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	117630011	117630012	chr1:117630012:G:T	rs140962067	G	T	G	Hoxd3.mouse_homeodomain_1	8	1	+	5.898970685399792	5.16380065272562	GGCCATTAGC
chr1	118122532	118122533	chr1:118122533:G:A	rs75225209	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.150894896428305	6.483174129724904	GGTAATTACC
chr1	118253425	118253426	chr1:118253426:T:C	rs146166847	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	118958149	118958150	chr1:118958150:G:A	rs985036	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	119027492	119027493	chr1:119027493:A:G	rs2298081	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	119165120	119165121	chr1:119165121:G:A	rs56234947	G	A	N	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	119280186	119280187	chr1:119280187:G:A	chr1:119280187:G:A	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.376359977658197	7.4444757986496235	GCTAATTAGC
chr1	119280201	119280202	chr1:119280202:A:C	chr1:119280202:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	120180214	120180215	chr1:120180215:G:T	rs1313908342	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	120182519	120182520	chr1:120182520:G:T	rs1320926711	G	T	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	122533606	122533607	chr1:122533607:T:G	rs1164881439	T	G	.	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	147642007	147642008	chr1:147642008:T:C	rs145567162	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	147642045	147642046	chr1:147642046:T:C	rs781836371	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	147748702	147748703	chr1:147748703:G:A	rs77636361	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	148334749	148334750	chr1:148334750:C:G	rs2999607	C	G	.	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	148334750	148334751	chr1:148334751:C:G	rs587751853	C	G	.	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	148334755	148334756	chr1:148334756:C:T	rs537191	C	T	.	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	148334769	148334770	chr1:148334770:G:A	rs1385034731	G	A	.	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	148334772	148334773	chr1:148334773:C:T	rs80113239	C	T	.	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	148334773	148334774	chr1:148334774:A:C	rs782266858	A	C	.	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	150067209	150067210	chr1:150067210:C:T	rs9887866	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	150067212	150067213	chr1:150067213:T:C	chr1:150067213:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	150067232	150067233	chr1:150067233:G:C	rs782459418	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.741948279795344	6.356551796821101	ACCAATTAGG
chr1	150067239	150067240	chr1:150067240:T:C	rs74127403	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	150104954	150104955	chr1:150104955:T:C	rs10749674	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	151049032	151049033	chr1:151049033:A:G	rs6664387	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	151221420	151221421	chr1:151221421:A:G	rs1892196	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.122884842874458	4.262788399313711	AGCAATTAAC
chr1	151790825	151790826	chr1:151790826:T:C	rs114057855	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	152002350	152002351	chr1:152002351:G:A	rs34901307	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.241174800232684	6.573454033529282	GGTAATTAGT
chr1	152043948	152043949	chr1:152043949:A:G	rs3007680	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	153034052	153034053	chr1:153034053:T:A	rs946096	T	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	154655375	154655376	chr1:154655376:G:A	rs9427115	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	154780724	154780725	chr1:154780725:A:C	rs10752608	A	C	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	154780729	154780730	chr1:154780730:A:G	rs12130204	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	154932702	154932703	chr1:154932703:A:G	rs7543051	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	156369790	156369791	chr1:156369791:T:C	rs74609238	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	157004468	157004469	chr1:157004469:A:T	rs1161028904	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.44231768323065	4.9217073198764725	AGTAATTAGG
chr1	157107784	157107785	chr1:157107785:G:T	rs6689840	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	157147834	157147835	chr1:157147835:A:T	rs6679296	A	T	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	157202891	157202892	chr1:157202892:G:A	rs113735429	G	A	N	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	157652044	157652045	chr1:157652045:C:T	rs2778009	C	T	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	158007962	158007963	chr1:158007963:C:A	rs1888821	C	A	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	158134519	158134520	chr1:158134520:C:T	rs55737420	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	158819206	158819207	chr1:158819207:G:T	rs857791	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.466705306321288	5.919716107396353	CCCAATTAGC
chr1	158884732	158884733	chr1:158884733:T:G	rs2820146	T	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	158951773	158951774	chr1:158951774:G:C	rs72704932	G	C	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr1	159012767	159012768	chr1:159012768:T:C	rs1041500005	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	159142032	159142033	chr1:159142033:C:A	rs3026926	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	159823674	159823675	chr1:159823675:T:G	rs370337222	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.300090444404122	3.3929953863031885	GGTAATTAAT
chr1	159867131	159867132	chr1:159867132:G:A	rs4233359	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	159867180	159867181	chr1:159867181:C:T	rs2494512	C	T	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	160167547	160167548	chr1:160167548:G:A	rs12063738	G	A	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	160395219	160395220	chr1:160395220:C:T	rs34830574	C	T	t	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	160450245	160450246	chr1:160450246:C:T	rs11585691	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	160568103	160568104	chr1:160568104:G:T	rs879504920	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	160631461	160631462	chr1:160631462:T:A	rs7522135	T	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	161477763	161477764	chr1:161477764:T:C	rs74849230	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	161533058	161533059	chr1:161533059:A:G	rs79568124	A	G	-	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	161594881	161594882	chr1:161594882:T:C	rs80123037	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	161704796	161704797	chr1:161704797:T:C	rs66930627	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	3.881851836234596	ACCAATTAGG
chr1	161745585	161745586	chr1:161745586:T:C	rs6427624	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	162036224	162036225	chr1:162036225:T:G	rs16842397	T	G	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	162270519	162270520	chr1:162270520:T:C	rs17459671	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	162890631	162890632	chr1:162890632:A:G	rs10917629	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	163063354	163063355	chr1:163063355:C:T	rs186452777	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	163857080	163857081	chr1:163857081:C:T	rs1441189	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr1	164563075	164563076	chr1:164563076:C:T	rs116798897	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	164623288	164623289	chr1:164623289:G:A	rs112752573	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	164750823	164750824	chr1:164750824:A:G	rs10918063	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	164971370	164971371	chr1:164971371:A:C	rs10800062	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.279477285346397	3.830321815071544	GCTCATTAGC
chr1	165365644	165365645	chr1:165365645:G:A	rs12076311	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	165375279	165375280	chr1:165375280:G:A	rs11588066	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	166165219	166165220	chr1:166165220:G:C	rs79656476	G	C	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	166829291	166829292	chr1:166829292:T:G	rs12040139	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	167485949	167485950	chr1:167485950:A:C	rs34000101	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	167530545	167530546	chr1:167530546:C:T	rs36019038	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr1	168626566	168626567	chr1:168626567:A:T	rs145211196	A	T	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	168792936	168792937	chr1:168792937:C:T	rs2066895	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	168958472	168958473	chr1:168958473:C:T	rs1288225874	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr1	169062294	169062295	chr1:169062295:A:G	rs576376202	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	169124437	169124438	chr1:169124438:C:T	rs7540067	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr1	169201444	169201445	chr1:169201445:T:G	rs4656660	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	169289067	169289068	chr1:169289068:C:T	rs12121994	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	170591462	170591463	chr1:170591463:A:G	rs6658866	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	170591662	170591663	chr1:170591663:C:T	rs182878443	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	7.501233327402089	AGCAATTAAG
chr1	171116746	171116747	chr1:171116747:A:G	rs999033642	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.4444757986496235	5.455617896736442	ACTAATTAGC
chr1	171160795	171160796	chr1:171160796:C:A	rs146579349	C	A	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	171188868	171188869	chr1:171188869:T:A	rs28369818	T	A	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	171245569	171245570	chr1:171245570:T:C	chr1:171245570:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	171344851	171344852	chr1:171344852:T:A	rs2235509	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	171434227	171434228	chr1:171434228:C:T	rs10912992	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	172211255	172211256	chr1:172211256:G:A	rs610587	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr1	172827120	172827121	chr1:172827121:G:A	rs6662628	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	173267508	173267509	chr1:173267509:T:C	rs2022034	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	173406857	173406858	chr1:173406858:C:T	rs6671832	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	6.9888053792649805	6.6390318295650514	GGTAATTACG
chr1	173661545	173661546	chr1:173661546:T:G	rs184875552	T	G	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	173853082	173853083	chr1:173853083:A:G	rs2281486	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	173863667	173863668	chr1:173863668:A:G	rs1322771	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.904037796958669	4.915179895045487	ACCAATTAGC
chr1	174398115	174398116	chr1:174398116:T:C	rs78176042	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.220683642931706	2.064124241595096	GGTAATGAGC
chr1	174603444	174603445	chr1:174603445:C:T	rs72715255	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	175317259	175317260	chr1:175317260:C:T	rs10798380	C	T	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	176142622	176142623	chr1:176142623:T:A	rs10913143	T	A	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	176152708	176152709	chr1:176152709:G:A	rs147043622	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.619588709619026	5.951867942915626	CGTAATTACG
chr1	176184305	176184306	chr1:176184306:A:G	rs791743	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	176902500	176902501	chr1:176902501:G:T	rs6664879	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	177886381	177886382	chr1:177886382:C:A	rs516636	C	A	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	178005217	178005218	chr1:178005218:T:C	rs114411945	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	178921649	178921650	chr1:178921650:A:G	rs7366	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr1	178937969	178937970	chr1:178937970:C:T	rs945218	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	179083915	179083916	chr1:179083916:C:G	rs4652355	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	179103830	179103831	chr1:179103831:C:T	rs4651013	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	179877399	179877400	chr1:179877400:A:C	rs150972433	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.30929062122411	3.4687914446720427	AGTAATTAGT
chr1	180135792	180135793	chr1:180135793:T:C	rs3845389	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	180140223	180140224	chr1:180140224:A:T	rs7547954	A	T	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	180170651	180170652	chr1:180170652:G:A	rs4651059	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr1	180180328	180180329	chr1:180180329:G:C	rs12080055	G	C	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	180226693	180226694	chr1:180226694:G:A	rs142559878	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	180244816	180244817	chr1:180244817:C:T	rs56209326	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.054769021883032	7.122884842874458	GGCAATTAAC
chr1	180926049	180926050	chr1:180926050:C:T	rs79414434	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	181392813	181392814	chr1:181392814:G:C	rs114798990	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	181396695	181396696	chr1:181396696:C:T	rs76733547	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	182174798	182174799	chr1:182174799:T:G	rs1779799	T	G	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	182368566	182368567	chr1:182368567:T:C	rs1325746	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	182407093	182407094	chr1:182407094:C:A	rs12748778	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	183021512	183021513	chr1:183021513:C:T	rs10911193	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	183329366	183329367	chr1:183329367:T:C	rs10797875	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	183674934	183674935	chr1:183674935:C:A	rs4325101	C	A	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	183780370	183780371	chr1:183780371:G:A	rs2148623	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	184334595	184334596	chr1:184334596:A:G	rs12127203	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.122884842874458	5.134026940961276	AGCAATTAAC
chr1	184664582	184664583	chr1:184664583:G:C	rs4233120	G	C	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	185552364	185552365	chr1:185552365:C:A	rs7515674	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr1	185646477	185646478	chr1:185646478:T:G	chr1:185646478:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	186245379	186245380	chr1:186245380:G:T	rs661045	G	T	g	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	186713742	186713743	chr1:186713743:T:C	rs12401885	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.960795325711134	4.971937423797952	AGCAATTAAG
chr1	187498936	187498937	chr1:187498937:A:C	rs10753012	A	C	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	187786651	187786652	chr1:187786652:T:A	rs2430102	T	A	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	188187464	188187465	chr1:188187465:G:C	rs4082456	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.901879681539695	6.516483198565452	AGCAATTAGG
chr1	188271178	188271179	chr1:188271179:G:C	rs11589015	G	C	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	188271211	188271212	chr1:188271212:C:G	rs10912298	C	G	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	188325280	188325281	chr1:188325281:A:T	rs28392477	A	T	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	189312588	189312589	chr1:189312589:G:T	rs951601	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	189657316	189657317	chr1:189657317:A:T	rs541175	A	T	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	189657322	189657323	chr1:189657323:A:G	rs516851	A	G	a	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	189658704	189658705	chr1:189658705:G:A	rs1259805978	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	189658729	189658730	chr1:189658730:A:G	rs482865	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	189821526	189821527	chr1:189821527:G:A	rs9427457	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr1	190162619	190162620	chr1:190162620:C:T	rs10920654	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	190170416	190170417	chr1:190170417:G:A	rs815331	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	191425741	191425742	chr1:191425742:C:T	rs638567	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.700736798541729	6.7596524427131675	GGCAATTAGT
chr1	191687882	191687883	chr1:191687883:C:T	rs2785781	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	192439417	192439418	chr1:192439418:C:T	rs10921150	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	192916350	192916351	chr1:192916351:A:G	rs7514366	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	193629888	193629889	chr1:193629889:T:C	rs71642926	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	193880525	193880526	chr1:193880526:T:C	rs517206	T	C	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.678572715728777	6.61045689473735	AGCAATTACC
chr1	194144815	194144816	chr1:194144816:A:C	rs561948720	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.9039694350203575	5.807086742708557	CCTAATTAAG
chr1	195138720	195138721	chr1:195138721:A:G	rs12407979	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.450525492992999	2.2939660916563893	GCCAATTACC
chr1	195781988	195781989	chr1:195781989:A:T	rs3010140	A	T	T	Hoxd3.mouse_homeodomain_1	6	1	-	7.433117506410662	4.612531112625388	GGTAATTAAG
chr1	196194047	196194048	chr1:196194048:T:A	rs10754181	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.433117506410662	5.305363613695256	GGTAATTAAG
chr1	196488244	196488245	chr1:196488245:C:A	rs72732257	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.273186104666311	7.140159042659771	GCTAATTAAG
chr1	197277837	197277838	chr1:197277838:C:A	rs3790380	C	A	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	197787302	197787303	chr1:197787303:C:T	rs1747821	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	197811427	197811428	chr1:197811428:G:A	rs10922292	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.678572715728777	6.328799166028848	AGCAATTACC
chr1	197896807	197896808	chr1:197896808:G:A	rs777856591	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	197915497	197915498	chr1:197915498:T:C	rs115253532	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	198065399	198065400	chr1:198065400:G:A	rs72747193	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	198126669	198126670	chr1:198126670:T:C	rs12141632	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.241174800232684	4.408223849062982	GGTAATTAGT
chr1	200208066	200208067	chr1:200208067:A:G	rs2363575	A	G	T	Hoxd3.mouse_homeodomain_1	7	1	+	6.277319169927424	2.1207597685908133	GGTCATTAGG
chr1	200330908	200330909	chr1:200330909:C:A	rs10919897	C	A	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	200364796	200364797	chr1:200364797:G:A	rs2050770	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	201171081	201171082	chr1:201171082:G:A	rs1104223	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	201568584	201568585	chr1:201568585:G:A	rs41515251	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	201575702	201575703	chr1:201575703:A:G	rs11589790	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	201679274	201679275	chr1:201679275:C:T	rs755153581	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	202289988	202289989	chr1:202289989:A:G	rs187970821	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	202651240	202651241	chr1:202651241:T:C	rs12047572	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	203143354	203143355	chr1:203143355:C:T	rs10158980	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	203158995	203158996	chr1:203158996:A:G	rs11809836	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	203369359	203369360	chr1:203369360:G:A	rs74484763	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.540805396797378	6.608921217788804	GCCAATTAGT
chr1	203427069	203427070	chr1:203427070:C:T	rs71643014	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	203666079	203666080	chr1:203666080:G:A	rs6675071	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	203671255	203671256	chr1:203671256:G:A	rs1394097206	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr1	203860412	203860413	chr1:203860413:G:A	rs4951274	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	203860427	203860428	chr1:203860428:G:A	rs4951031	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	6.732748102975356	6.3478484212137465	GCCAATTAAG
chr1	204237166	204237167	chr1:204237167:G:A	rs4284302	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	204398539	204398540	chr1:204398540:G:C	rs3014622	G	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	204446647	204446648	chr1:204446648:C:T	rs144789599	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	204849934	204849935	chr1:204849935:A:G	rs1107714	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	205326867	205326868	chr1:205326868:G:A	rs147203433	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	205326870	205326871	chr1:205326871:A:G	rs11240422	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	205356329	205356330	chr1:205356330:G:A	rs2298251	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	205599629	205599630	chr1:205599630:C:T	rs2282453	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	205647613	205647614	chr1:205647614:T:C	rs1109893	T	C	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	206115532	206115533	chr1:206115533:T:A	rs34352730	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr1	206679754	206679755	chr1:206679755:C:A	rs12043881	C	A	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr1	206679773	206679774	chr1:206679774:C:G	rs115835379	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.44231768323065	7.282386281486299	AGTAATTAGG
chr1	206896180	206896181	chr1:206896181:T:C	rs291111	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	207313328	207313329	chr1:207313329:T:C	rs59629371	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	207991266	207991267	chr1:207991267:G:A	rs78811499	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	207991274	207991275	chr1:207991275:A:C	rs545947	A	C	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	208058585	208058586	chr1:208058586:C:T	rs140829393	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr1	208078873	208078874	chr1:208078874:G:A	rs554798685	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.6266367080656385	6.466829206223548	CGCAATTAGC
chr1	208272426	208272427	chr1:208272427:A:G	rs79421322	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.960795325711134	4.971937423797952	AGCAATTAAG
chr1	208450527	208450528	chr1:208450528:C:T	rs12027131	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	208475647	208475648	chr1:208475648:A:G	chr1:208475648:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.604407200393974	7.536291379402548	AGTAATTAGC
chr1	208475656	208475657	chr1:208475657:C:T	rs79445772	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.604407200393974	7.30929062122411	AGTAATTAGC
chr1	208475661	208475662	chr1:208475662:C:T	rs138157045	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	208475666	208475667	chr1:208475667:C:T	rs187510779	C	T	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	208936409	208936410	chr1:208936410:C:T	rs115172208	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.525620950492726	6.001481528922915	CCCAATTAAC
chr1	209149742	209149743	chr1:209149743:A:G	rs4844767	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	210295336	210295337	chr1:210295337:T:G	chr1:210295337:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr1	210373966	210373967	chr1:210373967:G:A	rs147600875	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	210536046	210536047	chr1:210536047:T:C	rs12126287	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	211479412	211479413	chr1:211479413:T:A	rs11119749	T	A	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	211479450	211479451	chr1:211479451:C:T	rs17017534	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	211704302	211704303	chr1:211704303:G:A	rs11590558	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr1	211886108	211886109	chr1:211886109:A:T	rs372249583	A	T	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	212303308	212303309	chr1:212303309:G:A	rs34447409	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	212434061	212434062	chr1:212434062:C:T	rs3767868	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	212470863	212470864	chr1:212470864:A:G	rs12062234	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	212613682	212613683	chr1:212613683:T:C	rs11571537	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	212655827	212655828	chr1:212655828:A:G	rs2456826	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	6.525620950492726	4.5367630485795445	CCCAATTAAC
chr1	212708596	212708597	chr1:212708597:C:G	rs6695772	C	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.845053790848919	7.214270460494872	CCTAATTAGG
chr1	213320395	213320396	chr1:213320396:G:A	rs74626259	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	213984251	213984252	chr1:213984252:T:C	rs4140385	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	214236677	214236678	chr1:214236678:C:T	rs1795060	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr1	214311231	214311232	chr1:214311232:G:A	rs6540820	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.678572715728777	6.010851949025375	AGCAATTACC
chr1	214327276	214327277	chr1:214327277:A:G	rs11120298	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	214451896	214451897	chr1:214451897:T:C	rs148513026	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr1	214477273	214477274	chr1:214477274:C:T	rs74142711	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	214525752	214525753	chr1:214525753:C:T	rs938591506	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	215688762	215688763	chr1:215688763:T:C	rs2820696	T	C	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr1	215796673	215796674	chr1:215796674:T:C	rs12404720	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	215963530	215963531	chr1:215963531:C:T	rs571005	C	T	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	216431728	216431729	chr1:216431729:C:A	rs12723493	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	216485614	216485615	chr1:216485615:A:G	rs12757393	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.007267207914503	0.16670998349584357	TGTAATTAGC
chr1	216778564	216778565	chr1:216778565:G:A	chr1:216778565:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	216779750	216779751	chr1:216779751:C:G	rs12064264	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	216930315	216930316	chr1:216930316:T:C	rs6682369	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	217018678	217018679	chr1:217018679:T:C	rs11117750	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	217018696	217018697	chr1:217018697:C:T	rs11572435	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	217300595	217300596	chr1:217300596:T:A	rs12751523	T	A	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr1	218412478	218412479	chr1:218412479:C:T	rs2796821	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	218474043	218474044	chr1:218474044:T:C	rs623356	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	218879829	218879830	chr1:218879830:A:G	rs78964537	A	G	a	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	219660397	219660398	chr1:219660398:C:T	rs17006261	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr1	220477140	220477141	chr1:220477141:T:A	rs12043108	T	A	t	Hoxd3.mouse_homeodomain_1	9	1	+	6.540805396797378	6.288932777042308	GCCAATTAGT
chr1	220928430	220928431	chr1:220928431:G:A	rs75609948	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	221088156	221088157	chr1:221088157:T:G	rs9662259	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.663322844565413	6.3477151080945715	AGTAATTAAC
chr1	221393777	221393778	chr1:221393778:T:C	rs112725868	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	221640318	221640319	chr1:221640319:C:A	rs4450027	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	221640333	221640334	chr1:221640334:G:A	rs12026855	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.61045689473735	6.315340315567486	GGCAATTACC
chr1	221740743	221740744	chr1:221740744:G:C	rs3922386	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	221859142	221859143	chr1:221859143:C:T	rs12144971	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	6.466705306321288	6.306897804479197	CCCAATTAGC
chr1	221892366	221892367	chr1:221892367:T:C	rs7547751	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr1	222165593	222165594	chr1:222165594:T:A	rs727796	T	A	t	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	222414216	222414217	chr1:222414217:T:C	rs17461834	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	222710602	222710603	chr1:222710603:C:T	rs139024149	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	223010631	223010632	chr1:223010632:T:C	rs34258680	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	223275708	223275709	chr1:223275709:A:C	rs61837636	A	C	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	223480438	223480439	chr1:223480439:A:G	rs11261290	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	223515860	223515861	chr1:223515861:C:G	rs79681010	C	G	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	223665923	223665924	chr1:223665924:A:G	rs114001098	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	224212472	224212473	chr1:224212473:A:G	rs6682292	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	225422537	225422538	chr1:225422538:T:C	rs12141732	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.904037796958669	0.06348057254000908	ACCAATTAGC
chr1	225509592	225509593	chr1:225509593:T:C	rs1537877	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	225769168	225769169	chr1:225769169:C:T	rs528231610	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.741948279795344	6.357048598033734	ACCAATTAGG
chr1	225769180	225769181	chr1:225769181:T:C	rs2078389	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	226010804	226010805	chr1:226010805:A:T	rs12408868	A	T	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	226034934	226034935	chr1:226034935:C:A	rs4653703	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	226034955	226034956	chr1:226034956:G:A	rs4653704	G	A	G	Hoxd3.mouse_homeodomain_1	3	1	-	6.279477285346397	5.286862645827619	GCTCATTAGC
chr1	226363804	226363805	chr1:226363805:T:C	rs752308	T	C	t	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr1	226483563	226483564	chr1:226483564:C:T	rs61835459	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	226494125	226494126	chr1:226494126:A:G	rs4653747	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr1	226732206	226732207	chr1:226732207:C:T	rs10916030	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	226732208	226732209	chr1:226732209:A:C	rs10916031	A	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	227166833	227166834	chr1:227166834:C:T	rs2175789	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	227292792	227292793	chr1:227292793:A:G	rs58442442	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	227849576	227849577	chr1:227849577:C:T	rs11589239	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	228160270	228160271	chr1:228160271:G:C	rs200807370	G	C	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	228890662	228890663	chr1:228890663:A:G	rs1493079	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	228929195	228929196	chr1:228929196:T:A	rs34655218	T	A	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	229033074	229033075	chr1:229033075:A:C	rs7517398	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr1	229167283	229167284	chr1:229167284:A:G	rs2988735	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr1	229209106	229209107	chr1:229209107:G:C	rs74142341	G	C	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	229224676	229224677	chr1:229224677:G:A	rs938131200	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	229224683	229224684	chr1:229224684:A:G	rs35300548	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.277319169927424	3.4172227263666755	GGTCATTAGG
chr1	229696413	229696414	chr1:229696414:C:T	rs12139794	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	230109452	230109453	chr1:230109453:T:C	rs1022663	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	230171435	230171436	chr1:230171436:T:C	rs4846922	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.2190107174197315	7.150894896428305	AGTAATTACC
chr1	230268626	230268627	chr1:230268627:A:C	rs1041978757	A	C	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	230291711	230291712	chr1:230291712:A:C	rs12030266	A	C	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr1	230398491	230398492	chr1:230398492:A:G	rs73102039	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	230572115	230572116	chr1:230572116:G:T	rs80114319	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	230984908	230984909	chr1:230984909:T:C	rs7539695	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	231041946	231041947	chr1:231041947:A:C	rs12568043	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	231178112	231178113	chr1:231178113:T:C	rs1406869	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr1	231358069	231358070	chr1:231358070:C:T	rs114148441	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr1	231725407	231725408	chr1:231725408:C:T	rs140199458	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	231900398	231900399	chr1:231900399:A:G	rs860275	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr1	231972067	231972068	chr1:231972068:C:T	rs4658971	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	232177055	232177056	chr1:232177056:G:A	rs72748132	G	A	g	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	232384855	232384856	chr1:232384856:C:A	rs12086929	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	232576608	232576609	chr1:232576609:A:C	rs1285677	A	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	233166265	233166266	chr1:233166266:A:G	rs77709339	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr1	233343317	233343318	chr1:233343318:T:C	rs7526011	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.2190107174197315	0.3784534930010722	AGTAATTACC
chr1	233669957	233669958	chr1:233669958:T:G	rs701236	T	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	233843717	233843718	chr1:233843718:C:G	rs990764949	C	G	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	233843749	233843750	chr1:233843750:G:T	rs763415688	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	233991679	233991680	chr1:233991680:G:A	rs7515355	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	234135600	234135601	chr1:234135601:T:C	rs1463502	T	C	t	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	234258130	234258131	chr1:234258131:C:G	rs10797536	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	234291787	234291788	chr1:234291788:A:C	rs594349	A	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr1	234460455	234460456	chr1:234460456:T:A	rs270511	T	A	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr1	235304811	235304812	chr1:235304812:C:A	rs11582288	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	235591217	235591218	chr1:235591218:T:C	rs2841893	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr1	235591218	235591219	chr1:235591219:G:A	rs2774318	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr1	236016807	236016808	chr1:236016808:G:C	rs1543561	G	C	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr1	236252881	236252882	chr1:236252882:A:G	rs1749585	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	236417295	236417296	chr1:236417296:G:A	rs581722	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	236659842	236659843	chr1:236659843:C:T	rs662513	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	236689866	236689867	chr1:236689867:G:A	rs4659701	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.304615789157963	6.845053790848919	CCCAATTAGG
chr1	237961091	237961092	chr1:237961092:T:C	rs6429049	T	C	t	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr1	238009322	238009323	chr1:238009323:G:A	rs2487107	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr1	238312801	238312802	chr1:238312802:C:T	rs12142622	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	238312810	238312811	chr1:238312811:A:G	rs9658894	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr1	238607239	238607240	chr1:238607240:G:A	rs1393640	G	A	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	238688294	238688295	chr1:238688295:G:A	rs10802712	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.901879681539695	6.960795325711134	AGCAATTAGG
chr1	238952457	238952458	chr1:238952458:T:C	rs13374113	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	239133657	239133658	chr1:239133658:C:T	rs1912231	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	239674422	239674423	chr1:239674423:T:A	rs141348179	T	A	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	239719954	239719955	chr1:239719955:G:A	rs7511970	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr1	239786505	239786506	chr1:239786506:A:C	rs77464065	A	C	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr1	239795445	239795446	chr1:239795446:A:G	rs73127372	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	240242843	240242844	chr1:240242844:T:C	rs34743553	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	241501030	241501031	chr1:241501031:T:C	rs12085636	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	243514069	243514070	chr1:243514070:G:A	rs3006938	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	243554632	243554633	chr1:243554633:T:G	rs140310911	T	G	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr1	244211639	244211640	chr1:244211640:C:T	rs11810106	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr1	244450353	244450354	chr1:244450354:G:C	rs55897343	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	245044134	245044135	chr1:245044135:T:C	rs1572554	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	245092769	245092770	chr1:245092770:C:T	rs149817434	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr1	245365477	245365478	chr1:245365478:A:C	rs1173847	A	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr1	245513818	245513819	chr1:245513819:G:A	rs10924220	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr1	245715839	245715840	chr1:245715840:C:A	rs76465352	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	246003240	246003241	chr1:246003241:T:C	rs12563645	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.277319169927424	3.444368218757722	GGTCATTAGG
chr1	246006887	246006888	chr1:246006888:C:A	rs12732362	C	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.904037796958669	6.396248431999618	ACCAATTAGC
chr1	246070739	246070740	chr1:246070740:T:G	rs2787967	T	G	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	246678013	246678014	chr1:246678014:T:C	rs58719925	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr1	247078020	247078021	chr1:247078021:T:C	rs6701582	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr1	247295428	247295429	chr1:247295429:A:G	rs1771945	A	G	a	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	247295432	247295433	chr1:247295433:C:G	rs12026978	C	G	c	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	248433759	248433760	chr1:248433760:A:G	rs796160231	A	G	.	Hoxd3.mouse_homeodomain_1	4	1	+	6.901879681539695	4.041783237978947	AGCAATTAGG
chr1	248817484	248817485	chr1:248817485:T:C	rs7419176	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr10	333879	333880	chr10:333880:A:G	rs115705022	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	1162690	1162691	chr10:1162691:A:G	rs114595250	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	1201022	1201023	chr10:1201023:G:A	rs4880488	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr10	1553177	1553178	chr10:1553178:G:A	rs4528239	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.595207023573987	7.300090444404122	GGTAATTAAC
chr10	1553190	1553191	chr10:1553191:A:T	rs4631810	A	T	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	1581538	1581539	chr10:1581539:G:A	rs10903496	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr10	1642936	1642937	chr10:1642937:C:T	rs10903527	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	1649897	1649898	chr10:1649898:G:A	rs7895908	G	A	g	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	1788722	1788723	chr10:1788723:A:G	rs4627005	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	1856062	1856063	chr10:1856063:G:A	rs10903571	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	2068760	2068761	chr10:2068761:A:G	rs7908959	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	2068835	2068836	chr10:2068836:G:A	rs7895097	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr10	2214044	2214045	chr10:2214045:A:G	rs6560804	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	2380608	2380609	chr10:2380609:T:C	rs12761358	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	2592788	2592789	chr10:2592789:A:C	rs145635119	A	C	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr10	3127080	3127081	chr10:3127081:T:G	rs75020383	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr10	3132706	3132707	chr10:3132707:A:G	rs148941264	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	3198863	3198864	chr10:3198864:A:C	rs149700965	A	C	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr10	3476700	3476701	chr10:3476701:T:G	rs1543836	T	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	3768577	3768578	chr10:3768578:G:A	rs11252079	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	3786810	3786811	chr10:3786811:T:C	rs75158639	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.604407200393974	4.771456249224273	AGTAATTAGC
chr10	3786815	3786816	chr10:3786816:C:G	rs530142841	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	3854158	3854159	chr10:3854159:A:G	rs10795079	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	3902703	3902704	chr10:3902704:A:T	rs77453722	A	T	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.503391442821062	6.906251450341592	ACTAATTAAC
chr10	3924504	3924505	chr10:3924505:A:T	rs7901720	A	T	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	4338661	4338662	chr10:4338662:G:A	rs1571129	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	4649465	4649466	chr10:4649466:G:A	rs313454	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	4727789	4727790	chr10:4727790:T:C	rs115918824	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	5551181	5551182	chr10:5551182:C:T	rs550622724	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	5645079	5645080	chr10:5645080:A:G	rs11256695	A	G	a	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	5646323	5646324	chr10:5646324:A:G	rs10905799	A	G	N	Hoxd3.mouse_homeodomain_1	7	1	+	7.30929062122411	3.1527312198875004	AGTAATTAGT
chr10	5701968	5701969	chr10:5701969:C:T	rs552366285	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.901879681539695	6.234158914836294	AGCAATTAGG
chr10	5860208	5860209	chr10:5860209:A:T	rs78406658	A	T	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	5947990	5947991	chr10:5947991:C:G	rs11592245	C	G	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	6300892	6300893	chr10:6300893:A:G	rs17297184	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	6600264	6600265	chr10:6600265:C:T	rs72783741	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr10	6751898	6751899	chr10:6751899:G:A	rs4748360	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	6937124	6937125	chr10:6937125:T:A	rs117203417	T	A	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	7120241	7120242	chr10:7120242:A:G	rs755647	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	7187476	7187477	chr10:7187477:T:C	rs2762608	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.894837620138681	4.905979718225498	GCCAATTAAC
chr10	7411190	7411191	chr10:7411191:C:T	chr10:7411191:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	7411193	7411194	chr10:7411194:C:A	rs577214468	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr10	7489174	7489175	chr10:7489175:G:A	rs112148440	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr10	7657833	7657834	chr10:7657834:G:T	rs112073576	G	T	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	8439270	8439271	chr10:8439271:C:A	rs17143641	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.448367377574026	6.315340315567486	GGCAATTACG
chr10	8731958	8731959	chr10:8731959:G:T	rs17144396	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	8731961	8731962	chr10:8731962:G:A	rs113369422	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	9130479	9130480	chr10:9130480:C:T	rs17484061	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.732748102975356	6.208608681405544	GCCAATTAAG
chr10	9175610	9175611	chr10:9175611:C:T	rs1149954	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.007267207914503	6.339546441211103	TGTAATTAGC
chr10	9646288	9646289	chr10:9646289:G:T	rs17439187	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr10	9896417	9896418	chr10:9896418:T:G	rs2895009	T	G	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	10068770	10068771	chr10:10068771:T:C	rs78754925	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	10514952	10514953	chr10:10514953:A:T	rs11256641	A	T	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	10515909	10515910	chr10:10515910:G:T	rs1000039	G	T	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	10564259	10564260	chr10:10564260:C:T	rs77542540	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.61045689473735	6.315340315567486	GGCAATTACC
chr10	11144291	11144292	chr10:11144292:A:G	rs78956346	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.8337638605482685	3.9736674169875204	GGCAATTAGG
chr10	11159980	11159981	chr10:11159981:C:T	rs620521	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	11598875	11598876	chr10:11598876:C:G	rs923756	C	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	11612457	11612458	chr10:11612458:A:C	rs117787139	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	11640457	11640458	chr10:11640458:G:A	rs7100262	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	11640493	11640494	chr10:11640494:C:G	chr10:11640494:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	11671869	11671870	chr10:11671870:T:C	rs11257231	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr10	11738292	11738293	chr10:11738293:T:C	rs10752227	T	C	t	Hoxd3.mouse_homeodomain_1	5	1	+	6.678572715728777	-0.16198450868988265	AGCAATTACC
chr10	11738297	11738298	chr10:11738298:A:G	rs10795882	A	G	a	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	12258790	12258791	chr10:12258791:G:A	rs7916879	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	12324804	12324805	chr10:12324805:A:G	rs10906127	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	12340704	12340705	chr10:12340705:C:T	rs4354614	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr10	12373148	12373149	chr10:12373149:T:C	rs41325747	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	12410909	12410910	chr10:12410910:T:C	rs12774681	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	12513511	12513512	chr10:12513512:C:A	rs1077273	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	12513511	12513512	chr10:12513512:C:T	chr10:12513512:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	12544937	12544938	chr10:12544938:C:G	rs17493316	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr10	12704310	12704311	chr10:12704311:A:G	rs76442899	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	12959535	12959536	chr10:12959536:A:G	rs2580887	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr10	12959562	12959563	chr10:12959563:C:G	rs72777432	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	13587455	13587456	chr10:13587456:A:G	rs143770725	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	13650680	13650681	chr10:13650681:G:C	rs12264819	G	C	C	Hoxd3.mouse_homeodomain_1	2	1	-	6.8337638605482685	3.467106804138289	GGCAATTAGG
chr10	13683687	13683688	chr10:13683688:G:C	rs2399988	G	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	13945445	13945446	chr10:13945446:T:A	rs767227914	T	A	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr10	14591374	14591375	chr10:14591375:G:A	rs11259209	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	14617829	14617830	chr10:14617830:G:T	rs912909066	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	15236652	15236653	chr10:15236653:A:C	rs11259567	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	15483196	15483197	chr10:15483197:T:G	rs4750653	T	G	G	Hoxd3.mouse_homeodomain_1	4	1	-	6.995853377711593	4.54669790743674	GGCAATTAGC
chr10	16437650	16437651	chr10:16437651:C:T	rs2029398	C	T	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.450525492992999	6.990963494683954	GCCAATTACC
chr10	16563212	16563213	chr10:16563213:C:G	rs11254078	C	G	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	16789017	16789018	chr10:16789018:G:A	rs61844017	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	16847768	16847769	chr10:16847769:C:G	rs111819280	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	16866878	16866879	chr10:16866879:T:C	rs72771378	T	C	t	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	16905030	16905031	chr10:16905031:G:A	rs74116760	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	17005864	17005865	chr10:17005865:G:T	rs77520345	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	17101653	17101654	chr10:17101654:C:T	rs76716372	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	17267904	17267905	chr10:17267905:C:T	rs10904913	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.167074709756593	6.871958130586729	CGTAATTAGC
chr10	17507038	17507039	chr10:17507039:A:G	rs11254634	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	17573599	17573600	chr10:17573600:C:T	rs7904406	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	17761125	17761126	chr10:17761126:C:T	rs71497203	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	18010590	18010591	chr10:18010591:A:G	rs7893618	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	18362980	18362981	chr10:18362981:C:G	rs6482356	C	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr10	18668717	18668718	chr10:18668718:T:G	rs10741127	T	G	g	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	19017507	19017508	chr10:19017508:C:A	rs72785219	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	19428161	19428162	chr10:19428162:G:A	rs10763995	G	A	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	19480580	19480581	chr10:19480581:A:G	rs10764037	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	19544324	19544325	chr10:19544325:A:C	rs3844354	A	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	20180618	20180619	chr10:20180619:C:T	rs139626072	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr10	20682913	20682914	chr10:20682914:C:A	rs112381683	C	A	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	20990368	20990369	chr10:20990369:G:A	rs58569619	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	21798144	21798145	chr10:21798145:C:T	rs531764142	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.435275621829636	6.911136200259825	GCTAATTAAC
chr10	21975628	21975629	chr10:21975629:C:T	rs2807972	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr10	24727972	24727973	chr10:24727973:G:A	rs73606554	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	24909757	24909758	chr10:24909758:T:C	rs11014291	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	24917035	24917036	chr10:24917036:C:G	rs1409306	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	24928691	24928692	chr10:24928692:T:A	rs112526177	T	A	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	25068654	25068655	chr10:25068655:G:T	rs923757	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.845053790848919	6.712026728842379	CCTAATTAGG
chr10	26309953	26309954	chr10:26309954:G:A	rs60698538	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	26524383	26524384	chr10:26524384:T:G	rs787060	T	G	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	26534535	26534536	chr10:26534536:A:G	rs76542885	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	28442526	28442527	chr10:28442527:C:G	rs78001613	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	28838595	28838596	chr10:28838596:A:G	rs7078297	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr10	29110370	29110371	chr10:29110371:A:G	rs562930	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	29608251	29608252	chr10:29608252:C:T	rs1247423	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.61045689473735	6.260683345037421	GGCAATTACC
chr10	29776246	29776247	chr10:29776247:T:A	rs7093839	T	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	29863185	29863186	chr10:29863186:G:C	rs181425364	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	30002524	30002525	chr10:30002525:T:C	rs77394171	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	30002557	30002558	chr10:30002558:C:T	rs115334644	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr10	30088257	30088258	chr10:30088258:C:T	rs7069515	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	30488495	30488496	chr10:30488496:A:T	rs77844719	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	30549799	30549800	chr10:30549800:C:A	rs11008100	C	A	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr10	30565601	30565602	chr10:30565602:C:T	rs9804207	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	30565608	30565609	chr10:30565609:A:G	rs7477975	A	G	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr10	30596686	30596687	chr10:30596687:T:C	rs10826828	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	30785158	30785159	chr10:30785159:A:G	rs77803190	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	30785188	30785189	chr10:30785189:G:A	rs916975032	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr10	30816515	30816516	chr10:30816516:C:A	rs1030676201	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.8337638605482685	6.700736798541729	GGCAATTAGG
chr10	30816521	30816522	chr10:30816522:T:C	rs6481722	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.8337638605482685	4.844905958635086	GGCAATTAGG
chr10	31189242	31189243	chr10:31189243:G:A	rs74360807	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr10	31760200	31760201	chr10:31760201:G:T	rs138709252	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	31972797	31972798	chr10:31972798:T:G	rs11008710	T	G	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	32056781	32056782	chr10:32056782:G:A	rs211301	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	6.904037796958669	6.379898375388858	ACCAATTAGC
chr10	32171121	32171122	chr10:32171122:T:G	rs2998035	T	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr10	32171140	32171141	chr10:32171141:C:T	rs3006679	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.894837620138681	6.962953441130107	GCCAATTAAC
chr10	32338674	32338675	chr10:32338675:C:G	rs2505399	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	33136389	33136390	chr10:33136390:G:A	rs540115469	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr10	33331591	33331592	chr10:33331592:C:A	rs72790263	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.989302180477614	6.305231357163452	GGTAATTAGA
chr10	33401566	33401567	chr10:33401567:C:T	rs10740872	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr10	33507936	33507937	chr10:33507937:C:T	chr10:33507937:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	34058868	34058869	chr10:34058869:C:T	rs7900702	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	34124623	34124624	chr10:34124624:G:A	rs558666001	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr10	34199435	34199436	chr10:34199436:G:A	rs629039	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	34311057	34311058	chr10:34311058:T:C	rs1936429	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	34638372	34638373	chr10:34638373:T:C	rs2490812	T	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	34869908	34869909	chr10:34869909:A:C	rs4934520	A	C	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	35236902	35236903	chr10:35236903:G:T	rs34041571	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	35364971	35364972	chr10:35364972:A:G	rs74836341	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.741948279795344	3.881851836234596	ACCAATTAGG
chr10	35644549	35644550	chr10:35644550:C:T	rs10454470	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr10	35645127	35645128	chr10:35645128:G:C	chr10:35645128:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	35645132	35645133	chr10:35645133:A:C	chr10:35645133:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	35848747	35848748	chr10:35848748:A:G	rs16905746	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.007267207914503	6.466829206223548	TGTAATTAGC
chr10	35888126	35888127	chr10:35888127:C:T	rs12570791	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	36023303	36023304	chr10:36023304:C:G	rs11596792	C	G	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr10	36706789	36706790	chr10:36706790:C:A	rs76096374	C	A	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	37736220	37736221	chr10:37736221:T:C	rs991315027	T	C	.	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr10	39372819	39372820	chr10:39372820:C:T	rs1248522057	C	T	.	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	39372822	39372823	chr10:39372823:C:T	rs1287213432	C	T	.	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	41577186	41577187	chr10:41577187:C:G	rs1377445705	C	G	.	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	41584306	41584307	chr10:41584307:T:A	rs1490533102	T	A	.	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	41584308	41584309	chr10:41584309:T:A	chr10:41584309:T:A	T	A	.	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	41584310	41584311	chr10:41584311:A:G	chr10:41584311:A:G	A	G	.	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	42761313	42761314	chr10:42761314:C:A	rs515365	C	A	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	43043761	43043762	chr10:43043762:G:A	rs6593507	G	A	g	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	43086661	43086662	chr10:43086662:A:G	rs73266201	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	43304139	43304140	chr10:43304140:G:A	rs2505523	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	43647438	43647439	chr10:43647439:T:C	rs10793463	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	43702973	43702974	chr10:43702974:C:G	rs7914240	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	43781943	43781944	chr10:43781944:G:A	rs74436621	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.4444757986496235	7.149359219479759	ACTAATTAGC
chr10	44460955	44460956	chr10:44460956:A:C	rs1147941	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	44463755	44463756	chr10:44463756:C:A	rs1266391	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.44231768323065	7.30929062122411	AGTAATTAGG
chr10	44627930	44627931	chr10:44627931:T:C	rs11239177	T	C	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	44835447	44835448	chr10:44835448:T:G	rs1831671	T	G	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	44864452	44864453	chr10:44864453:G:A	rs79048912	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	44911153	44911154	chr10:44911154:G:A	rs114943584	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	44911159	44911160	chr10:44911160:T:C	rs2281841	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.054769021883032	4.194672578322284	GGCAATTAAC
chr10	45122579	45122580	chr10:45122580:C:G	rs6593460	C	G	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	45607522	45607523	chr10:45607523:T:C	rs4418752	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.904037796958669	4.915179895045487	ACCAATTAGC
chr10	48332966	48332967	chr10:48332967:C:T	chr10:48332967:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr10	48511934	48511935	chr10:48511935:C:A	rs1445155	C	A	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.466705306321288	4.663671365357515	CCCAATTAGC
chr10	48511935	48511936	chr10:48511936:A:T	rs1445154	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.466705306321288	4.377207974490711	CCCAATTAGC
chr10	48935269	48935270	chr10:48935270:A:C	chr10:48935270:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	48973558	48973559	chr10:48973559:G:A	rs113731795	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	49024958	49024959	chr10:49024959:T:C	rs61848154	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.433117506410662	6.892679504719707	GGTAATTAAG
chr10	49283361	49283362	chr10:49283362:C:G	rs140303879	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr10	49357529	49357530	chr10:49357530:G:A	rs2889792	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr10	49394569	49394570	chr10:49394570:T:C	rs998180112	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr10	49514922	49514923	chr10:49514923:A:C	rs4253077	A	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	49519309	49519310	chr10:49519310:T:C	rs2281792	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.894837620138681	0.05428039572002144	GCCAATTAAC
chr10	49615934	49615935	chr10:49615935:C:T	rs8178987	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.466705306321288	6.306897804479197	CCCAATTAGC
chr10	49618116	49618117	chr10:49618117:A:G	rs7091005	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	49664355	49664356	chr10:49664356:C:G	rs11101202	C	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	50224734	50224735	chr10:50224735:A:C	rs997413463	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.300090444404122	5.984482707933281	GGTAATTAAT
chr10	51314524	51314525	chr10:51314525:A:G	rs74133572	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	51390014	51390015	chr10:51390015:T:C	chr10:51390015:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.901879681539695	4.041783237978947	AGCAATTAGG
chr10	51950644	51950645	chr10:51950645:C:T	rs73337271	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr10	52269791	52269792	chr10:52269792:C:A	rs4935321	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr10	52818185	52818186	chr10:52818186:A:T	rs116336031	A	T	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr10	52818197	52818198	chr10:52818198:C:G	chr10:52818198:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.341301925657738	7.503391442821062	ACTAATTAAG
chr10	53491895	53491896	chr10:53491896:G:A	rs429497	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	53597137	53597138	chr10:53597138:T:G	rs6481025	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	53904265	53904266	chr10:53904266:G:A	rs7067725	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	55410746	55410747	chr10:55410747:T:C	rs115854228	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	57657715	57657716	chr10:57657716:C:T	rs7474675	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.241174800232684	7.300090444404122	GGTAATTAGT
chr10	57706789	57706790	chr10:57706790:A:G	rs11005909	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	58269578	58269579	chr10:58269579:C:G	rs569306580	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	59073544	59073545	chr10:59073545:T:C	rs80302597	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.960795325711134	4.100698882150386	AGCAATTAAG
chr10	59099649	59099650	chr10:59099650:T:C	rs12761351	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	59099650	59099651	chr10:59099651:A:G	rs192492330	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	59322582	59322583	chr10:59322583:C:T	rs284640	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	59595791	59595792	chr10:59595792:G:A	rs146605195	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	59733809	59733810	chr10:59733810:T:A	rs113277919	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	60030572	60030573	chr10:60030573:G:A	rs4528269	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	60141197	60141198	chr10:60141198:G:C	rs1011547159	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	60332153	60332154	chr10:60332154:A:G	rs12217173	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	60481064	60481065	chr10:60481065:A:T	rs11816019	A	T	a	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	60560864	60560865	chr10:60560865:C:G	rs117685611	C	G	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	60630499	60630500	chr10:60630500:A:G	rs2393676	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	6.892679504719707	4.9038216028065245	GGCAATTAAG
chr10	60780406	60780407	chr10:60780407:G:C	rs2260184	G	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	61163486	61163487	chr10:61163487:A:G	rs117737332	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr10	61163504	61163505	chr10:61163505:C:T	rs11818852	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.61045689473735	6.678572715728777	GGCAATTACC
chr10	61175023	61175024	chr10:61175024:C:T	rs141339256	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	61472556	61472557	chr10:61472557:T:C	rs76123450	T	C	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.273186104666311	7.214270460494872	GCTAATTAAG
chr10	61472561	61472562	chr10:61472562:T:C	rs74442578	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.273186104666311	5.284328202753129	GCTAATTAAG
chr10	61635873	61635874	chr10:61635874:C:A	rs61852663	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	61751547	61751548	chr10:61751548:G:A	rs57541197	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.433117506410662	7.501233327402089	GGTAATTAAG
chr10	61762899	61762900	chr10:61762900:A:T	rs2120702	A	T	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr10	61903802	61903803	chr10:61903803:A:G	rs72833334	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr10	61903832	61903833	chr10:61903833:C:A	rs553205940	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	62018214	62018215	chr10:62018215:G:A	rs73274369	G	A	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	62071741	62071742	chr10:62071742:T:G	rs12773075	T	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	62335645	62335646	chr10:62335646:G:A	rs7070288	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	62528832	62528833	chr10:62528833:A:G	rs2393892	A	G	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.30929062122411	7.604407200393974	AGTAATTAGT
chr10	62585040	62585041	chr10:62585041:T:C	rs76406857	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	62638705	62638706	chr10:62638706:C:T	rs10995251	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	63166721	63166722	chr10:63166722:C:T	rs4747045	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	63166740	63166741	chr10:63166741:G:A	rs192780904	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.300090444404122	6.632369677700721	GGTAATTAAT
chr10	63432670	63432671	chr10:63432671:T:C	rs10761767	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr10	64288584	64288585	chr10:64288585:C:G	rs899232519	C	G	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	65037149	65037150	chr10:65037150:C:T	rs10740183	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	6.448367377574026	6.0985938278740965	GGCAATTACG
chr10	65320591	65320592	chr10:65320592:C:T	rs4745872	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.225990353928032	6.558269587224632	CGTAATTAAC
chr10	65320610	65320611	chr10:65320611:T:A	rs1566852	T	A	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	65715291	65715292	chr10:65715292:A:T	rs7069163	A	T	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr10	66407132	66407133	chr10:66407133:G:C	rs1911484	G	C	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.466705306321288	6.081308823347045	CCCAATTAGC
chr10	66516697	66516698	chr10:66516698:T:C	rs10762073	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr10	66648191	66648192	chr10:66648192:T:C	rs2394263	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr10	66672122	66672123	chr10:66672123:G:C	rs2894017	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	66746929	66746930	chr10:66746930:C:T	rs72802605	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	66783090	66783091	chr10:66783091:T:C	rs4433472	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	66821700	66821701	chr10:66821701:T:A	rs12765148	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	67076018	67076019	chr10:67076019:T:G	rs2182162	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr10	67089462	67089463	chr10:67089463:G:A	rs10822972	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr10	67191268	67191269	chr10:67191269:G:A	rs7082948	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr10	67758930	67758931	chr10:67758931:C:T	rs11818251	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.732748102975356	6.3478484212137465	GCCAATTAAG
chr10	68407702	68407703	chr10:68407703:A:G	rs112234435	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	68526636	68526637	chr10:68526637:C:A	rs10998249	C	A	-	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	68586982	68586983	chr10:68586983:T:C	rs2298117	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	68864069	68864070	chr10:68864070:A:G	rs7088802	A	G	a	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr10	68872154	68872155	chr10:68872155:T:C	rs551476744	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.241174800232684	0.40061757581402435	GGTAATTAGT
chr10	68877173	68877174	chr10:68877174:T:C	rs189283756	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr10	69289341	69289342	chr10:69289342:T:C	rs5030916	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	69316796	69316797	chr10:69316797:C:G	rs7084213	C	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	69737079	69737080	chr10:69737080:G:T	rs34355431	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.904037796958669	5.101003855994896	ACCAATTAGC
chr10	70204717	70204718	chr10:70204718:A:G	rs10999179	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	70204719	70204720	chr10:70204720:A:G	rs10999180	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr10	70254482	70254483	chr10:70254483:G:A	rs11818439	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	70905589	70905590	chr10:70905590:C:T	rs10999576	C	T	c	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	71013837	71013838	chr10:71013838:T:G	rs7087586	T	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	71041404	71041405	chr10:71041405:A:G	rs117373330	A	G	G	Hoxd3.mouse_homeodomain_1	6	1	-	6.525620950492726	3.6926699993230256	CCCAATTAAC
chr10	71169219	71169220	chr10:71169220:T:C	rs72808435	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	71240928	71240929	chr10:71240929:T:C	rs10999742	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	71295244	71295245	chr10:71295245:G:A	rs12244208	G	A	g	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	71958134	71958135	chr10:71958135:A:G	rs12245721	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	72213484	72213485	chr10:72213485:A:T	rs76088137	A	T	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	72523113	72523114	chr10:72523114:T:A	rs12781793	T	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr10	73887803	73887804	chr10:73887804:G:A	rs543322204	G	A	g	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	73887815	73887816	chr10:73887816:G:A	rs190478558	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	+	7.004985192593269	6.3372644258898685	CGTAATTAGG
chr10	74071449	74071450	chr10:74071450:T:C	rs113195070	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	74071486	74071487	chr10:74071487:T:C	rs549587516	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr10	74178460	74178461	chr10:74178461:T:C	rs10824097	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	74437610	74437611	chr10:74437611:A:G	rs1904058	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr10	74950038	74950039	chr10:74950039:C:A	rs10762649	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	74989386	74989387	chr10:74989387:A:G	rs149611671	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	75140428	75140429	chr10:75140429:C:T	rs10509355	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.277319169927424	5.892419488165814	GGTCATTAGG
chr10	75660927	75660928	chr10:75660928:T:C	rs1318601309	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	76007735	76007736	chr10:76007736:T:C	rs4745805	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.962953441130107	6.904037796958669	ACCAATTAAC
chr10	76762133	76762134	chr10:76762134:T:C	rs860168	T	C	c	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	76868778	76868779	chr10:76868779:A:G	rs150095024	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	77160481	77160482	chr10:77160482:C:T	rs12220064	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	77160511	77160512	chr10:77160512:G:A	rs77282483	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	77163729	77163730	chr10:77163730:T:C	rs1516510	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.604407200393974	7.536291379402548	AGTAATTAGC
chr10	77221296	77221297	chr10:77221297:C:T	rs536297	C	T	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	77407185	77407186	chr10:77407186:G:A	rs75799758	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	77505804	77505805	chr10:77505805:T:C	rs714673	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	77633573	77633574	chr10:77633574:C:A	rs2619617	C	A	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	77633582	77633583	chr10:77633583:G:A	rs2673409	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	77772217	77772218	chr10:77772218:A:G	rs2579170	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	78331547	78331548	chr10:78331548:G:T	rs77990518	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr10	78416098	78416099	chr10:78416099:T:C	rs150688128	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	78470832	78470833	chr10:78470833:A:G	rs11597465	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr10	78470858	78470859	chr10:78470859:C:T	rs11593190	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.288435975829675	6.356551796821101	GCCAATTACG
chr10	78470868	78470869	chr10:78470869:G:A	rs2670192	G	A	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	78579150	78579151	chr10:78579151:C:T	rs164247	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	78610868	78610869	chr10:78610869:A:G	rs1434433	A	G	a	Hoxd3.mouse_homeodomain_1	7	1	+	6.741948279795344	2.5853888784587338	ACCAATTAGG
chr10	78624580	78624581	chr10:78624581:T:G	rs750680661	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	78736718	78736719	chr10:78736719:T:G	rs17459521	T	G	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	78746462	78746463	chr10:78746463:C:A	rs77178288	C	A	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	78962023	78962024	chr10:78962024:G:C	rs11002754	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.304615789157963	5.91921930618372	CCCAATTAGG
chr10	79366425	79366426	chr10:79366426:T:C	rs79494150	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	79479864	79479865	chr10:79479865:C:A	rs10824765	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	80016595	80016596	chr10:80016596:G:A	rs76231309	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr10	80177819	80177820	chr10:80177820:C:T	rs1018723452	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	80552068	80552069	chr10:80552069:C:T	rs12412927	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.374201862239223	7.433117506410662	GGTAATTAGG
chr10	80566712	80566713	chr10:80566713:G:C	rs34369840	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr10	81531914	81531915	chr10:81531915:G:C	rs7091000	G	C	g	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	81973164	81973165	chr10:81973165:T:C	rs10786788	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	82041506	82041507	chr10:82041507:C:A	rs11192265	C	A	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	82316975	82316976	chr10:82316976:G:T	rs11193663	G	T	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	82477872	82477873	chr10:82477873:A:G	rs10748994	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr10	82741210	82741211	chr10:82741211:C:G	rs17100651	C	G	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr10	83073725	83073726	chr10:83073726:G:T	rs10736241	G	T	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	83522644	83522645	chr10:83522645:C:T	rs2882098	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.273186104666311	7.341301925657738	GCTAATTAAG
chr10	83609506	83609507	chr10:83609507:C:A	chr10:83609507:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.894837620138681	6.38704825517963	GCCAATTAAC
chr10	83613694	83613695	chr10:83613695:A:G	rs2181835	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	83872775	83872776	chr10:83872776:T:C	rs1110421	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	83909360	83909361	chr10:83909361:G:T	rs12356297	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr10	83954435	83954436	chr10:83954436:T:A	rs11200746	T	A	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	84194520	84194521	chr10:84194521:C:A	rs1326806646	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	84891796	84891797	chr10:84891797:A:C	rs141580141	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	85204312	85204313	chr10:85204313:G:A	rs12774060	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr10	85525201	85525202	chr10:85525202:G:T	rs1912307	G	T	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	86297901	86297902	chr10:86297902:A:G	rs7094105	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr10	86339455	86339456	chr10:86339456:G:A	rs12415259	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr10	86579302	86579303	chr10:86579303:C:A	rs61858157	C	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	86824306	86824307	chr10:86824307:C:T	rs117392619	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	87692072	87692073	chr10:87692073:G:A	rs11202512	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr10	87744585	87744586	chr10:87744586:T:C	rs7902841	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	87744586	87744587	chr10:87744587:G:A	rs7913763	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	87867562	87867563	chr10:87867563:C:A	rs892673897	C	A	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr10	88043174	88043175	chr10:88043175:C:T	rs149093036	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	88951687	88951688	chr10:88951688:G:A	rs1228917295	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	89080559	89080560	chr10:89080560:C:T	rs11595318	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	89227806	89227807	chr10:89227807:T:G	rs2071510	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	89243046	89243047	chr10:89243047:C:T	rs1412445	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr10	89389121	89389122	chr10:89389122:A:G	rs304499	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	89952057	89952058	chr10:89952058:A:C	rs1936220	A	C	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	90306707	90306708	chr10:90306708:T:C	rs1570990	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr10	90344557	90344558	chr10:90344558:C:G	rs17518785	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr10	90919767	90919768	chr10:90919768:T:G	rs367611686	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.501233327402089	6.185625590931247	AGTAATTAAG
chr10	91683464	91683465	chr10:91683465:G:A	rs10786009	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr10	91756346	91756347	chr10:91756347:A:G	rs2421694	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr10	91797097	91797098	chr10:91797098:T:C	rs1341263	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	91799378	91799379	chr10:91799379:A:G	chr10:91799379:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	93463107	93463108	chr10:93463108:T:C	rs17391155	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	94386465	94386466	chr10:94386466:C:T	rs112566029	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	95944981	95944982	chr10:95944982:C:T	rs11188531	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr10	96362838	96362839	chr10:96362839:C:G	rs10882781	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr10	97406366	97406367	chr10:97406367:G:C	rs184019134	G	C	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	97731739	97731740	chr10:97731740:G:T	rs117596368	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	97731753	97731754	chr10:97731754:T:C	rs117414245	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.501233327402089	0.6606761029834289	AGTAATTAAG
chr10	98381269	98381270	chr10:98381270:T:C	rs10786414	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	98533942	98533943	chr10:98533943:T:G	rs898892	T	G	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.122884842874458	4.123498882911994	AGCAATTAAC
chr10	98646986	98646987	chr10:98646987:C:T	rs563060	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	100354705	100354706	chr10:100354706:A:C	rs3071	A	C	a	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	100881933	100881934	chr10:100881934:G:A	rs1467616	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	101022551	101022552	chr10:101022552:A:C	rs12265408	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.8337638605482685	3.8343779005858027	GGCAATTAGG
chr10	101558545	101558546	chr10:101558546:C:T	rs3127245	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr10	101848643	101848644	chr10:101848644:C:G	rs181211130	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.279477285346397	6.117387768183073	GCTCATTAGC
chr10	103091137	103091138	chr10:103091138:G:A	rs11191552	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	103151598	103151599	chr10:103151599:A:G	rs12775302	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr10	103451818	103451819	chr10:103451819:A:G	rs1446235468	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.214270460494872	4.381319509325171	GCTAATTAGG
chr10	103660763	103660764	chr10:103660764:T:G	chr10:103660764:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.595207023573987	7.150894896428305	GGTAATTAAC
chr10	103709540	103709541	chr10:103709541:G:A	rs73334719	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.279477285346397	5.984360706176533	GCTCATTAGC
chr10	103805147	103805148	chr10:103805148:C:G	rs79490543	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	104498705	104498706	chr10:104498706:A:C	rs11192084	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr10	104513018	104513019	chr10:104513019:A:C	rs139669867	A	C	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	104513054	104513055	chr10:104513055:A:G	rs10786801	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	104536567	104536568	chr10:104536568:G:A	rs1571456	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr10	104852882	104852883	chr10:104852883:G:C	rs17117755	G	C	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr10	105036158	105036159	chr10:105036159:C:G	chr10:105036159:C:G	C	G	c	Hoxd3.mouse_homeodomain_1	9	1	-	6.277319169927424	6.439408687090748	GGTCATTAGG
chr10	105138498	105138499	chr10:105138499:G:A	rs79899038	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	106399314	106399315	chr10:106399315:C:T	rs12217286	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	106740272	106740273	chr10:106740273:T:C	rs10884349	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	106778322	106778323	chr10:106778323:A:C	rs12256394	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr10	106781561	106781562	chr10:106781562:C:T	rs1538418	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr10	107141669	107141670	chr10:107141670:C:T	rs7916651	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	107179315	107179316	chr10:107179316:A:G	rs4085734	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr10	107496905	107496906	chr10:107496906:G:A	rs11596449	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.892679504719707	6.960795325711134	GGCAATTAAG
chr10	107536651	107536652	chr10:107536652:C:A	rs184170706	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.007267207914503	6.323196384600341	TGTAATTAGC
chr10	107553572	107553573	chr10:107553573:C:A	rs1441277	C	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	7.503391442821062	6.956402243896128	ACTAATTAAC
chr10	108202692	108202693	chr10:108202693:C:A	rs317465	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.9039694350203575	6.396180070061307	CCTAATTAAG
chr10	108398163	108398164	chr10:108398164:A:T	rs7091967	A	T	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr10	108598497	108598498	chr10:108598498:T:G	rs2482597	T	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	108753897	108753898	chr10:108753898:G:T	rs12258219	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr10	108912535	108912536	chr10:108912536:G:A	rs78778373	G	A	g	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	109839029	109839030	chr10:109839030:G:A	rs629146	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	109843100	109843101	chr10:109843101:C:T	rs58986055	C	T	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	109848918	109848919	chr10:109848919:C:T	rs685242	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.835921975967242	6.540805396797378	GCCAATTAGC
chr10	109961557	109961558	chr10:109961558:C:A	rs114415226	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	110204517	110204518	chr10:110204518:C:T	rs11195025	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.663322844565413	7.368206265395549	AGTAATTAAC
chr10	110438088	110438089	chr10:110438089:C:T	rs7085953	C	T	.	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	110513315	110513316	chr10:110513316:A:G	rs150788909	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.279477285346397	3.446526334176696	GCTCATTAGC
chr10	110610149	110610150	chr10:110610150:A:G	rs147307447	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	110643463	110643464	chr10:110643464:C:G	rs367757241	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	110643466	110643467	chr10:110643467:G:T	chr10:110643467:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	110730243	110730244	chr10:110730244:A:G	rs9971359	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	111392359	111392360	chr10:111392360:A:G	rs571442110	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	111861318	111861319	chr10:111861319:G:T	rs12263130	G	T	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr10	111970287	111970288	chr10:111970288:A:G	rs116349607	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	112406377	112406378	chr10:112406378:C:T	rs12258615	C	T	c	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr10	112798382	112798383	chr10:112798383:G:C	rs7082784	G	C	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	112843891	112843892	chr10:112843892:C:G	rs75635447	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr10	112899025	112899026	chr10:112899026:A:G	rs117337517	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr10	112962474	112962475	chr10:112962475:T:A	rs74159625	T	A	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	113021472	113021473	chr10:113021473:A:T	rs114393264	A	T	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr10	113131149	113131150	chr10:113131150:G:A	rs116754779	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	113398899	113398900	chr10:113398900:C:T	rs142194579	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	113400442	113400443	chr10:113400443:C:T	rs11196319	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	113442921	113442922	chr10:113442922:C:T	rs145547397	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.835921975967242	6.894837620138681	GCCAATTAGC
chr10	113762415	113762416	chr10:113762416:G:T	rs2419879	G	T	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	113953806	113953807	chr10:113953807:A:G	rs151591	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr10	113954630	113954631	chr10:113954631:C:T	rs11196557	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	114376579	114376580	chr10:114376580:A:G	rs482627	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr10	114479558	114479559	chr10:114479559:G:A	rs75969473	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr10	114657252	114657253	chr10:114657253:C:T	rs17092237	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	114663747	114663748	chr10:114663748:G:T	chr10:114663748:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	114867400	114867401	chr10:114867401:T:G	rs7094072	T	G	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr10	115026591	115026592	chr10:115026592:C:T	rs1438566775	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	115799511	115799512	chr10:115799512:C:T	rs538013112	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	115981300	115981301	chr10:115981301:G:A	rs117187189	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr10	116278899	116278900	chr10:116278900:A:G	rs71472887	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	116666645	116666646	chr10:116666646:G:T	rs142857872	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr10	117353745	117353746	chr10:117353746:A:G	rs4751623	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	117365757	117365758	chr10:117365758:T:C	rs570268413	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	117544544	117544545	chr10:117544545:T:C	rs385209	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr10	117743704	117743705	chr10:117743705:C:T	rs76753721	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.054769021883032	7.122884842874458	GGCAATTAAC
chr10	117804631	117804632	chr10:117804632:C:T	rs11198112	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	118457443	118457444	chr10:118457444:A:G	rs113103645	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	118850807	118850808	chr10:118850808:T:C	rs117041975	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	118928274	118928275	chr10:118928275:A:G	rs10886341	A	G	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	119061015	119061016	chr10:119061016:A:G	rs3824822	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	119102892	119102893	chr10:119102893:G:A	rs74157629	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr10	119310060	119310061	chr10:119310061:G:A	rs11817583	G	A	g	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	119414291	119414292	chr10:119414292:A:G	rs11198913	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr10	119414315	119414316	chr10:119414316:C:T	rs4752302	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.279477285346397	6.347593106337824	GCTCATTAGC
chr10	120116284	120116285	chr10:120116285:G:A	rs183884860	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr10	120176400	120176401	chr10:120176401:G:A	rs10788049	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.450525492992999	6.155408913823135	GCCAATTACC
chr10	120209461	120209462	chr10:120209462:G:A	rs61284747	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.663322844565413	7.368206265395549	AGTAATTAAC
chr10	120320181	120320182	chr10:120320182:T:A	rs4559604	T	A	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	120542729	120542730	chr10:120542730:C:T	rs10749377	C	T	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	6.707147650556478	AGTAATTACG
chr10	121139589	121139590	chr10:121139590:C:A	rs10430702	C	A	c	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	121435277	121435278	chr10:121435278:T:C	rs117653306	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	121457992	121457993	chr10:121457993:C:T	rs7079213	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.466705306321288	6.306897804479197	CCCAATTAGC
chr10	121664765	121664766	chr10:121664766:A:G	rs1693679	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	122294031	122294032	chr10:122294032:A:C	rs11200537	A	C	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	122483191	122483192	chr10:122483192:A:C	rs2736918	A	C	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.501233327402089	7.056921200256407	AGTAATTAAG
chr10	122496061	122496062	chr10:122496062:C:G	rs77571505	C	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	122510301	122510302	chr10:122510302:C:G	rs76357476	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	122570229	122570230	chr10:122570230:A:T	rs3740222	A	T	t	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr10	122573791	122573792	chr10:122573792:G:A	rs2277235	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.220683642931706	5.925567063761842	GGTAATGAGC
chr10	122638612	122638613	chr10:122638613:C:A	rs28410743	C	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	7.435275621829636	6.888286422904701	GCTAATTAAC
chr10	123299005	123299006	chr10:123299006:T:C	rs4980272	T	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr10	123458090	123458091	chr10:123458091:T:C	rs1219960	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	123566347	123566348	chr10:123566348:A:G	rs72836815	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.277319169927424	-0.5632380544912361	GGTCATTAGG
chr10	123706601	123706602	chr10:123706602:C:T	rs12779601	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr10	123903796	123903797	chr10:123903797:C:A	rs80113319	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	123909422	123909423	chr10:123909423:T:C	rs6599629	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr10	123925433	123925434	chr10:123925434:T:C	rs9794153	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr10	124118316	124118317	chr10:124118317:A:G	rs910505595	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	124127411	124127412	chr10:124127412:G:A	rs908515798	G	A	g	Hoxd3.mouse_homeodomain_1	8	1	-	6.288435975829675	5.938662426129746	GCCAATTACG
chr10	124223384	124223385	chr10:124223385:G:A	rs970719936	G	A	g	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	124355685	124355686	chr10:124355686:A:T	rs12769739	A	T	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr10	124395040	124395041	chr10:124395041:C:A	rs11244680	C	A	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	124478680	124478681	chr10:124478681:C:T	rs17620482	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr10	124568987	124568988	chr10:124568988:G:A	rs61870231	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	124607362	124607363	chr10:124607363:A:C	rs2061068	A	C	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	125150593	125150594	chr10:125150594:C:T	rs35668433	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.433117506410662	7.501233327402089	GGTAATTAAG
chr10	125283383	125283384	chr10:125283384:A:G	rs138930553	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	125283412	125283413	chr10:125283413:T:C	rs4962446	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr10	126225446	126225447	chr10:126225447:G:A	rs10901563	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.700736798541729	6.768852619533155	GGCAATTAGT
chr10	126807304	126807305	chr10:126807305:C:T	rs726667	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr10	126867979	126867980	chr10:126867980:C:A	rs112255324	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr10	126961141	126961142	chr10:126961142:G:T	rs996334692	G	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	6.9039694350203575	6.396180070061307	CCTAATTAAG
chr10	126961162	126961163	chr10:126961163:G:A	rs36180103	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	127039057	127039058	chr10:127039058:C:T	rs58652460	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.30929062122411	7.368206265395549	AGTAATTAGT
chr10	127063965	127063966	chr10:127063966:G:A	rs116030382	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	127090514	127090515	chr10:127090515:T:A	rs11016124	T	A	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	127557059	127557060	chr10:127557060:G:A	rs77738549	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	128064224	128064225	chr10:128064225:A:G	rs144992794	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	128064246	128064247	chr10:128064247:C:T	rs11819356	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	128275082	128275083	chr10:128275083:C:T	rs759133461	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	128361514	128361515	chr10:128361515:A:G	rs11599357	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	128463410	128463411	chr10:128463411:T:C	rs4750957	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr10	128950920	128950921	chr10:128950921:A:G	rs1452855	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr10	129281184	129281185	chr10:129281185:A:T	rs61859457	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	129495381	129495382	chr10:129495382:G:T	rs4751091	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.374201862239223	6.8451776907511785	GGTAATTAGG
chr10	129501893	129501894	chr10:129501894:G:C	rs78009284	G	C	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr10	129757042	129757043	chr10:129757043:G:A	rs114924132	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	129970716	129970717	chr10:129970717:C:T	chr10:129970717:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	130208164	130208165	chr10:130208165:A:G	rs6482777	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	6.304615789157963	4.315757887244781	CCCAATTAGG
chr10	130261842	130261843	chr10:130261843:C:G	rs7069495	C	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	130354324	130354325	chr10:130354325:G:A	rs55829954	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	130570205	130570206	chr10:130570206:C:T	rs74880370	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr10	130717336	130717337	chr10:130717337:A:G	rs1876314	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	130748919	130748920	chr10:130748920:T:C	rs4750827	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	131004466	131004467	chr10:131004467:G:A	rs74945492	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr10	131025822	131025823	chr10:131025823:G:A	rs61864586	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr10	131143865	131143866	chr10:131143866:C:T	rs11017746	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	131143896	131143897	chr10:131143897:T:C	rs11017747	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr10	131153774	131153775	chr10:131153775:A:G	rs2996077	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	131186307	131186308	chr10:131186308:T:C	rs115001093	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.241240225091396	3.381143781530649	CGCAATTACC
chr10	131186311	131186312	chr10:131186312:G:A	rs117659579	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.241240225091396	6.081432723249305	CGCAATTACC
chr10	131202056	131202057	chr10:131202057:C:T	rs2918132	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	131676720	131676721	chr10:131676721:A:C	rs58135109	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	131676721	131676722	chr10:131676722:T:C	rs375018383	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	131843665	131843666	chr10:131843666:G:A	rs9664890	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr10	132147459	132147460	chr10:132147460:G:A	rs78826594	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	132147464	132147465	chr10:132147465:C:T	rs73397670	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	132382466	132382467	chr10:132382467:G:A	rs11146352	G	A	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	132382477	132382478	chr10:132382478:C:T	rs142506766	C	T	c	Hoxd3.mouse_homeodomain_1	8	1	+	6.288435975829675	5.938662426129746	GCCAATTACG
chr10	132523635	132523636	chr10:132523636:C:T	rs4272721	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	132803597	132803598	chr10:132803598:C:T	rs2804018	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr10	133615790	133615791	chr10:133615791:G:T	rs4365009	G	T	.	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	133617613	133617614	chr10:133617614:A:G	rs4454678	A	G	.	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	353756	353757	chr11:353757:C:T	rs7947784	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.300090444404122	7.368206265395549	GGTAATTAAT
chr11	395498	395499	chr11:395499:G:A	rs73400565	G	A	g	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	1197867	1197868	chr11:1197868:A:G	rs35700114	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	1197891	1197892	chr11:1197892:C:T	rs28742281	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	2177187	2177188	chr11:2177188:G:T	rs11042978	G	T	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.0639691987030195	6.328799166028848	AGCAATTAGC
chr11	2433723	2433724	chr11:2433724:G:A	rs112969395	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.241240225091396	6.081432723249305	CGCAATTACC
chr11	2755578	2755579	chr11:2755579:C:T	rs7924946	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr11	2807279	2807280	chr11:2807280:G:A	rs151267023	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr11	2807294	2807295	chr11:2807295:C:T	rs72844287	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	3154952	3154953	chr11:3154953:A:G	rs73414550	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	3781577	3781578	chr11:3781578:T:C	rs61896897	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.700736798541729	3.8677858473720272	GGCAATTAGT
chr11	4430838	4430839	chr11:4430839:C:T	rs11603177	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr11	5247391	5247392	chr11:5247392:T:G	rs7483789	T	G	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr11	5691420	5691421	chr11:5691421:A:T	rs112046919	A	T	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	5761095	5761096	chr11:5761096:G:A	rs144166021	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	5815525	5815526	chr11:5815526:A:T	rs10838672	A	T	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	5815556	5815557	chr11:5815557:T:A	rs11039135	T	A	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr11	7422614	7422615	chr11:7422615:G:T	rs12799687	G	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.374201862239223	6.8451776907511785	GGTAATTAGG
chr11	7437054	7437055	chr11:7437055:C:T	rs4319496	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	7452229	7452230	chr11:7452230:G:C	rs78973467	G	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr11	7555086	7555087	chr11:7555087:T:C	rs7479626	T	C	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	7603596	7603597	chr11:7603597:A:G	rs78867408	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr11	7839022	7839023	chr11:7839023:G:T	rs114994140	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	7879933	7879934	chr11:7879934:C:T	rs2361067	C	T	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	8263447	8263448	chr11:8263448:T:C	rs204929	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr11	8263461	8263462	chr11:8263462:G:A	rs536362327	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr11	8671018	8671019	chr11:8671019:C:T	rs79052020	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr11	8909975	8909976	chr11:8909976:A:G	rs141414144	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr11	9314839	9314840	chr11:9314840:G:A	rs562079064	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr11	9516356	9516357	chr11:9516357:G:C	rs10743108	G	C	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr11	9689372	9689373	chr11:9689373:G:C	rs187652319	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	9757082	9757083	chr11:9757083:C:T	rs182665792	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	9906432	9906433	chr11:9906433:G:C	rs7930281	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	9909056	9909057	chr11:9909057:G:T	rs17271223	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	10481443	10481444	chr11:10481444:C:T	rs73409954	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	10617470	10617471	chr11:10617471:A:G	rs78093838	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	10848424	10848425	chr11:10848425:A:G	rs79600251	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	10927053	10927054	chr11:10927054:C:G	rs71476888	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	11532915	11532916	chr11:11532916:A:T	rs11021909	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.595207023573987	5.505709691743409	GGTAATTAAC
chr11	11568271	11568272	chr11:11568272:C:T	rs77877570	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr11	11575089	11575090	chr11:11575090:T:C	rs79021597	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr11	11865459	11865460	chr11:11865460:C:T	rs79798880	C	T	.	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	11995613	11995614	chr11:11995614:C:T	rs2035933	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	12029104	12029105	chr11:12029105:G:A	rs11022119	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr11	12029134	12029135	chr11:12029135:G:T	rs11606819	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	12201257	12201258	chr11:12201258:T:A	rs560397618	T	A	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr11	12201259	12201260	chr11:12201260:T:C	rs529110055	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr11	12642993	12642994	chr11:12642994:A:G	rs4316494	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	7.663322844565413	4.803226401004666	AGTAATTAAC
chr11	13041275	13041276	chr11:13041276:G:A	rs2727379	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	13261912	13261913	chr11:13261913:A:G	rs750188638	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr11	13927724	13927725	chr11:13927725:C:A	rs1354900	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	14981640	14981641	chr11:14981641:T:G	rs138069556	T	G	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr11	15175956	15175957	chr11:15175957:C:T	rs202203397	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	15213648	15213649	chr11:15213649:A:G	rs952425636	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr11	15731055	15731056	chr11:15731056:G:A	rs116262006	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	15929156	15929157	chr11:15929157:G:C	rs2615014	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	15987441	15987442	chr11:15987442:C:A	rs4757378	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.525620950492726	5.978631751567792	CCCAATTAAC
chr11	16204878	16204879	chr11:16204879:G:C	rs147166677	G	C	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr11	16403108	16403109	chr11:16403109:G:C	rs1503441	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr11	16934953	16934954	chr11:16934954:A:C	rs7104003	A	C	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	17208509	17208510	chr11:17208510:C:T	rs769571540	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr11	17366541	17366542	chr11:17366542:A:G	rs74579935	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	17439472	17439473	chr11:17439473:C:A	rs16934145	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.277319169927424	6.144292107920884	GGTCATTAGG
chr11	18104943	18104944	chr11:18104944:G:A	rs11024491	G	A	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	18104946	18104947	chr11:18104947:G:C	rs11024492	G	C	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	18669409	18669410	chr11:18669410:A:C	rs1277272114	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	19056505	19056506	chr11:19056506:G:A	rs10766524	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	19116848	19116849	chr11:19116849:T:C	rs11025022	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr11	19281812	19281813	chr11:19281813:G:A	rs7119923	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	19493190	19493191	chr11:19493191:T:C	rs12708340	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	3.881851836234596	ACCAATTAGG
chr11	19670670	19670671	chr11:19670671:G:A	rs1049700480	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	19827760	19827761	chr11:19827761:T:A	rs796122089	T	A	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.273186104666311	4.752575741312134	GCTAATTAAG
chr11	19827775	19827776	chr11:19827776:T:G	rs796674885	T	G	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	19913332	19913333	chr11:19913333:C:T	rs2707101	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	20000702	20000703	chr11:20000703:C:T	rs79797612	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr11	20000728	20000729	chr11:20000729:A:C	chr11:20000729:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.439408687090748	2.5323136289898143	GGTCATTAGC
chr11	20128374	20128375	chr11:20128375:A:G	chr11:20128375:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	20128397	20128398	chr11:20128398:A:T	rs777882774	A	T	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.464547190902314	4.336793298186909	CGCAATTAGG
chr11	20603840	20603841	chr11:20603841:G:A	rs2241942	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr11	20912977	20912978	chr11:20912978:T:C	rs80053329	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr11	21472651	21472652	chr11:21472652:A:G	rs4617576	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr11	21668328	21668329	chr11:21668329:G:T	rs11026152	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.304615789157963	6.171588727151423	CCCAATTAGG
chr11	21709160	21709161	chr11:21709161:C:T	rs2726125	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.685552352237077	6.525744850394987	CGCAATTAAC
chr11	21931736	21931737	chr11:21931737:G:A	rs7121300	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	7.056921200256407	6.389200433553007	AGTAATTACG
chr11	22644385	22644386	chr11:22644386:T:C	rs10833793	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr11	22730330	22730331	chr11:22730331:C:T	rs147250499	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.904037796958669	6.379898375388858	ACCAATTAGC
chr11	24093635	24093636	chr11:24093636:T:C	chr11:24093636:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	24093645	24093646	chr11:24093646:C:T	rs16912084	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.448367377574026	6.0985938278740965	GGCAATTACG
chr11	24755785	24755786	chr11:24755786:G:C	rs74358413	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	25242976	25242977	chr11:25242977:A:G	rs2042683	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.304615789157963	3.444519345597216	CCCAATTAGG
chr11	25424338	25424339	chr11:25424339:T:G	chr11:25424339:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	25745944	25745945	chr11:25745945:C:A	rs191259087	C	A	c	Hoxd3.mouse_homeodomain_1	1	1	+	7.376359977658197	6.868570612699147	GCTAATTAGC
chr11	26228750	26228751	chr11:26228751:A:G	rs1870758	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr11	26478872	26478873	chr11:26478873:T:A	rs2131697	T	A	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	26828281	26828282	chr11:26828282:A:C	rs118033479	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	26841907	26841908	chr11:26841908:G:C	rs118155620	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr11	27184078	27184079	chr11:27184079:T:C	rs532901519	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr11	27184093	27184094	chr11:27184094:A:T	rs76472113	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr11	27898413	27898414	chr11:27898414:A:G	rs7110491	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	28674787	28674788	chr11:28674788:G:T	rs112927153	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr11	29128151	29128152	chr11:29128152:T:A	rs769045	T	A	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr11	29265900	29265901	chr11:29265901:A:G	rs74596215	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr11	29293770	29293771	chr11:29293771:G:A	rs78602573	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.241174800232684	7.30929062122411	GGTAATTAGT
chr11	30535950	30535951	chr11:30535951:G:A	rs117025040	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	30639373	30639374	chr11:30639374:T:C	rs374539	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	32081727	32081728	chr11:32081728:C:G	rs2474162	C	G	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	32407431	32407432	chr11:32407432:A:G	rs7938016	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	32429118	32429119	chr11:32429119:G:A	rs5030161	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	32495806	32495807	chr11:32495807:G:A	rs7109478	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.892679504719707	6.507779822958097	GGCAATTAAG
chr11	32930259	32930260	chr11:32930260:C:T	rs112916324	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	34053831	34053832	chr11:34053832:T:C	rs149851408	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	34173607	34173608	chr11:34173608:T:A	rs7102200	T	A	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	34207441	34207442	chr11:34207442:A:G	rs2611136	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr11	34323893	34323894	chr11:34323894:C:T	rs7104186	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	34523769	34523770	chr11:34523770:G:A	rs3901901	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	34603691	34603692	chr11:34603692:C:T	rs286947	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	34635116	34635117	chr11:34635117:G:A	rs7945550	G	A	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr11	34841079	34841080	chr11:34841080:G:A	rs7124428	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	35044369	35044370	chr11:35044370:A:T	rs188085043	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	35088570	35088571	chr11:35088571:A:G	rs7131078	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	35275224	35275225	chr11:35275225:G:A	rs7105690	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	35401061	35401062	chr11:35401062:T:G	rs10836390	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	35450902	35450903	chr11:35450903:C:T	rs11033125	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.835921975967242	6.31178255439743	GCCAATTAGC
chr11	35553946	35553947	chr11:35553947:G:A	rs59100957	G	A	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.700736798541729	7.241174800232684	GGCAATTAGT
chr11	36154707	36154708	chr11:36154708:C:T	rs7111826	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	36165517	36165518	chr11:36165518:G:A	rs749945703	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.448367377574026	6.0985938278740965	GGCAATTACG
chr11	36274389	36274390	chr11:36274390:C:A	rs527931962	C	A	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr11	36931041	36931042	chr11:36931042:A:G	rs10836640	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	38401301	38401302	chr11:38401302:G:A	rs12361836	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr11	39817909	39817910	chr11:39817910:A:G	rs16933972	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.30929062122411	4.476339670054409	AGTAATTAGT
chr11	40446514	40446515	chr11:40446515:A:C	rs7944171	A	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr11	41826660	41826661	chr11:41826661:T:C	rs12803566	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.466705306321288	-0.3738519180973717	CCCAATTAGC
chr11	41873036	41873037	chr11:41873037:A:G	rs291713	A	G	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.439408687090748	5.898970685399792	GGTCATTAGC
chr11	42632595	42632596	chr11:42632596:A:T	rs7934937	A	T	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr11	42863602	42863603	chr11:42863603:T:C	rs10768895	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	42872302	42872303	chr11:42872303:A:C	rs10837955	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr11	42925989	42925990	chr11:42925990:A:T	rs1038673	A	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr11	43088282	43088283	chr11:43088283:T:C	rs1425850	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	43242770	43242771	chr11:43242771:T:C	rs735984	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	43907948	43907949	chr11:43907949:A:G	rs10838199	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr11	43918229	43918230	chr11:43918230:G:A	rs35660563	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr11	44005316	44005317	chr11:44005317:G:A	rs113287786	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	44005326	44005327	chr11:44005327:C:T	rs371169980	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	44556814	44556815	chr11:44556815:G:A	rs767411113	G	A	g	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	44637818	44637819	chr11:44637819:T:C	rs61878782	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr11	45026976	45026977	chr11:45026977:A:T	rs1028188194	A	T	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	45105231	45105232	chr11:45105232:T:C	rs875973	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.8337638605482685	4.844905958635086	GGCAATTAGG
chr11	45392631	45392632	chr11:45392632:G:A	rs1545466	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	5.898970685399792	5.231249918696392	GGCCATTAGC
chr11	45392641	45392642	chr11:45392642:G:C	rs1545467	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	45733161	45733162	chr11:45733162:A:G	rs2666898	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr11	46438487	46438488	chr11:46438488:C:T	rs2864076	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	46494351	46494352	chr11:46494352:A:G	rs3802888	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	46901555	46901556	chr11:46901556:C:T	rs61382645	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	46936256	46936257	chr11:46936257:G:A	rs7945558	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr11	47110329	47110330	chr11:47110330:A:G	rs11039097	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.960795325711134	4.100698882150386	AGCAATTAAG
chr11	47507290	47507291	chr11:47507291:T:C	rs76570755	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	47864988	47864989	chr11:47864989:T:G	rs12274437	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	47943809	47943810	chr11:47943810:T:A	rs12290628	T	A	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	47971662	47971663	chr11:47971663:T:C	rs118162918	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr11	48191435	48191436	chr11:48191436:C:T	rs7938715	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	48191449	48191450	chr11:48191450:G:C	rs12577881	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	49359439	49359440	chr11:49359440:A:C	rs80190465	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr11	56089831	56089832	chr11:56089832:C:G	rs17530416	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	56473402	56473403	chr11:56473403:G:A	rs624412	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr11	56879330	56879331	chr11:56879331:G:T	rs66501822	G	T	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	57094877	57094878	chr11:57094878:C:G	rs72914001	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.282386281486299	7.44231768323065	ACTAATTAGG
chr11	57667465	57667466	chr11:57667466:G:A	rs575628865	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr11	58219394	58219395	chr11:58219395:C:T	rs4245216	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.279477285346397	5.984360706176533	GCTCATTAGC
chr11	59161207	59161208	chr11:59161208:T:C	rs2154628	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	59388726	59388727	chr11:59388727:G:A	rs11229944	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr11	59681406	59681407	chr11:59681407:A:C	rs73486997	A	C	C	Hoxd3.mouse_homeodomain_1	3	1	+	7.2190107174197315	6.122128025107932	AGTAATTACC
chr11	59849664	59849665	chr11:59849665:G:A	rs17597092	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.6738324588039175	6.741948279795344	GCCAATTAGG
chr11	60753950	60753951	chr11:60753951:A:C	rs4938977	A	C	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	60887515	60887516	chr11:60887516:G:T	rs187850289	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	61095600	61095601	chr11:61095601:A:G	rs572310	A	G	g	Hoxd3.mouse_homeodomain_1	3	1	+	6.450525492992999	4.4616675910798165	GCCAATTACC
chr11	61162565	61162566	chr11:61162566:A:G	rs663292	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	61508235	61508236	chr11:61508236:G:A	rs779271587	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	62142854	62142855	chr11:62142855:T:A	rs563838831	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr11	62372399	62372400	chr11:62372400:C:A	rs7935912	C	A	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr11	62608355	62608356	chr11:62608356:G:A	rs78222742	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.277319169927424	5.609598403224022	GGTCATTAGG
chr11	62705758	62705759	chr11:62705759:G:C	rs191835830	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	62805918	62805919	chr11:62805919:G:A	rs142434559	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	62892715	62892716	chr11:62892716:G:A	rs118144210	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr11	63017739	63017740	chr11:63017740:G:C	rs117414340	G	C	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr11	63511148	63511149	chr11:63511149:C:G	rs2239679	C	G	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	63511153	63511154	chr11:63511154:G:A	rs78346459	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	63531467	63531468	chr11:63531468:C:T	rs75233837	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	63636000	63636001	chr11:63636001:A:G	rs117353672	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	63865664	63865665	chr11:63865665:A:G	rs7952270	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	64688675	64688676	chr11:64688676:G:A	rs55908299	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	64764466	64764467	chr11:64764467:C:G	rs566481127	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr11	64764467	64764468	chr11:64764468:A:T	rs535373619	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	65275662	65275663	chr11:65275663:T:G	chr11:65275663:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr11	65275849	65275850	chr11:65275850:G:A	rs79688041	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	65500333	65500334	chr11:65500334:T:C	rs148537350	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	65556804	65556805	chr11:65556805:C:T	rs11227223	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.374201862239223	6.989302180477614	GGTAATTAGG
chr11	65575227	65575228	chr11:65575228:G:C	rs1025064123	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	65811287	65811288	chr11:65811288:C:T	rs10896051	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	66638583	66638584	chr11:66638584:C:G	chr11:66638584:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	67382493	67382494	chr11:67382494:C:T	rs187667168	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	67635813	67635814	chr11:67635814:A:G	rs12800028	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	67811306	67811307	chr11:67811307:C:A	rs113290444	C	A	-	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	68341014	68341015	chr11:68341015:C:T	rs144258699	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	68585348	68585349	chr11:68585349:A:G	rs73506207	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	69511858	69511859	chr11:69511859:T:C	rs57700306	T	C	C	Hoxd3.mouse_homeodomain_1	7	1	-	6.8337638605482685	2.677204459211658	GGCAATTAGG
chr11	69615225	69615226	chr11:69615226:C:T	rs7948546	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	69640100	69640101	chr11:69640101:T:C	rs187210029	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	69822368	69822369	chr11:69822369:C:T	rs3895665	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr11	70005873	70005874	chr11:70005874:G:A	rs7101883	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.056921200256407	6.672021518494797	AGTAATTACG
chr11	70272144	70272145	chr11:70272145:T:G	rs670012	T	G	G	Hoxd3.mouse_homeodomain_1	3	1	-	7.501233327402089	6.404350635090289	AGTAATTAAG
chr11	70825581	70825582	chr11:70825582:G:A	rs78711146	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr11	71179997	71179998	chr11:71179998:G:A	rs7123288	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	71459858	71459859	chr11:71459859:T:C	rs12790558	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	71781571	71781572	chr11:71781572:T:C	rs6592326	T	C	t	Hoxd3.mouse_homeodomain_1	6	1	+	6.277319169927424	3.444368218757722	GGTCATTAGG
chr11	72112179	72112180	chr11:72112180:T:G	rs558483134	T	G	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	72118793	72118794	chr11:72118794:C:T	rs61696370	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr11	72965653	72965654	chr11:72965654:T:C	rs10898893	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	73116715	73116716	chr11:73116716:T:G	rs12419915	T	G	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	73127467	73127468	chr11:73127468:A:C	rs139395844	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.282386281486299	5.966778545015457	ACTAATTAGG
chr11	73430581	73430582	chr11:73430582:C:G	rs11823913	C	G	g	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	73579117	73579118	chr11:73579118:A:G	rs11235809	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr11	74413332	74413333	chr11:74413333:A:G	rs654028	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr11	75078413	75078414	chr11:75078414:C:T	rs78472272	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.304615789157963	6.144808287315873	CCCAATTAGG
chr11	75786708	75786709	chr11:75786709:G:A	chr11:75786709:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	76015743	76015744	chr11:76015744:C:G	rs7116263	C	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.063900836764708	7.433117506410662	CGTAATTAAG
chr11	76762660	76762661	chr11:76762661:C:T	rs1149599	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr11	76793653	76793654	chr11:76793654:G:A	rs10899282	G	A	g	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	77041424	77041425	chr11:77041425:C:T	rs61902094	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	5.898970685399792	5.957886329571231	GGCCATTAGC
chr11	77190978	77190979	chr11:77190979:G:A	rs4944148	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr11	77821376	77821377	chr11:77821377:T:G	chr11:77821377:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr11	78041465	78041466	chr11:78041466:C:G	rs7129673	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.214270460494872	7.374201862239223	GCTAATTAGG
chr11	78078132	78078133	chr11:78078133:G:A	rs61900222	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	78168541	78168542	chr11:78168542:G:A	rs142988635	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	78380794	78380795	chr11:78380795:G:A	rs115285045	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.063900836764708	6.396180070061307	CGTAATTAAG
chr11	78651173	78651174	chr11:78651174:T:C	rs12420711	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr11	78841879	78841880	chr11:78841880:C:T	rs77430853	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	79658816	79658817	chr11:79658817:C:T	rs538490	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	79859943	79859944	chr11:79859944:C:T	rs283315	C	T	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr11	80442764	80442765	chr11:80442765:A:G	rs2443952	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	80912081	80912082	chr11:80912082:A:C	rs35781267	A	C	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	81029224	81029225	chr11:81029225:A:C	rs11232437	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	81890357	81890358	chr11:81890358:A:C	rs4943857	A	C	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	82534065	82534066	chr11:82534066:C:T	rs1939642	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr11	82818961	82818962	chr11:82818962:C:A	rs11233326	C	A	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	83471833	83471834	chr11:83471834:G:C	rs138321212	G	C	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	83508894	83508895	chr11:83508895:T:A	rs12287103	T	A	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr11	83508934	83508935	chr11:83508935:C:G	rs10898129	C	G	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	83738726	83738727	chr11:83738727:C:A	rs72954544	C	A	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.374201862239223	6.8451776907511785	GGTAATTAGG
chr11	84103447	84103448	chr11:84103448:C:A	rs80004183	C	A	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	84127823	84127824	chr11:84127824:G:T	rs113779255	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr11	84825518	84825519	chr11:84825519:G:A	rs145543978	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	85076691	85076692	chr11:85076692:A:G	rs7102107	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	85242962	85242963	chr11:85242963:A:C	rs12281150	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	85837273	85837274	chr11:85837274:G:C	rs184994616	G	C	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr11	85939585	85939586	chr11:85939586:T:C	rs2508378	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	85939586	85939587	chr11:85939587:G:A	rs72949429	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	86152019	86152020	chr11:86152020:A:G	rs118144143	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	86274660	86274661	chr11:86274661:G:C	rs77102873	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr11	86274696	86274697	chr11:86274697:C:G	rs7105455	C	G	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	86773537	86773538	chr11:86773538:C:T	rs4269941	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	87372055	87372056	chr11:87372056:C:G	rs12795299	C	G	c	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr11	88042645	88042646	chr11:88042646:G:A	rs77412315	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	88297762	88297763	chr11:88297763:G:A	rs217112	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	88626738	88626739	chr11:88626739:G:A	rs1504083	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	88626750	88626751	chr11:88626751:G:A	rs12786297	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr11	88682363	88682364	chr11:88682364:T:C	rs12364535	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.678572715728777	-0.16198450868988265	AGCAATTACC
chr11	88710460	88710461	chr11:88710461:A:G	rs117856943	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	88979214	88979215	chr11:88979215:A:G	rs524874	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr11	89555144	89555145	chr11:89555145:T:C	rs2196501	T	C	.	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr11	90459650	90459651	chr11:90459651:A:T	rs493056	A	T	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	90836154	90836155	chr11:90836155:T:C	rs114825467	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	91218965	91218966	chr11:91218966:A:G	rs16915824	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr11	91650493	91650494	chr11:91650494:A:G	rs2568721	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	91854952	91854953	chr11:91854953:C:T	rs77434008	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	92500422	92500423	chr11:92500423:C:A	rs648386	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	92578921	92578922	chr11:92578922:C:T	rs1945519	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	93160487	93160488	chr11:93160488:A:T	rs1508607	A	T	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	93234830	93234831	chr11:93234831:G:T	chr11:93234831:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	93495375	93495376	chr11:93495376:T:C	rs11603560	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	93624987	93624988	chr11:93624988:A:G	rs4612756	A	G	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	93939769	93939770	chr11:93939770:G:A	rs34699227	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr11	94142320	94142321	chr11:94142321:A:T	rs7948455	A	T	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr11	94142321	94142322	chr11:94142322:T:A	rs7951456	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr11	94559602	94559603	chr11:94559603:A:G	rs11020832	A	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	94663354	94663355	chr11:94663355:A:C	rs7104326	A	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr11	94675192	94675193	chr11:94675193:C:T	rs611262	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	95219878	95219879	chr11:95219879:A:G	rs1054522	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	95444740	95444741	chr11:95444741:A:C	rs10430828	A	C	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	95964145	95964146	chr11:95964146:A:G	rs886379245	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	96132375	96132376	chr11:96132376:T:C	rs7111263	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	96176731	96176732	chr11:96176732:C:A	rs11021460	C	A	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr11	96447771	96447772	chr11:96447772:C:T	rs12798148	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr11	96447781	96447782	chr11:96447782:C:G	rs76599299	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	96706333	96706334	chr11:96706334:C:T	rs17129545	C	T	.	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	96708676	96708677	chr11:96708677:C:T	rs11212819	C	T	.	Hoxd3.mouse_homeodomain_1	8	1	-	6.901879681539695	6.960795325711134	AGCAATTAGG
chr11	96708703	96708704	chr11:96708704:G:A	rs75875346	G	A	.	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	96781218	96781219	chr11:96781219:A:C	rs12146648	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	96876655	96876656	chr11:96876656:A:G	rs17129665	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	97354545	97354546	chr11:97354546:G:A	rs12793135	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.523462835073753	5.855742068370352	CGCAATTAAG
chr11	97740343	97740344	chr11:97740344:T:C	rs11603467	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	97855677	97855678	chr11:97855678:C:T	rs2597595	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	98497763	98497764	chr11:98497764:A:T	rs1994087	A	T	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr11	99008405	99008406	chr11:99008406:A:C	rs11602973	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr11	99038396	99038397	chr11:99038397:T:C	rs6589857	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr11	99160624	99160625	chr11:99160625:T:G	rs11218585	T	G	t	Hoxd3.mouse_homeodomain_1	0	1	-	7.341301925657738	6.9039694350203575	ACTAATTAAG
chr11	99505623	99505624	chr11:99505624:C:A	rs61894112	C	A	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.374201862239223	6.8451776907511785	GGTAATTAGG
chr11	99738201	99738202	chr11:99738202:T:C	rs10790941	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	99988428	99988429	chr11:99988429:C:A	rs7129985	C	A	c	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	100559537	100559538	chr11:100559538:A:G	rs967032	A	G	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.732748102975356	6.6738324588039175	GCCAATTAAG
chr11	100731749	100731750	chr11:100731750:C:G	rs10895011	C	G	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	100823578	100823579	chr11:100823579:T:C	rs11605920	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.732748102975356	4.7438902010621735	GCCAATTAAG
chr11	101542290	101542291	chr11:101542291:G:A	rs7131328	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	101721649	101721650	chr11:101721650:G:C	rs11600201	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	102138980	102138981	chr11:102138981:T:G	chr11:102138981:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.595207023573987	4.595821063611522	GGTAATTAAC
chr11	102354396	102354397	chr11:102354397:C:A	rs61895375	C	A	c	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	102596559	102596560	chr11:102596560:A:T	rs10895321	A	T	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.433117506410662	5.0896455637559335	GGTAATTAAG
chr11	103378457	103378458	chr11:103378458:G:C	rs2408585	G	C	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr11	103588065	103588066	chr11:103588066:A:T	rs11225886	A	T	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	103730028	103730029	chr11:103730029:C:T	rs77726130	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.9039694350203575	6.379830013450546	CCTAATTAAG
chr11	103948760	103948761	chr11:103948761:A:G	rs61904869	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr11	103961865	103961866	chr11:103961866:C:T	rs73600279	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr11	104140218	104140219	chr11:104140219:A:G	rs79509484	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	104404113	104404114	chr11:104404114:T:C	rs4754112	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	104816977	104816978	chr11:104816978:T:C	rs7130562	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.700736798541729	2.544177397205119	GGCAATTAGT
chr11	106172198	106172199	chr11:106172199:T:C	rs4755128	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.732748102975356	3.872651659414608	GCCAATTAAG
chr11	107882166	107882167	chr11:107882167:G:T	rs73548843	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	107988601	107988602	chr11:107988602:C:T	rs57688334	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.450525492992999	5.926386071423187	GCCAATTACC
chr11	108221909	108221910	chr11:108221910:G:T	rs4987876	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr11	108835935	108835936	chr11:108835936:A:C	rs78497470	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	108835946	108835947	chr11:108835947:A:G	rs12802313	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.894837620138681	4.061886668968979	GCCAATTAAC
chr11	109038643	109038644	chr11:109038644:C:G	rs10789711	C	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr11	110192784	110192785	chr11:110192785:G:C	rs12802299	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	110541066	110541067	chr11:110541067:C:A	rs485051	C	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr11	110911726	110911727	chr11:110911727:A:C	rs10749968	A	C	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	111064091	111064092	chr11:111064092:G:A	rs17112181	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr11	111731113	111731114	chr11:111731114:A:G	rs144478206	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr11	112057290	112057291	chr11:112057291:A:G	rs73568040	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr11	112165425	112165426	chr11:112165426:A:G	rs360719	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	112271172	112271173	chr11:112271173:C:T	rs2564879	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr11	112271188	112271189	chr11:112271189:C:A	rs2564878	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	112401271	112401272	chr11:112401272:G:A	rs1525407	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	112911340	112911341	chr11:112911341:A:G	rs4937833	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr11	112961682	112961683	chr11:112961683:T:A	rs73002342	T	A	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr11	113137437	113137438	chr11:113137438:T:G	rs10891510	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr11	113178564	113178565	chr11:113178565:C:T	rs7111410	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	113253656	113253657	chr11:113253657:G:A	rs10891524	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	113565328	113565329	chr11:113565329:C:T	rs113490295	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.225990353928032	6.930873774758168	CGTAATTAAC
chr11	113972988	113972989	chr11:113972989:C:A	rs1176751	C	A	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	114285595	114285596	chr11:114285596:T:C	rs2604294	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr11	114478156	114478157	chr11:114478157:T:C	rs78651097	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr11	114739226	114739227	chr11:114739227:T:A	rs77106532	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	115581146	115581147	chr11:115581147:G:A	rs2446898	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.448367377574026	6.0985938278740965	GGCAATTACG
chr11	115674245	115674246	chr11:115674246:G:A	rs148049667	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	115674252	115674253	chr11:115674253:G:A	rs1616116	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	115691906	115691907	chr11:115691907:A:G	rs1784970	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr11	115920206	115920207	chr11:115920207:T:C	rs1784260	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.960795325711134	0.12023810129247414	AGCAATTAAG
chr11	116112367	116112368	chr11:116112368:C:T	rs78343635	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	116200597	116200598	chr11:116200598:T:C	rs1894067	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr11	116311558	116311559	chr11:116311559:A:G	rs11604300	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr11	116311586	116311587	chr11:116311587:C:T	rs10502216	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	116707500	116707501	chr11:116707501:C:G	rs12221682	C	G	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	116707506	116707507	chr11:116707507:C:T	rs10892019	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr11	117045458	117045459	chr11:117045459:G:A	rs17496758	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	117073631	117073632	chr11:117073632:G:A	rs7935913	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.960795325711134	6.293074559007732	AGCAATTAAG
chr11	117099915	117099916	chr11:117099916:A:T	rs4938337	A	T	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	117486192	117486193	chr11:117486193:C:G	rs11501117	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr11	117604129	117604130	chr11:117604130:G:A	rs61697909	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	117647322	117647323	chr11:117647323:T:C	rs626571	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.279477285346397	3.4193808417856495	GCTCATTAGC
chr11	118004177	118004178	chr11:118004178:C:T	rs78448682	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.518641313984426	5.994501892414615	ACCAATTACC
chr11	118019965	118019966	chr11:118019966:T:C	rs1939127	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	118058285	118058286	chr11:118058286:G:C	rs675539	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	118138563	118138564	chr11:118138564:G:T	rs10790240	G	T	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	118140174	118140175	chr11:118140175:G:C	rs640323	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.9039694350203575	7.066058952183682	CCTAATTAAG
chr11	118613086	118613087	chr11:118613087:A:G	rs72999455	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	119298846	119298847	chr11:119298847:C:G	rs528546144	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr11	119307339	119307340	chr11:119307340:C:G	rs1052121	C	G	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	119492451	119492452	chr11:119492452:A:G	rs917089178	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	119592141	119592142	chr11:119592142:A:G	rs11608077	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.007267207914503	0.16670998349584357	TGTAATTAGC
chr11	119592166	119592167	chr11:119592167:G:A	rs34211230	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	119635432	119635433	chr11:119635433:C:T	rs113236230	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr11	119781504	119781505	chr11:119781505:G:C	rs5026369	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	119793594	119793595	chr11:119793595:T:G	rs7928437	T	G	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.066058952183682	4.616903481908829	CCTAATTAAC
chr11	120057816	120057817	chr11:120057817:C:T	rs918251414	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	120143755	120143756	chr11:120143756:C:T	rs565302764	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.989302180477614	7.05741800146904	GGTAATTAGA
chr11	120569650	120569651	chr11:120569651:G:C	rs4310631	G	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	120658406	120658407	chr11:120658407:A:G	rs73580405	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	121367875	121367876	chr11:121367876:C:G	rs1560406	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	121367884	121367885	chr11:121367885:T:C	rs1560405	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	121627174	121627175	chr11:121627175:T:C	rs10892761	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.503391442821062	7.4444757986496235	ACTAATTAAC
chr11	121671841	121671842	chr11:121671842:T:G	rs73597368	T	G	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	121723136	121723137	chr11:121723137:T:C	rs148827623	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr11	121908758	121908759	chr11:121908759:T:C	rs1078402	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	121996991	121996992	chr11:121996992:T:C	rs2852836	T	C	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	122067818	122067819	chr11:122067819:T:G	rs4608085	T	G	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr11	122224996	122224997	chr11:122224997:C:G	rs78939541	C	G	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr11	122394493	122394494	chr11:122394494:A:G	rs685419	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr11	122441436	122441437	chr11:122441437:T:A	rs17126548	T	A	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr11	122519363	122519364	chr11:122519364:C:T	rs10892851	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr11	122696754	122696755	chr11:122696755:G:A	chr11:122696755:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	5.898970685399792	6.439408687090748	GGCCATTAGC
chr11	122727105	122727106	chr11:122727106:A:G	rs35714343	A	G	G	Hoxd3.mouse_homeodomain_1	2	1	-	7.273186104666311	6.732748102975356	GCTAATTAAG
chr11	122840654	122840655	chr11:122840655:C:T	rs59345946	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr11	123233097	123233098	chr11:123233098:T:G	rs73616409	T	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	123303061	123303062	chr11:123303062:G:A	rs541331662	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr11	123303070	123303071	chr11:123303071:A:G	rs373475806	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	123374706	123374707	chr11:123374707:G:T	rs186579478	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.279477285346397	5.732488086421463	GCTCATTAGC
chr11	123510229	123510230	chr11:123510230:C:T	rs7945117	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr11	123550944	123550945	chr11:123550945:G:A	rs1290807	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	123607797	123607798	chr11:123607798:A:C	rs1791996	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.44231768323065	3.601818506678582	AGTAATTAGG
chr11	123607798	123607799	chr11:123607799:G:A	rs1791724	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.44231768323065	7.501233327402089	AGTAATTAGG
chr11	123905710	123905711	chr11:123905711:G:C	rs75684615	G	C	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	123998875	123998876	chr11:123998876:C:T	rs61908589	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	124900169	124900170	chr11:124900170:T:C	rs75025641	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.341301925657738	6.800863923966783	ACTAATTAAG
chr11	125193210	125193211	chr11:125193211:C:T	rs10893347	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.678572715728777	6.328799166028848	AGCAATTACC
chr11	125276208	125276209	chr11:125276209:C:T	rs144560807	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr11	125392329	125392330	chr11:125392330:C:T	rs34000158	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr11	125978981	125978982	chr11:125978982:G:A	rs145157571	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	125994641	125994642	chr11:125994642:C:T	rs2298477	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.892679504719707	7.433117506410662	GGCAATTAAG
chr11	126099802	126099803	chr11:126099803:C:G	rs1368863	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	126099826	126099827	chr11:126099827:T:C	rs1347291	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr11	126214938	126214939	chr11:126214939:G:A	rs588361	G	A	g	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	126318186	126318187	chr11:126318187:T:A	rs3758824	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	126490629	126490630	chr11:126490630:G:A	rs1000255	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	126598079	126598080	chr11:126598080:G:T	rs482042	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	126647715	126647716	chr11:126647716:C:T	rs184321330	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	127028579	127028580	chr11:127028580:G:A	rs7945958	G	A	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	127117244	127117245	chr11:127117245:G:A	rs68046716	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	127628335	127628336	chr11:127628336:A:G	rs139373737	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	128139044	128139045	chr11:128139045:T:C	rs11221165	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	128174924	128174925	chr11:128174925:C:T	rs7948351	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	128219039	128219040	chr11:128219040:C:T	rs1793327	C	T	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	128235532	128235533	chr11:128235533:A:C	rs73574997	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr11	128295231	128295232	chr11:128295232:G:A	rs12419147	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr11	128417954	128417955	chr11:128417955:T:C	rs12274537	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr11	128423974	128423975	chr11:128423975:T:C	rs10750398	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	128533069	128533070	chr11:128533070:C:T	rs145437967	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr11	128730310	128730311	chr11:128730311:C:T	rs601466	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	128777529	128777530	chr11:128777530:A:G	rs675061	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	129608032	129608033	chr11:129608033:A:C	rs2172487	A	C	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	129814943	129814944	chr11:129814944:G:T	rs543640166	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	129852657	129852658	chr11:129852658:C:T	rs558813	C	T	c	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	129973682	129973683	chr11:129973683:A:G	rs4937474	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.518641313984426	3.658544870423678	ACCAATTACC
chr11	130596437	130596438	chr11:130596438:C:T	rs11222191	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	130625198	130625199	chr11:130625199:T:G	rs7126578	T	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr11	130953785	130953786	chr11:130953786:G:A	rs12275613	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	131196130	131196131	chr11:131196131:G:A	rs79610691	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	131248742	131248743	chr11:131248743:T:C	rs78558713	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr11	131421519	131421520	chr11:131421520:A:G	rs1011402	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr11	131483822	131483823	chr11:131483823:C:A	rs34214686	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	131817768	131817769	chr11:131817769:G:T	rs6590603	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	132078530	132078531	chr11:132078531:T:C	rs1790183	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr11	132095878	132095879	chr11:132095879:T:G	rs12292023	T	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	132245587	132245588	chr11:132245588:G:T	rs768613546	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	132327455	132327456	chr11:132327456:A:G	rs2029136	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr11	133728778	133728779	chr11:133728779:A:C	rs4245124	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.678572715728777	2.838073539176709	AGCAATTACC
chr11	133987582	133987583	chr11:133987583:T:C	rs329685	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	134377292	134377293	chr11:134377293:A:C	rs7113199	A	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr11	134391255	134391256	chr11:134391256:A:G	rs11223780	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	134742900	134742901	chr11:134742901:A:G	rs1011823508	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.341301925657738	6.800863923966783	ACTAATTAAG
chr11	134749625	134749626	chr11:134749626:C:G	rs1944882	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr11	134793931	134793932	chr11:134793932:A:G	rs10791392	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr11	134801983	134801984	chr11:134801984:T:C	rs10736617	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	83099	83100	chr12:83100:G:C	rs78310373	G	C	.	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr12	326072	326073	chr12:326073:T:C	rs3753158	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	602644	602645	chr12:602645:G:A	rs6489652	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	977238	977239	chr12:977239:C:T	rs111845237	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	1552488	1552489	chr12:1552489:G:C	rs34098662	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	1926510	1926511	chr12:1926511:C:T	rs183254622	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	2244313	2244314	chr12:2244314:G:A	rs898919366	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	2645030	2645031	chr12:2645031:A:T	rs1003306	A	T	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	3260308	3260309	chr12:3260309:G:C	rs142655819	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	3476542	3476543	chr12:3476543:A:G	rs979400	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr12	3671185	3671186	chr12:3671186:G:A	rs1990308	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr12	3868791	3868792	chr12:3868792:T:C	rs10505726	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.282386281486299	3.1258268801496887	ACTAATTAGG
chr12	4217107	4217108	chr12:4217108:A:G	rs7970659	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr12	4425792	4425793	chr12:4425793:A:G	rs11063150	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	4960930	4960931	chr12:4960931:C:G	rs75872755	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	5124658	5124659	chr12:5124659:G:A	rs2159402	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	5233273	5233274	chr12:5233274:G:A	rs10849217	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.835921975967242	6.540805396797378	GCCAATTAGC
chr12	5415395	5415396	chr12:5415396:C:A	rs4238023	C	A	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	5441171	5441172	chr12:5441172:T:C	rs66497710	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	6275277	6275278	chr12:6275278:C:T	rs111318081	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	6492813	6492814	chr12:6492814:C:G	rs4764600	C	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.8337638605482685	6.448367377574026	GGCAATTAGG
chr12	7372313	7372314	chr12:7372314:C:G	rs7302073	C	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	7642065	7642066	chr12:7642066:C:T	rs67060228	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr12	7923088	7923089	chr12:7923089:A:G	rs741361	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	7927234	7927235	chr12:7927235:C:G	rs114575011	C	G	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.435275621829636	7.273186104666311	GCTAATTAAC
chr12	8562485	8562486	chr12:8562486:G:T	rs78247542	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	8680815	8680816	chr12:8680816:C:G	rs113176089	C	G	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.288435975829675	6.6738324588039175	GCCAATTACG
chr12	8987290	8987291	chr12:8987291:T:C	rs10842665	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr12	9668879	9668880	chr12:9668880:C:T	rs180691311	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.220683642931706	5.925567063761842	GGTAATGAGC
chr12	9751755	9751756	chr12:9751756:A:C	rs2401397	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.732748102975356	5.417140366504515	GCCAATTAAG
chr12	10034022	10034023	chr12:10034023:G:A	rs4764208	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	10176427	10176428	chr12:10176428:C:G	rs139928129	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.448367377574026	6.8337638605482685	GGCAATTACG
chr12	10186433	10186434	chr12:10186434:T:C	rs1011918752	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.450525492992999	3.5904290494322515	GCCAATTACC
chr12	10395471	10395472	chr12:10395472:G:C	rs79199351	G	C	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr12	11461564	11461565	chr12:11461565:C:T	rs11054305	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	11870088	11870089	chr12:11870089:C:G	rs2071150	C	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr12	12452701	12452702	chr12:12452702:C:T	rs1030069	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.063900836764708	6.904093334922617	CGTAATTAAG
chr12	12605227	12605228	chr12:12605228:G:T	rs10743991	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr12	12732343	12732344	chr12:12732344:A:G	rs16908381	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.663322844565413	0.8227656201467538	AGTAATTAAC
chr12	12769388	12769389	chr12:12769389:A:C	rs7297457	A	C	C	Hoxd3.mouse_homeodomain_1	5	1	-	7.501233327402089	4.501847367439624	AGTAATTAAG
chr12	12769404	12769405	chr12:12769405:T:C	rs7300798	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	13049084	13049085	chr12:13049085:C:G	rs7294646	C	G	c	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr12	13174438	13174439	chr12:13174439:A:G	rs11055263	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	13367374	13367375	chr12:13367375:C:T	rs7131895	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.220683642931706	5.552962876228305	GGTAATGAGC
chr12	13573813	13573814	chr12:13573814:C:G	rs7953807	C	G	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	13677108	13677109	chr12:13677109:T:C	rs765687	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr12	14243377	14243378	chr12:14243378:C:A	rs7306933	C	A	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr12	14696645	14696646	chr12:14696646:G:A	rs3811173	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	14851605	14851606	chr12:14851606:C:A	rs2098434	C	A	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr12	15051034	15051035	chr12:15051035:T:G	rs7958565	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr12	15350470	15350471	chr12:15350471:A:G	rs56195914	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr12	15350473	15350474	chr12:15350474:A:C	rs56017619	A	C	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr12	15363274	15363275	chr12:15363275:T:C	rs73057259	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	15718650	15718651	chr12:15718651:T:C	rs10466858	T	C	t	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr12	15978544	15978545	chr12:15978545:C:A	rs115659759	C	A	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr12	18477193	18477194	chr12:18477194:C:T	rs10734678	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	18752549	18752550	chr12:18752550:T:C	rs547396541	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr12	19066861	19066862	chr12:19066862:C:G	rs373525197	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr12	19205428	19205429	chr12:19205429:G:A	rs16915171	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	19575208	19575209	chr12:19575209:G:C	chr12:19575209:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.439408687090748	6.279477285346397	GGTCATTAGC
chr12	19597829	19597830	chr12:19597830:A:G	rs6416207	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	19666077	19666078	chr12:19666078:A:G	rs10770517	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.678572715728777	6.61045689473735	AGCAATTACC
chr12	19717908	19717909	chr12:19717909:G:A	rs76551423	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr12	19847743	19847744	chr12:19847744:C:T	rs540013137	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	19847744	19847745	chr12:19847745:G:A	rs112340576	G	A	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	19945771	19945772	chr12:19945772:G:C	rs10770580	G	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	20050236	20050237	chr12:20050237:T:A	rs144185263	T	A	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	20056007	20056008	chr12:20056008:C:T	rs551875684	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr12	20274383	20274384	chr12:20274384:C:T	rs274963	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	20426004	20426005	chr12:20426005:C:T	rs11045236	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	20731003	20731004	chr12:20731004:G:A	rs12296191	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	22527916	22527917	chr12:22527917:A:T	rs11046459	A	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	23422717	23422718	chr12:23422718:A:G	rs7312798	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr12	23472699	23472700	chr12:23472700:C:A	rs11046932	C	A	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr12	24806018	24806019	chr12:24806019:C:T	rs7961506	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	25277254	25277255	chr12:25277255:C:A	rs80065338	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.663322844565413	6.979252021251251	AGTAATTAAC
chr12	25422169	25422170	chr12:25422170:T:C	rs12823912	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	25501510	25501511	chr12:25501511:A:C	rs16928967	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr12	25502587	25502588	chr12:25502588:C:T	rs10505967	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	25570571	25570572	chr12:25570572:G:C	rs12425623	G	C	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr12	25673730	25673731	chr12:25673731:A:G	rs1397604	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	26123824	26123825	chr12:26123825:A:G	rs7972225	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	26563904	26563905	chr12:26563905:T:A	rs55861094	T	A	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	26686813	26686814	chr12:26686814:A:G	rs10743591	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	26727553	26727554	chr12:26727554:G:A	rs73292398	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	26789929	26789930	chr12:26789930:C:T	rs61920587	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	26828160	26828161	chr12:26828161:G:A	rs12579861	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr12	27008268	27008269	chr12:27008269:C:T	rs7977991	C	T	t	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr12	27589732	27589733	chr12:27589733:T:C	rs10842944	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	27589745	27589746	chr12:27589746:T:G	rs16931579	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.523462835073753	2.6829636585216847	CGCAATTAAG
chr12	27650251	27650252	chr12:27650252:G:A	rs559098736	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr12	27906540	27906541	chr12:27906541:C:T	rs10843023	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr12	28024019	28024020	chr12:28024020:T:C	rs10843067	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	28129113	28129114	chr12:28129114:A:G	rs7305286	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr12	28313637	28313638	chr12:28313638:A:G	rs7310297	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.989302180477614	0.14874495605895416	GGTAATTAGA
chr12	28828109	28828110	chr12:28828110:A:G	rs10843248	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	29240391	29240392	chr12:29240392:T:C	rs67150462	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	29543289	29543290	chr12:29543290:C:T	rs79334411	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	29543322	29543323	chr12:29543323:G:C	rs73069592	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	29611277	29611278	chr12:29611278:C:A	rs1409615	C	A	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	29710352	29710353	chr12:29710353:C:T	rs77240243	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr12	30015096	30015097	chr12:30015097:T:G	rs10734779	T	G	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	30164137	30164138	chr12:30164138:A:G	rs7297032	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	30535888	30535889	chr12:30535889:G:A	rs74085562	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.894837620138681	7.435275621829636	GCCAATTAAC
chr12	31022032	31022033	chr12:31022033:G:A	rs73082862	G	A	g	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr12	31073373	31073374	chr12:31073374:G:A	rs28497345	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	31523982	31523983	chr12:31523983:T:C	rs73297842	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.066058952183682	0.22550172776502278	CCTAATTAAC
chr12	32151416	32151417	chr12:32151417:C:T	rs6488034	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	32271056	32271057	chr12:32271057:C:T	rs11051890	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr12	32471092	32471093	chr12:32471093:G:A	rs10844210	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	32664683	32664684	chr12:32664684:C:T	rs66895109	C	T	c	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	38472657	38472658	chr12:38472658:A:G	rs6580630	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	38628467	38628468	chr12:38628468:G:A	rs2653737	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.61045689473735	6.678572715728777	GGCAATTACC
chr12	39239755	39239756	chr12:39239756:T:C	rs4768676	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	39352519	39352520	chr12:39352520:G:C	rs78898476	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.989302180477614	6.603905697503371	GGTAATTAGA
chr12	39624024	39624025	chr12:39624025:C:T	rs77989694	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr12	39972384	39972385	chr12:39972385:A:G	rs73280629	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	40204541	40204542	chr12:40204542:A:T	rs1491940	A	T	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.960795325711134	4.1402089319258595	AGCAATTAAG
chr12	40332125	40332126	chr12:40332126:A:G	rs10878386	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.835921975967242	-0.0046352484514174674	GCCAATTAGC
chr12	40671551	40671552	chr12:40671552:T:A	rs11177713	T	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	7.30929062122411	7.05741800146904	AGTAATTAGT
chr12	41563858	41563859	chr12:41563859:T:C	rs73282231	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr12	41567446	41567447	chr12:41567447:C:T	rs117887121	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	42484513	42484514	chr12:42484514:C:A	rs141323312	C	A	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr12	42960453	42960454	chr12:42960454:G:A	rs78042423	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	43096113	43096114	chr12:43096114:A:C	rs1167144	A	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	43180396	43180397	chr12:43180397:A:G	rs11181913	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	43696868	43696869	chr12:43696869:G:A	rs1478614	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	43737893	43737894	chr12:43737894:T:C	rs10880557	T	C	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr12	43884665	43884666	chr12:43884666:G:A	rs1731423	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	43884685	43884686	chr12:43884686:A:G	rs2407782	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr12	44093116	44093117	chr12:44093117:C:T	rs75150414	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	45200404	45200405	chr12:45200405:A:C	rs12228733	A	C	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	45343092	45343093	chr12:45343093:G:A	rs575305115	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr12	46524694	46524695	chr12:46524695:C:T	rs58127062	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.678572715728777	6.010851949025375	AGCAATTACC
chr12	46891124	46891125	chr12:46891125:G:A	rs74504130	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	47293480	47293481	chr12:47293481:G:T	rs143326130	G	T	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	47870333	47870334	chr12:47870334:C:T	rs190067305	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr12	47938715	47938716	chr12:47938716:A:G	rs115764465	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	47938745	47938746	chr12:47938746:G:A	rs11168318	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	48002891	48002892	chr12:48002892:C:T	rs1051343440	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr12	48037413	48037414	chr12:48037414:A:G	rs58096169	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	49154406	49154407	chr12:49154407:G:A	rs2162644	G	A	a	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	49482899	49482900	chr12:49482900:C:T	rs11613509	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	49525184	49525185	chr12:49525185:C:G	rs559095986	C	G	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr12	49892271	49892272	chr12:49892272:G:A	rs905619	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	49909648	49909649	chr12:49909649:T:C	rs141087199	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.279477285346397	-0.5610799390722622	GCTCATTAGC
chr12	50083689	50083690	chr12:50083690:G:C	rs148054002	G	C	g	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	50129720	50129721	chr12:50129721:C:T	rs1554845	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr12	50400249	50400250	chr12:50400250:T:A	rs6580749	T	A	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	51217547	51217548	chr12:51217548:C:T	rs1204983970	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.167074709756593	6.499353943053193	CGTAATTAGC
chr12	51371562	51371563	chr12:51371563:C:T	rs566125857	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.44231768323065	6.7745969165272495	AGTAATTAGG
chr12	51424497	51424498	chr12:51424498:A:G	rs73095168	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr12	51931786	51931787	chr12:51931787:C:T	rs10431490	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	52061718	52061719	chr12:52061719:C:T	rs11835029	C	T	c	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	52190722	52190723	chr12:52190723:T:G	rs10735840	T	G	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	52192050	52192051	chr12:52192051:G:A	rs75411561	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr12	52251713	52251714	chr12:52251714:A:G	rs938496406	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	52262935	52262936	chr12:52262936:C:T	rs61914220	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	7.501233327402089	AGCAATTAAG
chr12	52431794	52431795	chr12:52431795:T:C	rs141511879	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	52444696	52444697	chr12:52444697:G:A	rs610794	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr12	52444736	52444737	chr12:52444737:G:C	rs618387	G	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	52606381	52606382	chr12:52606382:G:A	rs7979844	G	A	g	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	52620484	52620485	chr12:52620485:A:G	rs149795465	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	52662409	52662410	chr12:52662410:C:T	rs10876319	C	T	c	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	52870840	52870841	chr12:52870841:A:G	rs114553853	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr12	53441711	53441712	chr12:53441712:T:G	rs926993948	T	G	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr12	53567687	53567688	chr12:53567688:T:C	rs112581947	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr12	53567708	53567709	chr12:53567709:G:T	rs1247957	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	54018005	54018006	chr12:54018006:C:T	rs146096084	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	54522873	54522874	chr12:54522874:A:G	rs146123267	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr12	54522874	54522875	chr12:54522875:C:T	rs140107607	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	54608943	54608944	chr12:54608944:T:C	rs937309	T	C	t	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	54878399	54878400	chr12:54878400:A:C	rs2887909	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr12	54935169	54935170	chr12:54935170:C:T	rs2087245	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr12	55112583	55112584	chr12:55112584:T:C	rs10876700	T	C	t	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	55445846	55445847	chr12:55445847:G:C	rs7957446	G	C	-	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	56100037	56100038	chr12:56100038:A:C	rs2292238	A	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr12	56683341	56683342	chr12:56683342:G:A	rs985949306	G	A	g	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	57130440	57130441	chr12:57130441:A:C	rs11610923	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.904037796958669	3.063538620406601	ACCAATTAGC
chr12	57147481	57147482	chr12:57147482:C:T	rs2306692	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	57623917	57623918	chr12:57623918:T:G	rs7314152	T	G	G	Hoxd3.mouse_homeodomain_1	5	1	+	6.220683642931706	3.221297682969242	GGTAATGAGC
chr12	57850846	57850847	chr12:57850847:C:T	rs10783854	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	58071187	58071188	chr12:58071188:T:C	rs2720176	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr12	58491338	58491339	chr12:58491339:T:C	rs12823793	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	58918331	58918332	chr12:58918332:T:C	rs11172823	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr12	58960947	58960948	chr12:58960948:A:C	rs9669562	A	C	C	Hoxd3.mouse_homeodomain_1	5	1	-	6.448367377574026	3.44898141761156	GGCAATTACG
chr12	59150421	59150422	chr12:59150422:A:G	rs17122165	A	G	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.30929062122411	7.604407200393974	AGTAATTAGT
chr12	59891344	59891345	chr12:59891345:G:T	rs900859093	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.214270460494872	6.706481095535822	GCTAATTAGG
chr12	60173470	60173471	chr12:60173471:C:G	rs185204708	C	G	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	60173978	60173979	chr12:60173979:T:C	rs978912	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	60517688	60517689	chr12:60517689:T:C	rs11173504	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr12	60517726	60517727	chr12:60517727:C:A	rs12306180	C	A	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	60571596	60571597	chr12:60571597:A:G	rs61925000	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	61391584	61391585	chr12:61391585:A:G	rs1850155	A	G	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr12	61566380	61566381	chr12:61566381:G:A	rs73116061	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.241240225091396	6.081432723249305	CGCAATTACC
chr12	61911041	61911042	chr12:61911042:C:T	rs61940963	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr12	62695781	62695782	chr12:62695782:A:C	rs76878643	A	C	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr12	62847120	62847121	chr12:62847121:G:A	rs1498662	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr12	62898722	62898723	chr12:62898723:C:G	rs117678996	C	G	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	64006532	64006533	chr12:64006533:T:A	rs73317379	T	A	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.960795325711134	3.184096203894065	AGCAATTAAG
chr12	64336617	64336618	chr12:64336618:G:A	rs10878151	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	64594850	64594851	chr12:64594851:G:A	rs11612377	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	64894169	64894170	chr12:64894170:C:T	rs775183259	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr12	65576638	65576639	chr12:65576639:G:C	rs4762101	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	65642959	65642960	chr12:65642960:C:T	rs4762113	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr12	65826753	65826754	chr12:65826754:T:C	rs2293120	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	65827028	65827029	chr12:65827029:C:T	rs111788190	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	65911465	65911466	chr12:65911466:T:G	rs748840266	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr12	66501535	66501536	chr12:66501536:T:C	rs12813874	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	66837519	66837520	chr12:66837520:C:T	rs12309869	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr12	67220076	67220077	chr12:67220077:C:T	rs2918030	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	67362604	67362605	chr12:67362605:G:A	rs775650	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr12	67388078	67388079	chr12:67388079:T:C	rs7955266	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr12	67957402	67957403	chr12:67957403:G:C	rs11176969	G	C	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	68040635	68040636	chr12:68040636:C:A	rs184550606	C	A	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	68333716	68333717	chr12:68333717:G:A	rs75317527	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr12	69151671	69151672	chr12:69151672:G:A	rs117787389	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr12	69329785	69329786	chr12:69329786:G:A	rs10878965	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr12	69441182	69441183	chr12:69441183:T:C	rs10878989	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	69649471	69649472	chr12:69649472:G:A	rs111963394	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.2190107174197315	6.923894138249867	AGTAATTACC
chr12	69662734	69662735	chr12:69662735:G:A	rs775509	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	6.732748102975356	6.208608681405544	GCCAATTAAG
chr12	70259131	70259132	chr12:70259132:C:T	rs76608560	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	70555233	70555234	chr12:70555234:G:A	rs61758735	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	71787525	71787526	chr12:71787526:A:G	rs12310799	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr12	71859086	71859087	chr12:71859087:T:C	rs12316953	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	72330540	72330541	chr12:72330541:T:G	chr12:72330541:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.989302180477614	3.08220712237668	GGTAATTAGA
chr12	72433533	72433534	chr12:72433534:A:C	rs10879428	A	C	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	72748276	72748277	chr12:72748277:T:C	rs61933852	T	C	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr12	73153273	73153274	chr12:73153274:G:C	rs11179569	G	C	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	73769552	73769553	chr12:73769553:G:A	rs140781797	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	74533207	74533208	chr12:74533208:C:T	rs17113675	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	74619392	74619393	chr12:74619393:C:A	rs2605353	C	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	6.678572715728777	5.994501892414615	AGCAATTACC
chr12	74840658	74840659	chr12:74840659:C:G	rs144745913	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	75375270	75375271	chr12:75375271:T:G	chr12:75375271:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr12	75375275	75375276	chr12:75375276:T:G	chr12:75375276:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	75477483	75477484	chr12:75477484:A:G	rs17217158	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr12	75724702	75724703	chr12:75724703:A:G	rs114045515	A	G	a	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	75983940	75983941	chr12:75983941:T:A	rs7136267	T	A	A	Hoxd3.mouse_homeodomain_1	4	1	-	5.898970685399792	3.7712167926843874	GGCCATTAGC
chr12	76086408	76086409	chr12:76086409:T:C	rs73133169	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.536291379402548	6.995853377711593	GGTAATTAGC
chr12	76106749	76106750	chr12:76106750:C:G	rs61926813	C	G	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	76208438	76208439	chr12:76208439:G:A	rs17042110	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr12	76312573	76312574	chr12:76312574:A:G	rs61925230	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr12	77014460	77014461	chr12:77014461:A:G	rs437413	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr12	77760825	77760826	chr12:77760826:C:T	rs5019250	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	6.448367377574026	6.0985938278740965	GGCAATTACG
chr12	78018578	78018579	chr12:78018579:G:A	rs12427357	G	A	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr12	78193881	78193882	chr12:78193882:A:G	rs300504	A	G	a	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	78636584	78636585	chr12:78636585:A:G	rs531477804	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.214270460494872	6.6738324588039175	GCTAATTAGG
chr12	78636604	78636605	chr12:78636605:G:A	rs1043409145	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	78951948	78951949	chr12:78951949:A:G	chr12:78951949:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.4444757986496235	5.455617896736442	ACTAATTAGC
chr12	79251254	79251255	chr12:79251255:C:T	rs1245824	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.989302180477614	7.05741800146904	GGTAATTAGA
chr12	80807858	80807859	chr12:80807859:C:T	rs951043	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	82015779	82015780	chr12:82015780:T:G	rs10506858	T	G	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	82209591	82209592	chr12:82209592:A:G	rs12828940	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	82635677	82635678	chr12:82635678:C:T	rs35833339	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	83601241	83601242	chr12:83601242:G:A	rs682068	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	83657212	83657213	chr12:83657213:C:T	rs10437910	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	83930094	83930095	chr12:83930095:G:A	rs111401263	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	84582865	84582866	chr12:84582866:A:G	rs12312284	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr12	84637990	84637991	chr12:84637991:G:A	rs12821082	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr12	85748213	85748214	chr12:85748214:C:T	rs11117019	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	87440235	87440236	chr12:87440236:G:A	rs4590963	G	A	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr12	87440245	87440246	chr12:87440246:T:C	rs78122894	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.960795325711134	4.100698882150386	AGCAATTAAG
chr12	87801151	87801152	chr12:87801152:C:T	rs1436178	C	T	.	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	88036174	88036175	chr12:88036175:T:G	rs77665600	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	89060270	89060271	chr12:89060271:G:T	rs186288230	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.536291379402548	6.989302180477614	GGTAATTAGC
chr12	89454409	89454410	chr12:89454410:G:A	rs12581323	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.282386281486299	6.758246859916488	ACTAATTAGG
chr12	89471014	89471015	chr12:89471015:T:C	rs77453100	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr12	89471041	89471042	chr12:89471042:T:C	rs76547427	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	89733598	89733599	chr12:89733599:G:C	rs144449587	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.501233327402089	7.663322844565413	AGTAATTAAG
chr12	89970086	89970087	chr12:89970087:T:G	rs12369866	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	90833371	90833372	chr12:90833372:G:A	rs1847453	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr12	90959299	90959300	chr12:90959300:T:A	rs7975842	T	A	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	91098815	91098816	chr12:91098816:T:A	rs12823706	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	91422433	91422434	chr12:91422434:G:A	rs56176641	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr12	92002099	92002100	chr12:92002100:C:A	rs12826769	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr12	92002101	92002102	chr12:92002102:T:A	rs12828188	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr12	92732494	92732495	chr12:92732495:T:C	rs115014312	T	C	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.503391442821062	7.435275621829636	ACTAATTAAC
chr12	92912246	92912247	chr12:92912247:A:C	rs139028118	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	92912256	92912257	chr12:92912257:T:C	rs2244302	T	C	t	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	93004142	93004143	chr12:93004143:C:T	rs116408698	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.501233327402089	7.116333645640479	AGTAATTAAG
chr12	93503264	93503265	chr12:93503265:A:G	chr12:93503265:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr12	93577688	93577689	chr12:93577689:T:G	rs74774845	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	93624604	93624605	chr12:93624605:G:A	rs57409806	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	93936091	93936092	chr12:93936092:T:A	rs2362418	T	A	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	93957921	93957922	chr12:93957922:C:T	rs7303979	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	94300004	94300005	chr12:94300005:G:A	rs138428023	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	94300014	94300015	chr12:94300015:G:T	rs11107499	G	T	G	Hoxd3.mouse_homeodomain_1	6	1	+	6.220683642931706	7.536291379402548	GGTAATGAGC
chr12	94459336	94459337	chr12:94459337:C:T	rs61679133	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	94533095	94533096	chr12:94533096:G:A	rs78603996	G	A	g	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr12	94533135	94533136	chr12:94533136:A:C	chr12:94533136:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	94542122	94542123	chr12:94542123:C:T	rs4592484	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	94542123	94542124	chr12:94542124:A:G	rs4502040	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	94660666	94660667	chr12:94660667:T:G	rs76550740	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr12	94673456	94673457	chr12:94673457:T:G	rs7139075	T	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	94697543	94697544	chr12:94697544:C:T	rs7312912	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	94844563	94844564	chr12:94844564:C:T	rs6538559	C	T	.	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	95230799	95230800	chr12:95230800:G:A	rs10859855	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr12	95411275	95411276	chr12:95411276:A:G	rs2769436	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr12	95411285	95411286	chr12:95411286:G:A	rs2769437	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr12	95623341	95623342	chr12:95623342:T:C	rs35810048	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	95623901	95623902	chr12:95623902:C:T	rs17041204	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	95877879	95877880	chr12:95877880:G:T	rs879846	G	T	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	95923445	95923446	chr12:95923446:A:G	rs7965888	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	7.30929062122411	3.1527312198875004	AGTAATTAGT
chr12	95960676	95960677	chr12:95960677:G:C	rs2043608	G	C	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	96373308	96373309	chr12:96373309:C:T	rs73235115	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr12	97000912	97000913	chr12:97000913:A:C	rs7132498	A	C	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.341301925657738	6.9039694350203575	ACTAATTAAG
chr12	97276102	97276103	chr12:97276103:A:C	rs11108946	A	C	c	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	97305641	97305642	chr12:97305642:T:C	rs12581421	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	97804800	97804801	chr12:97804801:T:C	rs7316228	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr12	98448470	98448471	chr12:98448471:G:A	rs12582253	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	99114150	99114151	chr12:99114151:T:C	rs10777958	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr12	99138508	99138509	chr12:99138509:A:G	rs10735364	A	G	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	99383239	99383240	chr12:99383240:T:C	rs10777976	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr12	100017296	100017297	chr12:100017297:A:G	rs12371009	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr12	100017328	100017329	chr12:100017329:C:T	rs145595833	C	T	c	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	100185624	100185625	chr12:100185625:G:T	rs7954717	G	T	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	100268049	100268050	chr12:100268050:T:C	rs4565995	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	101767617	101767618	chr12:101767618:T:C	rs11111013	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	101855058	101855059	chr12:101855059:A:G	rs7138845	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr12	101921967	101921968	chr12:101921968:G:T	rs7135515	G	T	g	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	102814891	102814892	chr12:102814892:G:A	rs75517211	G	A	g	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	103284125	103284126	chr12:103284126:T:C	chr12:103284126:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.845053790848919	0.004496566430259086	CCTAATTAGG
chr12	104162942	104162943	chr12:104162943:G:C	rs11829709	G	C	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	104256649	104256650	chr12:104256650:A:C	rs118016094	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	104286882	104286883	chr12:104286883:G:T	rs10735393	G	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	104459544	104459545	chr12:104459545:A:G	rs78057832	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	104579929	104579930	chr12:104579930:G:A	rs2665742	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	105289205	105289206	chr12:105289206:T:A	chr12:105289206:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	105289205	105289206	chr12:105289206:T:G	rs11559871	T	G	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	105445797	105445798	chr12:105445798:T:C	rs1444242575	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	105445836	105445837	chr12:105445837:C:T	rs79921075	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr12	105562472	105562473	chr12:105562473:G:A	rs7300128	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	105736797	105736798	chr12:105736798:T:C	rs73399335	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	105898483	105898484	chr12:105898484:G:T	rs35669307	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	6.460278008989569	GGTAATTAGA
chr12	106078800	106078801	chr12:106078801:G:A	rs117844060	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.435275621829636	6.911136200259825	GCTAATTAAC
chr12	106506979	106506980	chr12:106506980:G:A	rs3851635	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	106581078	106581079	chr12:106581079:G:A	rs117734201	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	106649989	106649990	chr12:106649990:T:C	rs550613351	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	3.881851836234596	ACCAATTAGG
chr12	107318322	107318323	chr12:107318323:G:C	rs1861692	G	C	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	107738653	107738654	chr12:107738654:A:T	rs12227593	A	T	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr12	107749667	107749668	chr12:107749668:G:A	rs56332415	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr12	108044944	108044945	chr12:108044945:A:G	rs957843	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.845053790848919	3.9849573472881707	CCTAATTAGG
chr12	108215696	108215697	chr12:108215697:G:C	rs1544885	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr12	108392402	108392403	chr12:108392403:A:G	rs75510106	A	G	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr12	108561788	108561789	chr12:108561789:G:A	rs73404713	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	108752661	108752662	chr12:108752662:A:C	rs73408626	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	109259990	109259991	chr12:109259991:A:G	rs2075261	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr12	109317817	109317818	chr12:109317818:A:G	rs34487633	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr12	109544729	109544730	chr12:109544730:G:A	rs7953327	G	A	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	109720815	109720816	chr12:109720816:T:C	rs11831476	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	7.054769021883032	5.065911119969849	GGCAATTAAC
chr12	109725919	109725920	chr12:109725920:G:A	rs75921589	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr12	109838883	109838884	chr12:109838884:A:C	rs7963600	A	C	C	Hoxd3.mouse_homeodomain_1	7	1	+	6.220683642931706	2.3801844663796388	GGTAATGAGC
chr12	110301441	110301442	chr12:110301442:A:C	rs939521509	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	111057713	111057714	chr12:111057714:A:G	rs10849925	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	111325334	111325335	chr12:111325335:G:A	rs74495428	G	A	g	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	111643446	111643447	chr12:111643447:A:C	rs181534327	A	C	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	111643486	111643487	chr12:111643487:T:C	rs6416335	T	C	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	111664829	111664830	chr12:111664830:G:A	rs75694333	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	111764395	111764396	chr12:111764396:T:C	rs938081333	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr12	112307342	112307343	chr12:112307343:T:C	rs577120077	T	C	.	Hoxd3.mouse_homeodomain_1	7	1	-	6.540805396797378	2.384245995460768	GCCAATTAGT
chr12	112599012	112599013	chr12:112599013:A:G	rs17824050	A	G	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	112777646	112777647	chr12:112777647:T:G	rs3803061	T	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr12	113059023	113059024	chr12:113059024:T:G	rs1674089	T	G	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	113059026	113059027	chr12:113059027:G:A	rs34145403	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	113071822	113071823	chr12:113071823:C:T	rs10744794	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	113582612	113582613	chr12:113582613:G:A	rs147510965	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr12	113675399	113675400	chr12:113675400:C:T	rs55755325	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr12	113697966	113697967	chr12:113697967:C:T	rs111329535	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	113697993	113697994	chr12:113697994:C:T	rs10774711	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	113912785	113912786	chr12:113912786:C:T	rs190188621	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr12	114052137	114052138	chr12:114052138:G:C	rs7358632	G	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	114254054	114254055	chr12:114254055:C:G	rs1247934	C	G	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	114430867	114430868	chr12:114430868:C:T	rs7972393	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr12	114443600	114443601	chr12:114443601:A:G	rs1248034	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	114449924	114449925	chr12:114449925:T:C	rs16944310	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr12	114664676	114664677	chr12:114664677:A:C	rs11609105	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	114722253	114722254	chr12:114722254:G:C	rs7953394	G	C	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	114841804	114841805	chr12:114841805:T:C	rs7978393	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	114945580	114945581	chr12:114945581:G:A	rs10850410	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	115034684	115034685	chr12:115034685:A:G	rs35312	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr12	115262320	115262321	chr12:115262321:C:T	rs17692830	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	115512421	115512422	chr12:115512422:C:T	rs1874903	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr12	115894011	115894012	chr12:115894012:G:A	rs1344862	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.619588709619026	6.234689027857416	CGTAATTACG
chr12	116217690	116217691	chr12:116217691:T:C	rs61935854	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	116280931	116280932	chr12:116280932:C:G	rs2392972	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	116370996	116370997	chr12:116370997:G:A	rs193047514	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	116499082	116499083	chr12:116499083:C:T	rs2393041	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr12	116761113	116761114	chr12:116761114:G:A	rs10850710	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	117644891	117644892	chr12:117644892:G:A	rs115782787	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	117705700	117705701	chr12:117705701:T:C	rs17439358	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	117926438	117926439	chr12:117926439:C:T	rs60703208	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	118393152	118393153	chr12:118393153:A:G	rs521048	A	G	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.595207023573987	7.536291379402548	GGTAATTAAC
chr12	119664447	119664448	chr12:119664448:T:C	rs1978108	T	C	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	119668570	119668571	chr12:119668571:G:T	rs6490267	G	T	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr12	119828325	119828326	chr12:119828326:A:G	rs280582	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr12	120060089	120060090	chr12:120060090:T:G	rs76353928	T	G	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr12	120554597	120554598	chr12:120554598:C:T	rs3213565	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr12	121171104	121171105	chr12:121171105:G:A	rs2567989	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr12	121218166	121218167	chr12:121218167:A:T	rs1182945	A	T	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr12	121535074	121535075	chr12:121535075:T:A	rs553365143	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	121592663	121592664	chr12:121592664:C:T	rs28409019	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr12	121687090	121687091	chr12:121687091:A:C	chr12:121687091:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr12	121721130	121721131	chr12:121721131:A:G	rs2720027	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr12	121803056	121803057	chr12:121803057:A:G	chr12:121803057:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr12	122267434	122267435	chr12:122267435:T:C	rs57742919	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	122321691	122321692	chr12:122321692:T:C	rs11057514	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	122963380	122963381	chr12:122963381:T:C	rs4275659	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.0639691987030195	4.203872755142272	AGCAATTAGC
chr12	123138993	123138994	chr12:123138994:C:T	rs541474948	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr12	123268089	123268090	chr12:123268090:G:A	rs76514049	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	123310009	123310010	chr12:123310010:C:G	rs10846510	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	123475101	123475102	chr12:123475102:A:G	rs9723192	A	G	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.054769021883032	6.995853377711593	GGCAATTAAC
chr12	123696852	123696853	chr12:123696853:G:A	rs114141911	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.9888053792649805	6.603905697503371	GGTAATTACG
chr12	123795773	123795774	chr12:123795774:C:A	rs1114629	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	124126352	124126353	chr12:124126353:C:T	rs7136312	C	T	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr12	124159835	124159836	chr12:124159836:C:T	rs12581871	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr12	124233836	124233837	chr12:124233837:G:A	rs141100895	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.063900836764708	6.904093334922617	CGTAATTAAG
chr12	124233855	124233856	chr12:124233856:G:A	rs377139125	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	124388040	124388041	chr12:124388041:T:C	rs2660369	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr12	124695232	124695233	chr12:124695233:G:A	rs75946049	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	125140566	125140567	chr12:125140567:G:A	rs2297476	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	125272061	125272062	chr12:125272062:G:C	rs58918323	G	C	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	126030576	126030577	chr12:126030577:C:T	rs79563322	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	126034044	126034045	chr12:126034045:G:A	rs7303881	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	126742496	126742497	chr12:126742497:C:T	rs73234819	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	127808274	127808275	chr12:127808275:C:G	rs1237606	C	G	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	128243834	128243835	chr12:128243835:T:C	rs3938123	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	128684559	128684560	chr12:128684560:G:A	rs531684854	G	A	g	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr12	128838851	128838852	chr12:128838852:A:G	rs4760538	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	129176712	129176713	chr12:129176713:T:C	rs1352180	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.595207023573987	7.054769021883032	GGTAATTAAC
chr12	129483773	129483774	chr12:129483774:T:G	rs1021433	T	G	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr12	129531264	129531265	chr12:129531265:G:T	rs147477597	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr12	129610834	129610835	chr12:129610835:G:A	rs7973346	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	129720174	129720175	chr12:129720175:T:C	rs7977471	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.007267207914503	4.147170764353756	TGTAATTAGC
chr12	129807198	129807199	chr12:129807199:A:T	rs11060566	A	T	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr12	129839074	129839075	chr12:129839075:C:T	rs7307609	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.466705306321288	7.007143308012243	CCCAATTAGC
chr12	129910644	129910645	chr12:129910645:T:C	rs11608679	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr12	130175180	130175181	chr12:130175181:G:A	rs10848027	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.056921200256407	6.389200433553007	AGTAATTACG
chr12	130692399	130692400	chr12:130692400:A:G	rs729362	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	130741596	130741597	chr12:130741597:A:G	rs10848195	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	130741799	130741800	chr12:130741800:G:A	rs10848199	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr12	130922991	130922992	chr12:130922992:T:C	rs1534388	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	131116429	131116430	chr12:131116430:A:G	rs181991966	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	131452470	131452471	chr12:131452471:G:T	rs1007176290	G	T	g	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	131597784	131597785	chr12:131597785:C:T	rs4082223	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	131624849	131624850	chr12:131624850:T:C	rs1240784724	T	C	T	Hoxd3.mouse_homeodomain_1	9	1	+	7.300090444404122	7.595207023573987	GGTAATTAAT
chr12	131740437	131740438	chr12:131740438:T:G	rs59383017	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr12	132389493	132389494	chr12:132389494:G:A	rs71452511	G	A	g	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	132866236	132866237	chr12:132866237:C:T	rs118158105	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr13	19076283	19076284	chr13:19076284:C:A	rs61944523	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr13	20291111	20291112	chr13:20291112:A:G	rs6490541	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr13	20361217	20361218	chr13:20361218:A:G	rs9552153	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr13	20411308	20411309	chr13:20411309:G:A	rs9506481	G	A	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr13	20482399	20482400	chr13:20482400:C:T	rs7982082	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr13	20904251	20904252	chr13:20904252:C:T	rs61954218	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	21141032	21141033	chr13:21141033:G:A	rs187944138	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr13	21297627	21297628	chr13:21297628:C:G	rs372350357	C	G	.	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	21322573	21322574	chr13:21322574:A:G	rs35629490	A	G	G	Hoxd3.mouse_homeodomain_1	6	1	-	6.901879681539695	4.0689287303699935	AGCAATTAGG
chr13	21322594	21322595	chr13:21322595:G:A	rs35798228	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	21523490	21523491	chr13:21523491:C:T	rs12428749	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	22036573	22036574	chr13:22036574:A:G	rs148507290	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	22208769	22208770	chr13:22208770:C:T	rs7988392	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr13	22714144	22714145	chr13:22714145:G:A	rs448869	G	A	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	22968214	22968215	chr13:22968215:T:C	rs73161071	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr13	23059023	23059024	chr13:23059024:T:A	rs4281569	T	A	A	Hoxd3.mouse_homeodomain_1	3	1	-	6.448367377574026	4.358870045743448	GGCAATTACG
chr13	23067166	23067167	chr13:23067167:T:A	rs17286091	T	A	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr13	23196850	23196851	chr13:23196851:C:T	rs9580561	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	+	7.503391442821062	6.979252021251251	ACTAATTAAC
chr13	24006893	24006894	chr13:24006894:C:T	rs75757953	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr13	24274855	24274856	chr13:24274856:C:T	rs60704968	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.279477285346397	5.755337863776585	GCTCATTAGC
chr13	24293999	24294000	chr13:24294000:A:G	rs2901981	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr13	24748314	24748315	chr13:24748315:A:G	rs17081093	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr13	25116427	25116428	chr13:25116428:T:C	rs2994902	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr13	25120201	25120202	chr13:25120202:A:T	rs4491357	A	T	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	25159877	25159878	chr13:25159878:T:G	rs9511675	T	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr13	25424426	25424427	chr13:25424427:A:C	rs7986908	A	C	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr13	25502243	25502244	chr13:25502244:A:G	rs55734718	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr13	25585455	25585456	chr13:25585456:A:G	rs9581401	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.501233327402089	4.641136883841342	AGTAATTAAG
chr13	25689611	25689612	chr13:25689612:G:A	rs61947315	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	26522491	26522492	chr13:26522492:C:G	rs7993005	C	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr13	26529727	26529728	chr13:26529728:G:T	rs9512247	G	T	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	26592612	26592613	chr13:26592613:C:A	rs9512278	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr13	26816856	26816857	chr13:26816857:C:T	rs17084693	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	27028622	27028623	chr13:27028623:C:T	rs17085128	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	27288662	27288663	chr13:27288663:C:T	rs74042113	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	27902480	27902481	chr13:27902481:T:C	rs9319397	T	C	c	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr13	28041697	28041698	chr13:28041698:G:A	rs7327579	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	28794472	28794473	chr13:28794473:G:A	rs76125167	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	29096345	29096346	chr13:29096346:C:T	rs9506102	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.30929062122411	6.64156985452071	AGTAATTAGT
chr13	30134116	30134117	chr13:30134117:T:G	rs9506266	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr13	30144416	30144417	chr13:30144417:A:G	rs4769810	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr13	30212900	30212901	chr13:30212901:G:A	rs61946920	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr13	30360775	30360776	chr13:30360776:A:C	rs2152945	A	C	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr13	30428235	30428236	chr13:30428236:G:A	rs2892546	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	30615953	30615954	chr13:30615954:G:C	chr13:30615954:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	31114945	31114946	chr13:31114946:G:A	rs2057496	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.9888053792649805	6.6390318295650514	GGTAATTACG
chr13	31159057	31159058	chr13:31159058:G:A	rs7988806	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	31416364	31416365	chr13:31416365:C:T	rs187059964	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr13	31631289	31631290	chr13:31631290:C:T	rs113256957	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	31674356	31674357	chr13:31674357:A:G	rs1327985	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	32316089	32316090	chr13:32316090:G:T	rs9567552	G	T	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	32587973	32587974	chr13:32587974:A:C	rs7339124	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.9888053792649805	5.673197642794139	GGTAATTACG
chr13	33264496	33264497	chr13:33264497:G:A	rs77546410	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr13	33265020	33265021	chr13:33265021:G:T	rs55738907	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.279477285346397	5.771687920387347	GCTCATTAGC
chr13	33607002	33607003	chr13:33607003:C:G	rs7988253	C	G	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr13	33721112	33721113	chr13:33721113:C:T	rs114072590	C	T	c	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	33724798	33724799	chr13:33724799:C:T	rs9538453	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	33724809	33724810	chr13:33724810:A:C	rs1925091	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.341301925657738	3.5008027491056697	ACTAATTAAG
chr13	33927567	33927568	chr13:33927568:G:A	rs147062077	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.960795325711134	6.293074559007732	AGCAATTAAG
chr13	34347956	34347957	chr13:34347957:T:A	rs74048712	T	A	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	34477085	34477086	chr13:34477086:A:G	rs12429727	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	34546981	34546982	chr13:34546982:G:A	rs913692	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	34708937	34708938	chr13:34708938:A:G	rs1876582	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr13	34733700	34733701	chr13:34733701:C:A	rs1396308	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	34733710	34733711	chr13:34733711:T:C	rs1396307	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.007267207914503	6.466829206223548	TGTAATTAGC
chr13	34738441	34738442	chr13:34738442:C:T	rs9572246	C	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr13	35291274	35291275	chr13:35291275:A:C	rs73169719	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.44231768323065	6.126709946759808	AGTAATTAGG
chr13	35405868	35405869	chr13:35405869:C:T	rs9530540	C	T	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	35848551	35848552	chr13:35848552:G:A	rs148519572	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.700736798541729	6.768852619533155	GGCAATTAGT
chr13	36266252	36266253	chr13:36266253:G:C	rs9547036	G	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	36356125	36356126	chr13:36356126:C:A	rs9547431	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr13	36528129	36528130	chr13:36528130:A:G	rs1517894	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.960795325711134	6.892679504719707	AGCAATTAAG
chr13	37171370	37171371	chr13:37171371:T:C	rs2050567	T	C	-	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr13	37257127	37257128	chr13:37257128:T:C	rs1408227	T	C	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.960795325711134	6.901879681539695	AGCAATTAAG
chr13	37408275	37408276	chr13:37408276:G:A	rs1853329	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	37659232	37659233	chr13:37659233:T:C	rs9566247	T	C	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.30929062122411	6.768852619533155	AGTAATTAGT
chr13	38086157	38086158	chr13:38086158:G:A	rs77888082	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	38202911	38202912	chr13:38202912:T:G	rs2460317	T	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.435275621829636	6.990963494683954	GCTAATTAAC
chr13	38543032	38543033	chr13:38543033:C:A	rs1278079058	C	A	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	39336076	39336077	chr13:39336077:G:A	rs17444970	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	39496745	39496746	chr13:39496746:C:G	rs1927196	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	39516585	39516586	chr13:39516586:G:A	rs34001793	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr13	39516604	39516605	chr13:39516605:G:C	rs1927208	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	39787296	39787297	chr13:39787297:T:A	rs781147418	T	A	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	39958455	39958456	chr13:39958456:G:A	rs77837523	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr13	40002189	40002190	chr13:40002190:C:T	rs185398242	C	T	c	Hoxd3.mouse_homeodomain_1	8	1	+	6.619588709619026	6.269815159919097	CGTAATTACG
chr13	40194148	40194149	chr13:40194149:G:A	rs76471930	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	40221518	40221519	chr13:40221519:G:A	rs10161901	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr13	40352664	40352665	chr13:40352665:C:T	rs143376775	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	40565906	40565907	chr13:40565907:T:A	rs2180961	T	A	t	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr13	40682858	40682859	chr13:40682859:G:A	rs9315779	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.448367377574026	6.0985938278740965	GGCAATTACG
chr13	41020435	41020436	chr13:41020436:T:C	rs146843474	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.503391442821062	7.435275621829636	ACTAATTAAC
chr13	41562922	41562923	chr13:41562923:T:C	rs9562317	T	C	t	Hoxd3.mouse_homeodomain_1	0	1	-	7.341301925657738	7.273186104666311	ACTAATTAAG
chr13	41971937	41971938	chr13:41971938:T:G	rs7333778	T	G	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr13	42881473	42881474	chr13:42881474:A:T	rs9594827	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.894837620138681	4.374227256784503	GCCAATTAAC
chr13	42973701	42973702	chr13:42973702:G:C	rs1323865	G	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr13	43086641	43086642	chr13:43086642:G:T	rs879051	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	43180532	43180533	chr13:43180533:A:G	rs59670982	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.741948279795344	4.753090377882162	ACCAATTAGG
chr13	43237873	43237874	chr13:43237874:C:T	rs146059747	C	T	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	43296225	43296226	chr13:43296226:G:A	rs9525757	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	43307914	43307915	chr13:43307915:C:T	rs7319544	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr13	43307916	43307917	chr13:43307917:G:C	rs7319871	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	43461853	43461854	chr13:43461854:C:T	rs1998471	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	43763432	43763433	chr13:43763433:G:T	rs7321106	G	T	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	43945420	43945421	chr13:43945421:C:T	rs9533710	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	44126814	44126815	chr13:44126815:C:G	rs7996242	C	G	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.904037796958669	6.741948279795344	ACCAATTAGC
chr13	44191803	44191804	chr13:44191804:A:G	rs151306748	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.678572715728777	6.61045689473735	AGCAATTACC
chr13	44311452	44311453	chr13:44311453:A:G	rs17573850	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	7.0639691987030195	2.9074097973664097	AGCAATTAGC
chr13	44368144	44368145	chr13:44368145:C:T	rs557852612	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr13	45792957	45792958	chr13:45792958:A:G	rs17067211	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	45809155	45809156	chr13:45809156:A:G	rs9534222	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr13	45809176	45809177	chr13:45809177:C:G	rs9534223	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.61045689473735	6.450525492992999	GGCAATTACC
chr13	45852628	45852629	chr13:45852629:C:T	rs2404599	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr13	46531266	46531267	chr13:46531267:C:T	rs9534421	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr13	46554542	46554543	chr13:46554543:T:A	rs116739107	T	A	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr13	46796507	46796508	chr13:46796508:C:T	rs75967092	C	T	c	Hoxd3.mouse_homeodomain_1	0	1	-	6.277319169927424	6.34543499091885	GGTCATTAGG
chr13	47032902	47032903	chr13:47032903:T:G	rs191080950	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr13	47033624	47033625	chr13:47033625:C:T	rs2479984	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr13	48334804	48334805	chr13:48334805:G:C	rs117742879	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr13	48593606	48593607	chr13:48593607:T:G	rs11148110	T	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	48857692	48857693	chr13:48857693:G:A	rs10492514	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	49301201	49301202	chr13:49301202:G:A	rs118069964	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr13	49301203	49301204	chr13:49301204:C:T	rs138326312	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr13	50523201	50523202	chr13:50523202:G:C	rs758421323	G	C	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	50766178	50766179	chr13:50766179:A:G	rs592333	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr13	50800469	50800470	chr13:50800470:C:T	rs6561594	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr13	50800488	50800489	chr13:50800489:G:A	rs1323882	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.0639691987030195	6.768852619533155	AGCAATTAGC
chr13	51000278	51000279	chr13:51000279:C:A	rs3790027	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	51000279	51000280	chr13:51000280:G:A	rs3790026	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	51471030	51471031	chr13:51471031:A:G	rs112259726	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	51825523	51825524	chr13:51825524:G:A	rs80044028	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr13	52964979	52964980	chr13:52964980:T:A	rs6561697	T	A	A	Hoxd3.mouse_homeodomain_1	5	1	+	6.277319169927424	2.500620048110355	GGTCATTAGG
chr13	53327998	53327999	chr13:53327999:G:A	rs9536395	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.536291379402548	7.604407200393974	GGTAATTAGC
chr13	53379557	53379558	chr13:53379558:G:T	rs7328879	G	T	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	53405791	53405792	chr13:53405792:G:A	rs115847515	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	54029595	54029596	chr13:54029596:A:G	rs529019473	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	54706031	54706032	chr13:54706032:C:T	rs73193786	C	T	c	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	55414122	55414123	chr13:55414123:A:G	rs3124374	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	56779677	56779678	chr13:56779678:G:A	rs116956062	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	56779685	56779686	chr13:56779686:C:A	rs299516	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	57489232	57489233	chr13:57489233:T:G	rs1409244	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	58419550	58419551	chr13:58419551:G:A	rs78684255	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.700736798541729	6.7596524427131675	GGCAATTAGT
chr13	58850401	58850402	chr13:58850402:C:A	rs6561989	C	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr13	59891282	59891283	chr13:59891283:A:C	rs9570226	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	59922216	59922217	chr13:59922217:T:C	rs2780633	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr13	60627097	60627098	chr13:60627098:A:C	rs9570315	A	C	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr13	60629403	60629404	chr13:60629404:G:T	rs73210101	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	60668085	60668086	chr13:60668086:A:G	rs1576378	A	G	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.700736798541729	6.995853377711593	GGCAATTAGT
chr13	60880285	60880286	chr13:60880286:T:C	rs9570389	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	61557823	61557824	chr13:61557824:A:C	rs9539217	A	C	C	Hoxd3.mouse_homeodomain_1	8	1	+	7.066058952183682	6.6217468250380005	CCTAATTAAC
chr13	61670840	61670841	chr13:61670841:C:G	rs12868573	C	G	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr13	62207762	62207763	chr13:62207763:G:A	rs7982438	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr13	63066464	63066465	chr13:63066465:T:C	rs73199264	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	63066477	63066478	chr13:63066478:A:G	rs74084535	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	63438303	63438304	chr13:63438304:C:T	rs643438	C	T	t	Hoxd3.mouse_homeodomain_1	9	1	+	7.595207023573987	7.300090444404122	GGTAATTAAC
chr13	64152142	64152143	chr13:64152143:A:G	rs4406947	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	64556420	64556421	chr13:64556421:A:C	rs9528783	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	64705386	64705387	chr13:64705387:A:G	rs7982260	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr13	64705429	64705430	chr13:64705430:A:C	rs7982287	A	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	64991799	64991800	chr13:64991800:A:G	rs12429635	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	65404690	65404691	chr13:65404691:G:A	rs7983613	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr13	66064887	66064888	chr13:66064888:C:T	rs17080661	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	66138657	66138658	chr13:66138658:A:C	rs9529023	A	C	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr13	66138682	66138683	chr13:66138683:C:T	rs4884652	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	67547194	67547195	chr13:67547195:C:A	rs7981119	C	A	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr13	67778489	67778490	chr13:67778490:G:T	rs77079998	G	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	69199595	69199596	chr13:69199596:A:G	rs9564540	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	69199618	69199619	chr13:69199619:A:G	rs9572108	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.962953441130107	2.8063940397934974	ACCAATTAAC
chr13	69946687	69946688	chr13:69946688:A:G	rs116148422	A	G	a	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	69946705	69946706	chr13:69946706:T:G	rs74343642	T	G	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr13	70065600	70065601	chr13:70065601:C:A	rs1441573	C	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr13	70391836	70391837	chr13:70391837:G:C	rs79054124	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr13	71026484	71026485	chr13:71026485:A:C	rs7991801	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr13	72255494	72255495	chr13:72255495:A:G	rs17089105	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.150894896428305	4.290798452867557	GGTAATTACC
chr13	72489983	72489984	chr13:72489984:T:C	rs1924958	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	72490012	72490013	chr13:72490013:A:T	rs61971490	A	T	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	72808955	72808956	chr13:72808956:G:A	rs79395061	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	72843400	72843401	chr13:72843401:G:A	rs9573044	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	5.898970685399792	5.231249918696392	GGCCATTAGC
chr13	72959895	72959896	chr13:72959896:A:G	rs6562733	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	73039790	73039791	chr13:73039791:T:C	rs55761542	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr13	73253075	73253076	chr13:73253076:A:G	rs1028957	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	73626229	73626230	chr13:73626230:A:G	rs73228233	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr13	74246913	74246914	chr13:74246914:A:C	rs117217575	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	74251790	74251791	chr13:74251791:T:C	rs34708830	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr13	74295210	74295211	chr13:74295211:T:C	rs4885162	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.501233327402089	7.44231768323065	AGTAATTAAG
chr13	74743510	74743511	chr13:74743511:G:A	rs113487997	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr13	75178688	75178689	chr13:75178689:G:A	rs145357310	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	75330705	75330706	chr13:75330706:A:G	rs7991659	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	75459076	75459077	chr13:75459077:C:T	rs78743984	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	75459086	75459087	chr13:75459087:C:T	rs142478806	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	75545056	75545057	chr13:75545057:C:T	rs117823879	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.004985192593269	6.3372644258898685	CGTAATTAGG
chr13	75705110	75705111	chr13:75705111:T:C	rs73225951	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr13	76021099	76021100	chr13:76021100:T:C	rs7329761	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	76631233	76631234	chr13:76631234:G:A	rs7987795	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	76631238	76631239	chr13:76631239:A:T	rs7987356	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	76632088	76632089	chr13:76632089:T:A	rs4142424	T	A	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	76710826	76710827	chr13:76710827:T:C	rs9530590	T	C	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	76762800	76762801	chr13:76762801:G:A	rs17250584	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	76770237	76770238	chr13:76770238:G:C	rs115193159	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	77565911	77565912	chr13:77565912:C:T	rs488942	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr13	78460355	78460356	chr13:78460356:C:G	rs9318559	C	G	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr13	78547518	78547519	chr13:78547519:A:G	rs9544846	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr13	79140822	79140823	chr13:79140823:G:A	rs9544998	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	79157296	79157297	chr13:79157297:G:A	rs140547900	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	79270130	79270131	chr13:79270131:G:A	rs115067786	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr13	79270134	79270135	chr13:79270135:T:C	rs58277975	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.604407200393974	3.4478477990573646	AGTAATTAGC
chr13	79624393	79624394	chr13:79624394:C:T	rs73235984	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	80290908	80290909	chr13:80290909:G:A	rs76166597	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.44231768323065	7.501233327402089	AGTAATTAGG
chr13	81442689	81442690	chr13:81442690:A:G	rs1984107	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.214270460494872	6.6738324588039175	GCTAATTAGG
chr13	83499336	83499337	chr13:83499337:A:G	rs9546419	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	83716018	83716019	chr13:83716019:C:A	rs9546492	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	84640783	84640784	chr13:84640784:G:T	rs79178811	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.732748102975356	6.224958738016306	GCCAATTAAG
chr13	84645899	84645900	chr13:84645900:T:C	rs938670722	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr13	84645926	84645927	chr13:84645927:G:A	rs147996282	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	84737895	84737896	chr13:84737896:A:G	rs2949900	A	G	a	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	84978415	84978416	chr13:84978416:A:C	rs2496757	A	C	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr13	85724898	85724899	chr13:85724899:T:G	rs1538068	T	G	t	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr13	85724926	85724927	chr13:85724927:G:T	rs114469898	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	85990744	85990745	chr13:85990745:C:G	rs9594086	C	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr13	86974473	86974474	chr13:86974474:C:T	rs2781310	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	87127857	87127858	chr13:87127858:A:T	rs9524701	A	T	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	87390653	87390654	chr13:87390654:C:A	rs72639317	C	A	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	87671804	87671805	chr13:87671805:G:C	rs1367169119	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr13	87851641	87851642	chr13:87851642:G:A	rs78204543	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr13	87999627	87999628	chr13:87999628:C:A	rs549186267	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	88143842	88143843	chr13:88143843:A:G	rs9558480	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.501233327402089	7.433117506410662	AGTAATTAAG
chr13	89726923	89726924	chr13:89726924:C:T	rs77406932	C	T	c	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	90886940	90886941	chr13:90886941:C:A	rs9523163	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr13	91041974	91041975	chr13:91041975:T:G	rs76386927	T	G	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr13	91347241	91347242	chr13:91347242:T:A	rs1888138	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.374201862239223	5.2464479695238175	GGTAATTAGG
chr13	91361158	91361159	chr13:91361159:C:T	rs4142965	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr13	92066519	92066520	chr13:92066520:G:T	rs7321234	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr13	92187833	92187834	chr13:92187834:A:G	rs117154624	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr13	93075616	93075617	chr13:93075617:T:C	rs1444231	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	93730558	93730559	chr13:93730559:A:G	rs9524179	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr13	94346170	94346171	chr13:94346171:C:A	rs9516399	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.241174800232684	6.557103976918522	GGTAATTAGT
chr13	95226340	95226341	chr13:95226341:T:C	rs67685414	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	95300747	95300748	chr13:95300748:G:T	rs138341989	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr13	95300755	95300756	chr13:95300756:A:G	chr13:95300756:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr13	95380818	95380819	chr13:95380819:C:T	rs1171160528	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr13	95485043	95485044	chr13:95485044:A:G	rs6492797	A	G	a	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	95536996	95536997	chr13:95536997:C:T	rs145691256	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.273186104666311	6.7490466830965	GCTAATTAAG
chr13	95537024	95537025	chr13:95537025:A:G	rs149012655	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr13	95647408	95647409	chr13:95647409:C:T	rs12429254	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.700736798541729	6.0330160318383275	GGCAATTAGT
chr13	96111285	96111286	chr13:96111286:T:C	rs490753	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	97496597	97496598	chr13:97496598:G:A	rs7331217	G	A	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	98098683	98098684	chr13:98098684:G:A	rs34919413	G	A	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr13	98233235	98233236	chr13:98233236:T:C	rs9554455	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.341301925657738	0.5007447012390781	ACTAATTAAG
chr13	98348381	98348382	chr13:98348382:T:A	rs66917362	T	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr13	98420676	98420677	chr13:98420677:G:T	rs7981982	G	T	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	98512001	98512002	chr13:98512002:G:C	rs12146952	G	C	g	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	98574996	98574997	chr13:98574997:T:G	rs7989979	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	98584875	98584876	chr13:98584876:G:A	rs75324140	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	98646763	98646764	chr13:98646764:C:T	rs9556995	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	98799470	98799471	chr13:98799471:A:G	rs117798408	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr13	99199758	99199759	chr13:99199759:A:C	rs114270874	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.536291379402548	5.087135909127695	GGTAATTAGC
chr13	99254963	99254964	chr13:99254964:G:A	rs59722139	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr13	99272760	99272761	chr13:99272761:G:T	rs7318723	G	T	g	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	99467621	99467622	chr13:99467622:T:G	rs7317330	T	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	99847433	99847434	chr13:99847434:G:C	rs1886034	G	C	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	99854156	99854157	chr13:99854157:G:A	rs140670464	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	100139869	100139870	chr13:100139870:A:G	rs9585361	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.122884842874458	4.262788399313711	AGCAATTAAC
chr13	100270220	100270221	chr13:100270221:T:A	rs3902595	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.604407200393974	5.4766533076785695	AGTAATTAGC
chr13	100912748	100912749	chr13:100912749:C:T	rs9518210	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr13	101018487	101018488	chr13:101018488:T:A	rs80205525	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr13	101116706	101116707	chr13:101116707:A:C	rs17581878	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	101284656	101284657	chr13:101284657:G:A	rs9554768	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr13	101424541	101424542	chr13:101424542:G:A	rs117865702	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.732748102975356	6.3478484212137465	GCCAATTAAG
chr13	101841943	101841944	chr13:101841944:T:C	rs75186141	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr13	102045945	102045946	chr13:102045946:A:G	rs7332448	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr13	102467004	102467005	chr13:102467005:T:C	rs7318310	T	C	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr13	102761249	102761250	chr13:102761250:C:T	rs11839583	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	102914885	102914886	chr13:102914886:C:T	rs2146993	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr13	103349937	103349938	chr13:103349938:A:G	rs8002886	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.374201862239223	4.541250911069522	GGTAATTAGG
chr13	103539417	103539418	chr13:103539418:C:G	rs555372798	C	G	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	105160115	105160116	chr13:105160116:A:G	rs146329109	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.536291379402548	4.703340428232846	GGTAATTAGC
chr13	105170660	105170661	chr13:105170661:G:C	rs16966027	G	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr13	105196213	105196214	chr13:105196214:G:A	rs7320727	G	A	G	Hoxd3.mouse_homeodomain_1	3	1	-	6.279477285346397	5.286862645827619	GCTCATTAGC
chr13	105570038	105570039	chr13:105570039:A:G	rs1253835	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	105999298	105999299	chr13:105999299:T:C	rs4441125	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	105999311	105999312	chr13:105999312:G:T	rs4996815	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	106415474	106415475	chr13:106415475:T:A	rs142817309	T	A	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr13	106609305	106609306	chr13:106609306:C:T	rs35564055	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	106709859	106709860	chr13:106709860:G:A	rs1411736	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr13	106797014	106797015	chr13:106797015:G:A	rs11069666	G	A	a	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	107347738	107347739	chr13:107347739:T:C	rs9559012	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	107712186	107712187	chr13:107712187:C:A	rs8000279	C	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr13	107864996	107864997	chr13:107864997:C:G	rs59223296	C	G	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	108594343	108594344	chr13:108594344:T:C	rs7139430	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr13	108594355	108594356	chr13:108594356:T:C	rs75167687	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr13	108594359	108594360	chr13:108594360:C:T	rs7338021	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.741948279795344	6.357048598033734	ACCAATTAGG
chr13	108594364	108594365	chr13:108594365:T:C	rs76737003	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	3.881851836234596	ACCAATTAGG
chr13	109459698	109459699	chr13:109459699:T:C	rs72662063	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.150894896428305	0.3103376720096457	GGTAATTACC
chr13	110870407	110870408	chr13:110870408:C:T	rs35964739	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	110870408	110870409	chr13:110870409:G:A	rs78404108	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	110908316	110908317	chr13:110908317:C:A	rs77220412	C	A	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	111056391	111056392	chr13:111056392:G:T	rs4773312	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr13	111304666	111304667	chr13:111304667:T:C	rs79738038	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.007267207914503	5.018409306001321	TGTAATTAGC
chr13	111373583	111373584	chr13:111373584:G:A	rs77052260	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	111512620	111512621	chr13:111512621:C:T	rs1571625	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr13	111572993	111572994	chr13:111572994:G:A	rs12184929	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr13	111893074	111893075	chr13:111893075:G:C	rs1345962838	G	C	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr13	111924168	111924169	chr13:111924169:G:A	rs74130223	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr13	111952595	111952596	chr13:111952596:A:G	rs735223	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	112064398	112064399	chr13:112064399:T:C	rs74131154	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr13	112160476	112160477	chr13:112160477:A:G	rs75639327	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr13	112248501	112248502	chr13:112248502:A:C	rs72667520	A	C	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	112256947	112256948	chr13:112256948:A:G	rs9549913	A	G	G	Hoxd3.mouse_homeodomain_1	5	1	-	6.901879681539695	0.061322457121035234	AGCAATTAGG
chr13	112668952	112668953	chr13:112668953:A:G	rs79291001	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr13	112931309	112931310	chr13:112931310:C:T	rs55894601	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr13	112931314	112931315	chr13:112931315:G:A	rs6577019	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr13	112985220	112985221	chr13:112985221:C:T	rs752275687	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	113052100	113052101	chr13:113052101:A:G	rs4907579	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr14	19176753	19176754	chr14:19176754:A:G	rs61971174	A	G	.	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr14	20548445	20548446	chr14:20548446:G:A	rs58899057	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr14	20590162	20590163	chr14:20590163:T:C	rs45440293	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	20590177	20590178	chr14:20590178:C:T	rs4981259	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	21649181	21649182	chr14:21649182:A:G	rs8008166	A	G	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr14	21929166	21929167	chr14:21929167:T:G	rs10144270	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.30929062122411	5.993682884753269	AGTAATTAGT
chr14	21960401	21960402	chr14:21960402:C:T	rs2331474	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	22084640	22084641	chr14:22084641:C:T	rs559475568	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	22084655	22084656	chr14:22084656:C:G	rs1284020318	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	22147510	22147511	chr14:22147511:C:T	rs1012361	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.241240225091396	5.573519458387995	CGCAATTACC
chr14	22401197	22401198	chr14:22401198:T:G	rs3827920	T	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	22419859	22419860	chr14:22419860:G:A	rs12434323	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	+	5.898970685399792	5.957886329571231	GGCCATTAGC
chr14	22599151	22599152	chr14:22599152:A:G	rs140779180	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.503391442821062	7.435275621829636	ACTAATTAAC
chr14	22606209	22606210	chr14:22606210:C:T	rs1242926	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	22641971	22641972	chr14:22641972:T:C	rs10147839	T	C	c	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	22791482	22791483	chr14:22791483:T:C	rs4605074	T	C	C	Hoxd3.mouse_homeodomain_1	6	1	+	7.0639691987030195	4.231018247533318	AGCAATTAGC
chr14	22957335	22957336	chr14:22957336:T:C	rs117593517	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr14	22957342	22957343	chr14:22957343:T:G	rs115335261	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.678572715728777	5.581690023416976	AGCAATTACC
chr14	23539340	23539341	chr14:23539341:T:C	rs3783438	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr14	23544646	23544647	chr14:23544647:C:T	rs114261046	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr14	24945132	24945133	chr14:24945133:T:C	rs4983037	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.741948279795344	-0.09860894462331571	ACCAATTAGG
chr14	24984798	24984799	chr14:24984799:A:G	rs73595321	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr14	25247382	25247383	chr14:25247383:G:A	rs1461545	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	25376177	25376178	chr14:25376178:C:T	rs111773310	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr14	25548122	25548123	chr14:25548123:T:C	rs7157906	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr14	25803661	25803662	chr14:25803662:T:A	rs17278139	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr14	26394671	26394672	chr14:26394672:A:T	rs17495733	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.007267207914503	4.486656844560326	TGTAATTAGC
chr14	27050585	27050586	chr14:27050586:A:G	rs77192485	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	27050613	27050614	chr14:27050614:A:G	rs59318207	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	27051451	27051452	chr14:27051452:T:G	chr14:27051452:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	27271314	27271315	chr14:27271315:T:G	rs202978	T	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	27915977	27915978	chr14:27915978:A:G	rs10136843	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr14	28121910	28121911	chr14:28121911:C:T	rs1191373	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	28417633	28417634	chr14:28417634:T:C	rs12147366	T	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	28902675	28902676	chr14:28902676:T:C	rs2145453	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr14	29009254	29009255	chr14:29009255:A:G	rs78565318	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr14	29737010	29737011	chr14:29737011:A:T	rs4996739	A	T	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	30849458	30849459	chr14:30849459:T:G	rs561162471	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.732748102975356	6.288435975829675	GCCAATTAAG
chr14	31264308	31264309	chr14:31264309:T:G	rs116495789	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.214270460494872	6.117387768183073	GCTAATTAGG
chr14	32318547	32318548	chr14:32318548:A:G	rs7146393	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr14	32333087	32333088	chr14:32333088:A:G	rs7151016	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr14	33309495	33309496	chr14:33309496:A:T	rs77410589	A	T	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	33350638	33350639	chr14:33350639:C:A	rs193035165	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr14	33737078	33737079	chr14:33737079:C:T	rs11845003	C	T	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr14	33849069	33849070	chr14:33849070:G:A	rs60162554	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr14	34122088	34122089	chr14:34122089:C:T	rs8005808	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr14	34137429	34137430	chr14:34137430:A:G	rs797326	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.279477285346397	3.4193808417856495	GCTCATTAGC
chr14	34700498	34700499	chr14:34700499:G:A	rs55979914	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	34982203	34982204	chr14:34982204:T:C	rs799488	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr14	34982216	34982217	chr14:34982217:T:C	rs181139568	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr14	35331907	35331908	chr14:35331908:A:C	rs78764488	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.663322844565413	5.21416737429056	AGTAATTAAC
chr14	35383187	35383188	chr14:35383188:G:A	rs17514338	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr14	35879972	35879973	chr14:35879973:G:A	rs60711243	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr14	36389839	36389840	chr14:36389840:T:C	rs3909618	T	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	36455208	36455209	chr14:36455209:C:G	rs17104536	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr14	37974626	37974627	chr14:37974627:A:G	rs116535563	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	38254069	38254070	chr14:38254070:A:T	rs1952562	A	T	C	Hoxd3.mouse_homeodomain_1	5	1	-	7.44231768323065	3.6656185614135812	AGTAATTAGG
chr14	38548283	38548284	chr14:38548284:T:C	rs7147094	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	39152056	39152057	chr14:39152057:T:G	rs7147194	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.732748102975356	5.417140366504515	GCCAATTAAG
chr14	39494790	39494791	chr14:39494791:A:G	rs72677648	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	39592811	39592812	chr14:39592812:C:A	rs2180390	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	40616147	40616148	chr14:40616148:G:A	rs10132163	G	A	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	41202045	41202046	chr14:41202046:G:A	rs77639584	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.007267207914503	7.066182852085942	TGTAATTAGC
chr14	41375890	41375891	chr14:41375891:T:G	rs8016057	T	G	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.6738324588039175	4.2246769885290645	GCCAATTAGG
chr14	41609440	41609441	chr14:41609441:G:C	rs17112133	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr14	42735471	42735472	chr14:42735472:G:A	rs1954355	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr14	43360168	43360169	chr14:43360169:C:A	rs61998418	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	43479998	43479999	chr14:43479999:C:T	rs56222513	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr14	44031376	44031377	chr14:44031377:C:T	rs62012600	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.595207023573987	7.663322844565413	GGTAATTAAC
chr14	44268876	44268877	chr14:44268877:C:G	rs75216184	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.44231768323065	7.604407200393974	AGTAATTAGG
chr14	44309730	44309731	chr14:44309731:C:T	rs7154554	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	44942637	44942638	chr14:44942638:T:C	rs28695721	T	C	C	Hoxd3.mouse_homeodomain_1	6	1	+	6.904037796958669	4.071086845788967	ACCAATTAGC
chr14	45401606	45401607	chr14:45401607:C:T	rs143359510	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	46054870	46054871	chr14:46054871:G:C	rs935147490	G	C	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	47312007	47312008	chr14:47312008:T:C	rs4488370	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.962953441130107	4.10285699756936	ACCAATTAAC
chr14	47976480	47976481	chr14:47976481:C:G	rs79945386	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	48901799	48901800	chr14:48901800:A:G	rs6572524	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	50136411	50136412	chr14:50136412:A:G	rs4898648	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr14	50270006	50270007	chr14:50270007:C:T	rs2153553	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.678572715728777	6.328799166028848	AGCAATTACC
chr14	50559241	50559242	chr14:50559242:T:A	rs112337473	T	A	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	50784672	50784673	chr14:50784673:T:G	rs11626645	T	G	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	51278149	51278150	chr14:51278150:A:G	rs72622442	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr14	51597368	51597369	chr14:51597369:G:A	rs74054651	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr14	51667005	51667006	chr14:51667006:G:A	rs58134833	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	51990026	51990027	chr14:51990027:T:G	rs114902512	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.374201862239223	6.058594125768382	GGTAATTAGG
chr14	51990045	51990046	chr14:51990046:C:T	chr14:51990046:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr14	52950146	52950147	chr14:52950147:C:A	rs115261931	C	A	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	53193169	53193170	chr14:53193170:T:C	rs2006697	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.732748102975356	4.7438902010621735	GCCAATTAAG
chr14	53213836	53213837	chr14:53213837:G:A	rs35105225	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	53523849	53523850	chr14:53523850:A:G	rs2251294	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr14	54132246	54132247	chr14:54132247:T:G	rs11622022	T	G	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	54232920	54232921	chr14:54232921:A:G	rs55635942	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	54232947	54232948	chr14:54232948:A:G	rs1187432	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	54315112	54315113	chr14:54315113:C:T	rs17714153	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	54315148	54315149	chr14:54315149:G:C	rs12436155	G	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr14	54337444	54337445	chr14:54337445:C:T	rs11625167	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.595207023573987	7.663322844565413	GGTAATTAAC
chr14	54564831	54564832	chr14:54564832:T:A	rs74053854	T	A	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	54609758	54609759	chr14:54609759:A:G	rs11158018	A	G	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	54699373	54699374	chr14:54699374:G:C	rs80331232	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr14	54728485	54728486	chr14:54728486:C:G	rs17127816	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	55330163	55330164	chr14:55330164:A:C	rs541219837	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	55412966	55412967	chr14:55412967:A:G	rs10138446	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	55450818	55450819	chr14:55450819:G:C	rs17128488	G	C	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	55451410	55451411	chr14:55451411:C:T	rs17128493	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr14	55587635	55587636	chr14:55587636:T:C	rs10147380	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr14	55771429	55771430	chr14:55771430:A:G	rs1104962	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	56552873	56552874	chr14:56552874:T:A	rs73275318	T	A	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	56958981	56958982	chr14:56958982:G:C	rs4901744	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr14	56997096	56997097	chr14:56997097:A:G	rs67212880	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	57090103	57090104	chr14:57090104:C:T	rs11850777	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	57090117	57090118	chr14:57090118:C:T	rs12890995	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.2190107174197315	6.923894138249867	AGTAATTACC
chr14	57559746	57559747	chr14:57559747:A:G	rs17093322	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	57821096	57821097	chr14:57821097:T:C	rs8020751	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	57998267	57998268	chr14:57998268:G:C	rs2747100	G	C	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	58897421	58897422	chr14:58897422:G:C	rs413692	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.277319169927424	6.439408687090748	GGTCATTAGG
chr14	58905030	58905031	chr14:58905031:A:C	rs430605	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr14	58905045	58905046	chr14:58905046:C:T	rs185232342	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr14	59094836	59094837	chr14:59094837:G:A	rs3759703	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	59584900	59584901	chr14:59584901:G:C	rs4144153	G	C	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr14	59869202	59869203	chr14:59869203:C:T	rs12436320	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	60091440	60091441	chr14:60091441:C:T	rs1054379564	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr14	61104603	61104604	chr14:61104604:C:T	rs571746660	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	61104643	61104644	chr14:61104644:A:G	rs896354304	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	61187403	61187404	chr14:61187404:G:A	rs117345793	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr14	61196382	61196383	chr14:61196383:C:G	rs58960187	C	G	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr14	61321058	61321059	chr14:61321059:A:C	chr14:61321059:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	61366657	61366658	chr14:61366658:A:T	rs4899039	A	T	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	61485478	61485479	chr14:61485479:C:T	rs115387259	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	61490124	61490125	chr14:61490125:A:G	rs4902065	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	61490125	61490126	chr14:61490126:C:T	rs4902066	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	61747129	61747130	chr14:61747130:T:C	rs2057482	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.220683642931706	3.3605871993709595	GGTAATGAGC
chr14	61972794	61972795	chr14:61972795:C:G	rs2784507	C	G	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr14	62482048	62482049	chr14:62482049:G:A	rs118187828	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	63800180	63800181	chr14:63800181:G:A	rs8005553	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.700736798541729	6.768852619533155	GGCAATTAGT
chr14	64569308	64569309	chr14:64569309:T:C	rs549675102	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	64755931	64755932	chr14:64755932:G:C	rs117330152	G	C	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	64755933	64755934	chr14:64755934:T:C	rs60585534	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr14	64983723	64983724	chr14:64983724:C:T	rs7159356	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	65239967	65239968	chr14:65239968:C:G	rs57391747	C	G	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr14	65291517	65291518	chr14:65291518:G:A	rs76824828	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr14	65566135	65566136	chr14:65566136:A:G	rs10143920	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	65994168	65994169	chr14:65994169:G:T	rs1036979	G	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	6.894837620138681	6.3478484212137465	GCCAATTAAC
chr14	66076056	66076057	chr14:66076057:G:A	rs112777087	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	66254226	66254227	chr14:66254227:T:C	rs10149419	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	67357852	67357853	chr14:67357853:C:T	rs185803015	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr14	67633958	67633959	chr14:67633959:T:C	rs12436474	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	68011421	68011422	chr14:68011422:A:G	rs6573805	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	68018385	68018386	chr14:68018386:T:C	rs10129355	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr14	68332384	68332385	chr14:68332385:A:T	rs2180769	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.300090444404122	4.779480081049945	GGTAATTAAT
chr14	68507692	68507693	chr14:68507693:A:G	rs739874	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr14	68563785	68563786	chr14:68563786:G:A	rs17105847	G	A	g	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	68624584	68624585	chr14:68624585:C:T	rs75562814	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.61045689473735	7.150894896428305	GGCAATTACC
chr14	68819388	68819389	chr14:68819389:G:A	rs114599135	G	A	g	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	69056505	69056506	chr14:69056506:C:G	rs10498526	C	G	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	69060306	69060307	chr14:69060307:A:G	rs75183997	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	69087517	69087518	chr14:69087518:T:C	rs116735454	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	69654555	69654556	chr14:69654556:A:G	rs79365473	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr14	70057809	70057810	chr14:70057810:T:C	rs10138444	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.44231768323065	0.60176045881199	AGTAATTAGG
chr14	70177579	70177580	chr14:70177580:G:A	rs12884224	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	70177580	70177581	chr14:70177581:C:A	rs12883951	C	A	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	71183973	71183974	chr14:71183974:G:A	rs74641260	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr14	71183988	71183989	chr14:71183989:C:T	rs74062122	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr14	72503191	72503192	chr14:72503192:G:A	rs11844952	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr14	72735665	72735666	chr14:72735666:G:A	rs11851733	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	72823257	72823258	chr14:72823258:C:T	rs75309952	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	73784099	73784100	chr14:73784100:A:G	rs78078433	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	74111706	74111707	chr14:74111707:C:T	rs4365232	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr14	74218072	74218073	chr14:74218073:T:C	rs72728145	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	75316554	75316555	chr14:75316555:T:C	rs17103133	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	75474374	75474375	chr14:75474375:G:A	rs56303843	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.892679504719707	6.224958738016306	GGCAATTAAG
chr14	75474389	75474390	chr14:75474390:T:A	rs192799431	T	A	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr14	75475254	75475255	chr14:75475255:C:T	rs74065211	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr14	75636321	75636322	chr14:75636322:G:C	rs76997170	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	75636327	75636328	chr14:75636328:C:G	rs117725470	C	G	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr14	76125121	76125122	chr14:76125122:G:C	rs28433751	G	C	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr14	76138756	76138757	chr14:76138757:G:C	rs867141037	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	76314567	76314568	chr14:76314568:T:G	rs79656545	T	G	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr14	76900876	76900877	chr14:76900877:C:T	rs149702094	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	76985643	76985644	chr14:76985644:A:G	rs28649218	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	77096957	77096958	chr14:77096958:T:G	rs28498055	T	G	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr14	77146108	77146109	chr14:77146109:A:G	rs10140076	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	77469596	77469597	chr14:77469597:A:C	rs17751406	A	C	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.433117506410662	6.9888053792649805	GGTAATTAAG
chr14	77615719	77615720	chr14:77615720:A:G	rs933413589	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.503391442821062	0.6628342184024029	ACTAATTAAC
chr14	78173373	78173374	chr14:78173374:C:G	rs213562	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr14	78239272	78239273	chr14:78239273:G:A	rs34691573	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	78413706	78413707	chr14:78413707:G:A	rs35007217	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.167074709756593	6.499353943053193	CGTAATTAGC
chr14	79575205	79575206	chr14:79575206:T:C	rs145214672	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr14	79585902	79585903	chr14:79585903:C:G	rs17109514	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.300090444404122	7.140159042659771	GGTAATTAAT
chr14	79614695	79614696	chr14:79614696:C:A	rs79916960	C	A	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	80571152	80571153	chr14:80571153:A:G	rs8011532	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	80954517	80954518	chr14:80954518:G:A	rs111513088	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr14	81385646	81385647	chr14:81385647:T:C	rs77614941	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.279477285346397	-0.5610799390722622	GCTCATTAGC
chr14	81536731	81536732	chr14:81536732:G:A	rs12185025	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.122884842874458	6.455164076171057	AGCAATTAAC
chr14	81971829	81971830	chr14:81971830:T:C	rs1198036	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr14	82182955	82182956	chr14:82182956:C:T	rs78663823	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	82912189	82912190	chr14:82912190:T:C	rs28538809	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr14	83017718	83017719	chr14:83017719:T:A	rs58739480	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	83072246	83072247	chr14:83072247:G:T	rs10143693	G	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	83719442	83719443	chr14:83719443:C:T	rs10141403	C	T	-	Hoxd3.mouse_homeodomain_1	2	1	+	6.241240225091396	6.7816782267823505	CGCAATTACC
chr14	83975603	83975604	chr14:83975604:C:T	rs17119336	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	85124486	85124487	chr14:85124487:G:A	rs8016492	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	85157434	85157435	chr14:85157435:G:A	rs55947233	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr14	85357181	85357182	chr14:85357182:T:C	rs10144610	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr14	85362844	85362845	chr14:85362845:T:C	rs11848194	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	86184663	86184664	chr14:86184664:A:G	rs7158858	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	86429372	86429373	chr14:86429373:G:A	rs76941855	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	+	6.464547190902314	5.796826424198914	CGCAATTAGG
chr14	86557786	86557787	chr14:86557787:T:C	rs12886761	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.4444757986496235	4.584379355088877	ACTAATTAGC
chr14	86675214	86675215	chr14:86675215:G:A	rs12588769	G	A	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr14	87734576	87734577	chr14:87734577:C:A	rs77216969	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr14	88005432	88005433	chr14:88005433:T:G	rs10139526	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.282386281486299	5.966778545015457	ACTAATTAGG
chr14	88821783	88821784	chr14:88821784:T:C	rs189539421	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr14	89059649	89059650	chr14:89059650:G:T	rs11159882	G	T	T	Hoxd3.mouse_homeodomain_1	1	1	+	6.989302180477614	6.305231357163452	GGTAATTAGA
chr14	89088367	89088368	chr14:89088368:A:C	chr14:89088368:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	89270844	89270845	chr14:89270845:T:A	rs28416219	T	A	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr14	89805607	89805608	chr14:89805608:C:G	rs12893102	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.595207023573987	7.225990353928032	GGTAATTAAC
chr14	90398089	90398090	chr14:90398090:G:T	rs537370236	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr14	90624774	90624775	chr14:90624775:T:G	rs74081245	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr14	90630498	90630499	chr14:90630499:T:C	rs11623679	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr14	91117924	91117925	chr14:91117925:G:A	rs10143542	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr14	91202236	91202237	chr14:91202237:G:T	rs117679538	G	T	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	91253332	91253333	chr14:91253333:G:T	rs190731577	G	T	g	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	91272351	91272352	chr14:91272352:T:G	rs12878426	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.741948279795344	2.901449103243276	ACCAATTAGG
chr14	91310885	91310886	chr14:91310886:C:G	rs78186318	C	G	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr14	91310910	91310911	chr14:91310911:T:C	rs116183287	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.220683642931706	4.2318257410185245	GGTAATGAGC
chr14	91397544	91397545	chr14:91397545:T:A	rs960476150	T	A	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.007267207914503	4.486656844560326	TGTAATTAGC
chr14	91419199	91419200	chr14:91419200:A:G	rs191947216	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.960795325711134	0.12023810129247414	AGCAATTAAG
chr14	91419218	91419219	chr14:91419219:C:G	rs532055853	C	G	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	91448731	91448732	chr14:91448732:C:T	rs4633646	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr14	91567964	91567965	chr14:91567965:T:C	rs4900081	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr14	91575763	91575764	chr14:91575764:G:A	rs11160016	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr14	91654457	91654458	chr14:91654458:G:A	rs1743108	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr14	91858849	91858850	chr14:91858850:C:T	rs17127634	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	92460953	92460954	chr14:92460954:T:C	rs4904918	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	92484855	92484856	chr14:92484856:A:C	rs12432742	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr14	92517924	92517925	chr14:92517925:C:T	rs181297823	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	92800234	92800235	chr14:92800235:A:C	rs11847677	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.960795325711134	3.1202961491590657	AGCAATTAAG
chr14	92863927	92863928	chr14:92863928:A:G	rs73341019	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	92890443	92890444	chr14:92890444:C:A	rs56137244	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	93009119	93009120	chr14:93009120:C:T	rs76030571	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr14	93146578	93146579	chr14:93146579:A:G	rs61991714	A	G	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	93146604	93146605	chr14:93146605:T:G	rs11628720	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.2190107174197315	5.90340298094889	AGTAATTACC
chr14	93146609	93146610	chr14:93146610:A:G	rs11624055	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr14	93902757	93902758	chr14:93902758:T:C	rs4905111	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.835921975967242	4.847064074054059	GCCAATTAGC
chr14	93941532	93941533	chr14:93941533:C:T	rs73337612	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.995853377711593	7.054769021883032	GGCAATTAGC
chr14	94138431	94138432	chr14:94138432:C:G	rs766026416	C	G	.	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr14	94171538	94171539	chr14:94171539:T:A	rs75404723	T	A	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	94175529	94175530	chr14:94175530:G:T	rs1956455	G	T	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	94585739	94585740	chr14:94585740:A:G	rs2747116	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr14	94585743	94585744	chr14:94585744:T:C	rs2747117	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr14	94880021	94880022	chr14:94880022:C:T	rs732964	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.700736798541729	6.7596524427131675	GGCAATTAGT
chr14	94891004	94891005	chr14:94891005:A:G	rs2994688	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	94893523	94893524	chr14:94893524:G:A	rs60935848	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr14	94921352	94921353	chr14:94921353:T:C	rs11627154	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	95045850	95045851	chr14:95045851:G:A	rs12434061	G	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	95204960	95204961	chr14:95204961:T:C	rs1187616	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	95238827	95238828	chr14:95238828:C:T	rs58674922	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	95461189	95461190	chr14:95461190:G:A	rs115996104	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr14	95513117	95513118	chr14:95513118:G:A	rs179153	G	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	95715022	95715023	chr14:95715023:A:T	rs1957937	A	T	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr14	95885325	95885326	chr14:95885326:A:G	rs140819292	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr14	95994484	95994485	chr14:95994485:T:G	rs145747756	T	G	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr14	95994489	95994490	chr14:95994490:C:T	rs145616338	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr14	96100644	96100645	chr14:96100645:T:G	rs141502015	T	G	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	96100673	96100674	chr14:96100674:G:A	rs12897115	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.448367377574026	6.063467695812416	GGCAATTACG
chr14	96502265	96502266	chr14:96502266:G:C	rs758821658	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr14	96502266	96502267	chr14:96502267:G:T	rs7160148	G	T	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr14	97832588	97832589	chr14:97832589:T:C	rs59494684	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	98164117	98164118	chr14:98164118:G:A	rs10151901	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr14	98301510	98301511	chr14:98301511:A:C	rs61978703	A	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	98788374	98788375	chr14:98788375:A:C	rs1159799	A	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	99542024	99542025	chr14:99542025:G:A	rs143776361	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	99774961	99774962	chr14:99774962:G:A	rs61190577	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.4444757986496235	7.503391442821062	ACTAATTAGC
chr14	99780196	99780197	chr14:99780197:T:C	rs12431804	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	100220064	100220065	chr14:100220065:A:G	rs3117663	A	G	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	100362698	100362699	chr14:100362699:T:C	rs1156898263	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.450525492992999	3.5904290494322515	GCCAATTACC
chr14	100712377	100712378	chr14:100712378:C:G	rs72698720	C	G	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr14	100765729	100765730	chr14:100765730:T:C	rs56227773	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr14	100823675	100823676	chr14:100823676:T:C	rs144201752	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	101038902	101038903	chr14:101038903:A:G	rs11621499	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.277319169927424	3.4172227263666755	GGTCATTAGG
chr14	101331900	101331901	chr14:101331901:G:A	rs7150146	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	101875480	101875481	chr14:101875481:A:T	rs77049780	A	T	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.300090444404122	5.1723365516887165	GGTAATTAAT
chr14	102049108	102049109	chr14:102049109:A:C	rs10135797	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.8337638605482685	5.518156124077427	GGCAATTAGG
chr14	102051866	102051867	chr14:102051867:T:C	rs1034206300	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	102085611	102085612	chr14:102085612:C:A	rs34596136	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	102085612	102085613	chr14:102085613:A:C	rs34147314	A	C	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	102253282	102253283	chr14:102253283:A:G	rs3783372	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	102295552	102295553	chr14:102295553:T:C	rs10140958	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	102579988	102579989	chr14:102579989:T:C	rs13329052	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr14	102580021	102580022	chr14:102580022:C:T	rs116186895	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	102580022	102580023	chr14:102580023:G:A	rs940062510	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	102907096	102907097	chr14:102907097:C:G	rs72704737	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	103187421	103187422	chr14:103187422:G:A	rs190981870	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr14	103188451	103188452	chr14:103188452:A:G	rs10135919	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr14	103504182	103504183	chr14:103504183:C:T	rs574638539	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	103633471	103633472	chr14:103633472:G:A	rs75986142	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	103817264	103817265	chr14:103817265:G:T	rs185550975	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	103963704	103963705	chr14:103963705:C:T	rs28505294	C	T	c	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	104159183	104159184	chr14:104159184:C:T	rs118061047	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr14	104202545	104202546	chr14:104202546:G:T	rs71419805	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr14	105420949	105420950	chr14:105420950:C:T	rs149389111	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	105861217	105861218	chr14:105861218:G:C	rs148092712	G	C	.	Hoxd3.mouse_homeodomain_1	1	1	+	6.960795325711134	6.800863923966783	AGCAATTAAG
chr14	105861228	105861229	chr14:105861229:C:T	rs141869214	C	T	.	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr14	105861240	105861241	chr14:105861241:T:C	rs181472970	T	C	.	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr14	105882618	105882619	chr14:105882619:C:A	rs2516980	C	A	.	Hoxd3.mouse_homeodomain_1	1	1	+	6.6738324588039175	6.166043093844867	GCCAATTAGG
chr14	105892757	105892758	chr14:105892758:G:T	rs2516966	G	T	.	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	106039597	106039598	chr14:106039598:A:G	rs4774051	A	G	.	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	106436634	106436635	chr14:106436635:G:A	rs10130322	G	A	N	Hoxd3.mouse_homeodomain_1	0	1	+	7.300090444404122	7.368206265395549	GGTAATTAAT
chr15	22789390	22789391	chr15:22789391:C:A	rs117946938	C	A	c	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	22860319	22860320	chr15:22860320:T:C	rs12439822	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr15	23568107	23568108	chr15:23568108:A:T	rs562549667	A	T	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.604407200393974	5.4766533076785695	AGTAATTAGC
chr15	24662465	24662466	chr15:24662466:T:C	rs7181915	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.700736798541729	4.711878896628546	GGCAATTAGT
chr15	25982201	25982202	chr15:25982202:A:T	rs34487669	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	26891419	26891420	chr15:26891420:A:G	rs145342878	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr15	27401281	27401282	chr15:27401282:T:A	rs7166711	T	A	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr15	27743003	27743004	chr15:27743004:T:C	rs2871771	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	28886179	28886180	chr15:28886180:G:T	rs1032067073	G	T	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr15	28921830	28921831	chr15:28921831:C:G	rs56334555	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	28921842	28921843	chr15:28921843:T:G	rs56794407	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	28968768	28968769	chr15:28968769:C:T	rs73368749	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr15	29035294	29035295	chr15:29035295:A:G	rs551816695	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr15	29309330	29309331	chr15:29309331:G:A	rs7179369	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	29309332	29309333	chr15:29309333:G:A	rs34914975	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.241174800232684	7.30929062122411	GGTAATTAGT
chr15	29360206	29360207	chr15:29360207:C:T	rs35204596	C	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr15	29360223	29360224	chr15:29360224:G:A	rs28576393	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.61045689473735	6.315340315567486	GGCAATTACC
chr15	29531972	29531973	chr15:29531973:C:T	rs1455821237	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	29916450	29916451	chr15:29916451:T:C	rs1719336	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr15	30065246	30065247	chr15:30065247:G:A	rs34384012	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.960795325711134	6.293074559007732	AGCAATTAAG
chr15	31385228	31385229	chr15:31385229:A:G	rs150598203	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	31390722	31390723	chr15:31390723:T:A	rs34682798	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	31869402	31869403	chr15:31869403:C:T	rs34315282	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	7.501233327402089	AGCAATTAAG
chr15	31974628	31974629	chr15:31974629:C:G	rs11071452	C	G	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	32838967	32838968	chr15:32838968:G:C	rs868303561	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr15	32918599	32918600	chr15:32918600:G:A	rs10152541	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.523462835073753	5.855742068370352	CGCAATTAAG
chr15	32944351	32944352	chr15:32944352:G:C	rs7170098	G	C	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr15	33206478	33206479	chr15:33206479:C:T	rs67585854	C	T	c	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	33314427	33314428	chr15:33314428:C:T	rs1050491545	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr15	33551975	33551976	chr15:33551976:C:T	rs1529845	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr15	33730922	33730923	chr15:33730923:G:T	rs1874276	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	34583609	34583610	chr15:34583610:G:T	rs2655326	G	T	g	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	34621930	34621931	chr15:34621931:T:C	rs74921031	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr15	34768758	34768759	chr15:34768759:C:G	rs1865922	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr15	34813455	34813456	chr15:34813456:A:C	rs11852984	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	34986523	34986524	chr15:34986524:T:G	rs7176128	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr15	35256607	35256608	chr15:35256608:G:A	rs2622758	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr15	35932834	35932835	chr15:35932835:A:G	rs1858244	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr15	36275837	36275838	chr15:36275838:T:C	rs17642282	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	36519968	36519969	chr15:36519969:A:G	rs12905529	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	37112726	37112727	chr15:37112727:A:G	rs7167841	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	37147248	37147249	chr15:37147249:C:T	rs8027377	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	38389430	38389431	chr15:38389431:T:C	rs12900050	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr15	38746030	38746031	chr15:38746031:T:C	rs2002127	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr15	39158002	39158003	chr15:39158003:A:G	rs16968273	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr15	39255324	39255325	chr15:39255325:A:C	rs60456859	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	39325093	39325094	chr15:39325094:T:C	rs56003663	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	39360616	39360617	chr15:39360617:T:C	rs79347560	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	39587107	39587108	chr15:39587108:G:A	rs1904209	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr15	39626035	39626036	chr15:39626036:G:A	rs28377784	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	39626049	39626050	chr15:39626050:G:A	rs28619289	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	39837002	39837003	chr15:39837003:A:C	rs10520154	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr15	39963868	39963869	chr15:39963869:A:T	rs17721122	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	40003757	40003758	chr15:40003758:C:T	rs2412459	C	T	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	40052172	40052173	chr15:40052173:G:A	rs1449077704	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr15	40382718	40382719	chr15:40382719:T:C	rs17733008	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.279477285346397	5.739039283655441	GCTCATTAGC
chr15	40500105	40500106	chr15:40500106:C:T	rs189662866	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr15	41564425	41564426	chr15:41564426:G:T	rs925960371	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	42059915	42059916	chr15:42059916:A:G	rs1035457850	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr15	42059954	42059955	chr15:42059955:G:A	rs8042219	G	A	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	42594457	42594458	chr15:42594458:C:T	rs17767264	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr15	43092489	43092490	chr15:43092490:A:G	rs116707652	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	43372053	43372054	chr15:43372054:C:T	rs75628701	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	43809121	43809122	chr15:43809122:T:C	rs115362284	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr15	43828360	43828361	chr15:43828361:T:G	rs678084	T	G	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr15	44784015	44784016	chr15:44784016:T:C	rs1669833	T	C	N	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	44853641	44853642	chr15:44853642:G:T	rs2948906	G	T	N	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr15	45037121	45037122	chr15:45037122:A:G	rs111896706	A	G	a	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	45112674	45112675	chr15:45112675:A:C	rs185014205	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr15	45112695	45112696	chr15:45112696:T:G	chr15:45112696:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	45242293	45242294	chr15:45242294:A:C	rs11634794	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr15	46646210	46646211	chr15:46646211:T:C	rs518935	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	5.898970685399792	3.0388742418390455	GGCCATTAGC
chr15	46710870	46710871	chr15:46710871:C:A	rs4338736	C	A	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	47643261	47643262	chr15:47643262:C:T	rs1224673	C	T	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	47716772	47716773	chr15:47716773:G:C	rs1439319	G	C	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.439408687090748	6.279477285346397	GGTCATTAGC
chr15	47796165	47796166	chr15:47796166:C:T	rs80164756	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr15	48391037	48391038	chr15:48391038:G:A	rs8025596	G	A	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	49708074	49708075	chr15:49708075:C:T	rs7180421	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr15	49832688	49832689	chr15:49832689:G:A	rs11070724	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.663322844565413	7.368206265395549	AGTAATTAAC
chr15	49844585	49844586	chr15:49844586:T:A	rs7180532	T	A	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	50145617	50145618	chr15:50145618:T:C	rs12443171	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	50145648	50145649	chr15:50145649:C:T	rs28550188	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr15	51012187	51012188	chr15:51012188:T:C	chr15:51012188:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr15	51144963	51144964	chr15:51144964:G:A	rs60281978	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.273186104666311	6.888286422904701	GCTAATTAAG
chr15	51307485	51307486	chr15:51307486:A:G	rs10519302	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	7.341301925657738	3.1847425243211274	ACTAATTAAG
chr15	51307489	51307490	chr15:51307490:G:A	rs28757102	G	A	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr15	51600307	51600308	chr15:51600308:C:T	rs138690049	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr15	51624635	51624636	chr15:51624636:T:C	rs2124879	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	51793806	51793807	chr15:51793807:G:A	rs117864345	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.901879681539695	7.44231768323065	AGCAATTAGG
chr15	52042103	52042104	chr15:52042104:G:A	rs17612255	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	52069607	52069608	chr15:52069608:T:A	rs4775999	T	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr15	52780536	52780537	chr15:52780537:C:T	rs79402245	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr15	52782916	52782917	chr15:52782917:C:G	rs58758132	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr15	53222999	53223000	chr15:53223000:G:A	rs1911687	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	53331587	53331588	chr15:53331588:A:C	rs74431058	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	53716836	53716837	chr15:53716837:G:A	rs35027152	G	A	g	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr15	53983655	53983656	chr15:53983656:G:A	rs2616911	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.516483198565452	6.166709648865523	AGCAATTACG
chr15	53986276	53986277	chr15:53986277:G:A	rs17793769	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr15	54128823	54128824	chr15:54128824:T:A	rs76923486	T	A	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr15	55255194	55255195	chr15:55255195:A:G	chr15:55255195:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.663322844565413	7.595207023573987	AGTAATTAAC
chr15	55372890	55372891	chr15:55372891:T:C	rs8041885	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	55799507	55799508	chr15:55799508:C:T	rs2014213	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	55799542	55799543	chr15:55799543:T:C	rs12148407	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr15	55870964	55870965	chr15:55870965:C:T	rs66857236	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.678572715728777	6.328799166028848	AGCAATTACC
chr15	55902069	55902070	chr15:55902070:C:T	rs55963708	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr15	55952563	55952564	chr15:55952564:T:A	rs72734329	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr15	55952571	55952572	chr15:55952572:A:G	rs35086304	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr15	56352254	56352255	chr15:56352255:C:T	rs2718914	C	T	-	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	57287317	57287318	chr15:57287318:A:G	rs12438324	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	57311022	57311023	chr15:57311023:G:T	rs2440943	G	T	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	57353549	57353550	chr15:57353550:C:T	rs72736091	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	57353561	57353562	chr15:57353562:G:T	rs561265108	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	57370829	57370830	chr15:57370830:G:A	rs1664478	G	A	g	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr15	57421034	57421035	chr15:57421035:T:A	rs11071316	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.374201862239223	4.553615468453949	GGTAATTAGG
chr15	57500548	57500549	chr15:57500549:C:G	chr15:57500549:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr15	57509402	57509403	chr15:57509403:A:G	rs11071326	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	57522218	57522219	chr15:57522219:C:T	rs75812735	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr15	57532717	57532718	chr15:57532718:A:G	rs1690337	A	G	a	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr15	57731736	57731737	chr15:57731737:C:T	rs72745602	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	57782941	57782942	chr15:57782942:C:T	rs76437214	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr15	57883079	57883080	chr15:57883080:T:C	rs873393	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.518641313984426	2.362081912647816	ACCAATTACC
chr15	58261114	58261115	chr15:58261115:G:T	rs1296473448	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	58332196	58332197	chr15:58332197:T:C	rs11637094	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr15	58440238	58440239	chr15:58440239:G:A	rs746141797	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr15	58462895	58462896	chr15:58462896:T:C	rs766050360	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	58526024	58526025	chr15:58526025:T:A	rs73424691	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.279477285346397	3.458890891561123	GCTCATTAGC
chr15	58755926	58755927	chr15:58755927:G:A	rs150472081	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.167074709756593	7.225990353928032	CGTAATTAGC
chr15	59296549	59296550	chr15:59296550:T:C	rs73426914	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr15	59296567	59296568	chr15:59296568:C:T	rs28454018	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	60218848	60218849	chr15:60218849:C:G	rs1681516	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr15	60301189	60301190	chr15:60301190:T:C	rs113038929	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	60821097	60821098	chr15:60821098:C:T	rs341374	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr15	60902034	60902035	chr15:60902035:A:G	rs2899663	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr15	60969877	60969878	chr15:60969878:C:G	rs1523528	C	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	60973850	60973851	chr15:60973851:A:G	rs115236481	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.6738324588039175	4.684974556890735	GCCAATTAGG
chr15	61059049	61059050	chr15:61059050:G:A	rs7173460	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	61155757	61155758	chr15:61155758:T:C	rs142237644	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	61442522	61442523	chr15:61442523:G:T	rs12592713	G	T	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	61442551	61442552	chr15:61442552:C:T	rs35391470	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr15	61748959	61748960	chr15:61748960:G:A	rs17237964	G	A	G	Hoxd3.mouse_homeodomain_1	3	1	-	6.279477285346397	5.286862645827619	GCTCATTAGC
chr15	61830785	61830786	chr15:61830786:C:T	rs78418780	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr15	62087771	62087772	chr15:62087772:A:G	rs7177711	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr15	62295423	62295424	chr15:62295424:C:T	rs62004705	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	62295450	62295451	chr15:62295451:G:C	rs11856956	G	C	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr15	62758410	62758411	chr15:62758411:C:T	chr15:62758411:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr15	63052394	63052395	chr15:63052395:T:G	rs114835967	T	G	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr15	63925645	63925646	chr15:63925646:G:C	rs11853632	G	C	G	Hoxd3.mouse_homeodomain_1	6	1	+	6.220683642931706	4.703340428232846	GGTAATGAGC
chr15	64073140	64073141	chr15:64073141:C:T	rs4622459	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr15	64093651	64093652	chr15:64093652:T:C	rs332259	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	64094446	64094447	chr15:64094447:G:A	rs142903806	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	64383222	64383223	chr15:64383223:T:G	rs56239505	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	65043054	65043055	chr15:65043055:C:A	rs140141719	C	A	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr15	65083472	65083473	chr15:65083473:T:G	rs16948502	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr15	65396928	65396929	chr15:65396929:T:C	rs12442757	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	65940571	65940572	chr15:65940572:G:A	rs10400879	G	A	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.741948279795344	7.282386281486299	ACCAATTAGG
chr15	65940575	65940576	chr15:65940576:C:T	rs74658348	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	66151664	66151665	chr15:66151665:C:G	rs7162499	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	66169540	66169541	chr15:66169541:C:T	rs4776756	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr15	66189167	66189168	chr15:66189168:C:T	rs8034534	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.374201862239223	7.44231768323065	GGTAATTAGG
chr15	66189172	66189173	chr15:66189173:C:A	rs12148773	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	66222079	66222080	chr15:66222080:C:T	rs7183784	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.2190107174197315	6.551289950716331	AGTAATTACC
chr15	66452798	66452799	chr15:66452799:T:C	rs11630608	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	66592610	66592611	chr15:66592611:C:T	rs10152484	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	7.501233327402089	AGCAATTAAG
chr15	66592636	66592637	chr15:66592637:T:C	rs4776304	T	C	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr15	66775798	66775799	chr15:66775799:G:A	rs150532644	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr15	66927492	66927493	chr15:66927493:T:C	rs76276159	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	66930093	66930094	chr15:66930094:A:G	rs266367	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.282386281486299	3.1258268801496887	ACTAATTAGG
chr15	67078167	67078168	chr15:67078168:C:G	rs12901372	C	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	67241205	67241206	chr15:67241206:T:C	rs1992216	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	67527310	67527311	chr15:67527311:A:T	rs10518729	A	T	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr15	67720740	67720741	chr15:67720741:A:G	rs17243334	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr15	67737231	67737232	chr15:67737232:A:G	rs12592101	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	67750718	67750719	chr15:67750719:C:G	rs8028313	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	67794880	67794881	chr15:67794881:C:T	rs12050871	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	68399357	68399358	chr15:68399358:T:G	rs12591421	T	G	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	68423160	68423161	chr15:68423161:G:T	rs7165618	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr15	68524669	68524670	chr15:68524670:C:T	rs895127	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	69801598	69801599	chr15:69801599:T:G	rs111233380	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	69917807	69917808	chr15:69917808:G:C	rs896665	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.835921975967242	6.6738324588039175	GCCAATTAGC
chr15	69953253	69953254	chr15:69953254:A:T	rs61999900	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.8337638605482685	4.744266528717691	GGCAATTAGG
chr15	70017712	70017713	chr15:70017713:G:A	rs11072130	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr15	70048171	70048172	chr15:70048172:G:A	rs3743309	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	70054520	70054521	chr15:70054521:A:G	rs367591884	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	5.898970685399792	3.0660197342300917	GGCCATTAGC
chr15	70199635	70199636	chr15:70199636:G:A	rs10518880	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.61045689473735	5.942736128033949	GGCAATTACC
chr15	70279390	70279391	chr15:70279391:C:T	rs62003090	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr15	70310954	70310955	chr15:70310955:T:C	rs28661009	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr15	70502806	70502807	chr15:70502807:C:T	rs60893338	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	5.898970685399792	5.231249918696392	GGCCATTAGC
chr15	70527218	70527219	chr15:70527219:A:G	chr15:70527219:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.30929062122411	4.4491941776633634	AGTAATTAGT
chr15	70539474	70539475	chr15:70539475:T:C	rs6494876	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	70595022	70595023	chr15:70595023:G:A	rs7180100	G	A	g	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	71251284	71251285	chr15:71251285:C:T	rs112186973	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.516483198565452	6.166709648865523	AGCAATTACG
chr15	71893944	71893945	chr15:71893945:A:T	rs2128112	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	72197350	72197351	chr15:72197351:C:T	rs1457030	C	T	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr15	72778940	72778941	chr15:72778941:G:A	rs12594938	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr15	73358482	73358483	chr15:73358483:G:A	rs3826046	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	73391686	73391687	chr15:73391687:G:A	rs77740482	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr15	73951555	73951556	chr15:73951556:G:A	rs12441138	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr15	74241286	74241287	chr15:74241287:C:T	rs62003670	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr15	74442477	74442478	chr15:74442478:C:T	rs750607	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	74779488	74779489	chr15:74779489:C:G	rs78957305	C	G	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr15	74997380	74997381	chr15:74997381:T:C	rs3812945	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	75061633	75061634	chr15:75061634:A:C	rs8033837	A	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr15	75079094	75079095	chr15:75079095:C:T	rs6495148	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	76064959	76064960	chr15:76064960:A:G	rs146693794	A	G	a	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	77327201	77327202	chr15:77327202:T:C	rs17469450	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	77667683	77667684	chr15:77667684:T:C	rs73457843	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr15	77763215	77763216	chr15:77763216:T:A	rs56013767	T	A	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr15	77772881	77772882	chr15:77772882:G:A	rs12592419	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.376359977658197	7.4444757986496235	GCTAATTAGC
chr15	78155681	78155682	chr15:78155682:T:C	rs3825848	T	C	.	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	78236195	78236196	chr15:78236196:C:T	rs12708524	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr15	78236218	78236219	chr15:78236219:A:C	rs11637289	A	C	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	79190273	79190274	chr15:79190274:G:T	rs56940746	G	T	g	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	79340112	79340113	chr15:79340113:A:G	rs137950970	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	79340142	79340143	chr15:79340143:A:C	rs12913684	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr15	79895818	79895819	chr15:79895819:T:C	rs115322458	T	C	.	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr15	80388356	80388357	chr15:80388357:C:T	rs12900693	C	T	c	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	80710514	80710515	chr15:80710515:G:T	rs57783949	G	T	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr15	81011704	81011705	chr15:81011705:G:A	rs11852470	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr15	82063164	82063165	chr15:82063165:G:T	rs556005616	G	T	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr15	82595962	82595963	chr15:82595963:G:C	rs28415133	G	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr15	82702845	82702846	chr15:82702846:T:C	rs4779053	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr15	82715316	82715317	chr15:82715317:A:G	rs28607761	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	83767764	83767765	chr15:83767765:A:G	rs12898714	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.518641313984426	3.685690362814724	ACCAATTACC
chr15	84836264	84836265	chr15:84836265:T:C	rs7164787	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr15	84836312	84836313	chr15:84836313:T:C	rs7164817	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	84861006	84861007	chr15:84861007:T:A	rs17536107	T	A	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr15	85494776	85494777	chr15:85494777:G:A	rs79665867	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr15	85650477	85650478	chr15:85650478:T:C	rs4240775	T	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr15	85730461	85730462	chr15:85730462:C:T	rs546002746	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.056921200256407	6.672021518494797	AGTAATTACG
chr15	85730470	85730471	chr15:85730471:T:C	rs16943699	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.056921200256407	6.9888053792649805	AGTAATTACG
chr15	85744492	85744493	chr15:85744493:G:A	rs11629690	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr15	86125988	86125989	chr15:86125989:G:T	rs12594338	G	T	g	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr15	86201994	86201995	chr15:86201995:A:G	rs74790450	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr15	86619573	86619574	chr15:86619574:C:T	rs113985341	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr15	86619584	86619585	chr15:86619585:A:C	rs16977848	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr15	86756990	86756991	chr15:86756991:A:C	rs6496359	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.30929062122411	4.309904661261646	AGTAATTAGT
chr15	86854448	86854449	chr15:86854449:A:G	rs183121374	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	87332682	87332683	chr15:87332683:G:A	rs8036553	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	87348441	87348442	chr15:87348442:C:G	rs72749808	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	87434029	87434030	chr15:87434030:G:A	rs17656890	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	88022836	88022837	chr15:88022837:T:A	rs75735105	T	A	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.44231768323065	6.8451776907511785	AGTAATTAGG
chr15	88284527	88284528	chr15:88284528:T:A	rs111498030	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.892679504719707	4.764925612004301	GGCAATTAAG
chr15	88296490	88296491	chr15:88296491:G:A	rs4887404	G	A	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr15	88334299	88334300	chr15:88334300:A:G	rs76628092	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	88614368	88614369	chr15:88614369:T:G	rs12908273	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.007267207914503	5.910384515602703	TGTAATTAGC
chr15	88614370	88614371	chr15:88614371:C:T	rs11856531	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.007267207914503	6.339546441211103	TGTAATTAGC
chr15	89017896	89017897	chr15:89017897:C:T	rs8039741	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr15	89017928	89017929	chr15:89017929:G:A	rs192330120	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	89150931	89150932	chr15:89150932:T:A	rs10520682	T	A	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	89155101	89155102	chr15:89155102:C:T	rs12902156	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	89364215	89364216	chr15:89364216:C:T	rs117538444	C	T	c	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr15	89444504	89444505	chr15:89444505:A:T	rs11637415	A	T	a	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr15	89459906	89459907	chr15:89459907:G:A	rs117785224	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr15	89850575	89850576	chr15:89850576:G:C	rs4932252	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr15	90017649	90017650	chr15:90017650:T:C	rs11629802	T	C	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	90257826	90257827	chr15:90257827:A:T	rs55674131	A	T	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	90402210	90402211	chr15:90402211:C:G	rs2601198	C	G	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr15	90810373	90810374	chr15:90810374:T:C	rs12592875	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	91312908	91312909	chr15:91312909:C:T	rs751108333	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr15	91532832	91532833	chr15:91532833:G:A	rs28623288	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr15	91532867	91532868	chr15:91532868:G:T	chr15:91532868:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	91620080	91620081	chr15:91620081:C:G	rs4267285	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	91852693	91852694	chr15:91852694:C:A	rs114287471	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr15	91852710	91852711	chr15:91852711:G:A	rs72655648	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr15	92243573	92243574	chr15:92243574:T:A	rs7179587	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	92243575	92243576	chr15:92243576:G:T	rs62009280	G	T	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	92500314	92500315	chr15:92500315:T:G	rs7178722	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	6.439408687090748	2.5989095105386806	GGTCATTAGC
chr15	92672138	92672139	chr15:92672139:T:G	rs57086675	T	G	.	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	92792897	92792898	chr15:92792898:A:C	rs62020851	A	C	C	Hoxd3.mouse_homeodomain_1	5	1	-	6.525620950492726	3.526234990530262	CCCAATTAAC
chr15	92797354	92797355	chr15:92797355:G:C	rs74844398	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.30929062122411	7.149359219479759	AGTAATTAGT
chr15	92797370	92797371	chr15:92797371:A:G	rs139983181	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr15	92906143	92906144	chr15:92906144:T:A	rs11074119	T	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr15	93125537	93125538	chr15:93125538:A:G	rs7175201	A	G	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr15	93302392	93302393	chr15:93302393:T:C	rs10083565	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	93553194	93553195	chr15:93553195:T:C	rs13379748	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr15	94352941	94352942	chr15:94352942:C:T	rs59915516	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr15	94419264	94419265	chr15:94419265:T:C	rs7169651	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr15	94580529	94580530	chr15:94580530:C:T	rs28454357	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	94972531	94972532	chr15:94972532:G:A	rs76114912	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	95171863	95171864	chr15:95171864:C:A	rs149215071	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr15	95193052	95193053	chr15:95193053:G:A	rs176656	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	95363756	95363757	chr15:95363757:C:A	rs150039871	C	A	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr15	95498005	95498006	chr15:95498006:G:C	rs3803492	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr15	95557867	95557868	chr15:95557868:C:T	rs111230478	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	96274237	96274238	chr15:96274238:C:A	rs7182413	C	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	96294546	96294547	chr15:96294547:A:G	rs12906150	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr15	96307876	96307877	chr15:96307877:C:T	rs4984536	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr15	96319669	96319670	chr15:96319670:C:T	rs947485039	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.435275621829636	7.140159042659771	GCTAATTAAC
chr15	96362230	96362231	chr15:96362231:T:C	rs35721523	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr15	96488837	96488838	chr15:96488838:C:T	rs8032562	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.678572715728777	6.383456136558912	AGCAATTACC
chr15	96494011	96494012	chr15:96494012:T:C	rs12593432	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	96960610	96960611	chr15:96960611:T:C	rs2159620	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr15	97052706	97052707	chr15:97052707:A:G	rs1106828	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr15	98127693	98127694	chr15:98127694:C:T	rs28449535	C	T	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	98304565	98304566	chr15:98304566:G:C	rs140310379	G	C	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	98444203	98444204	chr15:98444204:C:T	rs11635298	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr15	98447170	98447171	chr15:98447171:C:G	rs35213300	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	98482757	98482758	chr15:98482758:C:T	rs56762677	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	98658343	98658344	chr15:98658344:A:C	rs34038360	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.540805396797378	4.091649926522525	GCCAATTAGT
chr15	98779863	98779864	chr15:98779864:A:G	rs1434544836	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr15	98933788	98933789	chr15:98933789:C:T	rs12440892	C	T	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr15	98933815	98933816	chr15:98933816:G:A	rs12438493	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	99056153	99056154	chr15:99056154:C:T	rs2654963	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	99075987	99075988	chr15:99075988:A:T	rs72754897	A	T	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr15	99477228	99477229	chr15:99477229:C:T	rs4965250	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	99646284	99646285	chr15:99646285:A:C	rs116924016	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.9039694350203575	3.0634702584682896	CCTAATTAAG
chr15	99669220	99669221	chr15:99669221:G:A	rs3784450	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	99669224	99669225	chr15:99669225:G:C	rs116837045	G	C	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	99820471	99820472	chr15:99820472:G:T	rs56160817	G	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	100060072	100060073	chr15:100060073:T:A	rs12901866	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	100092684	100092685	chr15:100092685:G:A	rs577704614	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	100154944	100154945	chr15:100154945:G:A	rs8034605	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	100154980	100154981	chr15:100154981:G:A	rs78510225	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr15	100202580	100202581	chr15:100202581:G:A	rs8035836	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	100230885	100230886	chr15:100230886:C:G	rs373921310	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr15	100603325	100603326	chr15:100603326:C:A	rs67616875	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr15	100684891	100684892	chr15:100684892:T:C	rs2002791	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr15	100721720	100721721	chr15:100721721:C:T	rs1867039	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr15	100721756	100721757	chr15:100721757:G:A	rs76140144	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	100738101	100738102	chr15:100738102:T:C	rs11247232	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	100782336	100782337	chr15:100782337:A:T	rs11637451	A	T	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	101101923	101101924	chr15:101101924:G:A	rs11854208	G	A	-	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	101107823	101107824	chr15:101107824:T:C	rs2085161	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	101127020	101127021	chr15:101127021:T:C	rs4965789	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr15	101175240	101175241	chr15:101175241:G:A	rs116862695	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.8337638605482685	6.166043093844867	GGCAATTAGG
chr15	101256542	101256543	chr15:101256543:G:A	rs28690028	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.892679504719707	6.507779822958097	GGCAATTAAG
chr15	101374710	101374711	chr15:101374711:A:G	rs28669804	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr15	101440303	101440304	chr15:101440304:C:A	rs111278162	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	101440310	101440311	chr15:101440311:A:C	rs939847013	A	C	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	52638	52639	chr16:52639:G:A	chr16:52639:G:A	G	A	g	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr16	402617	402618	chr16:402618:C:T	rs77003990	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	5.739039283655441	5.79795492782688	GCCCATTAGC
chr16	601064	601065	chr16:601065:C:T	rs116257690	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.439408687090748	6.144292107920884	GGTCATTAGC
chr16	606841	606842	chr16:606842:G:T	rs12149951	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.894837620138681	5.091803679174908	GCCAATTAAC
chr16	963666	963667	chr16:963667:C:T	rs55678651	C	T	.	Hoxd3.mouse_homeodomain_1	0	1	-	6.6738324588039175	6.741948279795344	GCCAATTAGG
chr16	963667	963668	chr16:963668:G:T	rs55671279	G	T	.	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	1037614	1037615	chr16:1037615:T:G	rs118012096	T	G	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	1315965	1315966	chr16:1315966:C:T	rs4984808	C	T	c	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr16	1749405	1749406	chr16:1749406:A:G	rs4786518	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	2610715	2610716	chr16:2610716:G:A	rs4786299	G	A	-	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	2889943	2889944	chr16:2889944:G:A	rs79424176	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr16	3077938	3077939	chr16:3077939:C:T	rs1985560	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	+	6.962953441130107	6.667836861960243	ACCAATTAAC
chr16	3236170	3236171	chr16:3236171:A:C	rs76643033	A	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr16	3637598	3637599	chr16:3637599:C:G	rs182468845	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	3978058	3978059	chr16:3978059:A:G	rs2601775	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr16	4200913	4200914	chr16:4200914:C:A	rs879151	C	A	A	Hoxd3.mouse_homeodomain_1	2	1	+	6.525620950492726	4.7225870095289535	CCCAATTAAC
chr16	4328176	4328177	chr16:4328177:A:G	rs2906899	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr16	4479611	4479612	chr16:4479612:A:G	rs6500610	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr16	4626593	4626594	chr16:4626594:A:G	rs1684609	A	G	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	4626612	4626613	chr16:4626613:G:T	rs1659488	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	4918905	4918906	chr16:4918906:T:G	chr16:4918906:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	5741351	5741352	chr16:5741352:A:G	rs78063839	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr16	6008857	6008858	chr16:6008858:G:T	rs77166887	G	T	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	6044555	6044556	chr16:6044556:C:A	rs12926282	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	6361670	6361671	chr16:6361671:G:C	rs7187868	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.4444757986496235	7.282386281486299	ACTAATTAGC
chr16	6499045	6499046	chr16:6499046:C:G	rs17140359	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.663322844565413	7.501233327402089	AGTAATTAAC
chr16	6629784	6629785	chr16:6629785:C:T	rs970865124	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	6633676	6633677	chr16:6633677:T:G	rs72762959	T	G	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	6708756	6708757	chr16:6708757:G:C	rs1159821241	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr16	6825202	6825203	chr16:6825203:T:C	rs7195837	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	7035748	7035749	chr16:7035749:G:C	rs76611178	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr16	7172591	7172592	chr16:7172592:T:C	rs2061809	T	C	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr16	7658511	7658512	chr16:7658512:C:A	rs77191135	C	A	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr16	7745276	7745277	chr16:7745277:G:A	rs74331698	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr16	7804072	7804073	chr16:7804073:T:C	rs117397033	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	8146065	8146066	chr16:8146066:T:C	rs7187922	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr16	8466405	8466406	chr16:8466406:C:G	rs11077307	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.501233327402089	7.663322844565413	AGTAATTAAG
chr16	8510486	8510487	chr16:8510487:A:G	rs4787235	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	8531221	8531222	chr16:8531222:G:A	rs114324083	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	5.898970685399792	6.439408687090748	GGCCATTAGC
chr16	8721393	8721394	chr16:8721394:C:T	rs60732583	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr16	8722277	8722278	chr16:8722278:C:T	rs57717886	C	T	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	8728121	8728122	chr16:8728122:G:C	rs11645254	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	8957089	8957090	chr16:8957090:T:C	rs76161145	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.30929062122411	5.320432719310928	AGTAATTAGT
chr16	9042987	9042988	chr16:9042988:C:T	rs62033702	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	9099865	9099866	chr16:9099866:T:G	rs34932929	T	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	9428802	9428803	chr16:9428803:A:G	rs16965238	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	10093792	10093793	chr16:10093793:T:C	rs909113879	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	10168631	10168632	chr16:10168632:G:A	rs9935607	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	10188509	10188510	chr16:10188510:G:A	rs1097867	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	10578270	10578271	chr16:10578271:G:T	rs2354423	G	T	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	10601081	10601082	chr16:10601082:C:T	rs79356182	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.0639691987030195	6.396248431999618	AGCAATTAGC
chr16	10684584	10684585	chr16:10684585:A:G	rs7187444	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr16	10684615	10684616	chr16:10684616:T:A	rs4780980	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	11295351	11295352	chr16:11295352:A:T	rs143781526	A	T	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.892679504719707	4.072093110934433	GGCAATTAAG
chr16	11295369	11295370	chr16:11295370:G:C	rs148138217	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	11418041	11418042	chr16:11418042:T:C	rs62023826	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	11538851	11538852	chr16:11538852:T:C	rs34484629	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	11640663	11640664	chr16:11640664:A:C	rs543322699	A	C	a	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	11701038	11701039	chr16:11701039:C:T	rs17606153	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	11706159	11706160	chr16:11706160:G:A	rs76815491	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	11793673	11793674	chr16:11793674:A:T	rs8056774	A	T	T	Hoxd3.mouse_homeodomain_1	5	1	-	6.732748102975356	2.9560489811582875	GCCAATTAAG
chr16	11907589	11907590	chr16:11907590:G:C	rs7184515	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.604407200393974	7.2190107174197315	AGTAATTAGC
chr16	12084939	12084940	chr16:12084940:C:T	rs2457193	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr16	12155451	12155452	chr16:12155452:T:A	rs4781188	T	A	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr16	12215824	12215825	chr16:12215825:C:T	rs830726	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	12315534	12315535	chr16:12315535:G:A	rs209851	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.433117506410662	6.765396739707261	GGTAATTAAG
chr16	12416481	12416482	chr16:12416482:A:C	rs57913527	A	C	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	12432240	12432241	chr16:12432241:G:A	rs4781239	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	12526971	12526972	chr16:12526972:G:A	rs190013	G	A	a	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	12612453	12612454	chr16:12612454:T:A	rs74011180	T	A	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	12906415	12906416	chr16:12906416:A:C	rs751349658	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.214270460494872	6.117387768183073	GCTAATTAGG
chr16	13070717	13070718	chr16:13070718:A:G	rs28622238	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr16	13225880	13225881	chr16:13225881:G:C	rs204026	G	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	13802561	13802562	chr16:13802562:G:T	rs7189739	G	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	13923945	13923946	chr16:13923946:G:T	chr16:13923946:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.845053790848919	6.712026728842379	CCTAATTAGG
chr16	13949317	13949318	chr16:13949318:C:G	rs2276466	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr16	14036903	14036904	chr16:14036904:T:C	rs12920252	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr16	14097397	14097398	chr16:14097398:G:T	rs72783461	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	15072374	15072375	chr16:15072375:A:G	rs11075255	A	G	.	Hoxd3.mouse_homeodomain_1	2	1	-	7.595207023573987	7.054769021883032	GGTAATTAAC
chr16	15510009	15510010	chr16:15510010:T:C	rs116402141	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr16	15510010	15510011	chr16:15510011:C:A	rs75928495	C	A	c	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr16	15674139	15674140	chr16:15674140:G:A	rs4780577	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	15903508	15903509	chr16:15903509:C:T	rs543582579	C	T	c	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	16780554	16780555	chr16:16780555:G:A	rs7194246	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	16817890	16817891	chr16:16817891:T:G	rs7404193	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	6.8337638605482685	2.9932646839962005	GGCAATTAGG
chr16	17225690	17225691	chr16:17225691:C:A	rs74010746	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	17508496	17508497	chr16:17508497:G:A	rs8048840	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	17508526	17508527	chr16:17508527:C:T	rs57724628	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr16	17508527	17508528	chr16:17508528:G:A	rs74881950	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	5.736881168236468	5.804996989227894	GGCCATTAGG
chr16	18023002	18023003	chr16:18023003:T:C	rs76419423	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	18793414	18793415	chr16:18793415:C:T	rs2650628	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	19140896	19140897	chr16:19140897:G:A	rs4782211	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	19524946	19524947	chr16:19524947:G:A	rs190212619	G	A	g	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	19573961	19573962	chr16:19573962:T:A	rs36109220	T	A	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	19601569	19601570	chr16:19601570:C:T	rs55755551	C	T	c	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	20051556	20051557	chr16:20051557:G:A	rs12924533	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	20323356	20323357	chr16:20323357:C:T	rs4411505	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	20515383	20515384	chr16:20515384:A:T	rs2188757	A	T	.	Hoxd3.mouse_homeodomain_1	3	1	+	6.518641313984426	4.429143982153848	ACCAATTACC
chr16	21501904	21501905	chr16:21501905:A:G	rs115148965	A	G	.	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	22437413	22437414	chr16:22437414:C:T	rs527294525	C	T	.	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr16	24114416	24114417	chr16:24114417:T:C	rs28603301	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	24114427	24114428	chr16:24114428:G:T	rs6497725	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	24151789	24151790	chr16:24151790:A:G	rs977022169	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	24382973	24382974	chr16:24382974:C:T	rs7198473	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	24670954	24670955	chr16:24670955:C:T	rs189621201	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	24700642	24700643	chr16:24700643:G:A	rs9929676	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	25288197	25288198	chr16:25288198:C:T	rs13330567	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	25432858	25432859	chr16:25432859:C:G	rs34376676	C	G	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr16	25854403	25854404	chr16:25854404:C:T	rs4622515	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	25937886	25937887	chr16:25937887:C:T	rs55878075	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr16	26087121	26087122	chr16:26087122:T:C	rs7199218	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	26087132	26087133	chr16:26087133:A:T	rs7197687	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	27359132	27359133	chr16:27359133:A:G	rs3024658	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	27421875	27421876	chr16:27421876:T:C	rs179763	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	27547349	27547350	chr16:27547350:A:G	rs116642799	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.341301925657738	5.352444023744556	ACTAATTAAG
chr16	27707211	27707212	chr16:27707212:A:G	rs571017305	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	27815738	27815739	chr16:27815739:A:G	rs1709783	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	28878809	28878810	chr16:28878810:C:A	rs62037371	C	A	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	29112828	29112829	chr16:29112829:G:A	rs1641996	G	A	.	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr16	29187932	29187933	chr16:29187933:T:C	rs200039374	T	C	.	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	29341808	29341809	chr16:29341809:C:T	rs79437555	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr16	29710774	29710775	chr16:29710775:T:C	rs868745603	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.341301925657738	4.481205482096991	ACTAATTAAG
chr16	29821058	29821059	chr16:29821059:G:A	rs78193656	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr16	29822228	29822229	chr16:29822229:T:G	rs755164361	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.894837620138681	6.450525492992999	GCCAATTAAC
chr16	29899746	29899747	chr16:29899747:G:T	rs77905673	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr16	30036598	30036599	chr16:30036599:T:C	rs8051721	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr16	30036608	30036609	chr16:30036609:G:A	rs4788215	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr16	30811087	30811088	chr16:30811088:G:A	rs13337900	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	31072002	31072003	chr16:31072003:G:A	rs6565217	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	31198361	31198362	chr16:31198362:G:T	rs141213167	G	T	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	31272422	31272423	chr16:31272423:C:G	rs8056944	C	G	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.894837620138681	6.732748102975356	GCCAATTAAC
chr16	32920533	32920534	chr16:32920534:G:A	rs74510684	G	A	g	Hoxd3.mouse_homeodomain_1	0	1	+	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr16	35752992	35752993	chr16:35752993:A:T	rs8051145	A	T	a	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	48589627	48589628	chr16:48589628:C:T	rs9931737	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	+	7.435275621829636	7.140159042659771	GCTAATTAAC
chr16	48592114	48592115	chr16:48592115:C:T	rs77702353	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr16	48950331	48950332	chr16:48950332:T:C	rs7186607	T	C	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.30929062122411	6.768852619533155	AGTAATTAGT
chr16	48959150	48959151	chr16:48959151:G:T	rs11642355	G	T	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	48969061	48969062	chr16:48969062:G:A	rs16946704	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr16	49049317	49049318	chr16:49049318:G:A	rs12927723	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr16	49054483	49054484	chr16:49054484:G:C	rs2908877	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr16	49250947	49250948	chr16:49250948:T:A	rs144417330	T	A	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr16	49455947	49455948	chr16:49455948:A:G	rs7186548	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	49568071	49568072	chr16:49568072:G:T	rs193190400	G	T	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr16	49673097	49673098	chr16:49673098:C:G	rs984002131	C	G	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	49742726	49742727	chr16:49742727:T:C	rs59953785	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.901879681539695	2.7453202802030847	AGCAATTAGG
chr16	49755294	49755295	chr16:49755295:C:G	rs185621624	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	49823132	49823133	chr16:49823133:C:T	rs12917979	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr16	49961715	49961716	chr16:49961716:C:T	rs4386136	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	50067829	50067830	chr16:50067830:A:G	rs72796139	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	50147207	50147208	chr16:50147208:T:C	rs1043720637	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr16	50266249	50266250	chr16:50266250:G:A	rs763924984	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	50446444	50446445	chr16:50446445:G:A	rs142029571	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	50499219	50499220	chr16:50499220:C:T	rs57187472	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr16	50642602	50642603	chr16:50642603:G:A	rs7199150	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	50824899	50824900	chr16:50824900:A:C	rs1548994	A	C	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr16	51093976	51093977	chr16:51093977:A:G	rs7204514	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	51568402	51568403	chr16:51568403:G:T	rs76019747	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	52377342	52377343	chr16:52377343:C:T	rs1124408	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.167074709756593	7.007267207914503	CGTAATTAGC
chr16	52422553	52422554	chr16:52422554:G:A	rs72805462	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	52491372	52491373	chr16:52491373:C:T	rs1978343	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr16	52572324	52572325	chr16:52572325:A:G	rs3104755	A	G	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	52826238	52826239	chr16:52826239:C:T	rs56118122	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr16	53090209	53090210	chr16:53090210:A:G	chr16:53090210:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr16	53465686	53465687	chr16:53465687:A:G	rs1072910	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.8337638605482685	3.9736674169875204	GGCAATTAGG
chr16	53465698	53465699	chr16:53465699:A:C	rs73608320	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr16	53695180	53695181	chr16:53695181:G:A	rs568908184	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr16	53892877	53892878	chr16:53892878:A:G	rs17820875	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr16	54172550	54172551	chr16:54172551:A:G	rs59046992	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	54291310	54291311	chr16:54291311:G:A	rs34124352	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr16	54331405	54331406	chr16:54331406:T:C	rs11076028	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr16	54331434	54331435	chr16:54331435:G:T	rs11076029	G	T	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	54739285	54739286	chr16:54739286:G:A	rs1477082	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	55152068	55152069	chr16:55152069:A:T	rs75631051	A	T	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.374201862239223	5.030729919584495	GGTAATTAGG
chr16	55213048	55213049	chr16:55213049:A:G	rs2003305	A	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	55274037	55274038	chr16:55274038:T:C	rs8045188	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr16	55330204	55330205	chr16:55330205:G:C	rs139328528	G	C	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	55442581	55442582	chr16:55442582:A:T	rs11647081	A	T	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.300090444404122	7.048217824649052	GGTAATTAAT
chr16	55465456	55465457	chr16:55465457:C:A	rs555881278	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	55614747	55614748	chr16:55614748:C:T	rs9788806	C	T	c	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr16	55947302	55947303	chr16:55947303:C:G	rs7193694	C	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	56041317	56041318	chr16:56041318:C:T	rs7196109	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr16	56077448	56077449	chr16:56077449:A:G	rs74596009	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	56082833	56082834	chr16:56082834:A:G	rs1530817	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr16	56547523	56547524	chr16:56547524:G:T	rs182258005	G	T	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	56629387	56629388	chr16:56629388:C:G	rs1604122	C	G	.	Hoxd3.mouse_homeodomain_1	1	1	+	6.117387768183073	6.277319169927424	GCTCATTAGG
chr16	56784346	56784347	chr16:56784347:A:C	rs77755067	A	C	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	57611594	57611595	chr16:57611595:G:A	rs7204900	G	A	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	57932722	57932723	chr16:57932723:G:A	rs111261915	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	58281726	58281727	chr16:58281727:C:T	rs16960035	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	6.685552352237077	6.525744850394987	CGCAATTAAC
chr16	58486809	58486810	chr16:58486810:A:G	rs763240749	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.901879681539695	4.041783237978947	AGCAATTAGG
chr16	58686961	58686962	chr16:58686962:G:T	rs112643426	G	T	g	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr16	58848592	58848593	chr16:58848593:G:A	rs972702896	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.374201862239223	7.44231768323065	GGTAATTAGG
chr16	59062996	59062997	chr16:59062997:T:C	rs7194518	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	59151862	59151863	chr16:59151863:G:C	rs12927771	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	60485805	60485806	chr16:60485806:C:T	rs9930207	C	T	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr16	60485934	60485935	chr16:60485935:A:G	rs74020517	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	60681454	60681455	chr16:60681455:A:T	rs146178509	A	T	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	61630350	61630351	chr16:61630351:T:G	rs2407927	T	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr16	61682421	61682422	chr16:61682422:T:C	rs16963809	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	63144445	63144446	chr16:63144446:T:C	rs146045759	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.503391442821062	6.962953441130107	ACTAATTAAC
chr16	63350111	63350112	chr16:63350112:A:G	rs12922390	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	63697697	63697698	chr16:63697698:C:T	rs56078845	C	T	c	Hoxd3.mouse_homeodomain_1	0	1	-	6.989302180477614	7.05741800146904	GGTAATTAGA
chr16	63789773	63789774	chr16:63789774:T:C	rs35574	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr16	63976809	63976810	chr16:63976810:T:C	rs77636060	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	63976814	63976815	chr16:63976815:C:G	rs115060454	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	64363242	64363243	chr16:64363243:A:G	rs146413077	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr16	64425137	64425138	chr16:64425138:C:T	rs62041601	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	64440952	64440953	chr16:64440953:A:G	rs62041642	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr16	64481496	64481497	chr16:64481497:T:G	rs9936857	T	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	64490049	64490050	chr16:64490050:A:G	rs13337190	A	G	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr16	64498473	64498474	chr16:64498474:A:G	rs59367532	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	64659672	64659673	chr16:64659673:G:T	rs73583728	G	T	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr16	64659690	64659691	chr16:64659691:C:G	rs144982572	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.0639691987030195	6.678572715728777	AGCAATTAGC
chr16	64820277	64820278	chr16:64820278:A:G	rs62044495	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr16	65289845	65289846	chr16:65289846:A:G	rs7203963	A	G	a	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	65574670	65574671	chr16:65574671:C:T	rs4238836	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	6.6266367080656385	5.958915941362238	CGCAATTAGC
chr16	65773439	65773440	chr16:65773440:G:C	rs1075055	G	C	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	65808963	65808964	chr16:65808964:T:C	rs145752004	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr16	66461423	66461424	chr16:66461424:T:G	rs4783599	T	G	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	66704935	66704936	chr16:66704936:A:G	rs355918	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr16	66736981	66736982	chr16:66736982:T:C	rs7200231	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr16	67356638	67356639	chr16:67356639:T:A	rs78540639	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	68479483	68479484	chr16:68479484:C:T	rs17621696	C	T	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	68902512	68902513	chr16:68902513:A:C	rs1340061913	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr16	69385179	69385180	chr16:69385180:T:A	rs8061382	T	A	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr16	69718059	69718060	chr16:69718060:G:A	rs370977215	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.214270460494872	6.829370778733263	GCTAATTAGG
chr16	69727659	69727660	chr16:69727660:C:T	rs689456	C	T	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr16	69880674	69880675	chr16:69880675:C:G	rs55635123	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	70700466	70700467	chr16:70700467:C:T	rs139159999	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr16	71338579	71338580	chr16:71338580:A:G	rs918757	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr16	71343407	71343408	chr16:71343408:G:A	rs35593117	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	71345479	71345480	chr16:71345480:A:T	rs17343100	A	T	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr16	71927631	71927632	chr16:71927632:A:C	rs79258602	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr16	72179791	72179792	chr16:72179792:G:C	rs55955726	G	C	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	72578948	72578949	chr16:72578949:C:A	rs8046749	C	A	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	72911220	72911221	chr16:72911221:C:A	rs9923980	C	A	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr16	73050836	73050837	chr16:73050837:G:A	rs867521983	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.288435975829675	5.938662426129746	GCCAATTACG
chr16	73176629	73176630	chr16:73176630:A:T	rs59902979	A	T	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr16	73395538	73395539	chr16:73395539:T:C	rs4636929	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr16	73479213	73479214	chr16:73479214:T:A	rs2890402	T	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr16	73543524	73543525	chr16:73543525:G:T	chr16:73543525:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr16	73813724	73813725	chr16:73813725:T:A	rs2244324	T	A	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	73813731	73813732	chr16:73813732:T:G	rs28570416	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.439408687090748	5.1238009506199065	GGTCATTAGC
chr16	74400118	74400119	chr16:74400119:A:G	rs143210295	A	G	.	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	74448154	74448155	chr16:74448155:G:A	rs13359	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr16	74616093	74616094	chr16:74616094:G:T	rs6564149	G	T	g	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr16	74701830	74701831	chr16:74701831:T:G	rs2057806	T	G	G	Hoxd3.mouse_homeodomain_1	5	1	+	6.962953441130107	3.963567481167643	ACCAATTAAC
chr16	75196116	75196117	chr16:75196117:A:G	rs1559361	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	75196138	75196139	chr16:75196139:A:G	rs3948510	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.30929062122411	3.1527312198875004	AGTAATTAGT
chr16	75733865	75733866	chr16:75733866:T:C	rs76838143	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.901879681539695	6.8337638605482685	AGCAATTAGG
chr16	76031658	76031659	chr16:76031659:C:T	rs75098994	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.507524508082175	5.514909868563397	AGTCATTAGC
chr16	76446358	76446359	chr16:76446359:A:G	rs6564338	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr16	76614362	76614363	chr16:76614363:T:C	rs72801266	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr16	76848954	76848955	chr16:76848955:A:C	rs80060704	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	77503595	77503596	chr16:77503596:C:T	rs13336130	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	77503596	77503597	chr16:77503597:G:A	rs1239874241	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	77721581	77721582	chr16:77721582:C:A	rs11863999	C	A	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr16	77746344	77746345	chr16:77746345:G:A	rs60818693	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr16	77952044	77952045	chr16:77952045:T:A	rs529207598	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.904037796958669	4.776283904243263	ACCAATTAGC
chr16	78002189	78002190	chr16:78002190:A:G	rs4243142	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.678572715728777	3.818476272168029	AGCAATTACC
chr16	78098376	78098377	chr16:78098377:T:C	rs10220974	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	78196613	78196614	chr16:78196614:G:A	rs113155230	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	78196637	78196638	chr16:78196638:C:T	rs80303448	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr16	78488715	78488716	chr16:78488716:T:C	rs2738706	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	78488742	78488743	chr16:78488743:T:C	rs189110065	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr16	78492412	78492413	chr16:78492413:G:C	rs73578907	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr16	78641748	78641749	chr16:78641749:G:A	rs146084557	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr16	78681688	78681689	chr16:78681689:T:G	rs2738622	T	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr16	78773336	78773337	chr16:78773337:G:A	rs7199334	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr16	78781082	78781083	chr16:78781083:C:G	rs1072898	C	G	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.374201862239223	7.004985192593269	GGTAATTAGG
chr16	78896632	78896633	chr16:78896633:A:C	rs9931349	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr16	78973252	78973253	chr16:78973253:A:G	rs527536777	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.501233327402089	7.433117506410662	AGTAATTAAG
chr16	79175869	79175870	chr16:79175870:G:C	rs2011394	G	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	79418483	79418484	chr16:79418484:G:A	rs7499736	G	A	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	79573989	79573990	chr16:79573990:G:C	rs444640	G	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	79588188	79588189	chr16:79588189:T:A	rs76587823	T	A	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	79802004	79802005	chr16:79802005:G:T	rs76866891	G	T	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr16	79848428	79848429	chr16:79848429:C:T	rs11641099	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	80380714	80380715	chr16:80380715:T:C	rs1384995	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	80514744	80514745	chr16:80514745:G:C	rs71386291	G	C	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr16	80514745	80514746	chr16:80514746:C:T	rs4586444	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr16	80619364	80619365	chr16:80619365:C:T	rs4889166	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.279477285346397	6.338392929517836	GCTCATTAGC
chr16	80619377	80619378	chr16:80619378:C:T	rs4889167	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	81551367	81551368	chr16:81551368:A:G	rs565390040	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.376359977658197	4.51626353409745	GCTAATTAGC
chr16	81786910	81786911	chr16:81786911:A:G	rs4243211	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr16	81992229	81992230	chr16:81992230:C:G	rs16956130	C	G	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr16	82171425	82171426	chr16:82171426:T:C	rs2911378	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr16	82225099	82225100	chr16:82225100:A:G	rs62046763	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	82300760	82300761	chr16:82300761:G:A	rs7197718	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	82350822	82350823	chr16:82350823:T:A	rs9938062	T	A	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	82379689	82379690	chr16:82379690:G:A	rs12929911	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	82547536	82547537	chr16:82547537:C:G	rs8044937	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	82653961	82653962	chr16:82653962:G:A	rs116495809	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr16	82653967	82653968	chr16:82653968:A:G	rs28751987	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr16	82653969	82653970	chr16:82653970:A:G	rs28439212	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr16	82694421	82694422	chr16:82694422:A:G	rs117685833	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr16	82847625	82847626	chr16:82847626:A:C	rs12148992	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.433117506410662	4.433731546448198	GGTAATTAAG
chr16	82883312	82883313	chr16:82883313:A:G	rs62035221	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	83116631	83116632	chr16:83116632:A:G	rs58239827	A	G	a	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr16	83466552	83466553	chr16:83466553:C:G	rs2325831	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr16	83474149	83474150	chr16:83474150:A:T	chr16:83474150:A:T	A	T	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	83514294	83514295	chr16:83514295:A:T	rs4583231	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr16	83577365	83577366	chr16:83577366:C:G	rs4077575	C	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	83605593	83605594	chr16:83605594:C:A	rs7201413	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	83653123	83653124	chr16:83653124:T:A	rs73246698	T	A	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.540805396797378	2.7641062749803096	GCCAATTAGT
chr16	83706520	83706521	chr16:83706521:T:C	rs1364120	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	83706530	83706531	chr16:83706531:T:C	rs1364119	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.279477285346397	-0.5610799390722622	GCTCATTAGC
chr16	83819423	83819424	chr16:83819424:G:A	rs40007	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	83975796	83975797	chr16:83975797:T:C	rs2247470	T	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	83983683	83983684	chr16:83983684:G:T	rs79142310	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.741948279795344	6.234158914836294	ACCAATTAGG
chr16	84029870	84029871	chr16:84029871:T:C	rs533378258	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.450525492992999	3.5904290494322515	GCCAATTACC
chr16	84210054	84210055	chr16:84210055:G:C	rs8051996	G	C	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.741948279795344	6.904037796958669	ACCAATTAGG
chr16	84267667	84267668	chr16:84267668:G:A	rs77836683	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	84428305	84428306	chr16:84428306:T:G	rs76330096	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.241174800232684	3.33407974213175	GGTAATTAGT
chr16	84735869	84735870	chr16:84735870:C:T	rs563833599	C	T	c	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr16	84968206	84968207	chr16:84968207:C:A	rs1566462	C	A	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	84995167	84995168	chr16:84995168:C:T	rs3848250	C	T	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr16	85086942	85086943	chr16:85086943:G:A	rs146370127	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr16	85086948	85086949	chr16:85086949:C:T	rs72805499	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr16	85130095	85130096	chr16:85130096:T:C	rs115311577	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	3.881851836234596	ACCAATTAGG
chr16	85168937	85168938	chr16:85168938:T:C	rs571487344	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.304615789157963	2.1480563878213528	CCCAATTAGG
chr16	85263094	85263095	chr16:85263095:A:T	rs11864292	A	T	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr16	85335438	85335439	chr16:85335439:G:A	rs960617225	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr16	85445243	85445244	chr16:85445244:C:T	rs145193691	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	85452311	85452312	chr16:85452312:C:T	rs4783207	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	85462599	85462600	chr16:85462600:T:G	chr16:85462600:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	85485596	85485597	chr16:85485597:A:G	rs186003411	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.279477285346397	3.446526334176696	GCTCATTAGC
chr16	85588418	85588419	chr16:85588419:G:A	rs144741529	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	85626764	85626765	chr16:85626765:G:T	rs28507623	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.056921200256407	6.923894138249867	AGTAATTACG
chr16	85643366	85643367	chr16:85643367:G:A	rs74034004	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	85723963	85723964	chr16:85723964:C:T	rs77266987	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr16	85753760	85753761	chr16:85753761:C:A	rs1163607754	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr16	85909859	85909860	chr16:85909860:T:C	rs305077	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr16	85926613	85926614	chr16:85926614:G:A	rs7206172	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr16	85926624	85926625	chr16:85926625:G:C	rs11644411	G	C	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr16	85949719	85949720	chr16:85949720:T:G	rs8062690	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.466705306321288	2.62620612976922	CCCAATTAGC
chr16	86072646	86072647	chr16:86072647:T:C	rs74034215	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr16	86072678	86072679	chr16:86072679:G:A	rs74034216	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	86074913	86074914	chr16:86074914:C:T	rs11648611	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	86118731	86118732	chr16:86118732:C:A	rs61462202	C	A	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	86118812	86118813	chr16:86118813:A:G	rs9927259	A	G	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	86343776	86343777	chr16:86343777:C:A	rs71390817	C	A	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr16	86505875	86505876	chr16:86505876:C:A	rs117970435	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	86670342	86670343	chr16:86670343:C:T	rs62042090	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr16	86672010	86672011	chr16:86672011:C:T	rs186417574	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	86711347	86711348	chr16:86711348:C:T	rs889776	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	86738270	86738271	chr16:86738271:A:G	rs9931371	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr16	86761937	86761938	chr16:86761938:C:G	rs116015612	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.007267207914503	6.62187072494026	TGTAATTAGC
chr16	86772713	86772714	chr16:86772714:C:A	rs73267042	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr16	86825072	86825073	chr16:86825073:T:G	rs115595161	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr16	87457911	87457912	chr16:87457912:G:A	rs766742152	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr16	87657047	87657048	chr16:87657048:C:G	rs66479826	C	G	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	87790411	87790412	chr16:87790412:C:T	rs111394232	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	87853227	87853228	chr16:87853228:C:T	rs77295914	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	87896301	87896302	chr16:87896302:T:C	rs552783859	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	88154000	88154001	chr16:88154001:C:G	rs9922902	C	G	-	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr16	88686485	88686486	chr16:88686486:G:A	rs960720764	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	88686506	88686507	chr16:88686507:T:A	rs570788916	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.279477285346397	3.458890891561123	GCTCATTAGC
chr16	88686507	88686508	chr16:88686508:A:G	rs538181754	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.279477285346397	2.122917884009787	GCTCATTAGC
chr16	88686511	88686512	chr16:88686512:T:C	rs564158035	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr16	88686515	88686516	chr16:88686516:G:T	rs531451699	G	T	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr16	88870774	88870775	chr16:88870775:C:G	rs112104006	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	89162658	89162659	chr16:89162659:A:G	rs112034896	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr16	89162679	89162680	chr16:89162680:T:C	rs4352046	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.6738324588039175	2.5172730574673072	GCCAATTAGG
chr16	89825210	89825211	chr16:89825211:G:A	rs11641726	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr16	90046198	90046199	chr16:90046199:G:A	rs560371991	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.901879681539695	7.44231768323065	AGCAATTAGG
chr17	219839	219840	chr17:219840:C:T	rs62059561	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	227947	227948	chr17:227948:G:A	rs528117058	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	355273	355274	chr17:355274:A:G	rs11657335	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.450525492992999	3.6175745418232976	GCCAATTACC
chr17	365102	365103	chr17:365103:A:T	rs4985605	A	T	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr17	1046656	1046657	chr17:1046657:G:A	rs2260052	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	5.898970685399792	5.967086506391219	GGCCATTAGC
chr17	1116443	1116444	chr17:1116444:T:C	rs12939615	T	C	c	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr17	1276402	1276403	chr17:1276403:C:A	rs965797430	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	1276405	1276406	chr17:1276406:C:T	rs577637884	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	1322645	1322646	chr17:1322646:T:G	rs2361573	T	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr17	2011770	2011771	chr17:2011771:A:G	chr17:2011771:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	2028360	2028361	chr17:2028361:A:G	rs9911368	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	2240910	2240911	chr17:2240911:G:A	rs118075173	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.004985192593269	6.3372644258898685	CGTAATTAGG
chr17	2359408	2359409	chr17:2359409:C:T	rs4790333	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	5.736881168236468	5.351981486474858	GGCCATTAGG
chr17	2399952	2399953	chr17:2399953:C:T	chr17:2399953:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr17	3577101	3577102	chr17:3577102:C:T	rs8078936	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr17	3693191	3693192	chr17:3693192:A:C	rs12450224	A	C	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	4136660	4136661	chr17:4136661:T:C	rs8070665	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	4161732	4161733	chr17:4161733:C:A	rs137983727	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	4174244	4174245	chr17:4174245:C:A	rs80008187	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	4555913	4555914	chr17:4555914:C:A	rs3760194	C	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	4736301	4736302	chr17:4736302:G:T	rs8071612	G	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.9888053792649805	7.433117506410662	GGTAATTACG
chr17	4901294	4901295	chr17:4901295:C:A	chr17:4901295:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	4901294	4901295	chr17:4901295:C:T	rs563436065	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	4934455	4934456	chr17:4934456:C:T	rs371909342	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	5.736881168236468	5.804996989227894	GGCCATTAGG
chr17	5413955	5413956	chr17:5413956:A:C	rs149115747	A	C	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	5662142	5662143	chr17:5662143:G:A	rs7221898	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr17	6186903	6186904	chr17:6186904:A:G	rs9891753	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	6361896	6361897	chr17:6361897:G:A	rs74681041	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	6475655	6475656	chr17:6475656:T:C	rs4796502	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	6489122	6489123	chr17:6489123:C:T	rs17202180	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	7309177	7309178	chr17:7309178:A:C	rs1052368349	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	7404266	7404267	chr17:7404267:A:G	rs751187767	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	8200320	8200321	chr17:8200321:A:C	rs1255414411	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.892679504719707	5.7957968124079065	GGCAATTAAG
chr17	8200341	8200342	chr17:8200342:A:G	rs547154605	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr17	8412330	8412331	chr17:8412331:G:A	rs11654033	G	A	g	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr17	8500006	8500007	chr17:8500007:A:G	rs7213261	A	G	a	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	8500008	8500009	chr17:8500009:T:C	rs7217409	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	8717608	8717609	chr17:8717609:G:A	rs58956266	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	8789791	8789792	chr17:8789792:G:A	rs12452292	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr17	8789793	8789794	chr17:8789794:G:A	rs4791754	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr17	8868703	8868704	chr17:8868704:C:A	rs143021211	C	A	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr17	9054812	9054813	chr17:9054813:G:A	rs75941192	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr17	9225819	9225820	chr17:9225820:C:T	rs72814107	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr17	9358798	9358799	chr17:9358799:G:C	rs74897954	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr17	9918870	9918871	chr17:9918871:T:C	rs9895972	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.9039694350203575	4.04387299145961	CCTAATTAAG
chr17	9974163	9974164	chr17:9974164:A:G	rs7208058	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	10086296	10086297	chr17:10086297:G:A	rs546839992	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	10183026	10183027	chr17:10183027:G:C	rs11656779	G	C	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr17	10658069	10658070	chr17:10658070:T:C	rs78304742	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	10749006	10749007	chr17:10749007:C:T	rs4792025	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	10898646	10898647	chr17:10898647:T:C	rs12452528	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr17	11737214	11737215	chr17:11737215:C:A	rs149327008	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.507524508082175	5.96053530915724	AGTCATTAGC
chr17	12666008	12666009	chr17:12666009:G:C	rs565175231	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	13366746	13366747	chr17:13366747:A:G	rs8081985	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr17	13366747	13366748	chr17:13366748:A:C	rs8081986	A	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr17	13413393	13413394	chr17:13413394:A:T	rs11869436	A	T	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr17	14204088	14204089	chr17:14204089:C:T	rs186873480	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	15175502	15175503	chr17:15175503:A:T	rs4636946	A	T	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr17	15648556	15648557	chr17:15648557:G:T	rs3785635	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	16654223	16654224	chr17:16654224:T:C	rs556852639	T	C	.	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	16821580	16821581	chr17:16821581:T:C	rs3865306	T	C	.	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	16965246	16965247	chr17:16965247:C:T	rs7226097	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr17	17331325	17331326	chr17:17331326:G:A	rs56383549	G	A	-	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	17783879	17783880	chr17:17783880:A:G	rs545743385	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.685552352237077	3.8254559086763305	CGCAATTAAC
chr17	17930804	17930805	chr17:17930805:A:G	rs8068820	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.282386281486299	7.214270460494872	ACTAATTAGG
chr17	18008696	18008697	chr17:18008697:A:T	rs9897761	A	T	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	18497151	18497152	chr17:18497152:C:G	rs11654089	C	G	.	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	18571551	18571552	chr17:18571552:G:T	rs146866501	G	T	-	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	18894023	18894024	chr17:18894024:A:G	rs67411574	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.4444757986496235	0.603918574230964	ACTAATTAGC
chr17	18963547	18963548	chr17:18963548:G:T	rs73306439	G	T	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	19246415	19246416	chr17:19246416:C:G	rs564174357	C	G	c	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	19286297	19286298	chr17:19286298:T:G	rs4924972	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.525620950492726	5.2100132140218856	CCCAATTAAC
chr17	20082727	20082728	chr17:20082728:T:C	rs7210439	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	20689434	20689435	chr17:20689435:T:C	rs7211005	T	C	.	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	20689448	20689449	chr17:20689449:T:G	rs115132636	T	G	.	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	20889682	20889683	chr17:20889683:T:C	rs191342133	T	C	.	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr17	21400835	21400836	chr17:21400836:T:C	rs4622568	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	21424009	21424010	chr17:21424010:C:G	rs55700643	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr17	22145034	22145035	chr17:22145035:G:C	rs78749050	G	C	.	Hoxd3.mouse_homeodomain_1	9	1	-	7.435275621829636	7.273186104666311	GCTAATTAAC
chr17	22145053	22145054	chr17:22145054:A:G	rs77846327	A	G	.	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	26782411	26782412	chr17:26782412:G:A	rs1198556102	G	A	N	Hoxd3.mouse_homeodomain_1	8	1	+	6.304615789157963	6.363531433329402	CCCAATTAGG
chr17	27378726	27378727	chr17:27378727:C:T	rs322185	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr17	27644200	27644201	chr17:27644201:T:C	rs9944514	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr17	27671923	27671924	chr17:27671924:A:G	rs4525544	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.507524508082175	6.439408687090748	AGTCATTAGC
chr17	27751785	27751786	chr17:27751786:C:T	rs73265277	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr17	27985441	27985442	chr17:27985442:A:G	rs4239213	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	28501219	28501220	chr17:28501220:C:T	rs117004690	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	28837747	28837748	chr17:28837748:A:C	rs117046600	A	C	a	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	28925970	28925971	chr17:28925971:C:T	rs11652544	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	29376330	29376331	chr17:29376331:C:T	rs2138852	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	29996480	29996481	chr17:29996481:A:G	rs12944395	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.8337638605482685	2.677204459211658	GGCAATTAGG
chr17	30095499	30095500	chr17:30095500:C:T	rs28368875	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr17	30541987	30541988	chr17:30541988:A:T	rs140395466	A	T	a	Hoxd3.mouse_homeodomain_1	6	1	-	5.736881168236468	2.916294774451194	GGCCATTAGG
chr17	30542007	30542008	chr17:30542008:G:A	rs185661695	G	A	g	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	30667433	30667434	chr17:30667434:G:C	rs145952101	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr17	31390408	31390409	chr17:31390409:G:A	rs113297709	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr17	31549107	31549108	chr17:31549108:C:A	rs58704071	C	A	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	31717086	31717087	chr17:31717087:C:G	rs9903688	C	G	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr17	31721769	31721770	chr17:31721770:T:G	rs34758445	T	G	G	Hoxd3.mouse_homeodomain_1	6	1	+	6.277319169927424	4.961711433456582	GGTCATTAGG
chr17	31896384	31896385	chr17:31896385:C:T	rs79389425	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr17	32106762	32106763	chr17:32106763:G:A	rs556662564	G	A	.	Hoxd3.mouse_homeodomain_1	8	1	-	7.2190107174197315	6.8692371677198025	AGTAATTACC
chr17	32154944	32154945	chr17:32154945:G:A	rs72825788	G	A	g	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr17	32299427	32299428	chr17:32299428:C:T	rs115380807	C	T	c	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr17	32356666	32356667	chr17:32356667:C:T	rs147609189	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr17	32936220	32936221	chr17:32936221:T:A	rs192406760	T	A	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	32936221	32936222	chr17:32936222:G:A	rs185001342	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr17	33041413	33041414	chr17:33041414:T:C	rs77997139	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	33277670	33277671	chr17:33277671:A:G	rs1391084	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.536291379402548	6.995853377711593	GGTAATTAGC
chr17	33446434	33446435	chr17:33446435:A:G	rs12602581	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	5.898970685399792	3.0388742418390455	GGCCATTAGC
chr17	33872846	33872847	chr17:33872847:G:A	rs928773792	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr17	33874045	33874046	chr17:33874046:C:T	rs378448	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	34011716	34011717	chr17:34011717:A:C	rs56406346	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	34252960	34252961	chr17:34252961:T:C	rs3917884	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	34382946	34382947	chr17:34382947:C:T	rs16969605	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	34670980	34670981	chr17:34670981:T:G	rs4795019	T	G	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	34670982	34670983	chr17:34670983:G:A	rs6416978	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	34686493	34686494	chr17:34686494:A:T	rs4795969	A	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr17	34736655	34736656	chr17:34736656:A:G	rs12941768	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr17	34877531	34877532	chr17:34877532:C:G	rs1482100	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.8337638605482685	6.464547190902314	GGCAATTAGG
chr17	35166656	35166657	chr17:35166657:G:C	rs9893213	G	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	35341361	35341362	chr17:35341362:A:C	rs117127726	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	35808246	35808247	chr17:35808247:T:C	rs4251704	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.741948279795344	6.6738324588039175	ACCAATTAGG
chr17	35976246	35976247	chr17:35976247:C:T	rs76570261	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.433117506410662	6.765396739707261	GGTAATTAAG
chr17	35976275	35976276	chr17:35976276:T:C	rs80329614	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	36507270	36507271	chr17:36507271:T:C	rs8081787	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	36716707	36716708	chr17:36716708:G:A	rs11263789	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr17	36722291	36722292	chr17:36722292:A:G	rs779308850	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	36910436	36910437	chr17:36910437:C:T	rs11651044	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr17	37198944	37198945	chr17:37198945:A:C	rs145435380	A	C	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	37236556	37236557	chr17:37236557:G:C	rs2542650	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	37438517	37438518	chr17:37438518:A:G	rs78954689	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	37845413	37845414	chr17:37845414:A:C	rs12935969	A	C	a	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	39209299	39209300	chr17:39209300:T:C	rs71369729	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	39601918	39601919	chr17:39601919:G:A	rs66481362	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	40219878	40219879	chr17:40219879:C:T	chr17:40219879:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	40351421	40351422	chr17:40351422:C:T	rs561057507	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	40388371	40388372	chr17:40388372:G:A	rs2715555	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.9039694350203575	6.744161933178267	CCTAATTAAG
chr17	40471677	40471678	chr17:40471678:G:A	rs181362792	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr17	40833065	40833066	chr17:40833066:A:C	rs2428555	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	40994336	40994337	chr17:40994337:G:A	rs2010385	G	A	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr17	41317678	41317679	chr17:41317679:T:C	rs117607781	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	41667794	41667795	chr17:41667795:T:C	rs74376817	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.901879681539695	4.0689287303699935	AGCAATTAGG
chr17	42098920	42098921	chr17:42098921:A:C	rs35490951	A	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr17	42156688	42156689	chr17:42156689:T:C	rs57741166	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.341301925657738	0.5007447012390781	ACTAATTAAG
chr17	42248393	42248394	chr17:42248394:C:T	rs16967609	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	42422262	42422263	chr17:42422263:A:G	rs7224135	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	42467984	42467985	chr17:42467985:G:A	chr17:42467985:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr17	42548827	42548828	chr17:42548828:C:G	rs145141705	C	G	c	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr17	42555011	42555012	chr17:42555012:C:T	rs2229233	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	42651645	42651646	chr17:42651646:A:G	chr17:42651646:A:G	A	G	a	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr17	43411349	43411350	chr17:43411350:C:T	rs72831101	C	T	t	Hoxd3.mouse_homeodomain_1	1	1	-	7.30929062122411	6.64156985452071	AGTAATTAGT
chr17	43444155	43444156	chr17:43444156:A:G	rs62080675	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	43707034	43707035	chr17:43707035:C:T	rs118114662	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	43762860	43762861	chr17:43762861:T:C	rs4792910	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.277319169927424	3.4172227263666755	GGTCATTAGG
chr17	44103067	44103068	chr17:44103068:G:A	rs609292	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr17	44166402	44166403	chr17:44166403:C:T	rs2040810	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	44955856	44955857	chr17:44955857:G:A	rs8073976	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	44968492	44968493	chr17:44968493:G:A	rs907502158	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	45161239	45161240	chr17:45161240:A:C	rs555865185	A	C	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	45200856	45200857	chr17:45200857:C:T	rs8069208	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr17	45223159	45223160	chr17:45223160:C:T	rs73319093	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.700736798541729	6.768852619533155	GGCAATTAGT
chr17	45385860	45385861	chr17:45385861:C:T	rs140382437	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr17	45590469	45590470	chr17:45590470:C:A	rs62064418	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	45640525	45640526	chr17:45640526:A:G	rs1181442387	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr17	45666977	45666978	chr17:45666978:T:A	rs1635298	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.304615789157963	3.4840293953726893	CCCAATTAGG
chr17	45714959	45714960	chr17:45714960:C:T	rs56220242	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.6738324588039175	6.732748102975356	GCCAATTAGG
chr17	45730954	45730955	chr17:45730955:G:A	rs62054389	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	45825138	45825139	chr17:45825139:C:T	rs4341787	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.9039694350203575	6.744161933178267	CCTAATTAAG
chr17	45825155	45825156	chr17:45825156:G:A	rs4523962	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr17	45846763	45846764	chr17:45846764:G:A	rs12373139	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	45861267	45861268	chr17:45861268:A:G	rs62054846	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.8337638605482685	3.9736674169875204	GGCAATTAGG
chr17	46175836	46175837	chr17:46175837:A:C	rs2532261	A	C	C	Hoxd3.mouse_homeodomain_1	2	1	-	7.30929062122411	3.4021955631231764	AGTAATTAGT
chr17	46256045	46256046	chr17:46256046:G:A	rs111920741	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.004985192593269	6.3372644258898685	CGTAATTAGG
chr17	46809586	46809587	chr17:46809587:T:C	rs11653738	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr17	46894908	46894909	chr17:46894909:A:G	rs197927	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	46894934	46894935	chr17:46894935:G:A	rs114374236	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	46929840	46929841	chr17:46929841:C:G	rs75921757	C	G	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr17	46929846	46929847	chr17:46929847:A:G	rs2072317	A	G	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr17	46984682	46984683	chr17:46984683:T:A	rs35246578	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr17	47059825	47059826	chr17:47059826:G:A	rs11649831	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr17	47179455	47179456	chr17:47179456:G:A	rs954344	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	47305470	47305471	chr17:47305471:C:T	rs3744452	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr17	47687882	47687883	chr17:47687883:T:C	rs6503796	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	5.736881168236468	-1.103676056182192	GGCCATTAGG
chr17	47822097	47822098	chr17:47822098:A:C	rs1049828628	A	C	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.066058952183682	6.6217468250380005	CCTAATTAAC
chr17	48029858	48029859	chr17:48029859:T:C	rs115217454	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr17	48254131	48254132	chr17:48254132:C:T	rs9910351	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	48378477	48378478	chr17:48378478:A:C	rs28482329	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr17	48551869	48551870	chr17:48551870:G:A	rs890432	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	48752668	48752669	chr17:48752669:T:G	rs6504544	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	6.220683642931706	2.3801844663796388	GGTAATGAGC
chr17	48915760	48915761	chr17:48915761:G:A	rs140133861	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr17	48915791	48915792	chr17:48915792:T:C	chr17:48915792:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	49134295	49134296	chr17:49134296:C:G	rs12452190	C	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	49329979	49329980	chr17:49329980:T:A	rs9891264	T	A	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	49470293	49470294	chr17:49470294:T:C	rs753683150	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	49708427	49708428	chr17:49708428:C:T	chr17:49708428:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.220683642931706	6.279599287103145	GGTAATGAGC
chr17	49708438	49708439	chr17:49708439:G:T	rs115656145	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	49908832	49908833	chr17:49908833:G:A	rs271681	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.9888053792649805	6.6390318295650514	GGTAATTACG
chr17	50326464	50326465	chr17:50326465:T:C	rs8068961	T	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr17	51439862	51439863	chr17:51439863:C:T	rs1014129	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	51648847	51648848	chr17:51648848:G:A	rs2073864	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.288435975829675	5.938662426129746	GCCAATTACG
chr17	51675220	51675221	chr17:51675221:T:C	rs16950359	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr17	53261852	53261853	chr17:53261853:G:T	rs983203605	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	53261885	53261886	chr17:53261886:C:T	rs9303614	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr17	53635723	53635724	chr17:53635724:A:G	rs6504841	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr17	53802979	53802980	chr17:53802980:T:C	rs9916689	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.9039694350203575	4.04387299145961	CCTAATTAAG
chr17	54694569	54694570	chr17:54694570:C:T	rs12449886	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.30929062122411	7.368206265395549	AGTAATTAGT
chr17	54864992	54864993	chr17:54864993:T:A	rs79327757	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	55286995	55286996	chr17:55286996:T:A	rs58075230	T	A	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	55466934	55466935	chr17:55466935:C:G	rs371024515	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	55533529	55533530	chr17:55533530:G:A	rs8082684	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	55603676	55603677	chr17:55603677:G:T	rs1506590	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr17	55806979	55806980	chr17:55806980:C:A	rs117594507	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	56153555	56153556	chr17:56153556:C:A	rs9906210	C	A	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr17	56653999	56654000	chr17:56654000:G:A	rs7216933	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	56933317	56933318	chr17:56933318:A:C	rs151043463	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.892679504719707	5.5770717682488655	GGCAATTAAG
chr17	56966645	56966646	chr17:56966646:G:A	rs732646	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	57086575	57086576	chr17:57086576:C:A	rs767178679	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	57109776	57109777	chr17:57109777:T:G	chr17:57109777:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	57258793	57258794	chr17:57258794:G:A	rs8071182	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	57294796	57294797	chr17:57294797:G:A	rs11657906	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.536291379402548	7.595207023573987	GGTAATTAGC
chr17	57461323	57461324	chr17:57461324:C:T	rs76954717	C	T	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr17	57762999	57763000	chr17:57763000:G:A	rs12449630	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	58379735	58379736	chr17:58379736:C:G	rs757484	C	G	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr17	58987309	58987310	chr17:58987310:G:A	rs114134723	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr17	59367549	59367550	chr17:59367550:C:A	rs67941865	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.304615789157963	5.796826424198914	CCCAATTAGG
chr17	59423710	59423711	chr17:59423711:A:G	rs16943529	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.304615789157963	3.444519345597216	CCCAATTAGG
chr17	59754240	59754241	chr17:59754241:A:G	rs148052227	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	59963977	59963978	chr17:59963978:C:G	rs59767604	C	G	c	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	60173574	60173575	chr17:60173575:C:T	rs16944117	C	T	-	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr17	60351108	60351109	chr17:60351109:C:T	rs1289106099	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.518641313984426	5.994501892414615	ACCAATTACC
chr17	60356971	60356972	chr17:60356972:T:C	rs956727742	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	60390716	60390717	chr17:60390717:G:A	rs73322612	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	60415329	60415330	chr17:60415330:G:A	rs8068802	G	A	g	Hoxd3.mouse_homeodomain_1	0	1	-	6.525620950492726	6.365813448650636	CCCAATTAAC
chr17	61314770	61314771	chr17:61314771:C:T	chr17:61314771:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr17	61411394	61411395	chr17:61411395:A:C	rs962978021	A	C	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr17	61414022	61414023	chr17:61414023:A:G	rs9892365	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr17	61495645	61495646	chr17:61495646:T:C	rs77544277	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr17	62640319	62640320	chr17:62640320:T:C	rs2429396	T	C	c	Hoxd3.mouse_homeodomain_1	4	1	-	6.962953441130107	4.10285699756936	ACCAATTAAC
chr17	62767413	62767414	chr17:62767414:C:G	rs17684769	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr17	62902682	62902683	chr17:62902683:G:A	rs11653431	G	A	g	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	63744862	63744863	chr17:63744863:T:G	rs8069969	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr17	64145717	64145718	chr17:64145718:G:A	rs372370501	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	64145739	64145740	chr17:64145740:T:C	rs572681248	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	64145754	64145755	chr17:64145755:T:C	rs564829667	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	64174637	64174638	chr17:64174638:T:C	rs903286	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	64230946	64230947	chr17:64230947:T:C	rs117646490	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr17	64309850	64309851	chr17:64309851:A:G	rs1867625	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	64329333	64329334	chr17:64329334:A:T	rs2070784	A	T	T	Hoxd3.mouse_homeodomain_1	9	1	+	6.989302180477614	7.241174800232684	GGTAATTAGA
chr17	64706833	64706834	chr17:64706834:C:A	rs763190086	C	A	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr17	64837693	64837694	chr17:64837694:C:T	rs189661883	C	T	.	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	65100733	65100734	chr17:65100734:T:G	rs1424714230	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr17	65100741	65100742	chr17:65100742:C:A	rs1011520776	C	A	c	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr17	65100749	65100750	chr17:65100750:G:A	rs375765600	G	A	g	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr17	65293860	65293861	chr17:65293861:G:A	rs12451981	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr17	65389807	65389808	chr17:65389808:C:T	rs77657763	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	65468347	65468348	chr17:65468348:G:A	rs375369840	G	A	-	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	66193376	66193377	chr17:66193377:C:T	rs72837176	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr17	66381900	66381901	chr17:66381901:G:A	rs16959096	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr17	66445433	66445434	chr17:66445434:C:T	rs78443663	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr17	66567213	66567214	chr17:66567214:T:C	rs375603582	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.300090444404122	4.467139493234421	GGTAATTAAT
chr17	66855336	66855337	chr17:66855337:C:G	rs7208882	C	G	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	67517046	67517047	chr17:67517047:C:T	rs4791285	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr17	67700520	67700521	chr17:67700521:C:A	rs4791241	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr17	67700535	67700536	chr17:67700536:T:G	rs555642371	T	G	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr17	68036334	68036335	chr17:68036335:C:G	rs138943406	C	G	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	68054607	68054608	chr17:68054608:C:T	rs139584626	C	T	c	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	68181959	68181960	chr17:68181960:C:T	rs35121941	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	68206892	68206893	chr17:68206893:T:C	rs35744229	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	68383220	68383221	chr17:68383221:T:A	rs151096768	T	A	t	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	4.614194387079938	ACCAATTAGG
chr17	68695303	68695304	chr17:68695304:C:A	chr17:68695304:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr17	68705648	68705649	chr17:68705649:A:G	rs11869735	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr17	68955014	68955015	chr17:68955015:T:C	rs4147944	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	69246904	69246905	chr17:69246905:A:G	rs192547685	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	69897013	69897014	chr17:69897014:T:G	rs144999181	T	G	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	70040786	70040787	chr17:70040787:T:G	rs180169	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	71172151	71172152	chr17:71172152:C:T	rs4793534	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr17	71182763	71182764	chr17:71182764:A:C	rs16976443	A	C	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	71204092	71204093	chr17:71204093:T:G	rs141860412	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr17	71464540	71464541	chr17:71464541:C:A	rs7219759	C	A	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	72151147	72151148	chr17:72151148:C:G	rs118049199	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	72151155	72151156	chr17:72151156:G:A	chr17:72151156:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	72151157	72151158	chr17:72151158:T:G	rs901182055	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	72382857	72382858	chr17:72382858:A:G	rs191950559	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	72413283	72413284	chr17:72413284:G:A	rs34157436	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	72515466	72515467	chr17:72515467:G:A	rs147783122	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr17	72515480	72515481	chr17:72515481:G:C	rs115161381	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.450525492992999	6.835921975967242	GCCAATTACC
chr17	73095080	73095081	chr17:73095081:G:A	rs11656509	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr17	73360361	73360362	chr17:73360362:G:A	rs572442859	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr17	73411102	73411103	chr17:73411103:G:A	rs11650320	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr17	73757393	73757394	chr17:73757394:C:T	rs147093921	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr17	73794943	73794944	chr17:73794944:C:G	rs9910872	C	G	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	73902262	73902263	chr17:73902263:G:A	rs1049448988	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr17	74031261	74031262	chr17:74031262:T:C	rs1531237	T	C	t	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	74041104	74041105	chr17:74041105:A:G	rs7405699	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr17	74051494	74051495	chr17:74051495:C:T	rs145716013	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr17	74164858	74164859	chr17:74164859:T:G	rs79879738	T	G	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.901879681539695	4.452724211264842	AGCAATTAGG
chr17	74194911	74194912	chr17:74194912:G:C	rs78176099	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr17	74306568	74306569	chr17:74306569:G:A	rs530222468	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	74386777	74386778	chr17:74386778:C:A	rs16978020	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.433117506410662	6.7490466830965	GGTAATTAAG
chr17	74391471	74391472	chr17:74391472:T:C	rs72852264	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr17	74431447	74431448	chr17:74431448:C:G	rs3803789	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	75351031	75351032	chr17:75351032:G:C	rs55805625	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr17	75352119	75352120	chr17:75352120:G:A	rs56165635	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr17	75594354	75594355	chr17:75594355:A:G	rs820254	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	75809230	75809231	chr17:75809231:G:T	rs4318268	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	76383492	76383493	chr17:76383493:A:C	chr17:76383493:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	76416735	76416736	chr17:76416736:T:C	rs4550478	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	76416743	76416744	chr17:76416744:G:A	rs4462625	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.277319169927424	5.609598403224022	GGTCATTAGG
chr17	76523574	76523575	chr17:76523575:G:T	rs67556623	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr17	76745943	76745944	chr17:76745944:G:A	rs144128155	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr17	76745963	76745964	chr17:76745964:G:C	rs140580364	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.507524508082175	6.34543499091885	AGTCATTAGC
chr17	77132682	77132683	chr17:77132683:C:T	rs76363230	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr17	77221983	77221984	chr17:77221984:C:G	rs606090	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr17	77321093	77321094	chr17:77321094:C:G	rs73371416	C	G	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	77321132	77321133	chr17:77321133:G:A	rs577143273	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr17	77460417	77460418	chr17:77460418:G:A	rs312842	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr17	77493514	77493515	chr17:77493515:G:C	rs762161742	G	C	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	77571204	77571205	chr17:77571205:C:T	rs941059508	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.685552352237077	6.525744850394987	CGCAATTAAC
chr17	77699268	77699269	chr17:77699269:G:A	rs9891526	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr17	77716843	77716844	chr17:77716844:C:A	rs10852786	C	A	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	77787195	77787196	chr17:77787196:T:C	rs12602889	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	77935068	77935069	chr17:77935069:A:C	rs76510087	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	77942585	77942586	chr17:77942586:C:T	rs137940059	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr17	78325026	78325027	chr17:78325027:C:T	rs72894765	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	78325031	78325032	chr17:78325032:A:G	rs994597951	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	78417394	78417395	chr17:78417395:C:T	rs72921252	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr17	78538543	78538544	chr17:78538544:G:A	rs61345070	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr17	78637675	78637676	chr17:78637676:G:A	rs117947723	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	78775268	78775269	chr17:78775269:G:T	rs977791489	G	T	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	78776205	78776206	chr17:78776206:C:T	rs7224711	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	79299691	79299692	chr17:79299692:T:C	rs8082640	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr17	79596566	79596567	chr17:79596567:G:T	rs9906644	G	T	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	79647524	79647525	chr17:79647525:T:C	rs929952126	T	C	t	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr17	79852709	79852710	chr17:79852710:A:G	rs1663223	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr17	79978334	79978335	chr17:79978335:G:A	rs1468911446	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.214270460494872	7.273186104666311	GCTAATTAGG
chr17	80047237	80047238	chr17:80047238:A:G	rs7207441	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr17	80063928	80063929	chr17:80063929:T:C	rs34865586	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	80140580	80140581	chr17:80140581:C:T	rs12450753	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr17	80687145	80687146	chr17:80687146:T:A	rs7501544	T	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	80909152	80909153	chr17:80909153:G:A	rs1468031	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr17	80909171	80909172	chr17:80909172:A:C	rs6565488	A	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr17	81036808	81036809	chr17:81036809:A:T	rs28585511	A	T	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	81239234	81239235	chr17:81239235:A:G	rs965351413	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	81579682	81579683	chr17:81579683:C:G	rs62073414	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	81659752	81659753	chr17:81659753:C:T	rs62080197	C	T	c	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr17	81664010	81664011	chr17:81664011:C:T	rs57304625	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr17	81664043	81664044	chr17:81664044:C:T	rs72858833	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	82159601	82159602	chr17:82159602:C:A	rs8078102	C	A	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	82451415	82451416	chr17:82451416:A:G	rs577997763	A	G	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.435275621829636	7.376359977658197	GCTAATTAAC
chr17	82559512	82559513	chr17:82559513:C:T	rs191998042	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	82559543	82559544	chr17:82559544:G:T	rs78610922	G	T	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr17	82574239	82574240	chr17:82574240:T:C	rs11653286	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	82574245	82574246	chr17:82574246:G:C	rs72862366	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	82613860	82613861	chr17:82613861:A:C	rs77505618	A	C	a	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	82613898	82613899	chr17:82613899:C:T	rs116790276	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr17	82780457	82780458	chr17:82780458:C:A	rs74000079	C	A	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	82911898	82911899	chr17:82911899:T:C	rs12600371	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr17	83106372	83106373	chr17:83106373:G:A	rs28626243	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr17	83200184	83200185	chr17:83200185:C:T	rs944633201	C	T	c	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr18	250046	250047	chr18:250047:T:C	rs577454	T	C	a	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr18	250057	250058	chr18:250058:A:G	rs598617	A	G	a	Hoxd3.mouse_homeodomain_1	2	1	-	7.536291379402548	6.995853377711593	GGTAATTAGC
chr18	384796	384797	chr18:384797:G:T	rs7244310	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	471808	471809	chr18:471809:G:A	rs1954816	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	7.30929062122411	6.64156985452071	AGTAATTAGT
chr18	476874	476875	chr18:476875:G:A	rs28418336	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr18	832276	832277	chr18:832277:G:A	rs144088749	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr18	1826436	1826437	chr18:1826437:T:G	rs893657	T	G	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	1965689	1965690	chr18:1965690:C:T	rs73377716	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr18	2453913	2453914	chr18:2453914:A:G	rs73936231	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	2637960	2637961	chr18:2637961:G:T	rs9962654	G	T	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	3175381	3175382	chr18:3175382:C:G	rs11877597	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.845053790848919	7.004985192593269	CCTAATTAGG
chr18	3180693	3180694	chr18:3180694:G:A	rs78251163	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr18	3180710	3180711	chr18:3180711:C:T	rs7238703	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.279477285346397	6.338392929517836	GCTCATTAGC
chr18	3261938	3261939	chr18:3261939:C:A	rs113350965	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	3625651	3625652	chr18:3625652:G:A	rs79740357	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	3653873	3653874	chr18:3653874:A:C	rs117841850	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	3742712	3742713	chr18:3742713:C:A	rs11873533	C	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	3943789	3943790	chr18:3943790:G:A	rs28468980	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr18	4842353	4842354	chr18:4842354:C:G	rs9303970	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.0639691987030195	6.904037796958669	AGCAATTAGC
chr18	5238408	5238409	chr18:5238409:G:A	rs1295882365	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.273186104666311	6.7490466830965	GCTAATTAAG
chr18	5238412	5238413	chr18:5238413:C:A	rs9627	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	5294738	5294739	chr18:5294739:C:T	rs190669762	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	5466375	5466376	chr18:5466376:T:A	rs151082001	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	6050434	6050435	chr18:6050435:G:C	rs4308034	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr18	6598450	6598451	chr18:6598451:C:G	rs73391472	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	6730946	6730947	chr18:6730947:T:C	rs4078165	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	7361843	7361844	chr18:7361844:T:C	rs6506499	T	C	c	Hoxd3.mouse_homeodomain_1	6	1	+	6.904037796958669	4.071086845788967	ACCAATTAGC
chr18	8006150	8006151	chr18:8006151:T:C	rs80176473	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	8087896	8087897	chr18:8087897:G:A	rs77172127	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr18	8836198	8836199	chr18:8836199:T:G	rs12962546	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr18	8843308	8843309	chr18:8843309:T:A	rs11875143	T	A	A	Hoxd3.mouse_homeodomain_1	6	1	+	7.2190107174197315	4.398424323634457	AGTAATTACC
chr18	9061635	9061636	chr18:9061636:C:T	rs75274372	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr18	9404720	9404721	chr18:9404721:G:A	rs61067716	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr18	9404747	9404748	chr18:9404748:C:G	rs12963151	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	9438608	9438609	chr18:9438609:T:C	rs8089473	T	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	9629967	9629968	chr18:9629968:A:G	rs28444237	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	9652344	9652345	chr18:9652345:C:T	rs7243701	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	9710356	9710357	chr18:9710357:A:G	rs567206116	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.835921975967242	3.9758255324064944	GCCAATTAGC
chr18	9831050	9831051	chr18:9831051:T:C	rs11659552	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr18	9971776	9971777	chr18:9971777:G:T	rs29180	G	T	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr18	9971792	9971793	chr18:9971793:A:C	rs29073	A	C	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.007267207914503	3.1001721498135693	TGTAATTAGC
chr18	10042746	10042747	chr18:10042747:A:T	rs631448	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	10148694	10148695	chr18:10148695:T:C	rs146127622	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr18	10148724	10148725	chr18:10148725:G:C	rs1893211	G	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	10476151	10476152	chr18:10476152:A:C	rs1786683	A	C	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr18	11309348	11309349	chr18:11309349:G:A	rs7236214	G	A	g	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr18	11309388	11309389	chr18:11309389:A:C	rs180879682	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	12552632	12552633	chr18:12552633:A:T	rs12961966	A	T	a	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	12618422	12618423	chr18:12618423:C:T	rs9964759	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.300090444404122	7.368206265395549	GGTAATTAAT
chr18	13180058	13180059	chr18:13180059:G:A	rs12957953	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	13584928	13584929	chr18:13584929:G:A	rs111485469	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	13672888	13672889	chr18:13672889:T:C	rs1786556	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr18	13835441	13835442	chr18:13835442:G:T	rs28378884	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.741948279795344	4.938914338831571	ACCAATTAGG
chr18	13886875	13886876	chr18:13886876:G:A	rs28926172	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr18	22322575	22322576	chr18:22322576:T:C	chr18:22322576:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr18	23155496	23155497	chr18:23155497:T:G	rs4308051	T	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr18	23886350	23886351	chr18:23886351:T:G	rs9955681	T	G	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.214270460494872	4.214884500532408	GCTAATTAGG
chr18	23949757	23949758	chr18:23949758:G:A	rs2241643	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr18	24554188	24554189	chr18:24554189:G:A	rs12604956	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	24662251	24662252	chr18:24662252:T:C	rs967763	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr18	24673265	24673266	chr18:24673266:G:A	rs75551307	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr18	24868065	24868066	chr18:24868066:G:T	rs9675660	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.122884842874458	6.438814019560296	AGCAATTAAC
chr18	25168755	25168756	chr18:25168756:G:A	rs45579137	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr18	25549660	25549661	chr18:25549661:A:G	rs166655	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	25549672	25549673	chr18:25549673:A:G	rs17798998	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.304615789157963	3.444519345597216	CCCAATTAGG
chr18	25708063	25708064	chr18:25708064:A:G	rs117317476	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr18	26432834	26432835	chr18:26432835:A:G	rs68047832	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr18	26568679	26568680	chr18:26568680:A:G	rs4800742	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr18	26711965	26711966	chr18:26711966:C:T	rs1817000	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.063900836764708	6.396180070061307	CGTAATTAAG
chr18	27812523	27812524	chr18:27812524:G:A	rs76614487	G	A	g	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr18	27901753	27901754	chr18:27901754:A:G	rs12956039	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	-	7.007267207914503	7.167074709756593	TGTAATTAGC
chr18	28028132	28028133	chr18:28028133:T:C	rs505314	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.835921975967242	3.9758255324064944	GCCAATTAGC
chr18	28909220	28909221	chr18:28909221:G:A	rs145301617	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr18	28960537	28960538	chr18:28960538:T:C	rs74257857	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	28994896	28994897	chr18:28994897:C:A	rs4800900	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	29460250	29460251	chr18:29460251:A:C	rs1913667	A	C	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr18	29780962	29780963	chr18:29780963:C:T	rs3845203	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	29928560	29928561	chr18:29928561:T:G	rs4799340	T	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr18	30538574	30538575	chr18:30538575:A:G	rs1838024	A	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	30611094	30611095	chr18:30611095:G:T	rs193277805	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	30611132	30611133	chr18:30611133:T:C	rs11875113	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	30764264	30764265	chr18:30764265:A:G	rs142318779	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr18	31207391	31207392	chr18:31207392:T:A	rs1365295	T	A	A	Hoxd3.mouse_homeodomain_1	7	1	-	7.374201862239223	4.853591498885046	GGTAATTAGG
chr18	31929427	31929428	chr18:31929428:G:A	rs146221906	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	32549009	32549010	chr18:32549010:A:G	rs144778958	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr18	33446832	33446833	chr18:33446833:G:A	rs9955470	G	A	g	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr18	33829349	33829350	chr18:33829350:C:T	rs9945976	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr18	34115139	34115140	chr18:34115140:T:C	rs7233297	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	34624668	34624669	chr18:34624669:C:T	rs9973194	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	34976670	34976671	chr18:34976671:G:T	rs188353314	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.300090444404122	6.6160196210899604	GGTAATTAAT
chr18	35290050	35290051	chr18:35290051:A:G	rs2278464	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.341301925657738	5.352444023744556	ACTAATTAAG
chr18	35654107	35654108	chr18:35654108:T:C	rs17647532	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.300090444404122	0.45953321998546315	GGTAATTAAT
chr18	35680801	35680802	chr18:35680802:A:G	rs7244122	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.960795325711134	0.12023810129247414	AGCAATTAAG
chr18	36129327	36129328	chr18:36129328:G:A	rs7242529	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr18	36458250	36458251	chr18:36458251:G:A	rs17673809	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	37162662	37162663	chr18:37162663:C:T	rs323312	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr18	37384041	37384042	chr18:37384042:C:T	rs7242303	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr18	37499258	37499259	chr18:37499259:C:A	rs17750345	C	A	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	37499278	37499279	chr18:37499279:C:T	rs141179596	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr18	39260770	39260771	chr18:39260771:C:A	rs7240623	C	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr18	39359666	39359667	chr18:39359667:C:T	rs7233383	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr18	40296794	40296795	chr18:40296795:A:G	rs16973029	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr18	40403060	40403061	chr18:40403061:C:T	rs7407346	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	40603997	40603998	chr18:40603998:C:A	rs73949187	C	A	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	40607846	40607847	chr18:40607847:G:A	rs7232770	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	40712927	40712928	chr18:40712928:A:T	rs16973699	A	T	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	40933047	40933048	chr18:40933048:A:G	rs4890471	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr18	41755039	41755040	chr18:41755040:C:T	rs2082586	C	T	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	42586896	42586897	chr18:42586897:T:G	rs7229368	T	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.663322844565413	7.2190107174197315	AGTAATTAAC
chr18	42586897	42586898	chr18:42586898:T:G	rs79001050	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.663322844565413	3.8228236680133456	AGTAATTAAC
chr18	43794680	43794681	chr18:43794681:G:A	rs9952707	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	7.503391442821062	6.979252021251251	ACTAATTAAC
chr18	43919850	43919851	chr18:43919851:G:A	rs62104965	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr18	44046661	44046662	chr18:44046662:G:A	rs6507560	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr18	44051090	44051091	chr18:44051091:A:G	rs56263728	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr18	44051137	44051138	chr18:44051138:G:A	rs552565333	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	44385538	44385539	chr18:44385539:G:A	rs2219318	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr18	44548789	44548790	chr18:44548790:A:G	rs4988714	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	45469527	45469528	chr18:45469528:G:A	rs2852286	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr18	45512620	45512621	chr18:45512621:G:C	rs2362843	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr18	45656765	45656766	chr18:45656766:C:T	rs2035532	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.435275621829636	7.140159042659771	GCTAATTAAC
chr18	45683237	45683238	chr18:45683238:G:T	chr18:45683238:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr18	46286938	46286939	chr18:46286939:C:G	rs147609447	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr18	46313291	46313292	chr18:46313292:G:T	rs7237514	G	T	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	46416045	46416046	chr18:46416046:A:G	rs35897092	A	G	a	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	47409765	47409766	chr18:47409766:A:C	rs4539677	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	47409809	47409810	chr18:47409810:A:G	rs4594327	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr18	47507033	47507034	chr18:47507034:C:T	rs7234972	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	47701449	47701450	chr18:47701450:C:T	rs9957252	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	48048513	48048514	chr18:48048514:G:T	rs74953370	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	48100587	48100588	chr18:48100588:T:G	rs12458144	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr18	48186666	48186667	chr18:48186667:A:T	rs6507823	A	T	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	48293347	48293348	chr18:48293348:C:G	rs117233027	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	48531768	48531769	chr18:48531769:C:T	rs16949436	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr18	48552614	48552615	chr18:48552615:C:A	rs111440119	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	48656706	48656707	chr18:48656707:A:G	rs9646523	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	48828534	48828535	chr18:48828535:A:T	rs931477247	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.845053790848919	4.324443427494741	CCTAATTAGG
chr18	49603971	49603972	chr18:49603972:G:A	rs17712928	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	50140252	50140253	chr18:50140253:A:C	rs12607904	A	C	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	50288075	50288076	chr18:50288076:C:A	rs3819216	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.464547190902314	5.780476367588152	CGCAATTAGG
chr18	50288077	50288078	chr18:50288078:G:T	rs115391153	G	T	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	51195864	51195865	chr18:51195865:T:C	rs186916999	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.433117506410662	7.374201862239223	GGTAATTAAG
chr18	52403950	52403951	chr18:52403951:G:A	rs3862679	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.700736798541729	6.0330160318383275	GGCAATTAGT
chr18	52403969	52403970	chr18:52403970:C:A	rs3862680	C	A	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr18	52723511	52723512	chr18:52723512:C:A	rs4641847	C	A	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr18	54386499	54386500	chr18:54386500:C:G	rs6508293	C	G	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr18	55097954	55097955	chr18:55097955:T:C	rs368872152	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	55097977	55097978	chr18:55097978:A:C	rs1039644204	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	55100975	55100976	chr18:55100976:C:A	rs4539685	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr18	55441970	55441971	chr18:55441971:C:T	rs10503002	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr18	55585931	55585932	chr18:55585932:G:T	rs191615744	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.741948279795344	4.938914338831571	ACCAATTAGG
chr18	55916843	55916844	chr18:55916844:A:G	rs12970068	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr18	56911250	56911251	chr18:56911251:C:T	rs10048404	C	T	c	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	57533906	57533907	chr18:57533907:A:C	rs73453604	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.0639691987030195	4.6148137284281665	AGCAATTAGC
chr18	57533911	57533912	chr18:57533912:C:A	rs149020626	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.0639691987030195	6.516979999778085	AGCAATTAGC
chr18	57959567	57959568	chr18:57959568:A:G	rs9953076	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr18	58227683	58227684	chr18:58227684:T:A	rs192646442	T	A	t	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr18	58334307	58334308	chr18:58334308:C:G	rs12605506	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.277319169927424	5.908102500281469	GGTCATTAGG
chr18	58529918	58529919	chr18:58529919:T:A	rs116263445	T	A	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr18	58565486	58565487	chr18:58565487:A:T	rs12604778	A	T	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	58993190	58993191	chr18:58993191:A:G	rs118134323	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr18	58993192	58993193	chr18:58993193:G:A	rs58251839	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	59070554	59070555	chr18:59070555:G:A	rs7230169	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr18	59402339	59402340	chr18:59402340:T:G	rs148803879	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr18	59469307	59469308	chr18:59469308:T:C	rs895010	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	3.881851836234596	ACCAATTAGG
chr18	59520612	59520613	chr18:59520613:C:T	rs7236861	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	59549692	59549693	chr18:59549693:A:C	rs61316088	A	C	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	59549704	59549705	chr18:59549705:C:T	rs57764629	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	59689959	59689960	chr18:59689960:C:T	rs1429576	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	59701213	59701214	chr18:59701214:C:A	rs1652076	C	A	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.894837620138681	6.365813448650636	GCCAATTAAC
chr18	59721665	59721666	chr18:59721666:A:C	rs1612762	A	C	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr18	59899155	59899156	chr18:59899156:C:T	rs9957673	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr18	59899169	59899170	chr18:59899170:C:T	rs112020770	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	60019702	60019703	chr18:60019703:T:A	rs7226393	T	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	60019703	60019704	chr18:60019704:G:T	rs7239588	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	60783892	60783893	chr18:60783893:G:A	rs112953913	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr18	61400280	61400281	chr18:61400281:G:A	rs17068280	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.279477285346397	5.984360706176533	GCTCATTAGC
chr18	61471696	61471697	chr18:61471697:G:T	rs72993709	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	61471732	61471733	chr18:61471733:C:T	rs77481770	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr18	61676921	61676922	chr18:61676922:G:A	rs60740000	G	A	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	61908717	61908718	chr18:61908718:C:T	rs4940539	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	62423363	62423364	chr18:62423364:C:A	rs117875298	C	A	c	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	62444223	62444224	chr18:62444224:T:G	rs12458600	T	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	62486222	62486223	chr18:62486223:T:G	rs8095251	T	G	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	62495557	62495558	chr18:62495558:T:C	rs4941139	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr18	62633337	62633338	chr18:62633338:C:T	rs9946161	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	62633361	62633362	chr18:62633362:G:A	rs149115621	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr18	63002840	63002841	chr18:63002841:G:A	rs10871800	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	6.732748102975356	6.3478484212137465	GCCAATTAAG
chr18	63082803	63082804	chr18:63082804:A:G	rs112832701	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.741948279795344	6.6738324588039175	ACCAATTAGG
chr18	63257736	63257737	chr18:63257737:C:T	rs7226979	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr18	63346401	63346402	chr18:63346402:C:T	rs7231949	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	63882511	63882512	chr18:63882512:C:T	rs148361426	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr18	64135243	64135244	chr18:64135244:T:C	rs9950644	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	66571335	66571336	chr18:66571336:A:G	rs1943321	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr18	67068871	67068872	chr18:67068872:T:C	rs4299253	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr18	67074791	67074792	chr18:67074792:T:G	rs112650874	T	G	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	68084414	68084415	chr18:68084415:G:A	rs1518029	G	A	g	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr18	68104478	68104479	chr18:68104479:T:C	rs34274196	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	68275313	68275314	chr18:68275314:T:C	rs661459	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	68500681	68500682	chr18:68500682:A:G	rs11151446	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr18	68500707	68500708	chr18:68500708:A:G	rs11151447	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	68944248	68944249	chr18:68944249:G:A	rs12327360	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	69376516	69376517	chr18:69376517:G:C	rs1218458121	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr18	69568269	69568270	chr18:69568270:G:A	rs573794591	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr18	69616592	69616593	chr18:69616593:A:T	rs4405640	A	T	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	70523561	70523562	chr18:70523562:G:A	rs112214761	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr18	71301905	71301906	chr18:71301906:C:T	rs12604484	C	T	c	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	71462001	71462002	chr18:71462002:G:A	rs1037533	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	71844982	71844983	chr18:71844983:C:A	rs1394988	C	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	72181208	72181209	chr18:72181209:G:A	rs116723071	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	72207359	72207360	chr18:72207360:G:C	rs12607299	G	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr18	72556092	72556093	chr18:72556093:C:G	rs7227689	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	72632889	72632890	chr18:72632890:C:A	rs12964986	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	72943031	72943032	chr18:72943032:T:G	rs61396923	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr18	74559303	74559304	chr18:74559304:T:C	rs12607796	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	74635873	74635874	chr18:74635874:T:A	rs76653520	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	74790710	74790711	chr18:74790711:A:G	rs17832309	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	75049191	75049192	chr18:75049192:C:A	rs17177260	C	A	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr18	75055809	75055810	chr18:75055810:A:C	rs76924808	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr18	75156801	75156802	chr18:75156802:G:T	rs762651689	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	75186877	75186878	chr18:75186878:T:C	rs652450	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	75622695	75622696	chr18:75622696:G:A	rs7239403	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	75983978	75983979	chr18:75983979:G:A	rs17330266	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr18	76166737	76166738	chr18:76166738:C:T	rs34161223	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	76166755	76166756	chr18:76166756:G:A	rs34865241	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	76447265	76447266	chr18:76447266:A:G	rs690265	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr18	76466182	76466183	chr18:76466183:T:G	rs17355696	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	76514631	76514632	chr18:76514632:A:G	rs58302983	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr18	76582603	76582604	chr18:76582604:C:T	rs9966597	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	76582612	76582613	chr18:76582613:C:G	rs17563049	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	76741982	76741983	chr18:76741983:T:C	rs35943772	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.904037796958669	6.835921975967242	ACCAATTAGC
chr18	76794353	76794354	chr18:76794354:G:T	rs8087420	G	T	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	76920747	76920748	chr18:76920748:T:C	rs17060091	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr18	77063964	77063965	chr18:77063965:G:A	rs35710301	G	A	g	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	77221046	77221047	chr18:77221047:A:C	rs12964446	A	C	C	Hoxd3.mouse_homeodomain_1	4	1	+	6.901879681539695	4.452724211264842	AGCAATTAGG
chr18	77858015	77858016	chr18:77858016:A:G	rs9957034	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	78080254	78080255	chr18:78080255:G:A	rs11081649	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr18	78608136	78608137	chr18:78608137:C:T	rs564169061	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr18	78620020	78620021	chr18:78620021:C:A	rs2004351	C	A	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	78620026	78620027	chr18:78620027:T:A	rs2004350	T	A	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	78980014	78980015	chr18:78980015:G:T	rs544477663	G	T	-	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	78980114	78980115	chr18:78980115:C:A	chr18:78980115:C:A	C	A	-	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr18	79241941	79241942	chr18:79241942:A:G	rs1483161	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	79523223	79523224	chr18:79523224:G:A	rs541965665	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	79599295	79599296	chr18:79599296:C:T	rs529506487	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	79611302	79611303	chr18:79611303:T:A	rs566564	T	A	A	Hoxd3.mouse_homeodomain_1	6	1	+	7.376359977658197	4.555773583872923	GCTAATTAGC
chr18	79749874	79749875	chr18:79749875:A:G	rs567717	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr18	79862878	79862879	chr18:79862879:A:G	rs28735056	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr18	79913430	79913431	chr18:79913431:G:A	rs145116028	G	A	g	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr18	79925323	79925324	chr18:79925324:C:T	rs117668325	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.464547190902314	6.304739689060224	CGCAATTAGG
chr18	80055504	80055505	chr18:80055505:A:G	rs4416085	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	80124183	80124184	chr18:80124184:T:C	rs7407865	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr18	80171570	80171571	chr18:80171571:G:A	rs574719529	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr19	382772	382773	chr19:382773:T:G	rs75071006	T	G	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	382775	382776	chr19:382776:C:T	rs73489992	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	511452	511453	chr19:511453:A:G	rs3745924	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	1132346	1132347	chr19:1132347:G:A	rs61612228	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	1253102	1253103	chr19:1253103:G:A	rs563065460	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	1361579	1361580	chr19:1361580:A:G	rs1259794682	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	2002390	2002391	chr19:2002391:T:G	rs10413498	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr19	2002391	2002392	chr19:2002392:A:G	rs10407860	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr19	2238667	2238668	chr19:2238668:G:T	rs7253181	G	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr19	2494246	2494247	chr19:2494247:C:T	rs11084942	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	2533617	2533618	chr19:2533618:G:T	rs8111499	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	2923478	2923479	chr19:2923479:C:T	rs4807365	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	2962466	2962467	chr19:2962467:T:C	rs8100795	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr19	3046068	3046069	chr19:3046069:T:C	rs72973282	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.282386281486299	3.1258268801496887	ACTAATTAGG
chr19	3164899	3164900	chr19:3164900:G:C	rs1682805	G	C	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.466705306321288	3.1000482499113096	CCCAATTAGC
chr19	3505863	3505864	chr19:3505864:C:A	chr19:3505864:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	4007678	4007679	chr19:4007679:C:T	rs933320674	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	4007684	4007685	chr19:4007685:C:T	rs889185945	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	4296608	4296609	chr19:4296609:C:A	rs138655456	C	A	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr19	4341901	4341902	chr19:4341902:C:T	rs2386601	C	T	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr19	4432975	4432976	chr19:4432976:G:A	rs243372	G	A	a	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	4470613	4470614	chr19:4470614:C:T	rs10407114	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.8451776907511785	6.904093334922617	TGTAATTAGG
chr19	4478275	4478276	chr19:4478276:A:C	rs12609166	A	C	C	Hoxd3.mouse_homeodomain_1	6	1	-	6.466829206223548	5.151221469752707	TGCAATTAGC
chr19	4555773	4555774	chr19:4555774:A:G	rs10409783	A	G	g	Hoxd3.mouse_homeodomain_1	2	1	-	6.220683642931706	5.680245641240751	GGTAATGAGC
chr19	4640074	4640075	chr19:4640075:G:C	rs141541950	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr19	4640098	4640099	chr19:4640099:G:T	rs189975004	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	4728951	4728952	chr19:4728952:T:A	rs764271	T	A	a	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr19	4732154	4732155	chr19:4732155:T:G	rs7255851	T	G	g	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr19	4764413	4764414	chr19:4764414:C:T	chr19:4764414:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr19	4923045	4923046	chr19:4923046:G:A	rs2779162	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	5059348	5059349	chr19:5059349:T:C	rs2054519	T	C	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr19	5288863	5288864	chr19:5288864:C:T	rs17676218	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	5353306	5353307	chr19:5353307:T:A	rs10405017	T	A	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	5386955	5386956	chr19:5386956:G:A	rs67568348	G	A	g	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr19	5386971	5386972	chr19:5386972:G:A	rs66482878	G	A	a	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr19	5470398	5470399	chr19:5470399:C:G	rs671283	C	G	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr19	5908900	5908901	chr19:5908901:G:C	rs1477652777	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	6244833	6244834	chr19:6244834:C:T	rs4807070	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr19	6641692	6641693	chr19:6641693:C:G	rs409662	C	G	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	6663582	6663583	chr19:6663583:G:C	rs2279627	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	7102590	7102591	chr19:7102591:A:G	rs866461836	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	7103511	7103512	chr19:7103512:T:C	rs2914560	T	C	t	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr19	7248928	7248929	chr19:7248929:A:T	rs77163996	A	T	T	Hoxd3.mouse_homeodomain_1	7	1	+	7.273186104666311	4.752575741312134	GCTAATTAAG
chr19	7248933	7248934	chr19:7248934:T:C	rs10412476	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr19	7398851	7398852	chr19:7398852:G:A	rs144178389	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr19	7434555	7434556	chr19:7434556:A:G	rs78290157	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.847335806170153	6.306897804479197	TCTAATTAGC
chr19	7772856	7772857	chr19:7772857:T:G	rs621025	T	G	g	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr19	7800024	7800025	chr19:7800025:C:T	chr19:7800025:C:T	C	T	-	Hoxd3.mouse_homeodomain_1	9	1	+	7.225990353928032	6.930873774758168	CGTAATTAAC
chr19	7903385	7903386	chr19:7903386:G:C	rs7248776	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.433117506410662	7.063900836764708	GGTAATTAAG
chr19	8408106	8408107	chr19:8408107:C:T	rs28370965	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	8478828	8478829	chr19:8478829:C:T	rs11881002	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr19	8525729	8525730	chr19:8525730:C:T	rs145378255	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	8655119	8655120	chr19:8655120:C:A	rs62121177	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr19	8664886	8664887	chr19:8664887:C:T	rs12975127	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr19	9053037	9053038	chr19:9053038:C:G	rs12459695	C	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.540805396797378	6.155408913823135	GCCAATTAGT
chr19	9137147	9137148	chr19:9137148:T:C	rs62103608	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.007267207914503	2.8507078065778932	TGTAATTAGC
chr19	9323005	9323006	chr19:9323006:C:T	rs10412913	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr19	9722116	9722117	chr19:9722117:T:C	chr19:9722117:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.007267207914503	5.018409306001321	TGTAATTAGC
chr19	10008023	10008024	chr19:10008024:C:T	rs12971542	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.448864178786659	5.781143412083257	GGCAATTAGA
chr19	10555703	10555704	chr19:10555704:T:A	rs8113274	T	A	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	10745462	10745463	chr19:10745463:G:T	rs12232826	G	T	g	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr19	10856101	10856102	chr19:10856102:C:T	rs67987899	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr19	11710213	11710214	chr19:11710214:T:C	rs11085792	T	C	c	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	12064516	12064517	chr19:12064517:G:A	rs138735761	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr19	12172645	12172646	chr19:12172646:A:G	rs73002454	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	12913010	12913011	chr19:12913011:G:A	rs185506561	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr19	13460316	13460317	chr19:13460317:C:T	rs141862832	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.241240225091396	5.573519458387995	CGCAATTACC
chr19	13602556	13602557	chr19:13602557:A:T	rs6511882	A	T	t	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	13602558	13602559	chr19:13602559:C:A	rs6511883	C	A	a	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	13748500	13748501	chr19:13748501:C:G	rs182103896	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	14972982	14972983	chr19:14972983:C:T	rs8103212	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	15299850	15299851	chr19:15299851:G:C	rs192600628	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr19	15409724	15409725	chr19:15409725:G:A	rs12608834	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	15610983	15610984	chr19:15610984:C:T	rs8106355	C	T	c	Hoxd3.mouse_homeodomain_1	1	1	-	7.241174800232684	6.573454033529282	GGTAATTAGT
chr19	15631562	15631563	chr19:15631563:C:T	rs1022414	C	T	c	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr19	15828881	15828882	chr19:15828882:C:T	rs7259139	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr19	15835818	15835819	chr19:15835819:C:T	rs12982687	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	15835843	15835844	chr19:15835844:T:G	rs73927772	T	G	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr19	16002804	16002805	chr19:16002805:T:G	rs12609180	T	G	t	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	16074556	16074557	chr19:16074557:G:C	rs11672327	G	C	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr19	16162051	16162052	chr19:16162052:A:G	rs188167918	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr19	16185886	16185887	chr19:16185887:G:T	chr19:16185887:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr19	16185899	16185900	chr19:16185900:T:A	rs366657	T	A	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	16193930	16193931	chr19:16193931:T:C	rs432573	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	5.680245641240751	3.6913877393275696	GGCAATGAGC
chr19	16241948	16241949	chr19:16241949:C:T	rs12978151	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	16445173	16445174	chr19:16445174:G:A	rs10410427	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	16660078	16660079	chr19:16660079:A:C	rs1340385191	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.374201862239223	6.058594125768382	GGTAATTAGG
chr19	17415199	17415200	chr19:17415200:C:G	rs2364551	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	17791777	17791778	chr19:17791778:T:C	rs265547	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	17828034	17828035	chr19:17828035:C:G	rs7255931	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.220683642931706	5.835287159957463	GGTAATGAGC
chr19	18104258	18104259	chr19:18104259:G:A	rs75649504	G	A	G	Hoxd3.mouse_homeodomain_1	3	1	-	5.736881168236468	4.744266528717691	GGCCATTAGG
chr19	18104264	18104265	chr19:18104265:G:A	rs368847962	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	18262264	18262265	chr19:18262265:T:G	rs4808774	T	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr19	18417551	18417552	chr19:18417552:G:A	rs79557920	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.277319169927424	5.609598403224022	GGTCATTAGG
chr19	18831749	18831750	chr19:18831750:C:T	rs2238652	C	T	-	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	18831772	18831773	chr19:18831773:A:G	rs55824320	A	G	-	Hoxd3.mouse_homeodomain_1	3	1	+	6.466705306321288	4.477847404408106	CCCAATTAGC
chr19	18831773	18831774	chr19:18831774:A:G	rs1038423104	A	G	-	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr19	18993276	18993277	chr19:18993277:C:T	rs77733772	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.150894896428305	6.855778317258441	GGTAATTACC
chr19	19074420	19074421	chr19:19074421:G:A	rs75854698	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.894837620138681	6.5997210409688165	GCCAATTAAC
chr19	19250342	19250343	chr19:19250343:C:G	rs55989964	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	19635404	19635405	chr19:19635405:C:G	rs2304129	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr19	19764054	19764055	chr19:19764055:C:T	rs7247299	C	T	c	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr19	19943936	19943937	chr19:19943937:A:G	rs2215915	A	G	a	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr19	20130120	20130121	chr19:20130121:T:A	rs6511081	T	A	.	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr19	20365204	20365205	chr19:20365205:G:C	rs11669244	G	C	.	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr19	20372111	20372112	chr19:20372112:G:T	rs10410769	G	T	.	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	20533804	20533805	chr19:20533805:G:A	rs7256690	G	A	.	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr19	20666371	20666372	chr19:20666372:T:C	rs561483	T	C	.	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr19	20777375	20777376	chr19:20777376:G:T	rs12611005	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.732748102975356	6.224958738016306	GCCAATTAAG
chr19	20961123	20961124	chr19:20961124:G:A	rs12463337	G	A	g	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	21082952	21082953	chr19:21082953:A:G	rs12973640	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr19	21142946	21142947	chr19:21142947:C:T	rs62124917	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.448864178786659	5.781143412083257	GGCAATTAGA
chr19	21210291	21210292	chr19:21210292:A:G	rs7247871	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	21398017	21398018	chr19:21398018:G:T	rs7246684	G	T	.	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr19	21608860	21608861	chr19:21608861:C:G	rs1850937	C	G	.	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	21969052	21969053	chr19:21969053:G:A	rs137942945	G	A	g	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr19	23074995	23074996	chr19:23074996:A:T	rs374830899	A	T	-	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr19	23305614	23305615	chr19:23305615:C:G	rs367674	C	G	-	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr19	23329379	23329380	chr19:23329380:C:A	rs1820675	C	A	-	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr19	23374049	23374050	chr19:23374050:T:C	rs17554633	T	C	.	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	27745974	27745975	chr19:27745975:T:C	rs1015284816	T	C	.	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr19	28396340	28396341	chr19:28396341:T:A	rs56159843	T	A	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	28405964	28405965	chr19:28405965:A:G	rs10408649	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	28406393	28406394	chr19:28406394:A:G	rs1029661	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr19	28406401	28406402	chr19:28406402:C:T	rs7249889	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr19	28562881	28562882	chr19:28562882:T:C	rs8101875	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	28786124	28786125	chr19:28786125:A:G	rs57681667	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.220683642931706	-0.619873581486953	GGTAATGAGC
chr19	28845756	28845757	chr19:28845757:C:T	rs4805278	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	28922727	28922728	chr19:28922728:C:T	rs35909958	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	29079624	29079625	chr19:29079625:T:C	rs73019201	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr19	29079633	29079634	chr19:29079634:A:T	rs62111614	A	T	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr19	29094342	29094343	chr19:29094343:T:G	rs2278441	T	G	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	29405328	29405329	chr19:29405329:T:C	rs17717387	T	C	t	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr19	29436888	29436889	chr19:29436889:G:A	rs533338301	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	29739341	29739342	chr19:29739342:A:G	rs10425059	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	29813575	29813576	chr19:29813576:T:C	rs997669	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	30074952	30074953	chr19:30074953:A:C	rs192843575	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	5.739039283655441	2.739653323692977	GCCCATTAGC
chr19	30079095	30079096	chr19:30079096:C:A	chr19:30079096:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr19	30862705	30862706	chr19:30862706:A:G	rs4804943	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr19	30978947	30978948	chr19:30978948:A:G	rs77741208	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	31109548	31109549	chr19:31109549:A:G	rs571372903	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	31193524	31193525	chr19:31193525:G:A	rs10411730	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr19	31216347	31216348	chr19:31216348:A:G	rs1155806	A	G	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr19	31310223	31310224	chr19:31310224:G:A	rs1078373	G	A	G	Hoxd3.mouse_homeodomain_1	6	1	+	6.220683642931706	4.715704985617274	GGTAATGAGC
chr19	31713404	31713405	chr19:31713405:A:G	rs10417470	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr19	32653495	32653496	chr19:32653496:C:T	rs7255287	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	32653533	32653534	chr19:32653534:A:C	rs79232331	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr19	32700285	32700286	chr19:32700286:C:T	rs8112955	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr19	32702255	32702256	chr19:32702256:G:C	rs113282417	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	32779249	32779250	chr19:32779250:A:G	rs6510288	A	G	a	Hoxd3.mouse_homeodomain_1	5	1	-	5.680245641240751	-1.1603115831779085	GGCAATGAGC
chr19	32855228	32855229	chr19:32855229:G:A	rs8113166	G	A	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	32885296	32885297	chr19:32885297:G:C	rs58744764	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	32909490	32909491	chr19:32909491:C:T	rs73571780	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.277319169927424	5.2847045304086455	GGTCATTAGG
chr19	33486299	33486300	chr19:33486300:C:G	rs28483178	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr19	33668453	33668454	chr19:33668454:G:T	rs7250759	G	T	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	33769640	33769641	chr19:33769641:C:G	rs576183391	C	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	33796423	33796424	chr19:33796424:G:T	rs1047453263	G	T	g	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr19	33828327	33828328	chr19:33828328:T:C	rs461998	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.604407200393974	4.744310756833228	AGTAATTAGC
chr19	34113353	34113354	chr19:34113354:T:C	rs73593522	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	34319552	34319553	chr19:34319553:G:A	rs143910732	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.516483198565452	7.056921200256407	AGCAATTACG
chr19	34667483	34667484	chr19:34667484:T:C	rs4806034	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr19	34667504	34667505	chr19:34667505:T:C	rs2902473	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	34713118	34713119	chr19:34713119:A:C	rs11668379	A	C	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr19	34787534	34787535	chr19:34787535:A:C	rs117377425	A	C	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr19	34969298	34969299	chr19:34969299:A:T	rs35993355	A	T	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	35196050	35196051	chr19:35196051:C:T	rs4805112	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	35209143	35209144	chr19:35209144:T:C	rs6510472	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.066058952183682	5.0772010502705	CCTAATTAAC
chr19	35236750	35236751	chr19:35236751:T:C	rs118056438	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.901879681539695	0.061322457121035234	AGCAATTAGG
chr19	35374927	35374928	chr19:35374928:A:G	rs11670523	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr19	36008270	36008271	chr19:36008271:C:T	rs2285424	C	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr19	36141754	36141755	chr19:36141755:T:C	rs17884904	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr19	36254857	36254858	chr19:36254858:G:A	rs4806303	G	A	g	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	36489958	36489959	chr19:36489959:C:T	rs142207550	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr19	36527083	36527084	chr19:36527084:T:C	rs116575968	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	37594581	37594582	chr19:37594582:A:T	rs114629463	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	37933988	37933989	chr19:37933989:A:G	rs191349084	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.122884842874458	4.262788399313711	AGCAATTAAC
chr19	38066671	38066672	chr19:38066672:C:T	rs34900817	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	38087385	38087386	chr19:38087386:T:C	rs1725489	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr19	38096080	38096081	chr19:38096081:A:G	rs1654365	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	38836928	38836929	chr19:38836929:C:A	rs73040183	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.450525492992999	5.942736128033949	GCCAATTACC
chr19	39195228	39195229	chr19:39195229:A:C	rs8103222	A	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	39391321	39391322	chr19:39391322:G:T	rs746883152	G	T	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	39391332	39391333	chr19:39391333:A:C	chr19:39391333:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	39430838	39430839	chr19:39430839:G:C	rs251855	G	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr19	40141778	40141779	chr19:40141779:T:C	rs28890790	T	C	t	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr19	40219974	40219975	chr19:40219975:G:T	rs114691974	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.054769021883032	6.370698198568869	GGCAATTAAC
chr19	40220000	40220001	chr19:40220001:G:A	rs141294839	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr19	40220001	40220002	chr19:40220002:T:A	rs150802937	T	A	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr19	40312782	40312783	chr19:40312783:G:A	rs66623822	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	40420553	40420554	chr19:40420554:C:G	rs7251476	C	G	c	Hoxd3.mouse_homeodomain_1	8	1	-	6.466705306321288	6.081308823347045	CCCAATTAGC
chr19	40426256	40426257	chr19:40426257:A:C	chr19:40426257:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	40777561	40777562	chr19:40777562:G:T	rs79016062	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	40804665	40804666	chr19:40804666:A:G	rs3733829	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	40875404	40875405	chr19:40875405:A:G	rs73048976	A	G	a	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr19	41355768	41355769	chr19:41355769:C:T	rs2317130	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr19	41380549	41380550	chr19:41380550:T:G	rs13345590	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	7.122884842874458	3.2823856663223907	AGCAATTAAC
chr19	41424082	41424083	chr19:41424083:G:A	rs284658	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	41649531	41649532	chr19:41649532:A:C	rs4803495	A	C	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr19	41802393	41802394	chr19:41802394:G:A	rs7251336	G	A	g	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr19	44095234	44095235	chr19:44095235:G:C	chr19:44095235:G:C	G	C	.	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr19	44165376	44165377	chr19:44165377:A:G	rs764867136	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr19	44346468	44346469	chr19:44346469:G:T	rs2196187	G	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr19	44654769	44654770	chr19:44654770:T:C	rs3786495	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr19	44692042	44692043	chr19:44692043:T:G	rs16979372	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr19	45467712	45467713	chr19:45467713:G:C	rs1051705705	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr19	45585092	45585093	chr19:45585093:A:T	rs58173251	A	T	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr19	46226040	46226041	chr19:46226041:G:A	rs2017924	G	A	g	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	46635239	46635240	chr19:46635240:C:G	rs3810296	C	G	g	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr19	46863827	46863828	chr19:46863828:C:T	rs73057356	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	46866495	46866496	chr19:46866496:G:C	rs11669769	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	48812727	48812728	chr19:48812728:C:T	rs58129411	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr19	48812734	48812735	chr19:48812735:C:T	rs3760788	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr19	48838201	48838202	chr19:48838202:A:G	rs191834863	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	49441837	49441838	chr19:49441838:C:T	chr19:49441838:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr19	49593530	49593531	chr19:49593531:G:A	rs1405308101	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.6738324588039175	7.214270460494872	GCCAATTAGG
chr19	49672478	49672479	chr19:49672479:A:G	rs1014122028	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr19	49672520	49672521	chr19:49672521:G:T	rs533045713	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	49953512	49953513	chr19:49953513:T:A	rs8107645	T	A	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr19	50001336	50001337	chr19:50001337:C:T	rs77580056	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	50025796	50025797	chr19:50025797:C:T	rs4802648	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr19	50206032	50206033	chr19:50206033:A:C	rs146114394	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr19	50300993	50300994	chr19:50300994:G:A	rs117143947	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	50317199	50317200	chr19:50317200:A:C	rs10853812	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr19	50565888	50565889	chr19:50565889:G:A	rs60246192	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr19	50820419	50820420	chr19:50820420:C:T	rs5515	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr19	50980363	50980364	chr19:50980364:G:C	rs35354640	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	51484681	51484682	chr19:51484682:C:G	rs79226814	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	51527907	51527908	chr19:51527908:A:G	rs897783	A	G	a	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	51619940	51619941	chr19:51619941:A:G	rs73050880	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr19	51795236	51795237	chr19:51795237:C:T	rs11084120	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr19	51822647	51822648	chr19:51822648:C:T	rs79100666	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	51824530	51824531	chr19:51824531:C:T	rs3752125	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.540805396797378	6.608921217788804	GCCAATTAGT
chr19	52507707	52507708	chr19:52507708:G:C	rs622805	G	C	-	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	52538422	52538423	chr19:52538423:C:A	rs3960293	C	A	N	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	52664567	52664568	chr19:52664568:C:T	rs67885014	C	T	c	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr19	52784041	52784042	chr19:52784042:T:G	rs12972723	T	G	-	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr19	52796215	52796216	chr19:52796216:G:C	rs79767538	G	C	g	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	52796221	52796222	chr19:52796222:A:G	rs73067535	A	G	a	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	52914085	52914086	chr19:52914086:C:G	rs11084206	C	G	c	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr19	53581399	53581400	chr19:53581400:G:A	rs17207180	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr19	53652603	53652604	chr19:53652604:G:A	rs115585642	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr19	53652611	53652612	chr19:53652612:G:C	rs7257758	G	C	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr19	53793343	53793344	chr19:53793344:T:C	rs190421746	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	53870786	53870787	chr19:53870787:C:T	rs16985221	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	53870789	53870790	chr19:53870790:G:C	rs557941059	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	53978465	53978466	chr19:53978466:G:T	rs537065964	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.835921975967242	6.288932777042308	GCCAATTAGC
chr19	54474815	54474816	chr19:54474816:A:G	rs7245711	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr19	54655270	54655271	chr19:54655271:G:A	rs4806798	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr19	55586169	55586170	chr19:55586170:C:T	rs1425297435	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.277319169927424	5.609598403224022	GGTCATTAGG
chr19	55624738	55624739	chr19:55624739:C:G	chr19:55624739:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr19	55653278	55653279	chr19:55653279:G:A	rs184498111	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	55653304	55653305	chr19:55653305:C:T	rs28375493	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr19	56109180	56109181	chr19:56109181:G:A	rs77070554	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr19	56174093	56174094	chr19:56174094:G:A	rs175530	G	A	a	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr19	56174105	56174106	chr19:56174106:C:G	rs175531	C	G	c	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr19	56174122	56174123	chr19:56174123:A:C	rs274162	A	C	a	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	56910961	56910962	chr19:56910962:A:G	rs7259442	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	57350774	57350775	chr19:57350775:A:G	rs59110325	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.007267207914503	6.466829206223548	TGTAATTAGC
chr19	57492789	57492790	chr19:57492790:C:T	rs2074075	C	T	N	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr19	57675036	57675037	chr19:57675037:G:A	rs182441525	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	57803308	57803309	chr19:57803309:T:C	rs8100221	T	C	.	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr19	57827591	57827592	chr19:57827592:A:G	rs4480910	A	G	.	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr19	58099842	58099843	chr19:58099843:C:T	rs12461832	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	69430	69431	chr2:69431:C:T	rs11695591	C	T	c	Hoxd3.mouse_homeodomain_1	9	1	-	6.9888053792649805	6.603905697503371	GGTAATTACG
chr2	100839	100840	chr2:100840:A:G	rs13031737	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	448527	448528	chr2:448528:C:T	rs58769186	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	484881	484882	chr2:484882:C:T	rs77927590	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	589545	589546	chr2:589546:G:A	rs13420040	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.273186104666311	6.888286422904701	GCTAATTAAG
chr2	1271862	1271863	chr2:1271863:A:G	rs36188033	A	G	G	Hoxd3.mouse_homeodomain_1	6	1	-	6.835921975967242	4.0029710247975405	GCCAATTAGC
chr2	1408509	1408510	chr2:1408510:A:C	rs11685159	A	C	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.989302180477614	7.536291379402548	GGTAATTAGA
chr2	1413471	1413472	chr2:1413472:A:G	rs2071403	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	6.892679504719707	2.736120103383097	GGCAATTAAG
chr2	1559660	1559661	chr2:1559661:A:G	rs4073862	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	6.700736798541729	4.711878896628546	GGCAATTAGT
chr2	1586863	1586864	chr2:1586864:C:T	rs139930294	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr2	1614578	1614579	chr2:1614579:G:A	rs62114654	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	1672714	1672715	chr2:1672715:G:C	rs78615663	G	C	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	1730708	1730709	chr2:1730709:C:T	rs139128996	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	1748779	1748780	chr2:1748780:C:T	rs11127321	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	1757723	1757724	chr2:1757724:A:G	rs6756670	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	1774046	1774047	chr2:1774047:G:C	rs10048704	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.150894896428305	6.7816782267823505	GGTAATTACC
chr2	2026541	2026542	chr2:2026542:C:T	rs1213580	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	2484460	2484461	chr2:2484461:G:A	rs6733005	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	2484464	2484465	chr2:2484465:C:T	rs6721621	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	2558937	2558938	chr2:2558938:T:G	rs1344210735	T	G	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	2564936	2564937	chr2:2564937:T:C	rs143915820	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	2650192	2650193	chr2:2650193:C:T	rs6719244	C	T	.	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	2857336	2857337	chr2:2857337:C:A	rs67501328	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	2888371	2888372	chr2:2888372:G:A	rs11692061	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	2999237	2999238	chr2:2999238:G:A	rs7591035	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	3052264	3052265	chr2:3052265:G:T	rs75319756	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	3091991	3091992	chr2:3091992:G:A	rs12621944	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr2	3151239	3151240	chr2:3151240:G:A	rs12475430	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	3151244	3151245	chr2:3151245:G:A	rs12475431	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	3193917	3193918	chr2:3193918:G:C	rs142651251	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	3288001	3288002	chr2:3288002:C:T	rs35445537	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	3290801	3290802	chr2:3290802:C:T	rs62121505	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr2	3319310	3319311	chr2:3319311:A:G	rs34842466	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	3858151	3858152	chr2:3858152:A:G	rs10495494	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.007267207914503	4.147170764353756	TGTAATTAGC
chr2	3913834	3913835	chr2:3913835:A:C	rs34643227	A	C	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	4175218	4175219	chr2:4175219:A:G	rs1175856	A	G	a	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	4882739	4882740	chr2:4882740:T:C	rs6542644	T	C	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	5042979	5042980	chr2:5042980:A:G	rs79820569	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	5.898970685399792	1.742411284063182	GGCCATTAGC
chr2	5372138	5372139	chr2:5372139:T:C	rs140111496	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	5549283	5549284	chr2:5549284:C:T	rs79030765	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	5549324	5549325	chr2:5549325:T:C	rs13390174	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	5740655	5740656	chr2:5740656:C:T	rs2564051	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	5761024	5761025	chr2:5761025:G:A	rs10174996	G	A	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	5834643	5834644	chr2:5834644:A:C	rs1319556	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	6510709	6510710	chr2:6510710:T:C	rs16865273	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.450525492992999	-0.39003173142566017	GCCAATTACC
chr2	7023169	7023170	chr2:7023170:G:A	rs114594834	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	7196123	7196124	chr2:7196124:G:A	rs115481937	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.4444757986496235	7.503391442821062	ACTAATTAGC
chr2	7265712	7265713	chr2:7265713:C:T	rs4669171	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	7555102	7555103	chr2:7555103:T:G	rs13013575	T	G	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	7595579	7595580	chr2:7595580:C:T	rs189209189	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	5.898970685399792	5.231249918696392	GGCCATTAGC
chr2	7886888	7886889	chr2:7886889:T:C	rs2302672	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	8174559	8174560	chr2:8174560:A:G	rs13003164	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	8347165	8347166	chr2:8347166:C:T	rs9287698	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	8448944	8448945	chr2:8448945:G:A	rs528338613	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	8494572	8494573	chr2:8494573:T:A	rs187442764	T	A	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	8494590	8494591	chr2:8494591:T:C	rs72782785	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.241174800232684	5.252316898319502	GGTAATTAGT
chr2	8588778	8588779	chr2:8588779:A:G	rs3856442	A	G	g	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	8590162	8590163	chr2:8590163:G:A	rs3912049	G	A	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.894837620138681	7.435275621829636	GCCAATTAAC
chr2	8820635	8820636	chr2:8820636:A:C	rs6704890	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	8927892	8927893	chr2:8927893:G:T	rs116022117	G	T	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	9106518	9106519	chr2:9106519:T:C	rs328633	T	C	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	9175463	9175464	chr2:9175464:A:T	rs4669379	A	T	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	9594148	9594149	chr2:9594149:T:C	rs11674769	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	9720690	9720691	chr2:9720691:A:G	rs58961346	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	9720694	9720695	chr2:9720695:A:G	rs4669435	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	9746413	9746414	chr2:9746414:C:T	rs12476232	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	10245883	10245884	chr2:10245884:G:A	rs116804556	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	10380160	10380161	chr2:10380161:C:T	rs115315413	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.523462835073753	6.363655333231662	CGCAATTAAG
chr2	10575023	10575024	chr2:10575024:A:G	rs10195255	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	10575042	10575043	chr2:10575043:C:T	rs56038505	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	5.898970685399792	5.603854106229928	GGCCATTAGC
chr2	11017945	11017946	chr2:11017946:G:A	rs6733287	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	11017988	11017989	chr2:11017989:A:G	rs6720344	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	11106700	11106701	chr2:11106701:C:T	rs776542582	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	11343300	11343301	chr2:11343301:A:G	rs139834607	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	11343306	11343307	chr2:11343307:T:C	rs6709854	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	11701334	11701335	chr2:11701335:C:T	rs73179398	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.9888053792649805	6.603905697503371	GGTAATTACG
chr2	11701346	11701347	chr2:11701347:A:G	rs141331557	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	11802239	11802240	chr2:11802240:A:G	rs73915575	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	12006089	12006090	chr2:12006090:G:C	rs80072084	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	12109851	12109852	chr2:12109852:C:T	rs148493076	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	12577271	12577272	chr2:12577272:C:T	rs116290778	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.439408687090748	6.498324331262187	GGTCATTAGC
chr2	12702896	12702897	chr2:12702897:C:T	rs80297813	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.279477285346397	5.755337863776585	GCTCATTAGC
chr2	14451668	14451669	chr2:14451669:T:C	rs1356175	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	15042244	15042245	chr2:15042245:A:C	rs4668855	A	C	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	15562384	15562385	chr2:15562385:T:C	rs115588242	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	15562407	15562408	chr2:15562408:G:A	rs73915379	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	15730328	15730329	chr2:15730329:T:C	rs62117264	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr2	15730337	15730338	chr2:15730338:G:A	chr2:15730338:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	15809238	15809239	chr2:15809239:G:A	rs9678173	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	15814968	15814969	chr2:15814969:C:T	rs11901571	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	15954546	15954547	chr2:15954547:A:G	rs4669019	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	16061443	16061444	chr2:16061444:C:T	rs7608858	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.450525492992999	6.155408913823135	GCCAATTACC
chr2	16163043	16163044	chr2:16163044:A:C	rs144836279	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.167074709756593	4.717919239481741	CGTAATTAGC
chr2	16245007	16245008	chr2:16245008:A:G	rs78414869	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	17857412	17857413	chr2:17857413:C:G	rs11898180	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	18047271	18047272	chr2:18047272:T:C	rs7588918	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	18092326	18092327	chr2:18092327:T:C	rs2345098	T	C	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.989302180477614	7.374201862239223	GGTAATTAGA
chr2	18311734	18311735	chr2:18311735:G:T	rs73224362	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.904037796958669	5.101003855994896	ACCAATTAGC
chr2	18370242	18370243	chr2:18370243:G:A	rs11096532	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.439408687090748	6.144292107920884	GGTCATTAGC
chr2	18780582	18780583	chr2:18780583:T:C	rs7599089	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	18780590	18780591	chr2:18780591:C:T	rs13339828	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	18824277	18824278	chr2:18824278:C:T	rs11096560	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.595207023573987	7.300090444404122	GGTAATTAAC
chr2	19302296	19302297	chr2:19302297:C:G	rs111385353	C	G	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	20040906	20040907	chr2:20040907:C:A	rs3731673	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	20100911	20100912	chr2:20100912:A:C	rs907865	A	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	20219789	20219790	chr2:20219790:C:T	rs115444530	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr2	20232319	20232320	chr2:20232320:C:T	rs6734686	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	20506404	20506405	chr2:20506405:T:C	rs533614441	T	C	t	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	20781899	20781900	chr2:20781900:C:T	rs577920223	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.30929062122411	7.368206265395549	AGTAATTAGT
chr2	21420791	21420792	chr2:21420792:C:G	rs12618565	C	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	23079224	23079225	chr2:23079225:G:A	rs13036116	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	23557144	23557145	chr2:23557145:C:T	rs4284788	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	23705766	23705767	chr2:23705767:A:G	rs7560892	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	23777780	23777781	chr2:23777781:A:G	rs80209559	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	23850939	23850940	chr2:23850940:C:T	rs77400814	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	23940341	23940342	chr2:23940342:G:T	chr2:23940342:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	24118441	24118442	chr2:24118442:T:C	rs6708380	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	24192176	24192177	chr2:24192177:C:G	rs75945474	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	24375788	24375789	chr2:24375789:C:T	rs2702120	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	24435671	24435672	chr2:24435672:C:A	chr2:24435672:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	25372324	25372325	chr2:25372325:T:C	rs1010658	T	C	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	25867784	25867785	chr2:25867785:G:A	rs10205527	G	A	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	25867784	25867785	chr2:25867785:G:C	chr2:25867785:G:C	G	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	26413217	26413218	chr2:26413218:C:T	rs2384363	C	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr2	27011273	27011274	chr2:27011274:C:G	rs191385633	C	G	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr2	27218776	27218777	chr2:27218777:A:G	rs724311	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.501233327402089	7.433117506410662	AGTAATTAAG
chr2	27555299	27555300	chr2:27555300:A:C	rs12995461	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr2	28391926	28391927	chr2:28391927:C:T	rs925255	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	28391964	28391965	chr2:28391965:G:A	rs112482080	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	28409482	28409483	chr2:28409483:C:T	rs114824146	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	28409509	28409510	chr2:28409510:G:A	rs7606480	G	A	g	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	29269862	29269863	chr2:29269863:G:T	rs908314522	G	T	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	29493297	29493298	chr2:29493298:G:A	rs11689118	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr2	29848482	29848483	chr2:29848483:A:G	rs4074251	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	30031432	30031433	chr2:30031433:C:T	chr2:30031433:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	30070789	30070790	chr2:30070790:C:T	rs76836927	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	30110353	30110354	chr2:30110354:A:G	rs72783696	A	G	a	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	30175987	30175988	chr2:30175988:A:G	rs17009192	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	30269039	30269040	chr2:30269040:G:C	rs141934083	G	C	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.374201862239223	7.214270460494872	GGTAATTAGG
chr2	30650500	30650501	chr2:30650501:C:T	rs2593466	C	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr2	30738155	30738156	chr2:30738156:C:G	rs55799526	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	30790983	30790984	chr2:30790984:C:T	rs141558852	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	31397230	31397231	chr2:31397231:C:A	rs117082837	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	31504546	31504547	chr2:31504547:A:C	rs74699920	A	C	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	32851738	32851739	chr2:32851739:G:T	rs549444949	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	32882721	32882722	chr2:32882722:T:C	rs80106645	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	32946845	32946846	chr2:32946846:A:G	rs112209471	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.304615789157963	2.1480563878213528	CCCAATTAGG
chr2	33133011	33133012	chr2:33133012:A:C	rs897090	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	33247649	33247650	chr2:33247650:T:C	rs528993117	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.435275621829636	6.894837620138681	GCTAATTAAC
chr2	33535942	33535943	chr2:33535943:T:C	rs12479397	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	33586637	33586638	chr2:33586638:T:A	rs35346181	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	33788280	33788281	chr2:33788281:A:G	rs57588016	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	34005142	34005143	chr2:34005143:G:A	rs575450869	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.6738324588039175	6.732748102975356	GCCAATTAGG
chr2	34242892	34242893	chr2:34242893:G:A	rs73927737	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	34242894	34242895	chr2:34242895:C:T	rs11124366	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	34868225	34868226	chr2:34868226:T:G	rs7600259	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.122884842874458	3.2823856663223907	AGCAATTAAC
chr2	35198012	35198013	chr2:35198013:G:A	rs72871165	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr2	35293279	35293280	chr2:35293280:A:C	rs6710170	A	C	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	35871752	35871753	chr2:35871753:G:A	rs62147176	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	36028602	36028603	chr2:36028603:C:T	rs1352513	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr2	36054078	36054079	chr2:36054079:C:T	rs76107	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	36982540	36982541	chr2:36982541:G:T	rs11124556	G	T	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr2	37036364	37036365	chr2:37036365:T:C	rs17404648	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr2	37387779	37387780	chr2:37387780:G:A	rs112430455	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	7.122884842874458	7.663322844565413	AGCAATTAAC
chr2	37459407	37459408	chr2:37459408:T:C	rs17482317	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	37626039	37626040	chr2:37626040:G:A	rs114814051	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	37733469	37733470	chr2:37733470:A:T	rs17511102	A	T	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.435275621829636	3.6585765000125674	GCTAATTAAC
chr2	37802987	37802988	chr2:37802988:G:A	rs1529555	G	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	38146946	38146947	chr2:38146947:C:T	rs12104947	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	38160181	38160182	chr2:38160182:T:G	rs7587673	T	G	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.44231768323065	4.4429317232681855	AGTAATTAGG
chr2	38167508	38167509	chr2:38167509:G:A	rs232568	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr2	38239090	38239091	chr2:38239091:G:C	rs56100502	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	38448750	38448751	chr2:38448751:G:A	rs13021626	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	38448778	38448779	chr2:38448779:C:T	rs370939182	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	38666966	38666967	chr2:38666967:C:T	rs78064564	C	T	c	Hoxd3.mouse_homeodomain_1	2	1	+	6.8337638605482685	7.374201862239223	GGCAATTAGG
chr2	38754177	38754178	chr2:38754178:G:A	rs3108662	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	39219331	39219332	chr2:39219332:C:T	rs145186690	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	39413336	39413337	chr2:39413337:G:A	rs73924007	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	39495294	39495295	chr2:39495295:A:G	rs75473507	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	39893748	39893749	chr2:39893749:C:G	rs138444025	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.501233327402089	7.663322844565413	AGTAATTAAG
chr2	40073460	40073461	chr2:40073461:A:G	rs11676262	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.503391442821062	7.435275621829636	ACTAATTAAC
chr2	40304403	40304404	chr2:40304404:C:G	rs72939240	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.595207023573987	7.435275621829636	GGTAATTAAC
chr2	40403317	40403318	chr2:40403318:A:G	rs35920920	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	40410641	40410642	chr2:40410642:T:C	rs2160238	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	40421943	40421944	chr2:40421944:A:G	rs13414307	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr2	40635882	40635883	chr2:40635883:A:G	rs2216039	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	40635895	40635896	chr2:40635896:G:T	rs2216038	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.8337638605482685	6.304739689060224	GGCAATTAGG
chr2	40635919	40635920	chr2:40635920:T:A	rs72945706	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	41040019	41040020	chr2:41040020:G:C	rs150634556	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	41121393	41121394	chr2:41121394:A:G	rs2216817	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	41127581	41127582	chr2:41127582:A:G	rs11901869	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	41207771	41207772	chr2:41207772:C:T	rs553907648	C	T	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	41605466	41605467	chr2:41605467:G:A	rs6544451	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	41782883	41782884	chr2:41782884:A:G	rs74521159	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr2	41910152	41910153	chr2:41910153:T:G	rs6749233	T	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	42053217	42053218	chr2:42053218:C:T	rs35771566	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.277319169927424	5.609598403224022	GGTCATTAGG
chr2	42104593	42104594	chr2:42104594:G:A	rs72974954	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	42171972	42171973	chr2:42171973:C:G	rs923393745	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	42171977	42171978	chr2:42171978:A:G	rs116400752	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	42388685	42388686	chr2:42388686:T:C	rs76072482	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	42921139	42921140	chr2:42921140:T:C	rs554065915	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr2	43100843	43100844	chr2:43100844:T:C	rs114734662	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	43116473	43116474	chr2:43116474:A:G	rs6712537	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr2	43116518	43116519	chr2:43116519:C:G	rs62135367	C	G	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	43175538	43175539	chr2:43175539:G:A	rs78580000	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	43360311	43360312	chr2:43360312:G:T	rs3901678	G	T	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	43371793	43371794	chr2:43371794:T:C	rs542422632	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr2	43835146	43835147	chr2:43835147:C:T	rs13396273	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr2	43987203	43987204	chr2:43987204:T:G	rs62135120	T	G	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	44705714	44705715	chr2:44705715:T:C	rs4145981	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.122884842874458	4.262788399313711	AGCAATTAAC
chr2	44753979	44753980	chr2:44753980:T:G	rs3738980	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	44895382	44895383	chr2:44895383:C:G	rs17039165	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.277319169927424	6.117387768183073	GGTCATTAGG
chr2	44964965	44964966	chr2:44964966:G:A	chr2:44964966:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	44964965	44964966	chr2:44964966:G:T	rs12712929	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	45102540	45102541	chr2:45102541:C:T	rs7585207	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	45102541	45102542	chr2:45102542:G:A	rs11690431	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	45743296	45743297	chr2:45743297:A:G	rs1914312	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	46016173	46016174	chr2:46016174:A:G	rs3738898	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	46016176	46016177	chr2:46016177:C:A	rs77652094	C	A	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	46090951	46090952	chr2:46090952:T:C	rs74461210	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	46098971	46098972	chr2:46098972:T:C	rs4953311	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	46146456	46146457	chr2:46146457:A:G	rs10427180	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	46185105	46185106	chr2:46185106:A:G	rs61760007	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	46338382	46338383	chr2:46338383:T:C	rs4953352	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	46572712	46572713	chr2:46572713:G:T	rs1451153	G	T	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr2	46663044	46663045	chr2:46663045:A:G	rs35731375	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	46663048	46663049	chr2:46663049:G:A	rs75948047	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	46812623	46812624	chr2:46812624:G:A	rs748144315	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.450525492992999	6.155408913823135	GCCAATTACC
chr2	46812640	46812641	chr2:46812641:G:A	rs76722986	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	46917889	46917890	chr2:46917890:A:G	rs6729621	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	47195452	47195453	chr2:47195453:A:G	rs188026125	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	47295228	47295229	chr2:47295229:A:G	rs10192326	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	47307173	47307174	chr2:47307174:A:G	rs77724614	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	47388900	47388901	chr2:47388901:G:A	rs73927789	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr2	47426333	47426334	chr2:47426334:C:T	rs112753565	C	T	-	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	47623937	47623938	chr2:47623938:G:A	rs10209127	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	47784166	47784167	chr2:47784167:G:C	rs114642331	G	C	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	48269370	48269371	chr2:48269371:A:G	rs115096772	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	48284146	48284147	chr2:48284147:T:A	rs72818485	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	49320415	49320416	chr2:49320416:T:C	rs11685144	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	49756478	49756479	chr2:49756479:T:C	rs6545129	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	50223646	50223647	chr2:50223647:G:T	rs1520528	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	51723900	51723901	chr2:51723901:T:A	rs28967889	T	A	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.525620950492726	5.731535273647116	CCCAATTAAC
chr2	51723907	51723908	chr2:51723908:G:A	rs11691890	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	6.525620950492726	6.001481528922915	CCCAATTAAC
chr2	52110084	52110085	chr2:52110085:A:G	rs13000461	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	52343224	52343225	chr2:52343225:G:A	rs56144224	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.241240225091396	6.081432723249305	CGCAATTACC
chr2	52595672	52595673	chr2:52595673:T:G	rs952261	T	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.066058952183682	6.6217468250380005	CCTAATTAAC
chr2	52897449	52897450	chr2:52897450:T:C	rs4672065	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	53067172	53067173	chr2:53067173:T:C	rs17189154	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	53130063	53130064	chr2:53130064:G:C	rs190169125	G	C	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	53452589	53452590	chr2:53452590:G:A	rs1521928	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	53452613	53452614	chr2:53452614:T:C	rs1521927	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr2	53452617	53452618	chr2:53452618:G:A	rs77907809	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.466705306321288	6.306897804479197	CCCAATTAGC
chr2	53728375	53728376	chr2:53728376:A:C	rs17039525	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.433117506410662	6.336234814098862	GGTAATTAAG
chr2	54571392	54571393	chr2:54571393:A:G	rs1000289240	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	55116051	55116052	chr2:55116052:C:T	rs960869791	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	55156605	55156606	chr2:55156606:C:T	rs7608118	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	55491025	55491026	chr2:55491026:C:T	rs920973725	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr2	55498811	55498812	chr2:55498812:A:G	rs10181648	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	55841897	55841898	chr2:55841898:C:T	rs4519567	C	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	56168320	56168321	chr2:56168321:C:T	rs993898351	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	56168328	56168329	chr2:56168329:A:G	rs112079482	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	56230376	56230377	chr2:56230377:T:A	rs1194929009	T	A	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	56789256	56789257	chr2:56789257:A:G	rs2193624	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	57631858	57631859	chr2:57631859:G:A	rs1405819	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	58081125	58081126	chr2:58081126:G:T	rs10176942	G	T	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr2	58709834	58709835	chr2:58709835:C:T	rs10211534	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	58912371	58912372	chr2:58912372:T:C	rs17049820	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	59013503	59013504	chr2:59013504:A:G	rs2192459	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	59585845	59585846	chr2:59585846:C:T	rs536181465	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	59655054	59655055	chr2:59655055:C:A	rs268069	C	A	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	60181169	60181170	chr2:60181170:C:A	rs7585504	C	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	6.8337638605482685	6.149693037234106	GGCAATTAGG
chr2	60247530	60247531	chr2:60247531:G:A	rs183798731	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.8337638605482685	6.892679504719707	GGCAATTAGG
chr2	60548684	60548685	chr2:60548685:T:C	rs1427409	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	61239163	61239164	chr2:61239164:G:C	rs77907930	G	C	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	61413116	61413117	chr2:61413117:C:T	rs57444330	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	61549766	61549767	chr2:61549767:C:G	rs778752	C	G	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	61937752	61937753	chr2:61937753:C:G	rs10187809	C	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	62287906	62287907	chr2:62287907:G:C	rs112337916	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	62335647	62335648	chr2:62335648:A:G	rs56051730	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	62672533	62672534	chr2:62672534:G:A	rs72887091	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	63288188	63288189	chr2:63288189:C:T	rs913353657	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	64049665	64049666	chr2:64049666:C:G	rs1333063618	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	64947011	64947012	chr2:64947012:G:C	rs7576477	G	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	65354165	65354166	chr2:65354166:C:T	rs11684155	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	65636926	65636927	chr2:65636927:C:G	rs17030559	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.962953441130107	7.122884842874458	ACCAATTAAC
chr2	65691975	65691976	chr2:65691976:G:C	rs879521125	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr2	66082877	66082878	chr2:66082878:A:T	rs13018048	A	T	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	66186552	66186553	chr2:66186553:C:T	rs1358695	C	T	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	66387388	66387389	chr2:66387389:C:T	rs565962195	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	66447519	66447520	chr2:66447520:A:G	rs79238382	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	66508335	66508336	chr2:66508336:G:A	rs57377681	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	66508366	66508367	chr2:66508367:C:G	rs4605359	C	G	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	66691573	66691574	chr2:66691574:C:T	rs114665863	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	66691576	66691577	chr2:66691577:T:C	chr2:66691577:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	66827982	66827983	chr2:66827983:C:A	rs17032597	C	A	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	67050966	67050967	chr2:67050967:C:T	rs4671770	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	67063130	67063131	chr2:67063131:G:A	rs2861317	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.464547190902314	6.304739689060224	CGCAATTAGG
chr2	67347152	67347153	chr2:67347153:G:T	rs148846083	G	T	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	67776174	67776175	chr2:67776175:T:C	rs17034385	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	67877677	67877678	chr2:67877678:A:G	chr2:67877678:A:G	A	G	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	67877677	67877678	chr2:67877678:A:T	rs11126165	A	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	67899454	67899455	chr2:67899455:G:A	rs6741065	G	A	g	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr2	68449264	68449265	chr2:68449265:A:G	rs74861040	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.2190107174197315	6.678572715728777	AGTAATTACC
chr2	68595086	68595087	chr2:68595087:G:A	rs72905913	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.300090444404122	7.368206265395549	GGTAATTAAT
chr2	69103341	69103342	chr2:69103342:C:T	rs58760592	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	69293125	69293126	chr2:69293126:G:A	rs34570046	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	69349014	69349015	chr2:69349015:G:C	rs4549136	G	C	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	69660750	69660751	chr2:69660751:G:A	rs1396799	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	70108474	70108475	chr2:70108475:G:A	rs1041266286	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr2	70108477	70108478	chr2:70108478:C:G	rs117523701	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	70432237	70432238	chr2:70432238:A:G	rs1667110	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	71067127	71067128	chr2:71067128:G:A	rs71414877	G	A	.	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	71278351	71278352	chr2:71278352:C:T	rs6760340	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr2	71578826	71578827	chr2:71578827:A:G	rs1015082296	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.279477285346397	3.4193808417856495	GCTCATTAGC
chr2	71685781	71685782	chr2:71685782:C:T	rs142721362	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	72027141	72027142	chr2:72027142:C:T	rs4852838	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	72124566	72124567	chr2:72124567:A:G	rs7584750	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	73175674	73175675	chr2:73175675:C:G	rs111410687	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	73952847	73952848	chr2:73952848:A:C	rs369336995	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	74188126	74188127	chr2:74188127:C:G	rs145459800	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	74507862	74507863	chr2:74507863:G:A	rs377327714	G	A	-	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr2	74507867	74507868	chr2:74507868:A:G	rs906296742	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	74862673	74862674	chr2:74862674:T:G	rs4853065	T	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	74894517	74894518	chr2:74894518:C:T	rs10865404	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.464547190902314	7.004985192593269	CGCAATTAGG
chr2	75181891	75181892	chr2:75181892:C:G	rs726506	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.273186104666311	6.9039694350203575	GCTAATTAAG
chr2	75322220	75322221	chr2:75322221:A:C	rs17582248	A	C	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	75322253	75322254	chr2:75322254:A:G	rs7562368	A	G	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	75375547	75375548	chr2:75375548:T:G	rs60460340	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr2	75422313	75422314	chr2:75422314:A:G	rs548288138	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	75686468	75686469	chr2:75686469:A:G	rs13391581	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	75730559	75730560	chr2:75730560:A:T	rs35429768	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	76701092	76701093	chr2:76701093:C:A	rs13394764	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	77278038	77278039	chr2:77278039:G:A	rs6547142	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.536291379402548	7.241174800232684	GGTAATTAGC
chr2	78034972	78034973	chr2:78034973:G:A	rs1405588	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	78363718	78363719	chr2:78363719:T:C	rs12713955	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.277319169927424	3.4172227263666755	GGTCATTAGG
chr2	79088374	79088375	chr2:79088375:T:C	rs2073441	T	C	.	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	80413291	80413292	chr2:80413292:C:G	rs7589069	C	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.904037796958669	6.518641313984426	ACCAATTAGC
chr2	81524215	81524216	chr2:81524216:C:G	rs183869217	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.439408687090748	6.070192017444794	GGTCATTAGC
chr2	81524216	81524217	chr2:81524217:T:C	rs79745095	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	82024042	82024043	chr2:82024043:C:G	rs6735164	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	83283742	83283743	chr2:83283743:A:C	rs6547477	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	83370435	83370436	chr2:83370436:T:G	rs11126912	T	G	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	83730715	83730716	chr2:83730716:G:C	rs62154641	G	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	84118559	84118560	chr2:84118560:G:A	rs1526700	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	84322761	84322762	chr2:84322762:G:T	rs76410509	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	84396480	84396481	chr2:84396481:A:G	rs6739337	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr2	85151770	85151771	chr2:85151771:C:A	rs2583539	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	85216696	85216697	chr2:85216697:G:A	rs13396934	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	85310681	85310682	chr2:85310682:G:A	rs56407172	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.448367377574026	6.0985938278740965	GGCAATTACG
chr2	85342255	85342256	chr2:85342256:C:T	rs15413	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.435275621829636	7.140159042659771	GCTAATTAAC
chr2	85790768	85790769	chr2:85790769:G:A	rs13385658	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	85942865	85942866	chr2:85942866:T:C	rs2366958	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	85980742	85980743	chr2:85980743:T:G	rs76440811	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.892679504719707	6.448367377574026	GGCAATTAAG
chr2	86026384	86026385	chr2:86026385:A:T	rs12124	A	T	T	Hoxd3.mouse_homeodomain_1	6	1	-	7.595207023573987	4.774620629788712	GGTAATTAAC
chr2	86453738	86453739	chr2:86453739:T:A	rs72930362	T	A	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	88231055	88231056	chr2:88231056:A:C	rs79992736	A	C	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	88600139	88600140	chr2:88600140:G:A	rs55991760	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.904037796958669	6.608921217788804	ACCAATTAGC
chr2	88860618	88860619	chr2:88860619:T:C	rs373830808	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.501233327402089	3.3446739260654783	AGTAATTAAG
chr2	95316214	95316215	chr2:95316215:T:C	rs539850479	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.277319169927424	3.444368218757722	GGTCATTAGG
chr2	96761574	96761575	chr2:96761575:G:A	chr2:96761575:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	98564958	98564959	chr2:98564959:T:C	rs181551373	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr2	98643314	98643315	chr2:98643315:T:C	rs72825732	T	C	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr2	99663735	99663736	chr2:99663736:G:C	rs4611689	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr2	99903811	99903812	chr2:99903812:C:T	rs6733591	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	99982944	99982945	chr2:99982945:T:C	rs13385193	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	99985039	99985040	chr2:99985040:C:T	rs73964395	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.063900836764708	6.904093334922617	CGTAATTAAG
chr2	100654846	100654847	chr2:100654847:G:A	rs6744622	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	100819336	100819337	chr2:100819337:C:G	rs3811558	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	100943559	100943560	chr2:100943560:C:T	rs13010122	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	101162895	101162896	chr2:101162896:G:A	rs11691031	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	101300996	101300997	chr2:101300997:T:C	rs10496353	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.732748102975356	4.7438902010621735	GCCAATTAAG
chr2	101341863	101341864	chr2:101341864:G:T	rs4851423	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	101655040	101655041	chr2:101655041:A:G	rs117467171	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.435275621829636	4.575179178268889	GCTAATTAAC
chr2	101656434	101656435	chr2:101656435:T:C	rs10205340	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr2	101674366	101674367	chr2:101674367:A:G	rs1509498	A	G	G	Hoxd3.mouse_homeodomain_1	2	1	-	7.241174800232684	6.700736798541729	GGTAATTAGT
chr2	101854973	101854974	chr2:101854974:G:A	rs56400989	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.279477285346397	6.338392929517836	GCTCATTAGC
chr2	101854994	101854995	chr2:101854995:C:T	rs80219187	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	102297753	102297754	chr2:102297754:A:G	rs11690644	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	102315073	102315074	chr2:102315074:C:T	rs72823632	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	102428732	102428733	chr2:102428733:A:G	rs12712149	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	102441207	102441208	chr2:102441208:G:A	rs11465700	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	102538609	102538610	chr2:102538610:C:T	rs6761291	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	102716770	102716771	chr2:102716771:A:G	rs17833879	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	103161579	103161580	chr2:103161580:T:C	rs190686418	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	105184579	105184580	chr2:105184580:A:G	rs55763212	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	105184587	105184588	chr2:105184588:T:G	chr2:105184588:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.277319169927424	2.3702241118264893	GGTCATTAGG
chr2	105215735	105215736	chr2:105215736:A:C	rs11683715	A	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	105722811	105722812	chr2:105722812:C:G	rs72823377	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	105750376	105750377	chr2:105750377:C:G	rs114031547	C	G	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	105769656	105769657	chr2:105769657:G:A	rs114466993	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	105799654	105799655	chr2:105799655:A:G	rs12464067	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	106116414	106116415	chr2:106116415:C:T	rs75586188	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	106183073	106183074	chr2:106183074:C:G	rs2167536	C	G	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	106309547	106309548	chr2:106309548:G:C	rs4522599	G	C	-	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	106887976	106887977	chr2:106887977:T:A	rs80108490	T	A	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	107098844	107098845	chr2:107098845:T:A	rs114956521	T	A	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.282386281486299	3.5056871596692303	ACTAATTAGG
chr2	107222739	107222740	chr2:107222740:A:C	rs78760723	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	107419599	107419600	chr2:107419600:A:G	rs147751446	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	108315923	108315924	chr2:108315924:C:G	rs112958189	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	108530622	108530623	chr2:108530623:A:G	rs2118450	A	G	-	Hoxd3.mouse_homeodomain_1	2	1	-	7.30929062122411	6.768852619533155	AGTAATTAGT
chr2	109648013	109648014	chr2:109648014:C:T	rs67706289	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	109648041	109648042	chr2:109648042:A:T	rs112758904	A	T	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	110077068	110077069	chr2:110077069:T:C	rs11690386	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	110191397	110191398	chr2:110191398:C:T	rs11677886	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	110856158	110856159	chr2:110856159:A:G	rs12711785	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	111231771	111231772	chr2:111231772:A:C	rs10174361	A	C	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	111313010	111313011	chr2:111313011:G:A	rs184662208	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	111320341	111320342	chr2:111320342:G:A	rs4849569	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	111570300	111570301	chr2:111570301:G:C	rs3866183	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	111685146	111685147	chr2:111685147:C:T	rs11692656	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	112046296	112046297	chr2:112046297:A:C	rs6748256	A	C	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	112056467	112056468	chr2:112056468:T:C	rs6713344	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	112078672	112078673	chr2:112078673:G:A	rs189780821	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	113029778	113029779	chr2:113029779:G:C	rs4849143	G	C	c	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	113345136	113345137	chr2:113345137:A:G	rs6542128	A	G	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	113819421	113819422	chr2:113819422:C:G	rs62170146	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.374201862239223	6.9888053792649805	GGTAATTAGG
chr2	114461498	114461499	chr2:114461499:C:T	rs57006859	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.904037796958669	6.379898375388858	ACCAATTAGC
chr2	114790126	114790127	chr2:114790127:C:A	rs2574111	C	A	a	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	116719602	116719603	chr2:116719603:C:G	rs894475	C	G	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	116819562	116819563	chr2:116819563:G:T	rs17046388	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.304615789157963	6.171588727151423	CCCAATTAGG
chr2	117065610	117065611	chr2:117065611:T:G	rs74875172	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	117188884	117188885	chr2:117188885:G:A	rs72826667	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr2	117188905	117188906	chr2:117188906:T:G	rs1462857	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.341301925657738	6.244419233345938	ACTAATTAAG
chr2	117966856	117966857	chr2:117966857:T:C	rs59302358	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.960795325711134	4.100698882150386	AGCAATTAAG
chr2	118055479	118055480	chr2:118055480:T:C	rs7589590	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	118132043	118132044	chr2:118132044:G:T	rs72839639	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	118179793	118179794	chr2:118179794:C:A	rs7572165	C	A	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	118187398	118187399	chr2:118187399:C:T	rs6729320	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	118823862	118823863	chr2:118823863:G:A	rs11690226	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	118870124	118870125	chr2:118870125:A:G	rs11895387	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	120014167	120014168	chr2:120014168:A:C	chr2:120014168:A:C	A	C	-	Hoxd3.mouse_homeodomain_1	8	1	+	7.122884842874458	6.678572715728777	AGCAATTAAC
chr2	120713896	120713897	chr2:120713897:C:T	rs75914160	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	121075458	121075459	chr2:121075459:T:C	rs971361869	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	121075467	121075468	chr2:121075468:G:C	rs33925064	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.214270460494872	6.8288739775206295	GCTAATTAGG
chr2	121260913	121260914	chr2:121260914:T:A	rs74902675	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	121319868	121319869	chr2:121319869:C:T	rs75107863	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	121517733	121517734	chr2:121517734:C:G	rs76971393	C	G	c	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	121530817	121530818	chr2:121530818:A:G	rs139670629	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.300090444404122	4.467139493234421	GGTAATTAAT
chr2	121530830	121530831	chr2:121530831:C:G	rs72969386	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	121530838	121530839	chr2:121530839:T:C	rs79645684	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	121805968	121805969	chr2:121805969:G:A	rs73950827	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	122392959	122392960	chr2:122392960:C:A	rs7607285	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	123842591	123842592	chr2:123842592:C:T	rs13022662	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	123954091	123954092	chr2:123954092:C:T	rs1214078	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	123972594	123972595	chr2:123972595:G:A	rs960009	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	124165240	124165241	chr2:124165241:C:T	rs2699367	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	125581651	125581652	chr2:125581652:T:C	rs1839995	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	126254135	126254136	chr2:126254136:C:T	rs567888307	C	T	C	Hoxd3.mouse_homeodomain_1	6	1	-	6.220683642931706	4.715704985617274	GGTAATGAGC
chr2	126662806	126662807	chr2:126662807:G:A	rs13008527	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	126706375	126706376	chr2:126706376:G:A	rs10187088	G	A	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	126895259	126895260	chr2:126895260:C:G	rs7420828	C	G	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr2	127616124	127616125	chr2:127616125:G:A	rs13386395	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	128212580	128212581	chr2:128212581:C:T	rs6431003	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	128425131	128425132	chr2:128425132:C:T	rs183144821	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	128437981	128437982	chr2:128437982:A:G	rs72847806	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	128497963	128497964	chr2:128497964:A:C	rs705057	A	C	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	128629634	128629635	chr2:128629635:G:A	rs143614011	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	128704962	128704963	chr2:128704963:C:T	rs116786543	C	T	-	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	128791086	128791087	chr2:128791087:C:T	rs10201803	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr2	130062939	130062940	chr2:130062940:G:T	rs76907740	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	130064935	130064936	chr2:130064936:G:T	rs866597324	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	130072442	130072443	chr2:130072443:G:A	rs4493198	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.8337638605482685	7.374201862239223	GGCAATTAGG
chr2	132251849	132251850	chr2:132251850:A:G	rs142717186	A	G	.	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	132615586	132615587	chr2:132615587:G:A	rs74949772	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	132768044	132768045	chr2:132768045:G:C	rs57643329	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	133016742	133016743	chr2:133016743:T:G	rs1193376614	T	G	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	133016757	133016758	chr2:133016758:A:G	chr2:133016758:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	133393884	133393885	chr2:133393885:G:A	rs13417230	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	133833570	133833571	chr2:133833571:A:C	rs6430461	A	C	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	133849280	133849281	chr2:133849281:G:A	rs10928463	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.894837620138681	6.962953441130107	GCCAATTAAC
chr2	133887966	133887967	chr2:133887967:G:T	rs7595125	G	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	133946455	133946456	chr2:133946456:T:C	rs7560215	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	134072808	134072809	chr2:134072809:C:A	rs16830021	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr2	134479899	134479900	chr2:134479900:G:A	rs597299	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr2	134866437	134866438	chr2:134866438:A:C	rs3814358	A	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	135218927	135218928	chr2:135218928:A:G	rs4954228	A	G	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr2	136328536	136328537	chr2:136328537:C:T	rs4073037	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	136356550	136356551	chr2:136356551:G:A	rs11890732	G	A	g	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	136497353	136497354	chr2:136497354:C:A	rs1430352	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	137020942	137020943	chr2:137020943:T:C	rs13422653	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	137369311	137369312	chr2:137369312:A:C	rs2889099	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.122884842874458	5.807277106403617	AGCAATTAAC
chr2	138183338	138183339	chr2:138183339:T:C	rs35327050	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	138344437	138344438	chr2:138344438:T:C	rs78770686	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	138494386	138494387	chr2:138494387:T:C	rs11691283	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.678572715728777	4.689714813815595	AGCAATTACC
chr2	138637433	138637434	chr2:138637434:T:G	rs13407238	T	G	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	139587402	139587403	chr2:139587403:C:A	rs1446391	C	A	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	140039169	140039170	chr2:140039170:G:A	rs13429022	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	140737221	140737222	chr2:140737222:A:G	rs288121	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.448367377574026	3.5882709340132775	GGCAATTACG
chr2	142010948	142010949	chr2:142010949:C:T	rs1191974	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.063900836764708	6.396180070061307	CGTAATTAAG
chr2	142064462	142064463	chr2:142064463:A:C	rs181932680	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	143264852	143264853	chr2:143264853:T:C	rs2381403	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	144075020	144075021	chr2:144075021:G:A	rs72854142	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.685552352237077	6.017831585533677	CGCAATTAAC
chr2	145871106	145871107	chr2:145871107:G:C	chr2:145871107:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	147070093	147070094	chr2:147070094:G:A	rs78054668	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	147158021	147158022	chr2:147158022:C:G	rs10497009	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.503391442821062	7.663322844565413	ACTAATTAAC
chr2	147374378	147374379	chr2:147374379:T:C	rs16827260	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	147443046	147443047	chr2:147443047:T:C	rs72863554	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	148569134	148569135	chr2:148569135:G:A	rs13010027	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	148619558	148619559	chr2:148619559:A:T	rs114759108	A	T	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	149064665	149064666	chr2:149064666:C:T	rs13031038	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	149513083	149513084	chr2:149513084:C:T	rs79349911	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	149819435	149819436	chr2:149819436:T:C	rs78845755	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	150025893	150025894	chr2:150025894:C:T	rs115191803	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.277319169927424	6.34543499091885	GGTCATTAGG
chr2	150653889	150653890	chr2:150653890:G:C	rs13018941	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	151084321	151084322	chr2:151084322:T:C	rs1994259	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr2	151302989	151302990	chr2:151302990:G:A	rs6723298	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	151851099	151851100	chr2:151851100:G:A	rs16830418	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	152716385	152716386	chr2:152716386:A:G	rs79075002	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	152716428	152716429	chr2:152716429:G:A	rs17400736	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	153368217	153368218	chr2:153368218:G:A	rs13032435	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	153368245	153368246	chr2:153368246:A:G	rs146527736	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr2	155048592	155048593	chr2:155048593:T:G	rs62177108	T	G	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	155526889	155526890	chr2:155526890:A:G	rs1524910	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	155708292	155708293	chr2:155708293:C:T	rs1914648	C	T	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	155905791	155905792	chr2:155905792:G:C	rs3843321	G	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	156310259	156310260	chr2:156310260:C:T	rs16840214	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	156589237	156589238	chr2:156589238:G:A	rs1368248	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	156651319	156651320	chr2:156651320:C:T	rs114761677	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	156884102	156884103	chr2:156884103:T:A	chr2:156884103:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	158846018	158846019	chr2:158846019:T:G	rs145835089	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	158968190	158968191	chr2:158968191:C:G	rs72953161	C	G	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	159109093	159109094	chr2:159109094:C:T	rs396044	C	T	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	159571611	159571612	chr2:159571612:A:C	rs1425039	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr2	159736377	159736378	chr2:159736378:C:T	rs77363656	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	159760361	159760362	chr2:159760362:C:G	rs11681565	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	160074191	160074192	chr2:160074192:G:T	rs61377083	G	T	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	160110197	160110198	chr2:160110198:T:C	rs80247290	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	160110211	160110212	chr2:160110212:A:G	rs531333583	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.056921200256407	4.2239702490867055	AGTAATTACG
chr2	161134813	161134814	chr2:161134814:G:C	rs3754979	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	162582762	162582763	chr2:162582763:T:A	rs11888977	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	163062629	163062630	chr2:163062630:G:A	rs1873201	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	6.277319169927424	5.892419488165814	GGTCATTAGG
chr2	163077504	163077505	chr2:163077505:T:C	rs76283593	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	163473026	163473027	chr2:163473027:C:A	rs142447034	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	164009741	164009742	chr2:164009742:T:C	chr2:164009742:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	165313562	165313563	chr2:165313563:A:G	rs13025009	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.904037796958669	6.835921975967242	ACCAATTAGC
chr2	166171330	166171331	chr2:166171331:A:G	rs4667881	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	166941587	166941588	chr2:166941588:G:A	rs114278293	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	166941592	166941593	chr2:166941593:T:C	rs1511200	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	167198485	167198486	chr2:167198486:G:A	rs73970887	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.450525492992999	6.518641313984426	GCCAATTACC
chr2	168233687	168233688	chr2:168233688:C:T	rs10181180	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	168434272	168434273	chr2:168434273:G:A	rs77401324	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	168543257	168543258	chr2:168543258:C:T	rs17202645	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	168686330	168686331	chr2:168686331:G:A	rs115013769	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr2	168693722	168693723	chr2:168693723:G:A	rs62174421	G	A	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	169302624	169302625	chr2:169302625:C:A	rs145055775	C	A	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	169354494	169354495	chr2:169354495:G:T	rs80051453	G	T	g	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	169670452	169670453	chr2:169670453:A:C	rs2166576	A	C	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	170080335	170080336	chr2:170080336:G:A	rs79762944	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	170340813	170340814	chr2:170340814:T:C	rs73975606	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	170340839	170340840	chr2:170340840:C:T	rs3088022	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	6.892679504719707	6.224958738016306	GGCAATTAAG
chr2	170576005	170576006	chr2:170576006:A:T	rs4667646	A	T	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	170666312	170666313	chr2:170666313:T:C	rs4643506	T	C	t	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	170668390	170668391	chr2:170668391:T:C	rs1157200	T	C	c	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	171816942	171816943	chr2:171816943:G:A	rs6716901	G	A	g	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	171852704	171852705	chr2:171852705:G:C	rs3770444	G	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	172198387	172198388	chr2:172198388:A:G	rs35482192	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	172198540	172198541	chr2:172198541:G:T	rs6720175	G	T	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	172336559	172336560	chr2:172336560:A:G	rs67153018	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	172415551	172415552	chr2:172415552:G:A	rs17726833	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr2	172434267	172434268	chr2:172434268:T:C	rs10184567	T	C	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	172972103	172972104	chr2:172972104:G:A	rs184457794	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	173238431	173238432	chr2:173238432:T:C	rs3739103	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.341301925657738	4.508350974488036	ACTAATTAAG
chr2	173288280	173288281	chr2:173288281:C:T	rs11884211	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	173405522	173405523	chr2:173405523:G:A	rs1020013	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	173573233	173573234	chr2:173573234:C:T	rs12619702	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	174197288	174197289	chr2:174197289:G:A	rs10191904	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr2	174331471	174331472	chr2:174331472:G:T	rs13407196	G	T	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr2	175168823	175168824	chr2:175168824:C:G	rs1453201238	C	G	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	175575987	175575988	chr2:175575988:A:C	rs4075842	A	C	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	175627598	175627599	chr2:175627599:G:A	rs4297847	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.44231768323065	7.501233327402089	AGTAATTAGG
chr2	176089382	176089383	chr2:176089383:A:G	rs847201	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	176704641	176704642	chr2:176704642:T:C	rs4411740	T	C	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.341301925657738	6.800863923966783	ACTAATTAAG
chr2	176843442	176843443	chr2:176843443:C:T	rs1513878	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.732748102975356	6.800863923966783	GCCAATTAAG
chr2	177030539	177030540	chr2:177030540:C:G	rs13012236	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	177077177	177077178	chr2:177077178:C:T	rs2056776	C	T	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	178414235	178414236	chr2:178414236:C:G	rs536253262	C	G	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	179048865	179048866	chr2:179048866:C:T	rs12467652	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	179800960	179800961	chr2:179800961:A:G	rs6735731	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr2	180046690	180046691	chr2:180046691:T:A	rs6708640	T	A	.	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	180707732	180707733	chr2:180707733:G:A	rs1528434	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	181129610	181129611	chr2:181129611:T:C	rs62178855	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	181194654	181194655	chr2:181194655:A:G	rs4439920	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	181280664	181280665	chr2:181280665:C:T	rs78111114	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	181280681	181280682	chr2:181280682:A:G	rs62180208	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	181516322	181516323	chr2:181516323:A:G	rs1375491	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	181773418	181773419	chr2:181773419:T:C	rs11901603	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	182088182	182088183	chr2:182088183:A:C	rs1196149	A	C	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	182404236	182404237	chr2:182404237:A:T	rs16823168	A	T	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	183227385	183227386	chr2:183227386:T:C	rs17707596	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	183488170	183488171	chr2:183488171:C:T	rs7423581	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr2	186561819	186561820	chr2:186561820:A:G	rs111752699	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr2	186589547	186589548	chr2:186589548:G:A	rs61763601	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	186694600	186694601	chr2:186694601:C:G	rs544136605	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	186827577	186827578	chr2:186827578:T:C	rs12616053	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.2190107174197315	4.358914273858985	AGTAATTACC
chr2	187371551	187371552	chr2:187371552:G:A	rs72902452	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr2	187448789	187448790	chr2:187448790:C:G	rs111638822	C	G	c	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	187528212	187528213	chr2:187528213:G:A	rs4667168	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	189150337	189150338	chr2:189150338:C:G	rs17198780	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr2	189150359	189150360	chr2:189150360:A:G	rs79532642	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	189380091	189380092	chr2:189380092:A:G	rs188907415	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	189658436	189658437	chr2:189658437:C:A	rs12622938	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	189784589	189784590	chr2:189784590:G:C	rs5742933	G	C	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	190699264	190699265	chr2:190699265:T:C	rs10202868	T	C	t	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr2	191334255	191334256	chr2:191334256:G:A	rs540639424	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	191465836	191465837	chr2:191465837:G:A	rs16833749	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	191666141	191666142	chr2:191666142:G:A	rs10192623	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	5.898970685399792	5.957886329571231	GGCCATTAGC
chr2	191812227	191812228	chr2:191812228:G:A	rs555052459	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	192586115	192586116	chr2:192586116:T:C	rs6434566	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.054769021883032	0.21421179746437194	GGCAATTAAC
chr2	193512803	193512804	chr2:193512804:G:A	rs1440059	G	A	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr2	195899058	195899059	chr2:195899059:G:A	rs17361373	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	196219862	196219863	chr2:196219863:T:C	rs1531113	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	196219870	196219871	chr2:196219871:T:C	rs1531114	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	7.374201862239223	0.5336446378205636	GGTAATTAGG
chr2	196377372	196377373	chr2:196377373:C:T	rs61644428	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	196875546	196875547	chr2:196875547:A:T	rs73064958	A	T	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr2	197245991	197245992	chr2:197245992:T:C	rs79324735	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.277319169927424	2.1207597685908133	GGTCATTAGG
chr2	198029202	198029203	chr2:198029203:A:G	rs16826740	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	198061255	198061256	chr2:198061256:A:G	rs1866665	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	198297247	198297248	chr2:198297248:T:C	rs13423739	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.525620950492726	3.6655245069319795	CCCAATTAAC
chr2	198717854	198717855	chr2:198717855:G:A	rs4675232	G	A	-	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	199739557	199739558	chr2:199739558:A:G	rs6435033	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	200279068	200279069	chr2:200279069:C:T	rs62179500	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	200584718	200584719	chr2:200584719:C:A	rs12621063	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	201153211	201153212	chr2:201153212:G:A	rs113862538	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	201769324	201769325	chr2:201769325:A:G	rs7569542	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	201769334	201769335	chr2:201769335:A:T	rs150213250	A	T	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	201883716	201883717	chr2:201883717:C:T	rs112621228	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	201974591	201974592	chr2:201974592:T:C	rs10180195	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	201974595	201974596	chr2:201974596:C:T	rs2160317	C	T	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	202094944	202094945	chr2:202094945:G:A	rs74327180	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	202639300	202639301	chr2:202639301:T:G	rs57192149	T	G	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	203127212	203127213	chr2:203127213:T:G	rs11689534	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	203240998	203240999	chr2:203240999:G:T	rs368588310	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	203562616	203562617	chr2:203562617:A:G	rs10174652	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	204276081	204276082	chr2:204276082:G:A	rs723021	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	204880833	204880834	chr2:204880834:G:A	rs7586528	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	+	7.2190107174197315	6.551289950716331	AGTAATTACC
chr2	204890960	204890961	chr2:204890961:C:T	rs16836720	C	T	c	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	205141859	205141860	chr2:205141860:G:A	rs76187387	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.273186104666311	6.7490466830965	GCTAATTAAG
chr2	205192924	205192925	chr2:205192925:T:C	rs10932098	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	205381409	205381410	chr2:205381410:C:T	rs35435713	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.007267207914503	6.339546441211103	TGTAATTAGC
chr2	205670590	205670591	chr2:205670591:C:T	rs75697811	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	205855593	205855594	chr2:205855594:T:C	rs13017212	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	205858950	205858951	chr2:205858951:C:T	rs79414420	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr2	205858966	205858967	chr2:205858967:C:T	rs62194997	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	206176328	206176329	chr2:206176329:T:C	rs3732083	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.282386281486299	0.4418290570676392	ACTAATTAGG
chr2	206176347	206176348	chr2:206176348:G:A	rs1234441605	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr2	206887169	206887170	chr2:206887170:A:G	rs1530941	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	207031469	207031470	chr2:207031470:T:C	rs114752262	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	207112805	207112806	chr2:207112806:T:C	rs13015463	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr2	207235715	207235716	chr2:207235716:C:T	rs55917969	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.277319169927424	6.34543499091885	GGTCATTAGG
chr2	207274525	207274526	chr2:207274526:A:G	rs183654344	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr2	207546931	207546932	chr2:207546932:T:C	rs56075788	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	207702964	207702965	chr2:207702965:T:C	rs13401308	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	207969752	207969753	chr2:207969753:C:T	rs11679492	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	207969766	207969767	chr2:207969767:C:T	rs78972205	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	208013904	208013905	chr2:208013905:T:G	rs4673377	T	G	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	208015444	208015445	chr2:208015445:C:T	rs114187107	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	208046131	208046132	chr2:208046132:G:A	rs17598650	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	208046183	208046184	chr2:208046184:T:C	rs10193505	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	208698776	208698777	chr2:208698777:T:G	rs79394453	T	G	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	210443673	210443674	chr2:210443674:T:C	rs115110199	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr2	211107127	211107128	chr2:211107128:T:A	rs319728	T	A	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	211351218	211351219	chr2:211351219:C:T	rs12468497	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	211367468	211367469	chr2:211367469:C:A	rs147955626	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr2	211824224	211824225	chr2:211824225:C:G	rs75734424	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	211824238	211824239	chr2:211824239:C:A	rs12475812	C	A	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	211824875	211824876	chr2:211824876:G:A	rs4672628	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	212218600	212218601	chr2:212218601:C:G	rs10048796	C	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	212452187	212452188	chr2:212452188:C:T	rs972488	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.277319169927424	6.336234814098862	GGTCATTAGG
chr2	213237221	213237222	chr2:213237222:G:T	rs545387917	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	213251936	213251937	chr2:213251937:T:C	rs75622926	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.122884842874458	7.054769021883032	AGCAATTAAC
chr2	213265915	213265916	chr2:213265916:A:C	rs2708150	A	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	213648422	213648423	chr2:213648423:G:A	rs6435780	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	214519526	214519527	chr2:214519527:A:G	rs4673851	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	214588251	214588252	chr2:214588252:A:G	rs4672715	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	215272106	215272107	chr2:215272107:G:C	rs9973381	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.960795325711134	7.122884842874458	AGCAATTAAG
chr2	215605061	215605062	chr2:215605062:C:T	rs11679224	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr2	216596529	216596530	chr2:216596530:G:A	rs937954288	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	216849549	216849550	chr2:216849550:T:G	rs56142049	T	G	t	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr2	217092975	217092976	chr2:217092976:G:T	rs72951831	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	5.898970685399792	5.351981486474858	GGCCATTAGC
chr2	217394579	217394580	chr2:217394580:A:G	rs73079614	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	217489363	217489364	chr2:217489364:T:G	rs874839	T	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	218406209	218406210	chr2:218406210:G:T	rs147404275	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	219253808	219253809	chr2:219253809:G:C	rs939574	G	C	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	219526080	219526081	chr2:219526081:G:A	rs3770232	G	A	g	Hoxd3.mouse_homeodomain_1	9	1	-	6.995853377711593	6.700736798541729	GGCAATTAGC
chr2	219566085	219566086	chr2:219566086:C:T	rs6706418	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr2	219691575	219691576	chr2:219691576:G:A	rs11686314	G	A	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	219719140	219719141	chr2:219719141:G:A	rs6735660	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	220078001	220078002	chr2:220078002:C:T	rs16860804	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	220188518	220188519	chr2:220188519:A:C	rs10174847	A	C	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	220902566	220902567	chr2:220902567:C:G	rs34569896	C	G	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.122884842874458	3.7562277864644793	AGCAATTAAC
chr2	220922139	220922140	chr2:220922140:A:C	rs749635	A	C	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.466705306321288	5.369822614009488	CCCAATTAGC
chr2	221241024	221241025	chr2:221241025:T:A	rs77679016	T	A	t	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr2	222447412	222447413	chr2:222447413:T:A	rs3856550	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	222899767	222899768	chr2:222899768:A:C	rs189399096	A	C	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr2	223214893	223214894	chr2:223214894:T:C	rs66487148	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	223225842	223225843	chr2:223225843:G:T	rs34502862	G	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.214270460494872	6.706481095535822	GCTAATTAGG
chr2	223285064	223285065	chr2:223285065:C:T	rs1607248	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	223776851	223776852	chr2:223776852:C:T	rs10498154	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	224084512	224084513	chr2:224084513:A:G	rs73992381	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	224100440	224100441	chr2:224100441:A:G	rs1453664	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr2	224151768	224151769	chr2:224151769:G:A	rs12619528	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr2	224417441	224417442	chr2:224417442:C:T	rs59249189	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	224816836	224816837	chr2:224816837:G:C	rs13406583	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	225616020	225616021	chr2:225616021:C:G	rs2396247	C	G	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	226432629	226432630	chr2:226432630:A:G	rs114710433	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	226467477	226467478	chr2:226467478:G:C	rs6758491	G	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	226801940	226801941	chr2:226801941:A:C	rs62190995	A	C	C	Hoxd3.mouse_homeodomain_1	4	1	+	7.663322844565413	5.21416737429056	AGTAATTAAC
chr2	227507075	227507076	chr2:227507076:A:G	rs4075127	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	227872096	227872097	chr2:227872097:G:C	rs113102184	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	227872109	227872110	chr2:227872110:T:C	rs56359270	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr2	227972043	227972044	chr2:227972044:A:G	rs12478290	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.894837620138681	4.034741176577933	GCCAATTAAC
chr2	228115184	228115185	chr2:228115185:G:A	rs10209576	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	228141361	228141362	chr2:228141362:C:T	rs4246656	C	T	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr2	228875262	228875263	chr2:228875263:C:G	rs187195025	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	229340316	229340317	chr2:229340317:C:T	rs17483170	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	229340319	229340320	chr2:229340320:A:C	rs74001832	A	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr2	230124870	230124871	chr2:230124871:A:G	rs139729491	A	G	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	230124882	230124883	chr2:230124883:A:G	rs144388979	A	G	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.663322844565413	7.604407200393974	AGTAATTAAC
chr2	230447424	230447425	chr2:230447425:G:A	rs1156156	G	A	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	230651254	230651255	chr2:230651255:T:C	rs13394080	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	230678460	230678461	chr2:230678461:T:C	rs138326240	T	C	t	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	230678462	230678463	chr2:230678463:G:A	rs114917080	G	A	g	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	230974143	230974144	chr2:230974144:C:T	rs79254452	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	231222671	231222672	chr2:231222672:A:G	rs114992710	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	231242649	231242650	chr2:231242650:G:T	rs12612219	G	T	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr2	231465290	231465291	chr2:231465291:C:A	rs111373950	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.732748102975356	6.224958738016306	GCCAATTAAG
chr2	232414154	232414155	chr2:232414155:T:G	rs11883916	T	G	t	Hoxd3.mouse_homeodomain_1	6	1	+	7.501233327402089	6.185625590931247	AGTAATTAAG
chr2	232854166	232854167	chr2:232854167:T:C	rs2044450	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	232854193	232854194	chr2:232854194:A:G	chr2:232854194:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr2	233022921	233022922	chr2:233022922:G:C	rs4973594	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	233100274	233100275	chr2:233100275:A:G	rs57371118	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	233152983	233152984	chr2:233152984:T:C	rs36149367	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	233729060	233729061	chr2:233729061:T:C	rs3806596	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	233858097	233858098	chr2:233858098:T:A	rs502321	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	234147667	234147668	chr2:234147668:C:A	rs74710836	C	A	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	234451616	234451617	chr2:234451617:T:C	rs6431261	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	5.898970685399792	3.0388742418390455	GGCCATTAGC
chr2	234492369	234492370	chr2:234492370:T:G	rs113995326	T	G	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	234492375	234492376	chr2:234492376:G:A	rs3115360	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.960795325711134	6.293074559007732	AGCAATTAAG
chr2	234515807	234515808	chr2:234515808:C:A	rs114983468	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	234686153	234686154	chr2:234686154:T:A	rs4663471	T	A	A	Hoxd3.mouse_homeodomain_1	7	1	-	6.8337638605482685	4.313153497194091	GGCAATTAGG
chr2	234695766	234695767	chr2:234695767:T:C	rs4663479	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	234970675	234970676	chr2:234970676:C:T	rs11684191	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr2	234970678	234970679	chr2:234970679:C:T	rs78257183	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr2	234970679	234970680	chr2:234970680:G:C	rs11695168	G	C	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr2	234983180	234983181	chr2:234983181:G:A	rs73124240	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	234983189	234983190	chr2:234983190:A:C	rs73124242	A	C	C	Hoxd3.mouse_homeodomain_1	7	1	+	6.450525492992999	2.6100263164409316	GCCAATTACC
chr2	235062370	235062371	chr2:235062371:A:G	rs73995784	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	235146444	235146445	chr2:235146445:A:G	rs7599082	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	235158981	235158982	chr2:235158982:T:C	rs72975353	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr2	235279100	235279101	chr2:235279101:C:T	rs116256981	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	235287419	235287420	chr2:235287420:G:C	rs150688665	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	235305362	235305363	chr2:235305363:G:A	rs13020554	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	235341939	235341940	chr2:235341940:A:G	rs4663195	A	G	g	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr2	235613804	235613805	chr2:235613805:G:A	rs184749032	G	A	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	236114146	236114147	chr2:236114147:A:G	rs3768925	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr2	236169249	236169250	chr2:236169250:T:C	rs10183276	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr2	236237257	236237258	chr2:236237258:T:C	rs73999263	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr2	236238953	236238954	chr2:236238954:C:T	rs72976618	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	236601028	236601029	chr2:236601029:C:T	rs754672360	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr2	236659811	236659812	chr2:236659812:T:G	chr2:236659812:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	236846043	236846044	chr2:236846044:C:G	rs76540753	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	236922365	236922366	chr2:236922366:T:G	rs58605652	T	G	G	Hoxd3.mouse_homeodomain_1	3	1	-	6.685552352237077	5.588669659925277	CGCAATTAAC
chr2	237305023	237305024	chr2:237305024:G:A	rs1391107	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	237393818	237393819	chr2:237393819:G:A	rs75829173	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	238250906	238250907	chr2:238250907:G:A	rs13408069	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	238338005	238338006	chr2:238338006:G:A	rs13398327	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr2	238581724	238581725	chr2:238581725:A:G	rs10754946	A	G	G	Hoxd3.mouse_homeodomain_1	5	1	-	7.241174800232684	0.40061757581402435	GGTAATTAGT
chr2	238966317	238966318	chr2:238966318:A:G	rs7585332	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.300090444404122	4.467139493234421	GGTAATTAAT
chr2	239147806	239147807	chr2:239147807:C:A	rs2100171	C	A	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr2	239199051	239199052	chr2:239199052:A:G	rs3791581	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	239471215	239471216	chr2:239471216:C:G	rs144021873	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	239629739	239629740	chr2:239629740:T:A	rs11693365	T	A	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	239692724	239692725	chr2:239692725:G:A	rs142654754	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	239725461	239725462	chr2:239725462:G:A	rs114773127	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	239778727	239778728	chr2:239778728:G:A	rs187257469	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	239810945	239810946	chr2:239810946:T:C	rs12712298	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	239810960	239810961	chr2:239810961:T:C	rs35953181	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.700736798541729	3.8677858473720272	GGCAATTAGT
chr2	239962875	239962876	chr2:239962876:C:T	rs4567966	C	T	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr2	240155826	240155827	chr2:240155827:G:T	chr2:240155827:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	5.898970685399792	5.351981486474858	GGCCATTAGC
chr2	240561262	240561263	chr2:240561263:G:T	rs192055093	G	T	g	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	240561290	240561291	chr2:240561291:G:A	rs76363789	G	A	g	Hoxd3.mouse_homeodomain_1	8	1	+	5.898970685399792	5.957886329571231	GGCCATTAGC
chr2	240827723	240827724	chr2:240827724:C:T	rs6755741	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr2	241010001	241010002	chr2:241010002:A:C	rs551258853	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr2	241010011	241010012	chr2:241010012:C:A	rs761676426	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.8337638605482685	6.149693037234106	GGCAATTAGG
chr2	241174097	241174098	chr2:241174098:A:G	rs6437244	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr2	241257679	241257680	chr2:241257680:C:T	rs4675973	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	241257691	241257692	chr2:241257692:C:G	rs62186372	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.525620950492726	6.363531433329402	CCCAATTAAC
chr2	241503961	241503962	chr2:241503962:G:A	rs35172632	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	241927559	241927560	chr2:241927560:C:T	rs116033259	C	T	.	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	400796	400797	chr20:400797:T:C	rs6084330	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.595207023573987	3.4386476222373767	GGTAATTAAC
chr20	848540	848541	chr20:848541:G:A	rs7266588	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr20	967748	967749	chr20:967749:C:T	rs369154936	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	986985	986986	chr20:986986:G:T	rs80189888	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	986990	986991	chr20:986991:C:T	rs6039401	C	T	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	1213061	1213062	chr20:1213062:G:A	rs118080645	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	1213072	1213073	chr20:1213073:A:G	chr20:1213073:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	1374115	1374116	chr20:1374116:T:G	rs73079666	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr20	1399865	1399866	chr20:1399866:T:A	rs191047237	T	A	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.054769021883032	3.278069900065963	GGCAATTAAC
chr20	1435148	1435149	chr20:1435149:A:G	rs6042268	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr20	1466047	1466048	chr20:1466048:A:G	rs116832887	A	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	1855139	1855140	chr20:1855140:A:G	rs156345	A	G	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr20	2009012	2009013	chr20:2009013:G:A	rs1418043	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr20	2010830	2010831	chr20:2010831:C:T	rs2050213	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr20	2101383	2101384	chr20:2101384:A:T	rs6136990	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	2108778	2108779	chr20:2108779:G:T	rs188965426	G	T	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	2145920	2145921	chr20:2145921:T:C	rs2153742	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	2319370	2319371	chr20:2319371:G:A	rs214818	G	A	a	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	2814041	2814042	chr20:2814042:A:G	rs6515745	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.277319169927424	3.4172227263666755	GGTCATTAGG
chr20	2840189	2840190	chr20:2840190:G:T	rs529759848	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	2840223	2840224	chr20:2840224:T:C	rs150630425	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	2873063	2873064	chr20:2873064:A:G	rs904552092	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr20	2982356	2982357	chr20:2982357:G:A	rs144026130	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr20	3102645	3102646	chr20:3102646:A:G	rs75128280	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	-	7.007267207914503	7.167074709756593	TGTAATTAGC
chr20	3316205	3316206	chr20:3316206:C:A	rs750196047	C	A	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	3483652	3483653	chr20:3483653:G:A	rs151558	G	A	a	Hoxd3.mouse_homeodomain_1	8	1	+	6.466705306321288	6.525620950492726	CCCAATTAGC
chr20	3563568	3563569	chr20:3563569:G:A	rs237640	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.122884842874458	6.827768263704594	AGCAATTAAC
chr20	3727570	3727571	chr20:3727571:T:G	rs73080437	T	G	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.700736798541729	4.251581328266876	GGCAATTAGT
chr20	3808968	3808969	chr20:3808969:C:T	rs550724192	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	3814098	3814099	chr20:3814099:T:C	rs57234894	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr20	3963502	3963503	chr20:3963503:T:C	rs73086535	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr20	4053833	4053834	chr20:4053834:T:A	rs34904346	T	A	t	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr20	4107678	4107679	chr20:4107679:C:A	rs11699209	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	4107679	4107680	chr20:4107680:A:G	rs78804135	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	4108605	4108606	chr20:4108606:G:A	rs41436649	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr20	4367770	4367771	chr20:4367771:T:C	rs17316050	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.214270460494872	4.381319509325171	GCTAATTAGG
chr20	4367792	4367793	chr20:4367793:T:C	rs159786	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr20	4702344	4702345	chr20:4702345:T:C	rs7264175	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	4716707	4716708	chr20:4716708:T:C	rs6052790	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr20	4841014	4841015	chr20:4841015:A:C	rs4813722	A	C	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	5056377	5056378	chr20:5056378:G:A	rs261362	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	5180513	5180514	chr20:5180514:T:G	rs6053177	T	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	5298551	5298552	chr20:5298552:A:G	rs927101	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.989302180477614	4.156351229307912	GGTAATTAGA
chr20	5299007	5299008	chr20:5299008:T:C	rs927104	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	5393605	5393606	chr20:5393606:A:G	rs6076827	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	5410638	5410639	chr20:5410639:A:T	rs1980585	A	T	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr20	5608927	5608928	chr20:5608928:G:A	rs75324185	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.300090444404122	6.632369677700721	GGTAATTAAT
chr20	5608935	5608936	chr20:5608936:T:C	rs17211175	T	C	T	Hoxd3.mouse_homeodomain_1	9	1	+	7.300090444404122	7.595207023573987	GGTAATTAAT
chr20	5846409	5846410	chr20:5846410:A:G	rs369153956	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	5846414	5846415	chr20:5846415:G:A	rs6053740	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	5846417	5846418	chr20:5846418:T:A	chr20:5846418:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	6051361	6051362	chr20:6051362:T:C	rs6053850	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	6051364	6051365	chr20:6051365:G:A	rs766227414	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	6637311	6637312	chr20:6637312:T:C	rs6085635	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	6700689	6700690	chr20:6700690:A:G	rs1051776434	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.678572715728777	4.689714813815595	AGCAATTACC
chr20	6700700	6700701	chr20:6700701:A:G	rs11908680	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	7226831	7226832	chr20:7226832:A:C	rs4140470	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.341301925657738	4.341915965695273	ACTAATTAAG
chr20	7649960	7649961	chr20:7649961:C:T	rs6055225	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	8294408	8294409	chr20:8294409:G:A	rs6086393	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	8390397	8390398	chr20:8390398:A:G	rs1232778	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	8449414	8449415	chr20:8449415:A:G	rs227132	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	8624656	8624657	chr20:8624657:A:G	rs8126070	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	8671068	8671069	chr20:8671069:C:A	rs73078021	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr20	8671114	8671115	chr20:8671115:G:A	rs73597540	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	9309178	9309179	chr20:9309179:A:G	rs6108280	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.433117506410662	0.5925602819920024	GGTAATTAAG
chr20	10185749	10185750	chr20:10185750:C:A	rs944873	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr20	10291843	10291844	chr20:10291844:G:A	rs362592	G	A	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	10301084	10301085	chr20:10301085:T:A	chr20:10301085:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr20	10506999	10507000	chr20:10507000:A:G	rs659785	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr20	10552360	10552361	chr20:10552361:A:C	chr20:10552361:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	10667030	10667031	chr20:10667031:A:G	rs1883801	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	10675011	10675012	chr20:10675012:C:A	rs73243790	C	A	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	10825322	10825323	chr20:10825323:G:C	rs16991992	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr20	10995192	10995193	chr20:10995193:T:C	rs6108793	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	11266903	11266904	chr20:11266904:A:G	rs6033076	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr20	11352130	11352131	chr20:11352131:G:A	rs6108924	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	5.736881168236468	5.7957968124079065	GGCCATTAGG
chr20	11777874	11777875	chr20:11777875:T:C	rs114507656	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	11851866	11851867	chr20:11851867:T:C	rs2795025	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.44231768323065	7.374201862239223	AGTAATTAGG
chr20	11867565	11867566	chr20:11867566:C:T	rs2144351	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	12988448	12988449	chr20:12988449:T:C	rs752732026	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	13059605	13059606	chr20:13059606:G:T	rs4814194	G	T	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr20	13212289	13212290	chr20:13212290:G:A	chr20:13212290:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr20	13334911	13334912	chr20:13334912:A:G	rs67609124	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	14360932	14360933	chr20:14360933:G:A	rs6074721	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	14646198	14646199	chr20:14646199:C:A	rs1932935	C	A	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr20	14956605	14956606	chr20:14956606:G:T	rs117057989	G	T	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	15337867	15337868	chr20:15337868:T:G	rs1424000425	T	G	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr20	15424976	15424977	chr20:15424977:A:G	rs13036384	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr20	16284167	16284168	chr20:16284168:G:C	rs6080202	G	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr20	16296021	16296022	chr20:16296022:A:G	rs6514671	A	G	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	16314728	16314729	chr20:16314729:C:G	rs6043882	C	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.604407200393974	7.2190107174197315	AGTAATTAGC
chr20	16395648	16395649	chr20:16395649:T:C	rs56368069	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	17104847	17104848	chr20:17104848:A:C	rs852033	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	17270887	17270888	chr20:17270888:G:C	rs59960696	G	C	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	17311583	17311584	chr20:17311584:A:T	rs78250141	A	T	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	17902886	17902887	chr20:17902887:C:A	rs8125763	C	A	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr20	17970493	17970494	chr20:17970494:G:C	rs57043205	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.663322844565413	7.503391442821062	AGTAATTAAC
chr20	18504578	18504579	chr20:18504579:C:A	rs532939117	C	A	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	18587398	18587399	chr20:18587399:G:T	rs6132086	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr20	18831729	18831730	chr20:18831730:A:G	rs17811095	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.741948279795344	3.881851836234596	ACCAATTAGG
chr20	19275949	19275950	chr20:19275950:C:A	rs186459924	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr20	19882917	19882918	chr20:19882918:A:G	rs6046404	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr20	20233185	20233186	chr20:20233186:G:C	rs6515091	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr20	20440504	20440505	chr20:20440505:C:G	rs73122473	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr20	22490127	22490128	chr20:22490128:T:C	rs543732433	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	23025689	23025690	chr20:23025690:G:A	rs2092635	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.516483198565452	6.166709648865523	AGCAATTACG
chr20	23025709	23025710	chr20:23025710:G:T	rs2092636	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	23128497	23128498	chr20:23128498:C:A	rs117530969	C	A	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	23269050	23269051	chr20:23269051:G:A	rs6137878	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr20	23323538	23323539	chr20:23323539:C:T	rs2405229	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	23348384	23348385	chr20:23348385:C:T	rs6036388	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr20	23650961	23650962	chr20:23650962:C:G	rs73102363	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr20	23650964	23650965	chr20:23650965:A:G	rs73102364	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr20	24235676	24235677	chr20:24235677:A:G	rs2644845	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.466705306321288	2.3101459049846778	CCCAATTAGC
chr20	24445653	24445654	chr20:24445654:C:A	rs567766598	C	A	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	24447176	24447177	chr20:24447177:C:T	rs6049698	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	24605746	24605747	chr20:24605747:T:G	rs12480522	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	24771589	24771590	chr20:24771590:A:C	rs6132764	A	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr20	24910308	24910309	chr20:24910309:C:T	rs1029033	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	7.501233327402089	7.116333645640479	AGTAATTAAG
chr20	25077061	25077062	chr20:25077062:G:A	rs6083734	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	25459733	25459734	chr20:25459734:A:G	rs67679582	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	25519851	25519852	chr20:25519852:T:C	rs6050658	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.604407200393974	7.0639691987030195	AGTAATTAGC
chr20	25585093	25585094	chr20:25585094:C:T	rs113775785	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.220683642931706	5.552962876228305	GGTAATGAGC
chr20	25624890	25624891	chr20:25624891:A:G	rs16987934	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	25624913	25624914	chr20:25624914:C:T	rs6037164	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.450525492992999	6.155408913823135	GCCAATTACC
chr20	29331190	29331191	chr20:29331191:C:T	rs878984870	C	T	.	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr20	29761627	29761628	chr20:29761628:G:A	rs4114200	G	A	.	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	32127246	32127247	chr20:32127247:G:A	rs6058528	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	7.167074709756593	6.499353943053193	CGTAATTAGC
chr20	32536406	32536407	chr20:32536407:G:C	rs536647333	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr20	32536414	32536415	chr20:32536415:T:C	rs555007806	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.507524508082175	2.350965106745565	AGTCATTAGC
chr20	32536416	32536417	chr20:32536417:A:C	rs570126409	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.507524508082175	3.5081385481197103	AGTCATTAGC
chr20	32561568	32561569	chr20:32561569:C:T	rs6119266	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	32563898	32563899	chr20:32563899:G:A	rs6119899	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	32727772	32727773	chr20:32727773:C:T	rs117746404	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr20	32806539	32806540	chr20:32806540:C:T	rs73260147	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.277319169927424	5.2847045304086455	GGTCATTAGG
chr20	32813921	32813922	chr20:32813922:C:T	rs431066	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	32813929	32813930	chr20:32813930:T:C	rs401394	T	C	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	33249750	33249751	chr20:33249751:C:T	rs6057784	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr20	33725672	33725673	chr20:33725673:C:T	rs6059430	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr20	34938694	34938695	chr20:34938695:C:G	rs559108212	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	35117084	35117085	chr20:35117085:T:C	rs6142299	T	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	35176828	35176829	chr20:35176829:C:G	rs9574	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr20	35436181	35436182	chr20:35436182:A:G	rs224333	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	35743131	35743132	chr20:35743132:G:C	rs143636108	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	6.620085510831659	GGTAATTAGA
chr20	36847057	36847058	chr20:36847058:C:T	rs12106168	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	37231884	37231885	chr20:37231885:T:A	rs2343034	T	A	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	37534384	37534385	chr20:37534385:T:C	rs140047525	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	37598221	37598222	chr20:37598222:A:G	rs910598	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr20	37598247	37598248	chr20:37598248:T:G	rs910597	T	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	37816086	37816087	chr20:37816087:C:T	rs55722198	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	38426137	38426138	chr20:38426138:T:C	rs752775	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.995853377711593	4.135756934150845	GGCAATTAGC
chr20	38686030	38686031	chr20:38686031:G:A	rs6027258	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.241240225091396	6.081432723249305	CGCAATTACC
chr20	38864932	38864933	chr20:38864933:A:G	rs208814	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	38927431	38927432	chr20:38927432:T:A	rs6028208	T	A	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	39066597	39066598	chr20:39066598:C:T	rs67147849	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	39066599	39066600	chr20:39066600:G:A	rs568257828	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr20	39195772	39195773	chr20:39195773:C:A	rs6129216	C	A	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr20	39349301	39349302	chr20:39349302:T:C	rs2869003	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr20	39491962	39491963	chr20:39491963:A:G	rs6129343	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr20	39775263	39775264	chr20:39775264:G:C	rs211513	G	C	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	39839533	39839534	chr20:39839534:G:C	rs211846	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	39853740	39853741	chr20:39853741:C:T	rs114485429	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	39954630	39954631	chr20:39954631:G:T	rs542873992	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	40262852	40262853	chr20:40262853:T:C	rs62210560	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.901879681539695	0.061322457121035234	AGCAATTAGG
chr20	40522072	40522073	chr20:40522073:A:T	rs6124244	A	T	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.44231768323065	6.8451776907511785	AGTAATTAGG
chr20	41508030	41508031	chr20:41508031:C:T	rs145895961	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr20	41552452	41552453	chr20:41552453:T:C	rs6102460	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.435275621829636	4.575179178268889	GCTAATTAAC
chr20	41599850	41599851	chr20:41599851:C:A	rs6102491	C	A	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr20	42433307	42433308	chr20:42433308:A:G	rs73123336	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr20	42441891	42441892	chr20:42441892:G:A	rs760703	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr20	43439471	43439472	chr20:43439472:A:T	rs12625896	A	T	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr20	43558917	43558918	chr20:43558918:C:A	rs751873341	C	A	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr20	43564140	43564141	chr20:43564141:C:T	rs1017419942	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.277319169927424	6.34543499091885	GGTCATTAGG
chr20	43915705	43915706	chr20:43915706:A:C	rs73908108	A	C	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.540805396797378	6.6738324588039175	GCCAATTAGT
chr20	43927862	43927863	chr20:43927863:T:C	rs73118230	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	44010262	44010263	chr20:44010263:G:A	rs6031292	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr20	44079826	44079827	chr20:44079827:G:A	rs6103609	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	44099997	44099998	chr20:44099998:T:C	rs6031378	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	44174095	44174096	chr20:44174096:C:T	rs6073358	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	44174120	44174121	chr20:44174121:C:T	rs4812791	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr20	44762613	44762614	chr20:44762614:G:A	rs79638430	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr20	45015389	45015390	chr20:45015390:T:C	rs2284272	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.44231768323065	6.901879681539695	AGTAATTAGG
chr20	45041883	45041884	chr20:45041884:A:G	chr20:45041884:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr20	45187951	45187952	chr20:45187952:T:C	rs1007137	T	C	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.122884842874458	7.0639691987030195	AGCAATTAAC
chr20	45291063	45291064	chr20:45291064:C:A	rs2743330	C	A	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	45291091	45291092	chr20:45291092:T:C	rs6104098	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	45291104	45291105	chr20:45291105:A:G	rs2743334	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr20	45519173	45519174	chr20:45519174:A:G	rs6017593	A	G	g	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	46133256	46133257	chr20:46133257:T:C	rs1883838	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.845053790848919	0.004496566430259086	CCTAATTAGG
chr20	46146434	46146435	chr20:46146435:G:A	rs149322221	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.439408687090748	6.507524508082175	GGTCATTAGC
chr20	46176923	46176924	chr20:46176924:T:C	rs534704052	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	46284002	46284003	chr20:46284003:G:A	rs4813017	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	46284004	46284005	chr20:46284005:C:T	rs4810493	C	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	46978213	46978214	chr20:46978214:G:C	rs6066150	G	C	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	47098116	47098117	chr20:47098117:G:A	rs188599956	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr20	47185055	47185056	chr20:47185056:A:C	rs8115769	A	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr20	47303042	47303043	chr20:47303043:C:T	rs6124993	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr20	47415069	47415070	chr20:47415070:C:G	rs17726408	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.241240225091396	6.61045689473735	CGCAATTACC
chr20	47782311	47782312	chr20:47782312:T:C	rs115576587	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.304615789157963	3.471664837988262	CCCAATTAGG
chr20	47809330	47809331	chr20:47809331:T:C	rs4810702	T	C	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr20	47857196	47857197	chr20:47857197:G:A	rs6090752	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.279477285346397	5.755337863776585	GCTCATTAGC
chr20	47857205	47857206	chr20:47857206:G:A	rs6094889	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	47858175	47858176	chr20:47858176:G:A	rs146419970	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	48030541	48030542	chr20:48030542:C:T	rs55920738	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	48633400	48633401	chr20:48633401:G:T	rs4128336	G	T	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	48633424	48633425	chr20:48633425:A:G	rs58400536	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.901879681539695	4.041783237978947	AGCAATTAGG
chr20	48702768	48702769	chr20:48702769:G:A	rs3827042	G	A	G	Hoxd3.mouse_homeodomain_1	3	1	-	6.279477285346397	5.286862645827619	GCTCATTAGC
chr20	48905006	48905007	chr20:48905007:A:C	rs4810884	A	C	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	49103848	49103849	chr20:49103849:G:C	rs6125551	G	C	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	49450351	49450352	chr20:49450352:C:G	rs118085064	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.995853377711593	6.61045689473735	GGCAATTAGC
chr20	49450368	49450369	chr20:49450369:A:G	rs62209195	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	49808480	49808481	chr20:49808481:G:A	rs4810987	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr20	49823647	49823648	chr20:49823648:A:G	rs112144705	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.894837620138681	4.034741176577933	GCCAATTAAC
chr20	49962708	49962709	chr20:49962709:T:G	rs60813083	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.732748102975356	5.417140366504515	GCCAATTAAG
chr20	50059828	50059829	chr20:50059829:G:A	rs760087713	G	A	g	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	50171597	50171598	chr20:50171598:C:G	chr20:50171598:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	50269193	50269194	chr20:50269194:C:A	rs138682868	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr20	50479635	50479636	chr20:50479636:C:T	rs6095968	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr20	51392414	51392415	chr20:51392415:C:A	rs4302264	C	A	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr20	51659786	51659787	chr20:51659787:T:G	rs2426355	T	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	51798211	51798212	chr20:51798212:T:G	rs6067941	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr20	51833585	51833586	chr20:51833586:G:T	rs117374538	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.892679504719707	6.7596524427131675	GGCAATTAAG
chr20	51833592	51833593	chr20:51833593:T:A	rs77594813	T	A	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr20	51860555	51860556	chr20:51860556:C:A	rs760191444	C	A	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.122884842874458	5.319850901910685	AGCAATTAAC
chr20	52049553	52049554	chr20:52049554:A:G	rs11699699	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	52119009	52119010	chr20:52119010:G:A	rs62216893	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr20	52768776	52768777	chr20:52768777:T:C	rs8116641	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr20	52978376	52978377	chr20:52978377:C:T	rs13042084	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr20	52995009	52995010	chr20:52995010:G:A	rs2248269	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr20	53059220	53059221	chr20:53059221:A:T	rs6126741	A	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr20	53104849	53104850	chr20:53104850:C:A	rs17390526	C	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	6.678572715728777	6.131583516803842	AGCAATTACC
chr20	53142381	53142382	chr20:53142382:A:C	rs1293417	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	53205218	53205219	chr20:53205219:G:C	rs147999522	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr20	53281829	53281830	chr20:53281830:T:C	rs73150626	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr20	53331116	53331117	chr20:53331117:G:A	rs200607	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr20	53692922	53692923	chr20:53692923:A:G	rs1296092501	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	53830064	53830065	chr20:53830065:C:A	rs56246963	C	A	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.066058952183682	7.503391442821062	CCTAATTAAC
chr20	53830080	53830081	chr20:53830081:T:C	rs78888037	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr20	54000136	54000137	chr20:54000137:G:T	rs74687089	G	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	54133163	54133164	chr20:54133164:T:G	rs1886308	T	G	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	54169866	54169867	chr20:54169867:T:C	rs2245153	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.277319169927424	3.4172227263666755	GGTCATTAGG
chr20	54606790	54606791	chr20:54606791:T:C	rs6014081	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	54640969	54640970	chr20:54640970:C:T	rs6091941	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr20	55415765	55415766	chr20:55415766:C:A	rs138954827	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.054769021883032	6.507779822958097	GGCAATTAAC
chr20	55928379	55928380	chr20:55928380:G:C	rs228984	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr20	55961333	55961334	chr20:55961334:A:G	rs1837026	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	56187919	56187920	chr20:56187920:G:A	rs6069634	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	56703193	56703194	chr20:56703194:G:A	rs911450	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr20	56717203	56717204	chr20:56717204:A:G	rs2426641	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	56722062	56722063	chr20:56722063:C:T	rs1275240256	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr20	56860543	56860544	chr20:56860544:G:A	rs73914048	G	A	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	57494348	57494349	chr20:57494349:C:A	chr20:57494349:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr20	57680625	57680626	chr20:57680626:C:T	rs62204322	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.845053790848919	6.320914369279107	CCTAATTAGG
chr20	57717090	57717091	chr20:57717091:C:T	rs76621877	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	57719494	57719495	chr20:57719495:G:A	rs55997418	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.525620950492726	6.001481528922915	CCCAATTAAC
chr20	57907605	57907606	chr20:57907606:C:T	rs437420	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	57970503	57970504	chr20:57970504:G:A	rs73175285	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	58175129	58175130	chr20:58175130:G:A	rs77147533	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.536291379402548	7.241174800232684	GGTAATTAGC
chr20	58550322	58550323	chr20:58550323:G:T	rs76077370	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	58580382	58580383	chr20:58580383:G:A	rs117657619	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	58627677	58627678	chr20:58627678:C:G	rs6100142	C	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr20	58883331	58883332	chr20:58883332:G:A	rs117844021	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	58900135	58900136	chr20:58900136:A:G	rs13831	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr20	58965726	58965727	chr20:58965727:G:C	rs235189	G	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	59078360	59078361	chr20:59078361:T:C	rs6026675	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr20	59087668	59087669	chr20:59087669:T:C	rs10485829	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	59130556	59130557	chr20:59130557:T:A	rs73306821	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	59434832	59434833	chr20:59434833:A:G	rs275335	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	59603171	59603172	chr20:59603172:C:G	rs6026992	C	G	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	59646727	59646728	chr20:59646728:A:T	rs145477649	A	T	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr20	59649129	59649130	chr20:59649130:T:C	rs79565556	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	59775073	59775074	chr20:59775074:G:A	rs6027092	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr20	60220477	60220478	chr20:60220478:A:G	rs171413	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.44231768323065	0.60176045881199	AGTAATTAGG
chr20	60395524	60395525	chr20:60395525:T:C	rs6092934	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	60573224	60573225	chr20:60573225:G:A	rs8123227	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	61112967	61112968	chr20:61112968:G:A	rs113086115	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	61183126	61183127	chr20:61183127:A:G	rs79712054	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr20	61255419	61255420	chr20:61255420:C:T	rs2427016	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr20	61337919	61337920	chr20:61337920:A:G	chr20:61337920:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr20	61337953	61337954	chr20:61337954:A:G	rs6028126	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	61533632	61533633	chr20:61533633:A:G	rs4925186	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	61533656	61533657	chr20:61533657:A:G	rs4925187	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr20	61699472	61699473	chr20:61699473:A:C	rs11700340	A	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	61729104	61729105	chr20:61729105:C:A	rs6089498	C	A	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr20	61758321	61758322	chr20:61758322:C:T	rs34494597	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr20	61855657	61855658	chr20:61855658:C:T	rs73143162	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr20	62512467	62512468	chr20:62512468:T:C	rs149789896	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	5.739039283655441	2.9060883324857407	GCCCATTAGC
chr20	62577280	62577281	chr20:62577281:C:T	rs900561690	C	T	c	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr20	62577282	62577283	chr20:62577283:C:T	rs3813451	C	T	c	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr20	62578406	62578407	chr20:62578407:C:T	rs7260736	C	T	c	Hoxd3.mouse_homeodomain_1	9	1	+	5.739039283655441	5.443922704485577	GCCCATTAGC
chr20	62578410	62578411	chr20:62578411:A:C	rs4969532	A	C	a	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr20	62786278	62786279	chr20:62786279:T:C	rs118006750	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr20	62795732	62795733	chr20:62795733:A:C	rs6011380	A	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	62833086	62833087	chr20:62833087:T:A	rs114738716	T	A	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr20	62833087	62833088	chr20:62833088:G:A	rs1018440	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr20	62974543	62974544	chr20:62974544:G:A	rs1180912940	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr20	62980047	62980048	chr20:62980048:G:C	rs4141975	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	62981169	62981170	chr20:62981170:A:G	rs75230767	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	63140678	63140679	chr20:63140679:A:C	rs6122382	A	C	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	63177877	63177878	chr20:63177878:G:A	rs111794065	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	63217912	63217913	chr20:63217913:T:G	rs56946612	T	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.663322844565413	7.2190107174197315	AGTAATTAAC
chr20	63253565	63253566	chr20:63253566:G:A	rs140682227	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	63611865	63611866	chr20:63611866:A:G	rs76257944	A	G	a	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr21	9036045	9036046	chr21:9036046:A:G	rs1976095	A	G	a	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	9036046	9036047	chr21:9036047:T:C	rs371751763	T	C	t	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	9120346	9120347	chr21:9120347:T:C	rs555971461	T	C	.	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr21	10134274	10134275	chr21:10134275:G:A	rs373434726	G	A	g	Hoxd3.mouse_homeodomain_1	8	1	+	6.277319169927424	6.336234814098862	GGTCATTAGG
chr21	10404517	10404518	chr21:10404518:T:C	rs78208225	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr21	10429770	10429771	chr21:10429771:C:T	rs3904136	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.595207023573987	7.300090444404122	GGTAATTAAC
chr21	10429775	10429776	chr21:10429776:A:G	rs4324411	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr21	14087278	14087279	chr21:14087279:C:T	rs13048370	C	T	-	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr21	14241379	14241380	chr21:14241380:C:T	rs9978140	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr21	15138431	15138432	chr21:15138432:T:G	rs2823082	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr21	15354586	15354587	chr21:15354587:C:T	rs1297246	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr21	15433173	15433174	chr21:15433174:T:C	rs2823273	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	16246746	16246747	chr21:16246747:C:A	rs556317351	C	A	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr21	16589223	16589224	chr21:16589224:A:G	rs7279730	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.450525492992999	3.5904290494322515	GCCAATTACC
chr21	16806771	16806772	chr21:16806772:T:G	rs34810597	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr21	17045249	17045250	chr21:17045250:A:G	rs2205317	A	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	17670976	17670977	chr21:17670977:G:A	rs8134716	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr21	17693810	17693811	chr21:17693811:G:C	rs2824448	G	C	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	17869178	17869179	chr21:17869179:G:A	rs66740171	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr21	18179310	18179311	chr21:18179311:C:A	rs2824685	C	A	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr21	18518199	18518200	chr21:18518200:C:A	rs2824894	C	A	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr21	18679035	18679036	chr21:18679036:C:T	rs2824988	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr21	18922213	18922214	chr21:18922214:T:G	rs148606953	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.300090444404122	3.3929953863031885	GGTAATTAAT
chr21	18922237	18922238	chr21:18922238:A:G	rs438280	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr21	19049754	19049755	chr21:19049755:G:A	rs9653750	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.44231768323065	7.05741800146904	AGTAATTAGG
chr21	19049764	19049765	chr21:19049765:G:A	rs9978849	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr21	19120658	19120659	chr21:19120659:C:T	rs28617295	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.8337638605482685	6.892679504719707	GGCAATTAGG
chr21	19557361	19557362	chr21:19557362:A:G	rs1387617	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr21	19638442	19638443	chr21:19638443:T:C	rs2154623	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	19836282	19836283	chr21:19836283:G:A	rs12172913	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.523462835073753	6.363655333231662	CGCAATTAAG
chr21	20479407	20479408	chr21:20479408:G:A	rs990242	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr21	22352077	22352078	chr21:22352078:A:T	rs2186546	A	T	t	Hoxd3.mouse_homeodomain_1	7	1	+	6.901879681539695	4.381269318185518	AGCAATTAGG
chr21	22904880	22904881	chr21:22904881:C:T	rs74685431	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	23494243	23494244	chr21:23494244:C:T	rs13049330	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	23966749	23966750	chr21:23966750:A:G	rs9983334	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	25079798	25079799	chr21:25079799:A:C	rs75940388	A	C	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr21	25895954	25895955	chr21:25895955:C:T	rs112836526	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.901879681539695	6.234158914836294	AGCAATTAGG
chr21	26110864	26110865	chr21:26110865:A:G	rs45444493	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr21	26126272	26126273	chr21:26126273:T:G	rs2830069	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.989302180477614	5.673694444006772	GGTAATTAGA
chr21	26719969	26719970	chr21:26719970:C:T	rs2830437	C	T	c	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr21	26719984	26719985	chr21:26719985:G:A	rs149781018	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	-	6.466705306321288	5.942565884751477	CCCAATTAGC
chr21	26743609	26743610	chr21:26743610:A:G	rs2830451	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr21	26925534	26925535	chr21:26925535:G:A	rs9977087	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	26926726	26926727	chr21:26926727:A:G	rs229086	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr21	26968369	26968370	chr21:26968370:A:G	chr21:26968370:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr21	27022861	27022862	chr21:27022862:A:G	rs140699081	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr21	27412722	27412723	chr21:27412723:T:C	rs239660	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr21	27552601	27552602	chr21:27552602:C:G	rs4817179	C	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr21	27675635	27675636	chr21:27675636:G:C	rs139567984	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.540805396797378	6.155408913823135	GCCAATTAGT
chr21	28744430	28744431	chr21:28744431:T:C	rs2832045	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.054769021883032	5.065911119969849	GGCAATTAAC
chr21	28772140	28772141	chr21:28772141:G:A	rs78848610	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr21	28829383	28829384	chr21:28829384:T:C	rs4816332	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr21	30839361	30839362	chr21:30839362:A:T	rs2833122	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.503391442821062	5.413894110990485	ACTAATTAAC
chr21	31463452	31463453	chr21:31463453:A:G	rs62221260	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr21	31569142	31569143	chr21:31569143:T:C	rs9983420	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr21	32565748	32565749	chr21:32565749:T:G	rs844991	T	G	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr21	32906892	32906893	chr21:32906893:A:T	rs12627339	A	T	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	33007649	33007650	chr21:33007650:C:T	rs59839663	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	33033207	33033208	chr21:33033208:G:A	rs148168238	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr21	33202157	33202158	chr21:33202158:G:A	rs73358277	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr21	33235130	33235131	chr21:33235131:G:A	rs6517153	G	A	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr21	33461578	33461579	chr21:33461579:T:G	rs4817572	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	6.995853377711593	3.1553542011595255	GGCAATTAGC
chr21	33700643	33700644	chr21:33700644:T:C	rs75812502	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	34022610	34022611	chr21:34022611:T:C	rs62228202	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr21	34149266	34149267	chr21:34149267:T:C	rs75072392	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.962953441130107	4.9740955392169255	ACCAATTAAC
chr21	34167610	34167611	chr21:34167611:C:T	rs2834390	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr21	34673037	34673038	chr21:34673038:C:T	rs753082345	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr21	34693371	34693372	chr21:34693372:G:A	rs58440203	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.845053790848919	6.460154109087309	CCTAATTAGG
chr21	34745353	34745354	chr21:34745354:T:C	rs56043149	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	34881745	34881746	chr21:34881746:C:T	rs12482508	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr21	34901878	34901879	chr21:34901879:T:C	rs2834662	T	C	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr21	34994939	34994940	chr21:34994940:G:A	rs749193759	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr21	35423754	35423755	chr21:35423755:C:T	rs2242736	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr21	35485189	35485190	chr21:35485190:C:T	rs1015602	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr21	35525027	35525028	chr21:35525028:C:T	rs387224	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr21	35659878	35659879	chr21:35659879:C:T	rs2835071	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr21	35967193	35967194	chr21:35967194:C:G	rs2835187	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr21	35970822	35970823	chr21:35970823:G:A	rs34401896	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr21	35970824	35970825	chr21:35970825:T:C	rs2776279	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr21	36171466	36171467	chr21:36171467:C:T	rs2242810	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	36171494	36171495	chr21:36171495:C:A	rs2242811	C	A	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr21	36989680	36989681	chr21:36989681:T:G	rs58906509	T	G	g	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	36991120	36991121	chr21:36991121:T:C	rs2096494	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr21	37075724	37075725	chr21:37075725:A:G	rs1155786	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr21	37290152	37290153	chr21:37290153:G:A	rs73903538	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.277319169927424	5.609598403224022	GGTCATTAGG
chr21	37427536	37427537	chr21:37427537:G:A	rs2835732	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr21	37435323	37435324	chr21:37435324:T:C	chr21:37435324:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.376359977658197	4.543409026488495	GCTAATTAGC
chr21	37594406	37594407	chr21:37594407:G:A	rs112841326	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr21	37877161	37877162	chr21:37877162:C:T	rs57264442	C	T	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr21	38324553	38324554	chr21:38324554:T:C	rs2836305	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr21	38374414	38374415	chr21:38374415:T:C	rs62217877	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr21	38832224	38832225	chr21:38832225:T:C	rs762387	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr21	39105164	39105165	chr21:39105165:G:A	rs182778951	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr21	39400557	39400558	chr21:39400558:C:T	rs2837007	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr21	39489749	39489750	chr21:39489750:A:G	rs7280971	A	G	a	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	39564379	39564380	chr21:39564380:C:G	rs141136935	C	G	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr21	39632401	39632402	chr21:39632402:C:A	rs80289816	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.225990353928032	6.54191953061387	CGTAATTAAC
chr21	39685596	39685597	chr21:39685597:A:G	rs2837120	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr21	39911906	39911907	chr21:39911907:A:G	rs776763042	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	39960909	39960910	chr21:39960910:T:C	rs2837329	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr21	40162118	40162119	chr21:40162119:A:C	rs1888498	A	C	C	Hoxd3.mouse_homeodomain_1	3	1	+	7.663322844565413	6.566440152253613	AGTAATTAAC
chr21	41113679	41113680	chr21:41113680:C:T	chr21:41113680:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	41211876	41211877	chr21:41211877:G:C	rs28360503	G	C	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr21	41213023	41213024	chr21:41213024:T:G	chr21:41213024:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr21	41373423	41373424	chr21:41373424:G:A	rs8133827	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	41728096	41728097	chr21:41728097:G:A	rs12626385	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr21	41786887	41786888	chr21:41786888:G:T	rs145680280	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr21	41792119	41792120	chr21:41792120:A:G	rs9974425	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr21	41997287	41997288	chr21:41997288:T:C	rs148494305	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr21	42011465	42011466	chr21:42011466:C:T	rs1054526	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr21	42404419	42404420	chr21:42404420:G:A	rs2156309	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr21	42591914	42591915	chr21:42591915:G:C	rs8127355	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.501233327402089	7.341301925657738	AGTAATTAAG
chr21	42626899	42626900	chr21:42626900:C:T	rs434914	C	T	c	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr21	42633701	42633702	chr21:42633702:G:T	rs430043	G	T	-	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	42821299	42821300	chr21:42821300:T:C	rs77017543	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr21	42878855	42878856	chr21:42878856:G:A	rs2839595	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	42878881	42878882	chr21:42878882:G:T	rs1331716945	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.960795325711134	6.827768263704594	AGCAATTAAG
chr21	42936117	42936118	chr21:42936118:T:C	rs76712678	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr21	43290527	43290528	chr21:43290528:G:C	rs11089015	G	C	.	Hoxd3.mouse_homeodomain_1	2	1	-	6.995853377711593	3.629196321301614	GGCAATTAGC
chr21	43780076	43780077	chr21:43780077:A:G	rs142995750	A	G	a	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr21	43910517	43910518	chr21:43910518:T:C	rs116954058	T	C	t	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr21	43952338	43952339	chr21:43952339:A:G	rs9982600	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.501233327402089	6.960795325711134	AGTAATTAAG
chr21	44718929	44718930	chr21:44718930:C:T	rs173094	C	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr21	44834695	44834696	chr21:44834696:C:G	rs190193	C	G	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr21	45253646	45253647	chr21:45253647:T:G	rs13047104	T	G	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr21	45355333	45355334	chr21:45355334:A:G	rs8127205	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	45508608	45508609	chr21:45508609:A:C	rs79939968	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr21	45640811	45640812	chr21:45640812:C:T	rs765089481	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr21	46191370	46191371	chr21:46191371:T:C	rs73144744	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr21	46285322	46285323	chr21:46285323:T:C	rs17176131	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr21	46672695	46672696	chr21:46672696:A:G	rs79327949	A	G	N	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	10776187	10776188	chr22:10776188:C:T	rs1375869723	C	T	.	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	11067746	11067747	chr22:11067747:A:C	rs2770501	A	C	.	Hoxd3.mouse_homeodomain_1	5	1	-	6.081308823347045	3.0819228633845803	CCCAATTACC
chr22	16917921	16917922	chr22:16917922:A:G	rs13058496	A	G	.	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	17247632	17247633	chr22:17247633:A:G	rs5748987	A	G	-	Hoxd3.mouse_homeodomain_1	4	1	+	6.464547190902314	3.604450747341567	CGCAATTAGG
chr22	17477716	17477717	chr22:17477717:G:C	rs4819593	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	18023817	18023818	chr22:18023818:G:T	rs570264981	G	T	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr22	18134672	18134673	chr22:18134673:T:C	rs4819483	T	C	.	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr22	18370177	18370178	chr22:18370178:T:C	rs372232891	T	C	N	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr22	19025278	19025279	chr22:19025279:T:C	rs3865706	T	C	-	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr22	19044699	19044700	chr22:19044700:A:G	rs55676167	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr22	19044701	19044702	chr22:19044702:G:A	rs1001896	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr22	19082919	19082920	chr22:19082920:T:C	rs60317557	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	19082925	19082926	chr22:19082926:G:A	rs73158832	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	19194044	19194045	chr22:19194045:C:T	rs9605955	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr22	19479773	19479774	chr22:19479774:C:G	rs4141528	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr22	19479779	19479780	chr22:19479780:G:T	chr22:19479780:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr22	19479803	19479804	chr22:19479804:G:A	rs552142667	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	19629566	19629567	chr22:19629567:T:A	rs9618636	T	A	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	19629573	19629574	chr22:19629574:G:T	rs141383481	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	19663868	19663869	chr22:19663869:G:T	rs185858005	G	T	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr22	19691543	19691544	chr22:19691544:A:G	rs5992462	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr22	20245308	20245309	chr22:20245309:C:T	rs375442457	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr22	20571657	20571658	chr22:20571658:C:T	rs472836	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	20936071	20936072	chr22:20936072:A:G	rs8140283	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	20941986	20941987	chr22:20941987:G:C	rs183936919	G	C	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr22	21002829	21002830	chr22:21002830:G:A	rs71314757	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.536291379402548	6.868570612699147	GGTAATTAGC
chr22	21014368	21014369	chr22:21014369:A:G	rs1174341330	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr22	21568614	21568615	chr22:21568615:G:T	rs2266959	G	T	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	21876869	21876870	chr22:21876870:T:C	rs118027376	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	22554429	22554430	chr22:22554430:C:T	rs2266981	C	T	-	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	22708036	22708037	chr22:22708037:C:G	rs5996352	C	G	.	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	23367423	23367424	chr22:23367424:A:G	rs112331205	A	G	a	Hoxd3.mouse_homeodomain_1	3	1	+	6.525620950492726	4.5367630485795445	CCCAATTAAC
chr22	23836944	23836945	chr22:23836945:G:A	rs1128127	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	24069721	24069722	chr22:24069722:G:A	rs2051198	G	A	g	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr22	24222362	24222363	chr22:24222363:A:G	rs5996675	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr22	24302548	24302549	chr22:24302549:T:G	rs542571345	T	G	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	24683987	24683988	chr22:24683988:C:T	rs144954039	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	25057538	25057539	chr22:25057539:C:T	rs6004412	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	25057566	25057567	chr22:25057567:A:G	rs6004413	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr22	25414956	25414957	chr22:25414957:T:A	rs133273	T	A	N	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr22	25966567	25966568	chr22:25966568:C:T	rs13057714	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	26002818	26002819	chr22:26002819:G:A	rs9613077	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.896989798512056	6.547216248812127	ACTAATTACG
chr22	26171325	26171326	chr22:26171326:C:A	rs186168694	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	26314805	26314806	chr22:26314806:C:T	rs6005011	C	T	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	26546394	26546395	chr22:26546395:A:G	rs74869407	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	26800792	26800793	chr22:26800793:G:A	rs141284615	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr22	26892971	26892972	chr22:26892972:C:T	rs9608536	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr22	26903523	26903524	chr22:26903524:C:T	rs11705120	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	26942855	26942856	chr22:26942856:C:T	rs2157461	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.288435975829675	5.938662426129746	GCCAATTACG
chr22	26952932	26952933	chr22:26952933:A:G	rs2331359	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr22	26977970	26977971	chr22:26977971:G:T	rs5752459	G	T	.	Hoxd3.mouse_homeodomain_1	9	1	-	7.503391442821062	6.956402243896128	ACTAATTAAC
chr22	27392818	27392819	chr22:27392819:G:T	rs13055758	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	27633003	27633004	chr22:27633004:G:A	rs567788944	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr22	27633037	27633038	chr22:27633038:G:A	rs133995	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	27868092	27868093	chr22:27868093:C:T	rs5752651	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	28234798	28234799	chr22:28234799:T:G	rs134180	T	G	G	Hoxd3.mouse_homeodomain_1	4	1	-	6.450525492992999	4.001370022718146	GCCAATTACC
chr22	28299653	28299654	chr22:28299654:T:C	rs16986280	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr22	28857375	28857376	chr22:28857376:T:C	rs5762864	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	28906917	28906918	chr22:28906918:A:G	rs132536	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr22	29114135	29114136	chr22:29114136:C:T	rs134684	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr22	29118658	29118659	chr22:29118659:T:C	rs4823011	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr22	29202273	29202274	chr22:29202274:G:T	rs1573711	G	T	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr22	29209142	29209143	chr22:29209143:A:G	rs1262312863	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr22	29245288	29245289	chr22:29245289:A:G	rs5763092	A	G	G	Hoxd3.mouse_homeodomain_1	2	1	-	7.604407200393974	7.0639691987030195	AGTAATTAGC
chr22	29780807	29780808	chr22:29780808:G:A	chr22:29780808:G:A	G	A	g	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr22	30446107	30446108	chr22:30446108:T:A	rs5753146	T	A	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	30536685	30536686	chr22:30536686:T:C	rs1107844	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr22	30636088	30636089	chr22:30636089:G:A	rs9609025	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	30668748	30668749	chr22:30668749:A:G	rs34779325	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	30831913	30831914	chr22:30831914:T:C	rs5753338	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr22	30831944	30831945	chr22:30831945:T:C	rs5753339	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	31211357	31211358	chr22:31211358:A:G	rs114649763	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	31943198	31943199	chr22:31943199:A:G	rs9609391	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.081308823347045	3.221212379786298	CCCAATTACC
chr22	32319571	32319572	chr22:32319572:A:C	rs5753966	A	C	c	Hoxd3.mouse_homeodomain_1	7	1	+	6.450525492992999	2.6100263164409316	GCCAATTACC
chr22	32336369	32336370	chr22:32336370:G:A	rs5998423	G	A	g	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	32542298	32542299	chr22:32542299:C:G	rs11704755	C	G	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr22	32649408	32649409	chr22:32649409:C:T	rs131068	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	33219856	33219857	chr22:33219857:A:G	rs137462	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr22	33330676	33330677	chr22:33330677:T:C	rs12484156	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	33848739	33848740	chr22:33848740:A:T	rs2267304	A	T	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	33854645	33854646	chr22:33854646:T:C	rs715502	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	34116324	34116325	chr22:34116325:A:G	rs150045082	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.466829206223548	6.6266367080656385	TGCAATTAGC
chr22	34194944	34194945	chr22:34194945:G:A	rs12483983	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	34312658	34312659	chr22:34312659:C:T	rs16993879	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	34434725	34434726	chr22:34434726:G:T	chr22:34434726:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr22	35074128	35074129	chr22:35074129:C:T	rs11089727	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr22	35074158	35074159	chr22:35074159:T:C	rs9622120	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	35170844	35170845	chr22:35170845:C:T	rs8140804	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr22	35973463	35973464	chr22:35973464:C:T	rs6000049	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	36184793	36184794	chr22:36184794:C:T	rs546128042	C	T	c	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr22	36552397	36552398	chr22:36552398:T:C	rs140023	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr22	36552425	36552426	chr22:36552426:C:T	rs11913223	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	36874142	36874143	chr22:36874143:G:T	rs34365995	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr22	36879717	36879718	chr22:36879718:T:G	rs34072125	T	G	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr22	36879736	36879737	chr22:36879737:C:A	rs12168057	C	A	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	37589719	37589720	chr22:37589720:C:T	rs9622650	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	37609358	37609359	chr22:37609359:A:T	rs186284993	A	T	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr22	37609384	37609385	chr22:37609385:G:T	rs911743167	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	38188696	38188697	chr22:38188697:T:C	rs8140036	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	38873715	38873716	chr22:38873716:G:A	rs2899306	G	A	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr22	39289826	39289827	chr22:39289827:G:A	rs79290	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	39318902	39318903	chr22:39318903:A:G	rs137625	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr22	39820603	39820604	chr22:39820604:C:T	rs58505471	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.663322844565413	6.995602077862013	AGTAATTAAC
chr22	40185817	40185818	chr22:40185818:A:G	rs8142495	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr22	40727733	40727734	chr22:40727734:C:T	rs9611399	C	T	c	Hoxd3.mouse_homeodomain_1	1	1	-	6.220683642931706	5.552962876228305	GGTAATGAGC
chr22	40797641	40797642	chr22:40797642:A:C	rs117827738	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.066058952183682	5.7504512157128405	CCTAATTAAC
chr22	40855660	40855661	chr22:40855661:A:G	chr22:40855661:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	41128935	41128936	chr22:41128936:C:T	rs9623332	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	6.448367377574026	6.0985938278740965	GGCAATTACG
chr22	41174740	41174741	chr22:41174741:T:C	rs5758251	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	41620124	41620125	chr22:41620125:A:G	rs28384698	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr22	41924598	41924599	chr22:41924599:G:C	rs58264802	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr22	41944577	41944578	chr22:41944578:T:C	rs1023499	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	42134645	42134646	chr22:42134646:C:T	rs1015128148	C	T	-	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr22	42173017	42173018	chr22:42173018:T:C	rs714002	T	C	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	42236582	42236583	chr22:42236583:C:T	rs143879709	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	42299765	42299766	chr22:42299766:G:A	rs186865663	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr22	42657469	42657470	chr22:42657470:G:C	rs117438035	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.8337638605482685	6.448367377574026	GGCAATTAGG
chr22	42940224	42940225	chr22:42940225:A:T	rs738390	A	T	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	43025411	43025412	chr22:43025412:T:C	rs139129071	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	43480469	43480470	chr22:43480470:C:T	rs5751501	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	43587881	43587882	chr22:43587882:G:A	rs5764598	G	A	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	44103208	44103209	chr22:44103209:G:C	rs1018419	G	C	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	44344843	44344844	chr22:44344844:G:A	rs10775786	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr22	44367871	44367872	chr22:44367872:G:A	rs763041	G	A	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	44446630	44446631	chr22:44446631:A:G	rs133794	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr22	44453977	44453978	chr22:44453978:A:G	rs571292703	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	44580552	44580553	chr22:44580553:G:C	rs112181786	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr22	44798471	44798472	chr22:44798472:T:G	rs78469259	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.847335806170153	5.750453113858352	TCTAATTAGC
chr22	44825113	44825114	chr22:44825114:G:A	rs6007308	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr22	44851182	44851183	chr22:44851183:A:T	rs5766104	A	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	45155677	45155678	chr22:45155678:T:C	rs132831	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	45236646	45236647	chr22:45236647:C:T	rs5766582	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	45277049	45277050	chr22:45277050:A:G	rs80000651	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr22	45313078	45313079	chr22:45313079:C:T	rs73440432	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	45432152	45432153	chr22:45432153:A:G	rs5765356	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr22	45528056	45528057	chr22:45528057:C:T	rs144033372	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	45532138	45532139	chr22:45532139:T:C	rs136738	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	45607275	45607276	chr22:45607276:A:G	rs112396783	A	G	a	Hoxd3.mouse_homeodomain_1	4	1	+	6.450525492992999	3.5904290494322515	GCCAATTACC
chr22	45937033	45937034	chr22:45937034:C:T	rs9330789	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	46074074	46074075	chr22:46074075:G:A	rs557147848	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	46703071	46703072	chr22:46703072:A:G	rs743035	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr22	46736152	46736153	chr22:46736153:C:A	rs1861739	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	46747877	46747878	chr22:46747878:A:G	rs17761956	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	46747901	46747902	chr22:46747902:A:G	rs62233769	A	G	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr22	46815354	46815355	chr22:46815355:A:C	rs113311203	A	C	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.501233327402089	3.5941382693011543	AGTAATTAAG
chr22	47102939	47102940	chr22:47102940:A:C	rs138739003	A	C	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	47595179	47595180	chr22:47595180:T:C	rs135589	T	C	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr22	47782523	47782524	chr22:47782524:C:A	rs7288105	C	A	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.9888053792649805	7.433117506410662	GGTAATTACG
chr22	47817084	47817085	chr22:47817085:A:G	rs77834670	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.44231768323065	7.374201862239223	AGTAATTAGG
chr22	47835607	47835608	chr22:47835608:T:C	rs738744	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr22	47852147	47852148	chr22:47852148:G:A	rs1807611	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	48025171	48025172	chr22:48025172:A:G	rs9615257	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr22	48025188	48025189	chr22:48025189:A:C	rs135331	A	C	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.273186104666311	3.366091046565377	GCTAATTAAG
chr22	48056137	48056138	chr22:48056138:A:G	rs9615746	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr22	48095881	48095882	chr22:48095882:C:T	rs5768346	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr22	48199746	48199747	chr22:48199747:A:T	rs133536	A	T	g	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	48224971	48224972	chr22:48224972:A:C	rs5767067	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr22	48315746	48315747	chr22:48315747:C:T	rs148976322	C	T	c	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	48500682	48500683	chr22:48500683:T:C	rs76089635	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr22	48665766	48665767	chr22:48665767:G:A	rs11204495	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	48670947	48670948	chr22:48670948:G:A	rs12484312	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr22	48683340	48683341	chr22:48683341:G:A	rs6010583	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr22	48796350	48796351	chr22:48796351:G:A	rs9617449	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.464547190902314	6.304739689060224	CGCAATTAGG
chr22	48914135	48914136	chr22:48914136:G:A	rs62225885	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	49090536	49090537	chr22:49090537:A:G	rs926760	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr22	49155610	49155611	chr22:49155611:G:A	rs9616251	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.6266367080656385	6.466829206223548	CGCAATTAGC
chr22	49162844	49162845	chr22:49162845:T:C	rs5769439	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	49198578	49198579	chr22:49198579:A:G	rs1017312673	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr22	49198591	49198592	chr22:49198592:A:G	rs2873859	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr22	49478605	49478606	chr22:49478606:G:T	rs13053665	G	T	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	49537486	49537487	chr22:49537487:T:C	rs5770526	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	49585062	49585063	chr22:49585063:G:C	rs2071892	G	C	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	49619753	49619754	chr22:49619754:G:T	rs5769707	G	T	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.376359977658197	6.641189944984025	GCTAATTAGC
chr22	49628746	49628747	chr22:49628747:C:G	rs9627755	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	49628768	49628769	chr22:49628769:T:C	rs186632581	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.845053790848919	4.012102839679217	CCTAATTAGG
chr22	49747916	49747917	chr22:49747917:C:G	rs74696913	C	G	c	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	49833856	49833857	chr22:49833857:G:A	rs6009891	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	50091032	50091033	chr22:50091033:A:G	rs8139235	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr22	50117205	50117206	chr22:50117206:C:T	rs882753	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.304615789157963	6.363531433329402	CCCAATTAGG
chr22	50227657	50227658	chr22:50227658:T:C	rs62239325	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	1516650	1516651	chr3:1516651:A:G	rs17786187	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.741948279795344	3.908997328625642	ACCAATTAGG
chr3	2173304	2173305	chr3:2173305:C:T	rs13095138	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr3	2384404	2384405	chr3:2384405:G:A	rs11926996	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	2384419	2384420	chr3:2384420:G:A	rs3856841	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	2691681	2691682	chr3:2691682:A:G	rs17018695	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	3303573	3303574	chr3:3303574:T:C	rs1159830	T	C	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	3741058	3741059	chr3:3741059:C:T	rs6785873	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	4065268	4065269	chr3:4065269:T:A	rs80342198	T	A	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	4068046	4068047	chr3:4068047:C:T	rs764793	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	4195014	4195015	chr3:4195015:G:A	rs9863507	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.901879681539695	6.516979999778085	AGCAATTAGG
chr3	4196917	4196918	chr3:4196918:A:G	rs78384310	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	4196928	4196929	chr3:4196929:A:T	rs2587929	A	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	4343462	4343463	chr3:4343463:T:C	rs116072494	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	4343471	4343472	chr3:4343472:T:A	rs114738536	T	A	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	4587823	4587824	chr3:4587824:T:G	rs74799692	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	4716559	4716560	chr3:4716560:T:G	rs7645905	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr3	4716586	4716587	chr3:4716587:C:T	rs140379607	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	4800546	4800547	chr3:4800547:C:T	rs2291862	C	T	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	4841723	4841724	chr3:4841724:C:G	rs9824167	C	G	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr3	5295363	5295364	chr3:5295364:C:T	rs1391962	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	5720932	5720933	chr3:5720933:C:G	rs148015979	C	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	5720951	5720952	chr3:5720952:G:A	rs74954264	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	5754958	5754959	chr3:5754959:G:A	rs2470637	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.30929062122411	7.368206265395549	AGTAATTAGT
chr3	5754973	5754974	chr3:5754974:G:T	rs2444218	G	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	5768682	5768683	chr3:5768683:C:T	rs143753768	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	5918792	5918793	chr3:5918793:T:C	rs12638272	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	6389266	6389267	chr3:6389267:A:C	rs4413304	A	C	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	7126411	7126412	chr3:7126412:G:A	rs77925390	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	7445489	7445490	chr3:7445490:G:C	rs11718573	G	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	7543515	7543516	chr3:7543516:G:A	rs73019805	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	7999642	7999643	chr3:7999643:G:A	rs11131103	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	9151533	9151534	chr3:9151534:A:G	rs73118610	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	9151565	9151566	chr3:9151566:A:C	rs1410939141	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr3	9716308	9716309	chr3:9716309:T:C	rs697819	T	C	t	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr3	9977293	9977294	chr3:9977294:C:A	rs565620371	C	A	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	10164634	10164635	chr3:10164635:G:C	rs780462568	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.300090444404122	6.930873774758168	GGTAATTAAT
chr3	10356777	10356778	chr3:10356778:G:T	rs145695465	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.220683642931706	5.536612819617544	GGTAATGAGC
chr3	10471671	10471672	chr3:10471672:G:A	rs73020751	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	10643209	10643210	chr3:10643210:C:T	rs6442188	C	T	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	10655556	10655557	chr3:10655557:A:G	rs9872155	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.700736798541729	3.840640354980981	GGCAATTAGT
chr3	10655560	10655561	chr3:10655561:G:A	rs79686943	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.700736798541729	6.7596524427131675	GGCAATTAGT
chr3	11137414	11137415	chr3:11137415:C:T	rs73128473	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.61045689473735	6.315340315567486	GGCAATTACC
chr3	11390041	11390042	chr3:11390042:G:T	rs6806800	G	T	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	11390087	11390088	chr3:11390088:T:G	rs112269909	T	G	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	11559885	11559886	chr3:11559886:C:T	rs9848960	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	11736648	11736649	chr3:11736649:A:C	rs528321068	A	C	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.678572715728777	6.241240225091396	AGCAATTACC
chr3	12280668	12280669	chr3:12280669:G:C	rs13066537	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	13451944	13451945	chr3:13451945:A:C	chr3:13451945:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr3	14246412	14246413	chr3:14246413:C:T	rs900185	C	T	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	14266697	14266698	chr3:14266698:G:C	rs547617479	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	14336131	14336132	chr3:14336132:G:T	rs874967	G	T	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr3	14363430	14363431	chr3:14363431:C:T	rs7650038	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	14397135	14397136	chr3:14397136:T:C	rs6442452	T	C	c	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	14504267	14504268	chr3:14504268:A:G	rs6800512	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	14601383	14601384	chr3:14601384:A:G	rs12631299	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	14716767	14716768	chr3:14716768:C:T	rs200974505	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	15259193	15259194	chr3:15259194:G:A	rs10510435	G	A	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	15405555	15405556	chr3:15405556:A:G	rs140935072	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	15864373	15864374	chr3:15864374:T:C	rs6781202	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	16144038	16144039	chr3:16144039:A:G	rs10865741	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	16144063	16144064	chr3:16144064:A:G	rs11128781	A	G	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr3	16247468	16247469	chr3:16247469:T:G	rs73818338	T	G	G	Hoxd3.mouse_homeodomain_1	4	1	-	6.741948279795344	4.292792809520491	ACCAATTAGG
chr3	16247469	16247470	chr3:16247470:T:A	rs73818339	T	A	A	Hoxd3.mouse_homeodomain_1	3	1	-	6.741948279795344	4.652450947964766	ACCAATTAGG
chr3	16247475	16247476	chr3:16247476:G:T	chr3:16247476:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	16266049	16266050	chr3:16266050:T:C	rs111869071	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	16993585	16993586	chr3:16993586:T:A	rs4685418	T	A	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	17945907	17945908	chr3:17945908:T:G	rs6577604	T	G	G	Hoxd3.mouse_homeodomain_1	3	1	-	7.066058952183682	5.969176259871881	CCTAATTAAC
chr3	18430795	18430796	chr3:18430796:A:G	rs6808523	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	18758454	18758455	chr3:18758455:C:T	rs9849016	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	19866009	19866010	chr3:19866010:C:T	rs2174562	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	19866013	19866014	chr3:19866014:A:G	rs150101237	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	20040962	20040963	chr3:20040963:C:T	chr3:20040963:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr3	20329960	20329961	chr3:20329961:T:C	rs7619947	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	20435617	20435618	chr3:20435618:A:C	rs17193205	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	20539945	20539946	chr3:20539946:T:A	rs76542797	T	A	t	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	20588902	20588903	chr3:20588903:G:A	rs62242105	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.279477285346397	5.755337863776585	GCTCATTAGC
chr3	20737734	20737735	chr3:20737735:C:T	rs55930567	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	6.707147650556478	AGTAATTACG
chr3	21238813	21238814	chr3:21238814:T:C	rs7615883	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr3	21328537	21328538	chr3:21328538:A:G	rs2661381	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	21735666	21735667	chr3:21735667:T:G	rs13072271	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	22120420	22120421	chr3:22120421:C:G	rs12485859	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr3	22659257	22659258	chr3:22659258:T:C	rs558650829	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	23002479	23002480	chr3:23002480:T:C	rs6792430	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	23122257	23122258	chr3:23122258:T:C	rs4634143	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	23304723	23304724	chr3:23304724:A:G	rs1027380	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	23463695	23463696	chr3:23463696:G:C	rs34080387	G	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr3	23489358	23489359	chr3:23489359:G:A	rs778511	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.277319169927424	6.34543499091885	GGTCATTAGG
chr3	23648714	23648715	chr3:23648715:G:A	rs73136599	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	23657138	23657139	chr3:23657139:T:C	rs11928874	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	23712806	23712807	chr3:23712807:A:G	rs73824915	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr3	23739587	23739588	chr3:23739588:C:G	rs13085556	C	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr3	23739596	23739597	chr3:23739597:G:T	rs13325359	G	T	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr3	24615444	24615445	chr3:24615445:C:T	rs11926979	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	24831811	24831812	chr3:24831812:T:C	rs9818530	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr3	25047186	25047187	chr3:25047187:T:A	rs369536978	T	A	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	25151553	25151554	chr3:25151554:C:A	rs559834469	C	A	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	25151555	25151556	chr3:25151556:T:C	rs904593	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	26237541	26237542	chr3:26237542:G:A	rs62247627	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	26719500	26719501	chr3:26719501:A:G	rs78226009	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr3	28229769	28229770	chr3:28229770:C:G	rs6810242	C	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr3	28717037	28717038	chr3:28717038:G:A	rs922288	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	29615195	29615196	chr3:29615196:A:G	rs7647230	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	6.678572715728777	2.522013314392167	AGCAATTACC
chr3	29816521	29816522	chr3:29816522:T:C	rs35831867	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.894837620138681	4.034741176577933	GCCAATTAAC
chr3	30162845	30162846	chr3:30162846:C:T	rs78826701	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	30270191	30270192	chr3:30270192:T:C	rs34965130	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr3	30749437	30749438	chr3:30749438:A:G	rs9310941	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	30844313	30844314	chr3:30844314:T:C	rs1494738	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr3	31895499	31895500	chr3:31895500:G:A	rs73824712	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr3	32144516	32144517	chr3:32144517:G:A	rs76954938	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.054769021883032	6.7596524427131675	GGCAATTAAC
chr3	32148141	32148142	chr3:32148142:A:G	rs116151022	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	32439200	32439201	chr3:32439201:C:T	rs12152273	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	32452352	32452353	chr3:32452353:T:A	rs3732842	T	A	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr3	32644128	32644129	chr3:32644129:G:T	rs73057844	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	32850272	32850273	chr3:32850273:T:G	rs78298453	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	32850274	32850275	chr3:32850275:G:T	rs9848887	G	T	g	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	32914390	32914391	chr3:32914391:G:C	rs7643959	G	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	33060971	33060972	chr3:33060972:T:G	rs11129542	T	G	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	33937780	33937781	chr3:33937781:A:C	rs4132139	A	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	34310970	34310971	chr3:34310971:G:A	rs9826990	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	34387597	34387598	chr3:34387598:C:T	rs1211518	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	34678963	34678964	chr3:34678964:C:T	rs11705846	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	35664236	35664237	chr3:35664237:A:G	rs9859804	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	35785712	35785713	chr3:35785713:T:G	rs78386527	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr3	36244111	36244112	chr3:36244112:C:T	rs17034665	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	36296270	36296271	chr3:36296271:C:T	rs6765042	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	36676017	36676018	chr3:36676018:G:A	rs79264911	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	37027065	37027066	chr3:37027066:G:A	rs62244263	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	37200337	37200338	chr3:37200338:G:A	rs17036099	G	A	g	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	37739676	37739677	chr3:37739677:G:A	rs114147614	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr3	37833308	37833309	chr3:37833309:C:T	rs11714705	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	38000690	38000691	chr3:38000691:T:G	rs928807	T	G	G	Hoxd3.mouse_homeodomain_1	4	1	-	6.61045689473735	4.161301424462497	GGCAATTACC
chr3	38517723	38517724	chr3:38517724:A:G	rs17037804	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	38528499	38528500	chr3:38528500:G:T	rs73067106	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.277319169927424	5.593248346613261	GGTCATTAGG
chr3	38626700	38626701	chr3:38626701:A:G	rs7647031	A	G	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	38634385	38634386	chr3:38634386:G:A	rs41314748	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.439408687090748	6.144292107920884	GGTCATTAGC
chr3	39288201	39288202	chr3:39288202:C:T	rs74731718	C	T	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr3	39780425	39780426	chr3:39780426:C:G	rs11720520	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	40095019	40095020	chr3:40095020:A:C	rs12486257	A	C	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr3	40211925	40211926	chr3:40211926:C:T	rs1799427	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	41034405	41034406	chr3:41034406:G:C	rs78398770	G	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	41327687	41327688	chr3:41327688:C:T	rs188030731	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	41500978	41500979	chr3:41500979:G:A	rs9821623	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	41986082	41986083	chr3:41986083:C:T	rs537725058	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	42033121	42033122	chr3:42033122:C:T	rs182337852	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.150894896428305	6.855778317258441	GGTAATTACC
chr3	42074288	42074289	chr3:42074289:A:G	rs17067739	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	42254728	42254729	chr3:42254729:A:G	rs1868520	A	G	g	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	42254740	42254741	chr3:42254741:A:G	rs75222500	A	G	a	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	42891101	42891102	chr3:42891102:A:G	rs2114881	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.150894896428305	2.994335495091695	GGTAATTACC
chr3	43049521	43049522	chr3:43049522:A:G	rs17391070	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	43049524	43049525	chr3:43049525:G:A	rs1523123	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	43533869	43533870	chr3:43533870:T:C	rs17075780	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	43737155	43737156	chr3:43737156:G:A	rs139853863	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	44022643	44022644	chr3:44022644:G:A	rs12632327	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	44099521	44099522	chr3:44099522:A:C	rs74790989	A	C	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.066058952183682	3.1589638940827482	CCTAATTAAC
chr3	44223163	44223164	chr3:44223164:A:G	rs11720465	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr3	44513694	44513695	chr3:44513695:T:C	rs4535266	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	45184995	45184996	chr3:45184996:G:C	rs17077434	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	45410130	45410131	chr3:45410131:C:T	rs41480152	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	46050241	46050242	chr3:46050242:C:G	rs35435608	C	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	46060281	46060282	chr3:46060282:T:A	rs2133664	T	A	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	46060323	46060324	chr3:46060324:C:G	rs2133665	C	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	46108626	46108627	chr3:46108627:C:T	rs1546079	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr3	46108643	46108644	chr3:46108644:T:C	rs1546078	T	C	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.700736798541729	6.995853377711593	GGCAATTAGT
chr3	46108663	46108664	chr3:46108664:C:A	rs13073861	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	46288950	46288951	chr3:46288951:C:T	rs7649364	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	46566769	46566770	chr3:46566770:G:A	rs139721302	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	46664131	46664132	chr3:46664132:A:G	rs4683261	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	47449002	47449003	chr3:47449003:G:A	rs9683177	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.845053790848919	6.460154109087309	CCTAATTAGG
chr3	48015599	48015600	chr3:48015600:C:T	rs146087583	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.503391442821062	6.979252021251251	ACTAATTAAC
chr3	49134791	49134792	chr3:49134792:C:G	rs538270261	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	49249184	49249185	chr3:49249185:T:G	rs4955443	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	7.595207023573987	3.754707847021919	GGTAATTAAC
chr3	49393449	49393450	chr3:49393450:G:A	rs62259944	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr3	49793598	49793599	chr3:49793599:A:G	rs115485248	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	49864726	49864727	chr3:49864727:T:C	rs2883059	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	50241284	50241285	chr3:50241285:G:C	rs58051625	G	C	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	50547208	50547209	chr3:50547209:C:T	rs77462565	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.300090444404122	6.632369677700721	GGTAATTAAT
chr3	50586143	50586144	chr3:50586144:T:A	rs3749265	T	A	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.450525492992999	4.322771600277593	GCCAATTACC
chr3	50652919	50652920	chr3:50652920:A:C	rs539073051	A	C	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr3	50652920	50652921	chr3:50652921:G:A	rs553968360	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	52240150	52240151	chr3:52240151:A:G	rs374753681	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.277319169927424	-0.5632380544912361	GGTCATTAGG
chr3	52279827	52279828	chr3:52279828:T:C	rs73088787	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	52742591	52742592	chr3:52742592:A:T	rs72960260	A	T	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	52846403	52846404	chr3:52846404:T:C	rs4687670	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.501233327402089	6.960795325711134	AGTAATTAAG
chr3	52846425	52846426	chr3:52846426:G:A	rs76252265	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	53072552	53072553	chr3:53072553:G:A	rs550387164	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	53128389	53128390	chr3:53128390:G:A	rs9858469	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr3	53220914	53220915	chr3:53220915:T:C	rs1979491	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	53254160	53254161	chr3:53254161:A:G	rs78093026	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr3	53323925	53323926	chr3:53323926:T:A	rs151049844	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	54624981	54624982	chr3:54624982:C:T	rs34836904	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	56886345	56886346	chr3:56886346:T:C	rs7620766	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr3	56898338	56898339	chr3:56898339:A:T	rs113580223	A	T	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	57043698	57043699	chr3:57043699:C:A	rs7646969	C	A	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	57229021	57229022	chr3:57229022:T:A	rs562155467	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	57434321	57434322	chr3:57434322:A:G	rs544292828	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.61045689473735	3.7775059435676486	GGCAATTACC
chr3	57592645	57592646	chr3:57592646:C:T	rs7644731	C	T	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	57902597	57902598	chr3:57902598:A:G	rs73088398	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	58011468	58011469	chr3:58011469:C:T	rs759350725	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	58032379	58032380	chr3:58032380:G:C	rs1658397	G	C	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	58049393	58049394	chr3:58049394:C:T	rs115032985	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.604407200393974	7.30929062122411	AGTAATTAGC
chr3	58434814	58434815	chr3:58434815:T:C	rs11924677	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	58560833	58560834	chr3:58560834:T:C	rs7635105	T	C	c	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	59001848	59001849	chr3:59001849:T:G	rs59750376	T	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	59171533	59171534	chr3:59171534:A:C	rs6774978	A	C	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr3	59277899	59277900	chr3:59277900:C:T	rs78040317	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.741948279795344	7.282386281486299	ACCAATTAGG
chr3	59379311	59379312	chr3:59379312:T:A	rs7612544	T	A	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	59452025	59452026	chr3:59452026:T:C	rs57692548	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	59515624	59515625	chr3:59515625:C:T	rs12629410	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	59612365	59612366	chr3:59612366:A:G	rs9831268	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr3	59894415	59894416	chr3:59894416:A:G	rs17299801	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	59949699	59949700	chr3:59949700:T:G	rs55649496	T	G	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	59949724	59949725	chr3:59949725:T:C	rs3821476	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	60046232	60046233	chr3:60046233:A:G	rs6779755	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	60055536	60055537	chr3:60055537:T:C	rs112415324	T	C	t	Hoxd3.mouse_homeodomain_1	4	1	-	6.960795325711134	4.100698882150386	AGCAATTAAG
chr3	60263212	60263213	chr3:60263213:T:C	rs79657546	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	60359941	60359942	chr3:60359942:A:C	rs77169519	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	60379129	60379130	chr3:60379130:T:C	rs17062882	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.525620950492726	3.6655245069319795	CCCAATTAAC
chr3	60558745	60558746	chr3:60558746:A:C	rs6805412	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	61334815	61334816	chr3:61334816:T:C	rs12490112	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	61560461	61560462	chr3:61560462:T:G	rs114884372	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr3	61581307	61581308	chr3:61581308:C:A	rs115075749	C	A	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	61948791	61948792	chr3:61948792:T:C	rs1479400	T	C	t	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	61956210	61956211	chr3:61956211:C:T	rs43182	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr3	61966244	61966245	chr3:61966245:G:A	rs56104651	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	62093192	62093193	chr3:62093193:A:G	rs2661884	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr3	62587746	62587747	chr3:62587747:T:G	rs115309477	T	G	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	62587762	62587763	chr3:62587763:T:C	rs1148827	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	62696118	62696119	chr3:62696119:A:G	rs1876251	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.341301925657738	7.273186104666311	ACTAATTAAG
chr3	62696119	62696120	chr3:62696120:C:G	rs34003986	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.341301925657738	7.501233327402089	ACTAATTAAG
chr3	62696237	62696238	chr3:62696238:T:A	rs1911183	T	A	A	Hoxd3.mouse_homeodomain_1	6	1	+	6.540805396797378	3.7202190030121036	GCCAATTAGT
chr3	62719399	62719400	chr3:62719400:G:C	rs6768003	G	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr3	62828445	62828446	chr3:62828446:T:A	rs12491258	T	A	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	63052271	63052272	chr3:63052272:C:T	rs749244	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	63209799	63209800	chr3:63209800:A:G	rs6796841	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	63240002	63240003	chr3:63240003:T:A	rs12632294	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr3	63993641	63993642	chr3:63993642:A:G	rs1472835048	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	63993645	63993646	chr3:63993646:A:T	rs142678182	A	T	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.663322844565413	7.066182852085942	AGTAATTAAC
chr3	64067530	64067531	chr3:64067531:T:C	rs166230	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	64382206	64382207	chr3:64382207:T:C	rs115830870	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.501233327402089	5.512375425488907	AGTAATTAAG
chr3	64566788	64566789	chr3:64566789:C:T	rs17071083	C	T	c	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	64894701	64894702	chr3:64894702:G:A	rs704444	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr3	64917152	64917153	chr3:64917153:G:T	rs11710147	G	T	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr3	65234805	65234806	chr3:65234806:G:A	rs1109195	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	65234819	65234820	chr3:65234820:A:T	rs1109194	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	65523770	65523771	chr3:65523771:T:A	rs62255325	T	A	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	65752917	65752918	chr3:65752918:T:G	rs12496110	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	65807458	65807459	chr3:65807459:C:T	rs56331708	C	T	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	65807489	65807490	chr3:65807490:G:A	rs55856805	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	65914072	65914073	chr3:65914073:T:G	rs76258687	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	65964227	65964228	chr3:65964228:C:A	rs117603829	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	66073971	66073972	chr3:66073972:C:A	rs72897150	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	66101811	66101812	chr3:66101812:T:C	rs28791333	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr3	66516783	66516784	chr3:66516784:T:C	rs7646790	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	66527494	66527495	chr3:66527495:A:G	rs1403624	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	66863772	66863773	chr3:66863773:T:C	rs115044961	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.501233327402089	0.6606761029834289	AGTAATTAAG
chr3	67380446	67380447	chr3:67380447:A:G	rs73098354	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	69292188	69292189	chr3:69292189:G:T	rs35548440	G	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.054769021883032	6.525744850394987	GGCAATTAAC
chr3	69558890	69558891	chr3:69558891:T:C	rs187392748	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr3	69579951	69579952	chr3:69579952:T:C	rs288503	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	70264423	70264424	chr3:70264424:A:G	rs138709924	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	70632953	70632954	chr3:70632954:G:A	rs13080543	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	71302939	71302940	chr3:71302940:A:C	rs12374070	A	C	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	71512147	71512148	chr3:71512148:T:C	rs371497695	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	71901686	71901687	chr3:71901687:C:T	rs73105069	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr3	72256349	72256350	chr3:72256350:G:C	chr3:72256350:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	72260663	72260664	chr3:72260664:A:G	rs145566835	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr3	72351870	72351871	chr3:72351871:C:T	rs56388700	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	72354582	72354583	chr3:72354583:A:G	rs6792087	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	73109101	73109102	chr3:73109102:C:T	rs60594044	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	73466027	73466028	chr3:73466028:C:T	rs62246079	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.167074709756593	6.499353943053193	CGTAATTAGC
chr3	73466589	73466590	chr3:73466590:G:A	rs62246080	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	73680448	73680449	chr3:73680449:C:T	rs73110480	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr3	73680470	73680471	chr3:73680471:C:T	rs7649679	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.501233327402089	6.833512560698688	AGTAATTAAG
chr3	74304820	74304821	chr3:74304821:T:A	rs594166	T	A	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	75379265	75379266	chr3:75379266:A:G	rs192001223	A	G	.	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	75925033	75925034	chr3:75925034:A:C	rs6549825	A	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	76702860	76702861	chr3:76702861:T:G	rs2608137	T	G	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	78659893	78659894	chr3:78659894:G:A	rs9829907	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	78868132	78868133	chr3:78868133:C:T	rs331146	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	79879434	79879435	chr3:79879435:C:T	rs546006451	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	81842324	81842325	chr3:81842325:A:G	rs13091492	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	81997055	81997056	chr3:81997056:G:A	rs9816690	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.835921975967242	6.540805396797378	GCCAATTAGC
chr3	84987861	84987862	chr3:84987862:C:G	rs17734184	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	86695485	86695486	chr3:86695486:C:T	rs9858679	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr3	87202211	87202212	chr3:87202212:C:T	rs58547955	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	87202217	87202218	chr3:87202218:T:C	rs74791426	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	87501429	87501430	chr3:87501430:G:A	rs7629379	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	89047494	89047495	chr3:89047495:C:A	rs1021581	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	89527238	89527239	chr3:89527239:C:T	rs73145309	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	90226541	90226542	chr3:90226542:A:G	rs7433265	A	G	a	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	90226545	90226546	chr3:90226546:G:A	rs6766992	G	A	g	Hoxd3.mouse_homeodomain_1	0	1	+	6.995853377711593	7.0639691987030195	GGCAATTAGC
chr3	94349903	94349904	chr3:94349904:A:G	rs9853108	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	94734436	94734437	chr3:94734437:G:A	rs62271492	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	94734454	94734455	chr3:94734455:C:A	rs11706923	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.374201862239223	7.241174800232684	GGTAATTAGG
chr3	95211382	95211383	chr3:95211383:T:A	rs1319113	T	A	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	95449964	95449965	chr3:95449965:A:C	rs4280637	A	C	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	95759540	95759541	chr3:95759541:T:C	rs2089865	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	95815980	95815981	chr3:95815981:G:A	rs13080677	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	96450261	96450262	chr3:96450262:G:A	rs116669649	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	97737063	97737064	chr3:97737064:C:A	rs9864542	C	A	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	97825650	97825651	chr3:97825651:G:A	rs13066996	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	98180789	98180790	chr3:98180790:A:G	rs9880245	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr3	98180803	98180804	chr3:98180804:C:A	rs9860882	C	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	6.439408687090748	5.755337863776585	GGTCATTAGC
chr3	98529887	98529888	chr3:98529888:T:C	rs1461155	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.503391442821062	7.435275621829636	ACTAATTAAC
chr3	98530155	98530156	chr3:98530156:T:C	rs1675519	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.30929062122411	3.1527312198875004	AGTAATTAGT
chr3	98530181	98530182	chr3:98530182:T:C	rs1675518	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	98726479	98726480	chr3:98726480:A:G	rs865474	A	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	98785832	98785833	chr3:98785833:A:T	rs828609	A	T	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	99032310	99032311	chr3:99032311:G:T	rs1082405	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr3	99116276	99116277	chr3:99116277:C:T	rs4928196	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr3	99319799	99319800	chr3:99319800:C:T	rs1383843	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	99506251	99506252	chr3:99506252:G:A	rs35722344	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	99690655	99690656	chr3:99690656:C:T	rs1112773	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	101380346	101380347	chr3:101380347:G:A	rs2049107	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr3	101382120	101382121	chr3:101382121:A:G	rs2049108	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	101850718	101850719	chr3:101850719:C:G	rs146586530	C	G	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	101993869	101993870	chr3:101993870:A:G	rs771789	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	102266401	102266402	chr3:102266402:G:C	rs2086269	G	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	103440755	103440756	chr3:103440756:C:A	rs112526604	C	A	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	105582292	105582293	chr3:105582293:G:A	rs9288812	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	105611688	105611689	chr3:105611689:G:T	rs114786813	G	T	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	105648406	105648407	chr3:105648407:A:T	rs34599304	A	T	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	105843095	105843096	chr3:105843096:T:C	rs35581896	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr3	105865221	105865222	chr3:105865222:C:T	rs9841500	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	105981420	105981421	chr3:105981421:T:C	rs2618336	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr3	106371293	106371294	chr3:106371294:G:A	rs76148837	G	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	106629141	106629142	chr3:106629142:G:A	rs114303530	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	106629149	106629150	chr3:106629150:G:A	rs4440151	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	107303669	107303670	chr3:107303670:C:T	rs73194564	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.376359977658197	7.081243398488333	GCTAATTAGC
chr3	107884982	107884983	chr3:107884983:G:A	rs960470	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	108122229	108122230	chr3:108122230:T:C	rs62264095	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr3	108509897	108509898	chr3:108509898:T:C	rs13099836	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.374201862239223	5.385343960326042	GGTAATTAGG
chr3	108511142	108511143	chr3:108511143:T:C	rs2603139	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.989302180477614	2.832742779141004	GGTAATTAGA
chr3	108975192	108975193	chr3:108975193:G:A	rs2922138	G	A	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	110414484	110414485	chr3:110414485:C:T	rs2669100	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	111286271	111286272	chr3:111286272:T:C	rs1881675	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	111535339	111535340	chr3:111535340:G:T	rs1391362	G	T	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	111535342	111535343	chr3:111535343:G:A	rs111461407	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	111669866	111669867	chr3:111669867:G:A	rs116042416	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	111728211	111728212	chr3:111728212:A:G	rs4682298	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	111782337	111782338	chr3:111782338:G:C	rs3922704	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	111961456	111961457	chr3:111961457:A:G	rs4682066	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	111961481	111961482	chr3:111961482:G:A	rs4682067	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	112032356	112032357	chr3:112032357:C:T	rs73216046	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	112052504	112052505	chr3:112052505:A:G	rs11928025	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.501233327402089	7.433117506410662	AGTAATTAAG
chr3	112090687	112090688	chr3:112090688:A:C	rs28722116	A	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	112137176	112137177	chr3:112137177:G:T	rs1492481	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	112246274	112246275	chr3:112246275:T:G	rs1844995	T	G	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	112246288	112246289	chr3:112246289:G:A	rs9878213	G	A	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	112365224	112365225	chr3:112365225:T:A	rs16859507	T	A	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	112752336	112752337	chr3:112752337:C:G	rs820552	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.595207023573987	7.225990353928032	GGTAATTAAC
chr3	112856232	112856233	chr3:112856233:A:G	rs4682120	A	G	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	112979246	112979247	chr3:112979247:A:G	rs114495187	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	113093013	113093014	chr3:113093014:G:A	rs34958128	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.995853377711593	6.700736798541729	GGCAATTAGC
chr3	114510467	114510468	chr3:114510468:G:T	rs74816704	G	T	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	114565694	114565695	chr3:114565695:G:A	rs540582987	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	114792508	114792509	chr3:114792509:T:C	rs12490319	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr3	115418644	115418645	chr3:115418645:C:A	rs115900864	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr3	115418671	115418672	chr3:115418672:G:C	rs1846609	G	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	115580710	115580711	chr3:115580711:A:G	rs78743628	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	115697465	115697466	chr3:115697466:C:A	rs79032284	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.277319169927424	6.144292107920884	GGTCATTAGG
chr3	115697488	115697489	chr3:115697489:C:T	rs72943772	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	115945359	115945360	chr3:115945360:A:G	rs3884593	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.845053790848919	3.9849573472881707	CCTAATTAGG
chr3	116176436	116176437	chr3:116176437:C:T	rs9875465	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	116260783	116260784	chr3:116260784:A:G	rs1549831	A	G	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	116950315	116950316	chr3:116950316:C:T	rs11921574	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	117052618	117052619	chr3:117052619:C:A	rs4855914	C	A	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	117052631	117052632	chr3:117052632:C:T	rs58619327	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.30929062122411	6.64156985452071	AGTAATTAGT
chr3	117794124	117794125	chr3:117794125:C:T	rs112053175	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	119234458	119234459	chr3:119234459:T:C	rs72955102	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	119259488	119259489	chr3:119259489:G:A	rs80154137	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	119774742	119774743	chr3:119774743:G:A	rs4688035	G	A	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	120037390	120037391	chr3:120037391:A:T	rs115327285	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr3	120435985	120435986	chr3:120435986:C:G	rs1733304	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	120566823	120566824	chr3:120566824:G:A	rs147352879	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	120849002	120849003	chr3:120849003:T:G	rs4676831	T	G	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.525620950492726	5.4287382581809265	CCCAATTAAC
chr3	122078124	122078125	chr3:122078125:G:A	rs9282645	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	122078136	122078137	chr3:122078137:G:A	rs9282646	G	A	g	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	123188367	123188368	chr3:123188368:A:C	rs7627445	A	C	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	123263429	123263430	chr3:123263430:A:G	chr3:123263430:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.374201862239223	4.541250911069522	GGTAATTAGG
chr3	123733660	123733661	chr3:123733661:C:T	rs41302194	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	123834782	123834783	chr3:123834783:G:C	rs2682208	G	C	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr3	124423737	124423738	chr3:124423738:G:A	rs4274696	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr3	125056089	125056090	chr3:125056090:C:T	rs1000300286	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	125056092	125056093	chr3:125056093:C:A	chr3:125056093:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	125056121	125056122	chr3:125056122:G:T	rs551779321	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr3	125126003	125126004	chr3:125126004:A:G	rs7611635	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr3	125482419	125482420	chr3:125482420:G:A	rs73199106	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	125830154	125830155	chr3:125830155:C:G	rs2979939	C	G	.	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	126151954	126151955	chr3:126151955:A:G	rs4646717	A	G	G	Hoxd3.mouse_homeodomain_1	5	1	-	6.892679504719707	0.05212228030104715	GGCAATTAAG
chr3	126292484	126292485	chr3:126292485:A:G	rs116505654	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	126472167	126472168	chr3:126472168:G:A	rs62264721	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	126476723	126476724	chr3:126476724:A:C	rs58971982	A	C	a	Hoxd3.mouse_homeodomain_1	5	1	-	7.501233327402089	4.501847367439624	AGTAATTAAG
chr3	126563948	126563949	chr3:126563949:C:T	rs67961034	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.989302180477614	7.05741800146904	GGTAATTAGA
chr3	126914575	126914576	chr3:126914576:C:G	rs2303994	C	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	126938173	126938174	chr3:126938174:G:A	rs113031493	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	5.898970685399792	5.231249918696392	GGCCATTAGC
chr3	127113145	127113146	chr3:127113146:G:A	rs1482924	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	127139042	127139043	chr3:127139043:A:G	rs552064577	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	127159687	127159688	chr3:127159688:G:A	rs77043207	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	127230510	127230511	chr3:127230511:A:G	rs11925520	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	127552174	127552175	chr3:127552175:A:C	rs72965719	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr3	127783848	127783849	chr3:127783849:C:T	rs56259630	C	T	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	128007893	128007894	chr3:128007894:A:G	rs6777197	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	128880105	128880106	chr3:128880106:G:C	chr3:128880106:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	129441984	129441985	chr3:129441985:C:T	rs566421503	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.450525492992999	6.155408913823135	GCCAATTACC
chr3	130423566	130423567	chr3:130423567:G:A	rs35665175	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	132187749	132187750	chr3:132187750:T:C	rs1395006	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	132834699	132834700	chr3:132834700:G:A	rs80148226	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr3	132879369	132879370	chr3:132879370:A:C	rs76482573	A	C	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	133034382	133034383	chr3:133034383:G:A	rs113891660	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	133152854	133152855	chr3:133152855:G:A	rs9289440	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr3	133368467	133368468	chr3:133368468:C:G	rs869751	C	G	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	133512862	133512863	chr3:133512863:G:T	rs575103146	G	T	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	133512907	133512908	chr3:133512908:C:T	rs61397946	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	133829261	133829262	chr3:133829262:G:T	rs151278239	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr3	133885319	133885320	chr3:133885320:T:C	rs866520830	T	C	C	Hoxd3.mouse_homeodomain_1	7	1	-	6.277319169927424	2.1207597685908133	GGTCATTAGG
chr3	134156336	134156337	chr3:134156337:G:A	rs12494042	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	134198038	134198039	chr3:134198039:T:C	rs12486035	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	134362684	134362685	chr3:134362685:T:C	rs575857354	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.054769021883032	4.194672578322284	GGCAATTAAC
chr3	134391577	134391578	chr3:134391578:G:T	rs56131699	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	134457848	134457849	chr3:134457849:T:A	rs1022577736	T	A	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.376359977658197	3.5996608558411287	GCTAATTAGC
chr3	134810243	134810244	chr3:134810244:T:A	rs34901704	T	A	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr3	134986362	134986363	chr3:134986363:G:A	rs36100	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr3	135679034	135679035	chr3:135679035:C:T	rs1562462	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	135803475	135803476	chr3:135803476:T:G	rs558262352	T	G	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	135922011	135922012	chr3:135922012:A:G	rs9870581	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.894837620138681	4.034741176577933	GCCAATTAAC
chr3	135922915	135922916	chr3:135922916:T:C	rs116243303	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	136820846	136820847	chr3:136820847:T:C	rs9682783	T	C	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	136820856	136820857	chr3:136820857:C:A	rs9682106	C	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	136838938	136838939	chr3:136838939:T:A	rs182997372	T	A	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	136858562	136858563	chr3:136858563:C:A	rs114581816	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.4444757986496235	6.936686433690574	ACTAATTAGC
chr3	136929764	136929765	chr3:136929765:T:C	rs1965106	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	137104796	137104797	chr3:137104797:G:C	rs35687749	G	C	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr3	137988791	137988792	chr3:137988792:A:C	rs12485871	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr3	138011213	138011214	chr3:138011214:T:G	rs62280602	T	G	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	138593824	138593825	chr3:138593825:T:G	rs34583117	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.2190107174197315	3.3119156593187977	AGTAATTACC
chr3	139670757	139670758	chr3:139670758:T:C	rs9864397	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	139775662	139775663	chr3:139775663:A:T	rs11710391	A	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr3	141174661	141174662	chr3:141174662:C:T	rs1877224	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	141203050	141203051	chr3:141203051:G:A	rs9880393	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	141412174	141412175	chr3:141412175:T:C	rs16851390	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr3	141430444	141430445	chr3:141430445:T:C	rs1978600	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.741948279795344	-0.09860894462331571	ACCAATTAGG
chr3	142209896	142209897	chr3:142209897:T:C	rs150587889	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	142589227	142589228	chr3:142589228:G:A	rs9846960	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.466705306321288	6.306897804479197	CCCAATTAGC
chr3	142723809	142723810	chr3:142723810:C:T	rs1244521947	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	142723817	142723818	chr3:142723818:T:C	rs62278492	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	143744995	143744996	chr3:143744996:G:C	rs17651169	G	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr3	143805092	143805093	chr3:143805093:A:G	rs11919894	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr3	143822624	143822625	chr3:143822625:G:C	rs4839611	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	143898579	143898580	chr3:143898580:C:T	rs6440204	C	T	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	7.501233327402089	AGCAATTAAG
chr3	144242773	144242774	chr3:144242774:G:A	rs3853594	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	144300920	144300921	chr3:144300921:A:G	rs13094155	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	144635857	144635858	chr3:144635858:C:G	rs1091544	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	144775733	144775734	chr3:144775734:C:T	rs60535604	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr3	145011429	145011430	chr3:145011430:T:C	rs73871968	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	145348339	145348340	chr3:145348340:C:A	rs12486701	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	145348340	145348341	chr3:145348341:T:C	rs12490099	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	146281043	146281044	chr3:146281044:T:C	chr3:146281044:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	146317015	146317016	chr3:146317016:C:T	rs2221850	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	146628859	146628860	chr3:146628860:T:G	rs17434603	T	G	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	146836713	146836714	chr3:146836714:A:T	rs55942539	A	T	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr3	148244063	148244064	chr3:148244064:A:T	rs4496445	A	T	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.304615789157963	3.4840293953726893	CCCAATTAGG
chr3	149146043	149146044	chr3:149146044:C:G	rs138808527	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.904037796958669	6.518641313984426	ACCAATTAGC
chr3	149385226	149385227	chr3:149385227:G:A	rs150773532	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	149385252	149385253	chr3:149385253:C:A	rs7610135	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	149474139	149474140	chr3:149474140:T:C	rs189026240	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	150131201	150131202	chr3:150131202:T:A	rs9289803	T	A	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	150397237	150397238	chr3:150397238:T:G	rs34156311	T	G	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	150397258	150397259	chr3:150397259:A:G	rs7620193	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr3	151388181	151388182	chr3:151388182:G:A	rs2276762	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	151388203	151388204	chr3:151388204:C:T	rs9289837	C	T	c	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr3	151793701	151793702	chr3:151793702:C:T	rs148573951	C	T	-	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	152470500	152470501	chr3:152470501:A:G	rs4622883	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	152834492	152834493	chr3:152834493:T:A	rs76467490	T	A	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	152916053	152916054	chr3:152916054:C:T	rs1371103	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	153003576	153003577	chr3:153003577:C:T	rs55899551	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	153283104	153283105	chr3:153283105:T:C	rs16822497	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.536291379402548	4.6761949358418	GGTAATTAGC
chr3	153568773	153568774	chr3:153568774:T:C	rs6772503	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.277319169927424	-0.5632380544912361	GGTCATTAGG
chr3	153578613	153578614	chr3:153578614:C:T	rs1907097	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	153830781	153830782	chr3:153830782:A:C	rs17803063	A	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	154175562	154175563	chr3:154175563:A:G	rs357474	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr3	155313850	155313851	chr3:155313851:A:G	rs115328377	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	155500252	155500253	chr3:155500253:T:G	rs12107115	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	155572412	155572413	chr3:155572413:T:C	rs144388406	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr3	155703018	155703019	chr3:155703019:A:C	rs358707	A	C	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr3	155753259	155753260	chr3:155753260:T:C	rs9818179	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	156682958	156682959	chr3:156682959:T:C	rs145118400	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr3	156788275	156788276	chr3:156788276:T:C	rs62277142	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	156819329	156819330	chr3:156819330:T:A	rs919520	T	A	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.0639691987030195	4.974471866872442	AGCAATTAGC
chr3	157417489	157417490	chr3:157417490:C:T	rs75885334	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	157549764	157549765	chr3:157549765:A:G	rs7432732	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr3	157718979	157718980	chr3:157718980:A:G	rs73873950	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr3	158358405	158358406	chr3:158358406:A:G	rs12487873	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr3	158358433	158358434	chr3:158358434:C:G	rs6441190	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	159122904	159122905	chr3:159122905:A:G	rs17782680	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	159586913	159586914	chr3:159586914:T:C	rs9840484	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	159733166	159733167	chr3:159733167:G:T	rs79466867	G	T	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr3	160049511	160049512	chr3:160049512:G:C	rs1265359348	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.279477285346397	5.894080802372154	GCTCATTAGC
chr3	160678552	160678553	chr3:160678553:C:G	rs6806755	C	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	160705827	160705828	chr3:160705828:A:G	rs111236765	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	160707604	160707605	chr3:160707605:A:T	rs73877940	A	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	160707644	160707645	chr3:160707645:G:T	rs13092981	G	T	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	161222669	161222670	chr3:161222670:C:T	rs7634299	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	161913987	161913988	chr3:161913988:G:T	rs6441413	G	T	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	162394331	162394332	chr3:162394332:T:C	rs6800943	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr3	163364998	163364999	chr3:163364999:C:A	rs9840829	C	A	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	163365007	163365008	chr3:163365008:C:T	rs9840841	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr3	166291835	166291836	chr3:166291836:C:T	rs74340430	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr3	166526417	166526418	chr3:166526418:C:T	rs2863833	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.732748102975356	6.800863923966783	GCCAATTAAG
chr3	166634486	166634487	chr3:166634487:G:A	rs79383620	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	168056778	168056779	chr3:168056779:C:A	rs114344664	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	169097585	169097586	chr3:169097586:G:T	rs6768432	G	T	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	169442513	169442514	chr3:169442514:T:A	rs16853750	T	A	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	170232693	170232694	chr3:170232694:C:T	rs76515783	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	170469406	170469407	chr3:170469407:T:G	rs77033584	T	G	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	170599282	170599283	chr3:170599283:G:A	rs75971282	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	170977921	170977922	chr3:170977922:G:T	rs7635100	G	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	6.525620950492726	6.017831585533677	CCCAATTAAC
chr3	171039581	171039582	chr3:171039582:C:T	rs76488036	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.960795325711134	6.575895643949524	AGCAATTAAG
chr3	171189772	171189773	chr3:171189773:A:T	rs112502203	A	T	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	171584684	171584685	chr3:171584685:C:T	rs396645	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr3	171865320	171865321	chr3:171865321:C:A	rs11927027	C	A	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	172103099	172103100	chr3:172103100:C:T	rs62283811	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.225990353928032	6.558269587224632	CGTAATTAAC
chr3	172148870	172148871	chr3:172148871:G:A	rs73167224	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr3	172261041	172261042	chr3:172261042:A:G	rs9876039	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr3	172320668	172320669	chr3:172320669:A:C	rs79630218	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	172849321	172849322	chr3:172849322:A:G	rs79520329	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	173602094	173602095	chr3:173602095:G:A	rs35932697	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr3	174220799	174220800	chr3:174220800:G:A	rs11713340	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	174336114	174336115	chr3:174336115:C:A	rs1520161	C	A	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	174439290	174439291	chr3:174439291:G:A	rs187110726	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	175095739	175095740	chr3:175095740:G:A	rs60464476	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr3	175095907	175095908	chr3:175095908:C:T	rs114593803	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr3	175095921	175095922	chr3:175095922:T:A	rs145042617	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.435275621829636	5.307521729114231	GCTAATTAAC
chr3	175309936	175309937	chr3:175309937:A:G	chr3:175309937:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	175431867	175431868	chr3:175431868:A:T	rs191191635	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr3	175825521	175825522	chr3:175825522:A:G	rs4894736	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	176562601	176562602	chr3:176562602:T:C	rs13323239	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	176712687	176712688	chr3:176712688:C:G	rs12494273	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	177206702	177206703	chr3:177206703:A:G	rs75207153	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	177446273	177446274	chr3:177446274:T:C	rs11922932	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	177566246	177566247	chr3:177566247:G:A	rs564702	G	A	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	177572394	177572395	chr3:177572395:A:C	rs6768291	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	178017243	178017244	chr3:178017244:G:A	rs2160835	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	178276943	178276944	chr3:178276944:A:C	rs9816659	A	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr3	178785984	178785985	chr3:178785985:G:A	rs4423745	G	A	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	179034989	179034990	chr3:179034990:G:A	rs9842103	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.741948279795344	7.282386281486299	ACCAATTAGG
chr3	179324183	179324184	chr3:179324184:C:T	rs73886620	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	179324186	179324187	chr3:179324187:C:T	rs7610174	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.901879681539695	7.44231768323065	AGCAATTAGG
chr3	179701386	179701387	chr3:179701387:T:C	rs9833074	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr3	179931722	179931723	chr3:179931723:C:T	rs17748864	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.525620950492726	6.365813448650636	CCCAATTAAC
chr3	179978930	179978931	chr3:179978931:A:G	rs4855131	A	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	180802840	180802841	chr3:180802841:T:C	rs952758	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.835921975967242	3.9758255324064944	GCCAATTAGC
chr3	181920461	181920462	chr3:181920462:A:G	rs4855056	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	183011504	183011505	chr3:183011505:A:C	rs7635560	A	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr3	183014141	183014142	chr3:183014142:C:T	rs1547910	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	183564479	183564480	chr3:183564480:G:A	rs4859124	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	183807332	183807333	chr3:183807333:A:G	rs263030	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	183826472	183826473	chr3:183826473:C:T	rs142896463	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr3	184129210	184129211	chr3:184129211:T:C	rs73044228	T	C	t	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	184129239	184129240	chr3:184129240:G:C	chr3:184129240:G:C	G	C	g	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr3	184129239	184129240	chr3:184129240:G:T	rs183256151	G	T	g	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr3	184135268	184135269	chr3:184135269:C:T	rs182550783	C	T	c	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr3	184135282	184135283	chr3:184135283:C:G	rs146922950	C	G	c	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr3	184135286	184135287	chr3:184135287:G:A	rs137921645	G	A	g	Hoxd3.mouse_homeodomain_1	9	1	-	7.503391442821062	7.208274863651198	ACTAATTAAC
chr3	184135286	184135287	chr3:184135287:G:T	chr3:184135287:G:T	G	T	g	Hoxd3.mouse_homeodomain_1	9	1	-	7.503391442821062	6.956402243896128	ACTAATTAAC
chr3	184135310	184135311	chr3:184135311:G:A	chr3:184135311:G:A	G	A	g	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	184544089	184544090	chr3:184544090:G:A	rs540529123	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr3	184595722	184595723	chr3:184595723:C:T	rs7623495	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	186088002	186088003	chr3:186088003:G:A	rs114689162	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	186236722	186236723	chr3:186236723:A:G	rs9864614	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.503391442821062	0.6628342184024029	ACTAATTAAC
chr3	186775523	186775524	chr3:186775524:T:G	rs266733	T	G	.	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	186831365	186831366	chr3:186831366:C:G	rs10937272	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	186933152	186933153	chr3:186933153:T:C	rs12493118	T	C	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr3	186954501	186954502	chr3:186954502:C:T	rs4261869	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	187066441	187066442	chr3:187066442:C:T	rs12054151	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	187566888	187566889	chr3:187566889:C:T	rs139224997	C	T	c	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr3	187738635	187738636	chr3:187738636:T:C	rs553687557	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	187790084	187790085	chr3:187790085:A:T	rs74691904	A	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	7.122884842874458	6.328799166028848	AGCAATTAAC
chr3	187963291	187963292	chr3:187963292:G:T	rs182470647	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	188157367	188157368	chr3:188157368:G:T	rs62289745	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr3	188247126	188247127	chr3:188247127:T:C	rs1062148	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.220683642931706	5.680245641240751	GGTAATGAGC
chr3	188440707	188440708	chr3:188440708:G:A	rs78606996	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.341301925657738	6.817162504087927	ACTAATTAAG
chr3	188506307	188506308	chr3:188506308:T:C	rs1426266	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.341301925657738	6.800863923966783	ACTAATTAAG
chr3	188746413	188746414	chr3:188746414:A:C	chr3:188746414:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	189467967	189467968	chr3:189467968:G:T	rs185465	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	189941391	189941392	chr3:189941392:T:C	rs698109	T	C	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr3	190622164	190622165	chr3:190622165:A:G	rs183895220	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.901879681539695	4.041783237978947	AGCAATTAGG
chr3	191317999	191318000	chr3:191318000:A:T	rs12485795	A	T	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr3	191366615	191366616	chr3:191366616:T:A	rs9290986	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	191696341	191696342	chr3:191696342:G:C	rs963136221	G	C	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr3	192638690	192638691	chr3:192638691:A:G	rs6777906	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr3	193133409	193133410	chr3:193133410:G:T	rs138766286	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	193323960	193323961	chr3:193323961:G:A	rs750907	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr3	193323966	193323967	chr3:193323967:T:A	rs61476114	T	A	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr3	193500162	193500163	chr3:193500163:G:T	rs186863155	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	193511078	193511079	chr3:193511079:C:T	rs9283663	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	193772217	193772218	chr3:193772218:T:C	rs6444745	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	193895450	193895451	chr3:193895451:C:T	rs73890903	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	193946844	193946845	chr3:193946845:A:G	rs7643134	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr3	194069571	194069572	chr3:194069572:T:A	rs78601069	T	A	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	194212922	194212923	chr3:194212923:G:A	rs9842495	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	194219141	194219142	chr3:194219142:G:A	rs79038863	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	194263636	194263637	chr3:194263637:A:G	rs7430914	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	194365342	194365343	chr3:194365343:C:T	rs57220648	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	194365343	194365344	chr3:194365344:G:C	rs149171202	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	194365353	194365354	chr3:194365354:G:A	rs4974514	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	7.167074709756593	6.499353943053193	CGTAATTAGC
chr3	194376057	194376058	chr3:194376058:C:T	rs7642341	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr3	194518857	194518858	chr3:194518858:T:C	rs1511625	T	C	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	194572881	194572882	chr3:194572882:T:G	rs149525219	T	G	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr3	194621143	194621144	chr3:194621144:C:T	rs790002	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr3	194689275	194689276	chr3:194689276:T:G	rs1032098699	T	G	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	194801251	194801252	chr3:194801252:A:G	rs9874101	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr3	194855174	194855175	chr3:194855175:C:T	rs75472634	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.8337638605482685	6.901879681539695	GGCAATTAGG
chr3	195065036	195065037	chr3:195065037:C:T	rs60578349	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	195101239	195101240	chr3:195101240:C:T	rs149682841	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	195101240	195101241	chr3:195101241:G:A	rs73890674	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	195101275	195101276	chr3:195101276:T:A	rs111533260	T	A	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr3	195602085	195602086	chr3:195602086:T:G	rs113650734	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr3	195971154	195971155	chr3:195971155:C:T	rs71244318	C	T	-	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	196021658	196021659	chr3:196021659:C:T	rs7624460	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr3	196057320	196057321	chr3:196057321:G:A	rs492349	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	196441175	196441176	chr3:196441176:A:G	rs67822851	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr3	197032288	197032289	chr3:197032289:A:C	rs7612298	A	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	197227824	197227825	chr3:197227825:T:C	rs79678298	T	C	t	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	197317891	197317892	chr3:197317892:G:T	rs553499147	G	T	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr3	197333994	197333995	chr3:197333995:G:A	rs115016807	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr3	197352874	197352875	chr3:197352875:G:A	rs56331842	G	A	g	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	519624	519625	chr4:519625:C:T	rs4499656	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr4	1012279	1012280	chr4:1012280:A:G	rs774046429	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.241174800232684	5.252316898319502	GGTAATTAGT
chr4	1163632	1163633	chr4:1163633:C:G	rs59465697	C	G	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	1286692	1286693	chr4:1286693:T:C	rs4974583	T	C	t	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr4	1287003	1287004	chr4:1287004:C:T	rs10024013	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	1557060	1557061	chr4:1557061:T:C	rs7688169	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr4	1709364	1709365	chr4:1709365:C:T	rs149752544	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.8337638605482685	6.166043093844867	GGCAATTAGG
chr4	1784063	1784064	chr4:1784064:A:G	rs61407096	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.279477285346397	-0.5610799390722622	GCTCATTAGC
chr4	2135555	2135556	chr4:2135556:T:C	rs6824606	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	2241286	2241287	chr4:2241287:G:T	rs58845982	G	T	T	Hoxd3.mouse_homeodomain_1	1	1	+	7.663322844565413	6.979252021251251	AGTAATTAAC
chr4	2246345	2246346	chr4:2246346:C:T	rs61789364	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	2363813	2363814	chr4:2363814:G:A	rs3135144	G	A	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	2413116	2413117	chr4:2413117:T:C	rs61790170	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr4	2413132	2413133	chr4:2413133:G:C	rs73074345	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	2758205	2758206	chr4:2758206:G:A	rs184186456	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr4	2954030	2954031	chr4:2954031:C:T	rs116714359	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	3290865	3290866	chr4:3290866:T:C	rs77240651	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.732748102975356	3.872651659414608	GCCAATTAAG
chr4	3432608	3432609	chr4:3432609:G:T	rs4690096	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr4	3824109	3824110	chr4:3824110:A:T	rs78580531	A	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr4	3830180	3830181	chr4:3830181:C:A	rs77874022	C	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr4	3830213	3830214	chr4:3830214:A:G	rs28605859	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	3846795	3846796	chr4:3846796:G:C	rs4131255	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	4237194	4237195	chr4:4237195:A:G	rs12498280	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	6.304615789157963	2.1480563878213528	CCCAATTAGG
chr4	4396684	4396685	chr4:4396685:C:G	rs62287945	C	G	-	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	4659997	4659998	chr4:4659998:C:G	rs35964760	C	G	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr4	4830972	4830973	chr4:4830973:G:C	rs28378669	G	C	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	5463276	5463277	chr4:5463277:G:A	rs17464616	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	7.214270460494872	6.6901310389250614	GCTAATTAGG
chr4	5757820	5757821	chr4:5757821:A:G	rs12500761	A	G	a	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	6051772	6051773	chr4:6051773:G:A	rs73073431	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	6110182	6110183	chr4:6110183:G:C	rs142361676	G	C	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	6110184	6110185	chr4:6110185:T:C	rs1209057839	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	6110186	6110187	chr4:6110187:G:C	rs35205417	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	6202297	6202298	chr4:6202298:G:C	rs115563397	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	6318034	6318035	chr4:6318035:G:A	rs73073104	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	6670786	6670787	chr4:6670787:G:A	rs1054909	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr4	6772780	6772781	chr4:6772781:A:G	chr4:6772781:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	7146931	7146932	chr4:7146932:A:G	rs73077779	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr4	7380815	7380816	chr4:7380816:T:G	rs7681193	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	7473136	7473137	chr4:7473137:G:C	rs16840339	G	C	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr4	7608389	7608390	chr4:7608390:G:A	rs73216627	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	7938242	7938243	chr4:7938243:A:G	rs6846757	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	7978570	7978571	chr4:7978571:C:A	rs1317285	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	7979778	7979779	chr4:7979779:G:C	rs146301813	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	8284394	8284395	chr4:8284395:G:A	rs115988495	G	A	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	8296042	8296043	chr4:8296043:A:G	rs13130469	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.277319169927424	-0.5632380544912361	GGTCATTAGG
chr4	8340254	8340255	chr4:8340255:C:T	rs827020	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.0639691987030195	6.396248431999618	AGCAATTAGC
chr4	8345489	8345490	chr4:8345490:T:C	rs77433851	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	8707120	8707121	chr4:8707121:C:T	rs10938739	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr4	8707339	8707340	chr4:8707340:G:A	rs111785644	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	8855246	8855247	chr4:8855247:G:T	rs75436942	G	T	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	9737224	9737225	chr4:9737225:T:G	rs115170452	T	G	t	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	10118984	10118985	chr4:10118985:T:C	rs12374320	T	C	c	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	10297002	10297003	chr4:10297003:C:T	rs139752864	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr4	10549875	10549876	chr4:10549876:C:T	rs10938845	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	10634438	10634439	chr4:10634439:G:A	rs4399980	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.503391442821062	6.979252021251251	ACTAATTAAC
chr4	10655512	10655513	chr4:10655513:A:G	rs12511309	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	10984949	10984950	chr4:10984950:A:G	rs16876402	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	11081005	11081006	chr4:11081006:G:T	rs67661899	G	T	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	11311642	11311643	chr4:11311643:G:A	rs62296359	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	11471360	11471361	chr4:11471361:T:C	rs115799063	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.341301925657738	6.800863923966783	ACTAATTAAG
chr4	11471365	11471366	chr4:11471366:A:T	rs6850730	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.341301925657738	4.82069156230356	ACTAATTAAG
chr4	11651006	11651007	chr4:11651007:G:A	rs75290125	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	12097149	12097150	chr4:12097150:A:G	rs13152023	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	12105858	12105859	chr4:12105859:A:G	rs1993924	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	12667513	12667514	chr4:12667514:A:T	rs28796289	A	T	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	12667527	12667528	chr4:12667528:G:A	rs59769599	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.30929062122411	7.368206265395549	AGTAATTAGT
chr4	12667855	12667856	chr4:12667856:C:G	rs35921562	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr4	12724794	12724795	chr4:12724795:G:A	rs1520287	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	14181260	14181261	chr4:14181261:T:C	rs28545111	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	14181261	14181262	chr4:14181262:G:A	rs58668042	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	15006601	15006602	chr4:15006602:A:G	rs2702523	A	G	G	Hoxd3.mouse_homeodomain_1	2	1	-	7.435275621829636	6.894837620138681	GCTAATTAAC
chr4	15787856	15787857	chr4:15787857:G:A	rs7700059	G	A	g	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	15934257	15934258	chr4:15934258:C:A	rs55803480	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	15953878	15953879	chr4:15953879:A:G	rs56214703	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	15990862	15990863	chr4:15990863:C:T	rs2058147	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	16005334	16005335	chr4:16005335:G:A	chr4:16005335:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	16026337	16026338	chr4:16026338:T:C	rs564869718	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	16032965	16032966	chr4:16032966:C:T	rs10939649	C	T	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	16162070	16162071	chr4:16162071:C:G	rs317853	C	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	16390104	16390105	chr4:16390105:A:G	rs77587484	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	16449827	16449828	chr4:16449828:T:G	rs527869017	T	G	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	16588599	16588600	chr4:16588600:G:C	rs906122	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	17641313	17641314	chr4:17641314:T:A	rs55939327	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.273186104666311	4.452599710881037	GCTAATTAAG
chr4	18155280	18155281	chr4:18155281:C:A	rs77898065	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	18532220	18532221	chr4:18532221:A:G	rs12644833	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	18839043	18839044	chr4:18839044:G:A	rs28409998	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr4	18851121	18851122	chr4:18851122:A:G	rs16897709	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	19429896	19429897	chr4:19429897:C:T	rs28675174	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	19567857	19567858	chr4:19567858:G:A	rs11944084	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	6.288435975829675	5.938662426129746	GCCAATTACG
chr4	19749201	19749202	chr4:19749202:T:A	rs189305685	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	19777019	19777020	chr4:19777020:C:T	rs114289563	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	20204148	20204149	chr4:20204149:G:T	rs67760769	G	T	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	20941391	20941392	chr4:20941392:C:T	rs148206797	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	21248428	21248429	chr4:21248429:C:T	rs111897191	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr4	21248436	21248437	chr4:21248437:T:C	rs2162081	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr4	21517843	21517844	chr4:21517844:T:C	rs12642679	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr4	22346062	22346063	chr4:22346063:T:C	rs756299	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	22480729	22480730	chr4:22480730:T:C	rs2875040	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	22690823	22690824	chr4:22690824:G:T	rs76155112	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	22785112	22785113	chr4:22785113:G:A	rs358246	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	23873935	23873936	chr4:23873936:G:A	rs4550905	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	23888496	23888497	chr4:23888497:C:A	rs78727129	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	24282154	24282155	chr4:24282155:C:G	rs7684549	C	G	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	24922267	24922268	chr4:24922268:C:T	rs73250628	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr4	24965729	24965730	chr4:24965730:C:A	rs4697508	C	A	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	25569421	25569422	chr4:25569422:G:A	rs16877251	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	25859950	25859951	chr4:25859951:A:C	rs114987678	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	5.898970685399792	2.899584725437328	GGCCATTAGC
chr4	25859964	25859965	chr4:25859965:G:A	rs144119386	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	25913879	25913880	chr4:25913880:G:A	rs187620284	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr4	25988074	25988075	chr4:25988075:G:A	rs79524160	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	26812404	26812405	chr4:26812405:G:A	rs55765921	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	26887431	26887432	chr4:26887432:C:T	rs9998368	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	27081625	27081626	chr4:27081626:A:G	rs741135	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr4	27983684	27983685	chr4:27983685:T:C	rs2192543	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr4	29456914	29456915	chr4:29456915:A:G	rs7690294	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	30576552	30576553	chr4:30576553:G:A	rs13131444	G	A	g	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr4	30866264	30866265	chr4:30866265:T:G	rs11941395	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr4	30866265	30866266	chr4:30866266:G:A	rs11936745	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	30916724	30916725	chr4:30916725:A:G	rs60551461	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	31020766	31020767	chr4:31020767:C:T	rs73214977	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.44231768323065	7.05741800146904	AGTAATTAGG
chr4	31020784	31020785	chr4:31020785:C:T	rs115447754	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	31291474	31291475	chr4:31291475:T:C	rs56183366	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	31582388	31582389	chr4:31582389:T:C	rs2045357	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	32987167	32987168	chr4:32987168:C:A	rs67805024	C	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	33045371	33045372	chr4:33045372:A:G	rs28674610	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	34485423	34485424	chr4:34485424:C:T	rs78486236	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.007267207914503	7.066182852085942	TGTAATTAGC
chr4	35175984	35175985	chr4:35175985:A:C	rs115275736	A	C	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	36423716	36423717	chr4:36423717:T:C	rs4524411	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr4	36884349	36884350	chr4:36884350:G:T	rs1982578	G	T	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	37040988	37040989	chr4:37040989:G:A	rs13127946	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	37463347	37463348	chr4:37463348:A:C	rs2973232	A	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr4	37463358	37463359	chr4:37463359:G:A	rs575066021	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.894837620138681	6.5997210409688165	GCCAATTAAC
chr4	37463384	37463385	chr4:37463385:C:G	rs2973233	C	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	37468033	37468034	chr4:37468034:A:G	rs2376753	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	37562929	37562930	chr4:37562930:G:A	rs73807810	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	37908706	37908707	chr4:37908707:C:T	rs16994066	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr4	38101006	38101007	chr4:38101007:A:T	rs76214767	A	T	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	38113309	38113310	chr4:38113310:T:G	rs79416148	T	G	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	38149824	38149825	chr4:38149825:C:T	rs11736433	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	38230013	38230014	chr4:38230014:T:G	rs2055889	T	G	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	38328394	38328395	chr4:38328395:G:A	rs73243350	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	38364768	38364769	chr4:38364769:A:G	rs10213458	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	38591865	38591866	chr4:38591866:G:A	rs7654288	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	38801186	38801187	chr4:38801187:G:A	rs750669654	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	38872095	38872096	chr4:38872096:T:C	rs1472718	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	38929475	38929476	chr4:38929476:A:C	rs13150445	A	C	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.501233327402089	7.063900836764708	AGTAATTAAG
chr4	38986089	38986090	chr4:38986090:C:T	rs35137679	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	39709026	39709027	chr4:39709027:G:A	rs302935	G	A	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	39978251	39978252	chr4:39978252:T:A	rs74746943	T	A	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	39978256	39978257	chr4:39978257:T:G	rs73229730	T	G	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	40180575	40180576	chr4:40180576:C:G	rs74424498	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	40180577	40180578	chr4:40180578:C:T	rs114335460	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	40573021	40573022	chr4:40573022:A:G	rs10023819	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr4	41319904	41319905	chr4:41319905:G:T	rs1178426788	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	41363112	41363113	chr4:41363113:A:G	rs76366870	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	42400752	42400753	chr4:42400753:A:T	rs7667210	A	T	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	42607991	42607992	chr4:42607992:T:C	rs11943849	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr4	42608028	42608029	chr4:42608029:T:C	rs11944810	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	44720625	44720626	chr4:44720626:T:C	rs73181480	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	45013665	45013666	chr4:45013666:T:C	rs73143234	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	45030263	45030264	chr4:45030264:A:G	rs112051458	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr4	45030295	45030296	chr4:45030296:A:G	rs75926674	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	46089790	46089791	chr4:46089791:C:T	rs6853589	C	T	c	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	46277250	46277251	chr4:46277251:T:C	rs775624741	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.6738324588039175	2.5172730574673072	GCCAATTAGG
chr4	46886929	46886930	chr4:46886930:T:C	rs542516570	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr4	47713240	47713241	chr4:47713241:T:C	rs17654381	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	47825352	47825353	chr4:47825353:C:T	rs6819172	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	47914931	47914932	chr4:47914932:C:T	rs73145971	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr4	48074073	48074074	chr4:48074074:G:A	rs55781011	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	48370388	48370389	chr4:48370389:G:C	rs75239362	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	49243588	49243589	chr4:49243589:C:A	rs186045031	C	A	.	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	52265618	52265619	chr4:52265619:A:G	rs970047	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	53475800	53475801	chr4:53475801:A:C	rs61240802	A	C	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	53475801	53475802	chr4:53475802:A:T	rs57587034	A	T	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.056921200256407	6.459781207776936	AGTAATTACG
chr4	53596044	53596045	chr4:53596045:A:T	rs75487561	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr4	53596052	53596053	chr4:53596053:C:T	rs17083167	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.056921200256407	6.672021518494797	AGTAATTACG
chr4	53862172	53862173	chr4:53862173:G:T	rs73143864	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	54227333	54227334	chr4:54227334:A:G	rs374703884	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	54518230	54518231	chr4:54518231:A:G	rs441060	A	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	55133017	55133018	chr4:55133018:G:A	rs17711225	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	55394064	55394065	chr4:55394065:T:C	rs116037544	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr4	56663419	56663420	chr4:56663420:A:G	rs4365784	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	7.30929062122411	4.4491941776633634	AGTAATTAGT
chr4	56758742	56758743	chr4:56758743:T:G	rs1564400	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr4	56872324	56872325	chr4:56872325:G:T	rs62308111	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.4444757986496235	6.897486599724689	ACTAATTAGC
chr4	56907428	56907429	chr4:56907429:C:G	rs1623306	C	G	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	56907434	56907435	chr4:56907435:C:T	rs71601658	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr4	57043124	57043125	chr4:57043125:A:G	rs1277273	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	57331955	57331956	chr4:57331956:G:A	rs2535496	G	A	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	58092264	58092265	chr4:58092265:T:C	rs7693098	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	58553201	58553202	chr4:58553202:T:C	rs4146127	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	58749449	58749450	chr4:58749450:A:G	rs28502245	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	58749482	58749483	chr4:58749483:G:A	rs28657427	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	58749492	58749493	chr4:58749493:G:C	rs28604384	G	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	58773440	58773441	chr4:58773441:G:C	rs12649827	G	C	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	59092034	59092035	chr4:59092035:T:C	rs2132343	T	C	C	Hoxd3.mouse_homeodomain_1	6	1	+	6.466705306321288	3.633754355151587	CCCAATTAGC
chr4	59194429	59194430	chr4:59194430:T:C	rs1502774	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	60580051	60580052	chr4:60580052:C:G	rs73821130	C	G	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	60669922	60669923	chr4:60669923:A:G	rs10033853	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	61506187	61506188	chr4:61506188:T:A	rs11131328	T	A	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	62200289	62200290	chr4:62200290:A:C	rs6551686	A	C	c	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	62772700	62772701	chr4:62772701:G:C	rs116777969	G	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr4	63057053	63057054	chr4:63057054:T:C	rs2346591	T	C	C	Hoxd3.mouse_homeodomain_1	6	1	+	7.273186104666311	4.44023515349661	GCTAATTAAG
chr4	63653203	63653204	chr4:63653204:G:A	rs921901	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.995853377711593	7.0639691987030195	GGCAATTAGC
chr4	64616684	64616685	chr4:64616685:C:T	rs4485830	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	64643238	64643239	chr4:64643239:C:T	rs11131556	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr4	64727633	64727634	chr4:64727634:G:A	rs72643277	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	64926944	64926945	chr4:64926945:G:A	rs7437430	G	A	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	65253777	65253778	chr4:65253778:C:T	rs54808	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	65590878	65590879	chr4:65590879:A:G	rs4566704	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	67013962	67013963	chr4:67013963:A:G	rs1383722	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	68398783	68398784	chr4:68398784:A:G	rs34530391	A	G	g	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr4	68572596	68572597	chr4:68572597:A:G	rs10029892	A	G	a	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	70311745	70311746	chr4:70311746:G:A	rs17148592	G	A	-	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	70488907	70488908	chr4:70488908:A:C	rs56697221	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	70584190	70584191	chr4:70584191:C:T	rs72652249	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	70704055	70704056	chr4:70704056:G:A	rs1243702388	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr4	72111466	72111467	chr4:72111467:C:G	rs114850563	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr4	72264665	72264666	chr4:72264666:A:C	chr4:72264666:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr4	72707038	72707039	chr4:72707039:T:A	rs16848539	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	72762010	72762011	chr4:72762011:T:C	rs7693945	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr4	72974332	72974333	chr4:72974333:G:T	rs1460986	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr4	73163003	73163004	chr4:73163004:G:A	rs7661799	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr4	73540997	73540998	chr4:73540998:A:T	rs10518115	A	T	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr4	73606550	73606551	chr4:73606551:G:A	rs17805665	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.901879681539695	6.516979999778085	AGCAATTAGG
chr4	74034828	74034829	chr4:74034829:A:C	rs538249417	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	74202242	74202243	chr4:74202243:C:T	chr4:74202243:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	7.501233327402089	AGCAATTAAG
chr4	74223893	74223894	chr4:74223894:T:G	rs1011017954	T	G	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.503391442821062	5.054235972546209	ACTAATTAAC
chr4	74418072	74418073	chr4:74418073:G:T	rs13435826	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	74933373	74933374	chr4:74933374:A:C	rs79974259	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.450525492992999	3.451139533030535	GCCAATTACC
chr4	74935148	74935149	chr4:74935149:A:T	rs144769377	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	75073751	75073752	chr4:75073752:C:T	rs17000203	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	75631607	75631608	chr4:75631608:G:A	rs3853183	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	76040901	76040902	chr4:76040902:G:A	rs4241581	G	A	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	76100134	76100135	chr4:76100135:G:C	rs7654988	G	C	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	76476861	76476862	chr4:76476862:A:G	rs10032549	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	76585862	76585863	chr4:76585863:A:G	chr4:76585863:A:G	A	G	a	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr4	76585886	76585887	chr4:76585887:G:A	rs1034601589	G	A	g	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	76607392	76607393	chr4:76607393:T:C	rs76941969	T	C	t	Hoxd3.mouse_homeodomain_1	3	1	-	7.341301925657738	5.352444023744556	ACTAATTAAG
chr4	76998642	76998643	chr4:76998643:C:T	rs11097631	C	T	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	77355405	77355406	chr4:77355406:C:G	rs10000203	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	77391148	77391149	chr4:77391149:A:T	rs72648584	A	T	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	77853742	77853743	chr4:77853743:A:T	rs4453957	A	T	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	78369044	78369045	chr4:78369045:A:G	rs66655467	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.741948279795344	3.881851836234596	ACCAATTAGG
chr4	78374410	78374411	chr4:78374411:G:A	rs116432230	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr4	78585760	78585761	chr4:78585761:A:G	rs78728705	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	78615491	78615492	chr4:78615492:T:C	rs11098275	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr4	79306080	79306081	chr4:79306081:C:A	rs10857087	C	A	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	79445617	79445618	chr4:79445618:C:T	rs114369353	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr4	79650873	79650874	chr4:79650874:T:G	rs4368633	T	G	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	79662458	79662459	chr4:79662459:C:T	rs62297653	C	T	c	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	79757988	79757989	chr4:79757989:A:C	rs11730157	A	C	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	80005846	80005847	chr4:80005847:C:T	rs12504282	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	80195689	80195690	chr4:80195690:G:A	rs115331160	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	80425815	80425816	chr4:80425816:G:A	rs7670914	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	80608225	80608226	chr4:80608226:T:C	rs2903671	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	80989909	80989910	chr4:80989910:T:G	rs28420618	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	7.056921200256407	3.216422023704339	AGTAATTACG
chr4	81432607	81432608	chr4:81432608:G:T	rs1035007	G	T	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	81461918	81461919	chr4:81461919:G:C	rs6535251	G	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	81524179	81524180	chr4:81524180:T:G	rs10213073	T	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	82090655	82090656	chr4:82090656:T:G	rs6820990	T	G	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	82352067	82352068	chr4:82352068:G:C	rs17005587	G	C	g	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	82360772	82360773	chr4:82360773:C:T	chr4:82360773:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	82500582	82500583	chr4:82500583:G:A	rs4693032	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	82621503	82621504	chr4:82621504:G:A	rs7356293	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	83454580	83454581	chr4:83454581:G:A	rs6535477	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	7.273186104666311	6.888286422904701	GCTAATTAAG
chr4	83605121	83605122	chr4:83605122:T:C	rs1521531	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	83837839	83837840	chr4:83837840:C:T	rs79189894	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.063900836764708	6.396180070061307	CGTAATTAAG
chr4	83837842	83837843	chr4:83837843:C:T	rs146759957	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	83885011	83885012	chr4:83885012:A:C	rs60617092	A	C	C	Hoxd3.mouse_homeodomain_1	3	1	+	7.376359977658197	6.279477285346397	GCTAATTAGC
chr4	83980173	83980174	chr4:83980174:T:G	rs1876117	T	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	83990090	83990091	chr4:83990091:C:G	rs1605135	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	85128925	85128926	chr4:85128926:T:C	rs13133142	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.150894896428305	6.61045689473735	GGTAATTACC
chr4	85128926	85128927	chr4:85128927:A:C	rs79195160	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.150894896428305	6.054012204116505	GGTAATTACC
chr4	85650900	85650901	chr4:85650901:G:A	rs7655020	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.995853377711593	7.0639691987030195	GGCAATTAGC
chr4	85677164	85677165	chr4:85677165:A:G	rs10012334	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	85712330	85712331	chr4:85712331:T:A	rs13128115	T	A	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	85933510	85933511	chr4:85933511:A:G	rs346501	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	86552995	86552996	chr4:86552996:T:C	rs111721938	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr4	86553001	86553002	chr4:86553002:C:T	rs112072272	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	86664170	86664171	chr4:86664171:C:T	rs78405897	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr4	87822388	87822389	chr4:87822389:G:A	rs11734956	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	87858015	87858016	chr4:87858016:C:T	rs4147244	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	87896261	87896262	chr4:87896262:G:C	rs2169612	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.904037796958669	6.518641313984426	ACCAATTAGC
chr4	87896278	87896279	chr4:87896279:G:A	rs2169611	G	A	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	87935189	87935190	chr4:87935190:A:G	rs1463116	A	G	-	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	88341653	88341654	chr4:88341654:G:A	rs75932624	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.122884842874458	6.455164076171057	AGCAATTAAC
chr4	88341660	88341661	chr4:88341661:A:G	rs559230889	A	G	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.122884842874458	7.0639691987030195	AGCAATTAAC
chr4	88601469	88601470	chr4:88601470:G:T	rs3796660	G	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	88709877	88709878	chr4:88709878:A:G	rs2972030	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	89119695	89119696	chr4:89119696:A:G	rs10433881	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	89907073	89907074	chr4:89907074:T:A	chr4:89907074:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	91340524	91340525	chr4:91340525:G:T	rs4593093	G	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	93269638	93269639	chr4:93269639:A:T	rs1433669	A	T	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	93269640	93269641	chr4:93269641:T:C	rs1433670	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	94642659	94642660	chr4:94642660:A:G	chr4:94642660:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	94642662	94642663	chr4:94642663:G:A	rs77285346	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr4	94714808	94714809	chr4:94714809:T:C	rs11934616	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr4	95640372	95640373	chr4:95640373:A:G	rs78732903	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	95802045	95802046	chr4:95802046:A:G	rs17024571	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	95895562	95895563	chr4:95895563:C:T	rs6849545	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	96527568	96527569	chr4:96527569:T:C	rs7670117	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr4	97070918	97070919	chr4:97070919:A:T	rs28691197	A	T	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	98203556	98203557	chr4:98203557:G:C	rs10018670	G	C	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	98619921	98619922	chr4:98619922:A:G	rs11946198	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	98619942	98619943	chr4:98619943:T:C	rs11941880	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.989302180477614	5.000444278564432	GGTAATTAGA
chr4	99618738	99618739	chr4:99618739:T:C	rs1032355	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.732748102975356	3.872651659414608	GCCAATTAAG
chr4	99657923	99657924	chr4:99657924:C:G	rs17029292	C	G	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	99749551	99749552	chr4:99749552:G:C	rs28539760	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	99749557	99749558	chr4:99749558:T:C	rs1365488	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	99787502	99787503	chr4:99787503:A:G	rs6835592	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	99787528	99787529	chr4:99787529:C:A	rs11097675	C	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr4	99800585	99800586	chr4:99800586:C:T	rs9991185	C	T	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	99821450	99821451	chr4:99821451:G:A	rs6814895	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	99827207	99827208	chr4:99827208:C:T	rs57798058	C	T	c	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr4	100516184	100516185	chr4:100516185:G:T	rs1501093	G	T	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	100721449	100721450	chr4:100721450:T:C	rs1396286	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	100937107	100937108	chr4:100937108:G:T	rs111273229	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	6.460278008989569	GGTAATTAGA
chr4	100982135	100982136	chr4:100982136:A:G	chr4:100982136:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	100989784	100989785	chr4:100989785:A:G	rs1532443	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr4	101162734	101162735	chr4:101162735:A:C	rs2695219	A	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	101256426	101256427	chr4:101256427:T:C	rs150558146	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	101260901	101260902	chr4:101260902:A:G	rs962386	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.501233327402089	6.960795325711134	AGTAATTAAG
chr4	102223553	102223554	chr4:102223554:C:T	rs151408	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr4	102402837	102402838	chr4:102402838:G:A	rs11730344	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	102431916	102431917	chr4:102431917:G:C	rs2045797	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	103089330	103089331	chr4:103089331:A:C	rs72665040	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.6738324588039175	5.576949766492117	GCCAATTAGG
chr4	103089337	103089338	chr4:103089338:G:A	rs736048	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	103276784	103276785	chr4:103276785:G:C	rs4698891	G	C	g	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr4	103293387	103293388	chr4:103293388:G:A	rs28420729	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	103567006	103567007	chr4:103567007:T:A	rs418405	T	A	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	103567009	103567010	chr4:103567010:A:G	rs139571249	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	103567030	103567031	chr4:103567031:T:C	rs447619	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	103722126	103722127	chr4:103722127:G:T	rs76273563	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	104860244	104860245	chr4:104860245:G:A	rs7654860	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	104966605	104966606	chr4:104966606:A:G	rs1388036	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	105619540	105619541	chr4:105619541:A:G	rs78277158	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	106114448	106114449	chr4:106114449:C:T	rs56260521	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.225990353928032	6.558269587224632	CGTAATTAAC
chr4	106507789	106507790	chr4:106507790:G:C	rs2049207	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	107305939	107305940	chr4:107305940:T:C	rs7674599	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	107392500	107392501	chr4:107392501:C:A	rs10488873	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	108350620	108350621	chr4:108350621:C:T	rs917412	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	108795683	108795684	chr4:108795684:T:A	rs62313082	T	A	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	108957706	108957707	chr4:108957707:C:T	rs12639812	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	109356372	109356373	chr4:109356373:C:A	rs28432264	C	A	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	109913763	109913764	chr4:109913764:A:G	rs11098053	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.663322844565413	4.803226401004666	AGTAATTAAC
chr4	111563015	111563016	chr4:111563016:C:A	rs7663202	C	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	7.150894896428305	6.603905697503371	GGTAATTACC
chr4	111576795	111576796	chr4:111576796:C:T	rs9992389	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	112009357	112009358	chr4:112009358:C:T	rs72682352	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr4	112147873	112147874	chr4:112147874:C:G	rs1025609	C	G	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	112557978	112557979	chr4:112557979:G:A	rs6533627	G	A	a	Hoxd3.mouse_homeodomain_1	0	1	+	7.376359977658197	7.4444757986496235	GCTAATTAGC
chr4	112927885	112927886	chr4:112927886:T:A	rs12503758	T	A	A	Hoxd3.mouse_homeodomain_1	6	1	+	6.962953441130107	4.142367047344833	ACCAATTAAC
chr4	113051644	113051645	chr4:113051645:C:T	rs72671573	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	113436587	113436588	chr4:113436588:C:T	rs17046037	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	113542165	113542166	chr4:113542166:G:A	rs73841676	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	113789137	113789138	chr4:113789138:A:G	rs6850980	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	114091886	114091887	chr4:114091887:T:C	rs17046808	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	114178677	114178678	chr4:114178678:A:C	rs112257838	A	C	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr4	114378614	114378615	chr4:114378615:A:G	rs111572398	A	G	a	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr4	114400745	114400746	chr4:114400746:G:A	rs148474905	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	114563571	114563572	chr4:114563572:C:G	rs13110751	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	115375422	115375423	chr4:115375423:G:A	rs11736340	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	115973442	115973443	chr4:115973443:A:C	rs13151079	A	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	116400733	116400734	chr4:116400734:T:A	rs72685175	T	A	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	116477961	116477962	chr4:116477962:C:A	rs79191738	C	A	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	116981432	116981433	chr4:116981433:T:C	rs538192335	T	C	t	Hoxd3.mouse_homeodomain_1	4	1	-	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr4	119900838	119900839	chr4:119900839:T:C	rs13132107	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	119900881	119900882	chr4:119900882:A:G	rs6534160	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	120305161	120305162	chr4:120305162:G:A	rs2715959	G	A	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr4	120488952	120488953	chr4:120488953:G:A	rs17050611	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	120696129	120696130	chr4:120696130:A:C	rs11729301	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	120858689	120858690	chr4:120858690:C:T	rs34371247	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	121459337	121459338	chr4:121459338:T:G	rs691403	T	G	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	121612780	121612781	chr4:121612781:T:C	rs17442542	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	121940237	121940238	chr4:121940238:G:C	rs72919980	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr4	121940270	121940271	chr4:121940271:C:T	rs4833779	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.892679504719707	6.960795325711134	GGCAATTAAG
chr4	122760000	122760001	chr4:122760001:C:A	rs309375	C	A	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	123649351	123649352	chr4:123649352:A:G	rs2589858	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	124086937	124086938	chr4:124086938:T:A	rs77641981	T	A	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	124204287	124204288	chr4:124204288:T:A	rs140923465	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	124279934	124279935	chr4:124279935:C:A	rs892243843	C	A	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	124527101	124527102	chr4:124527102:A:G	rs312492	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	124591534	124591535	chr4:124591535:A:G	rs2048264	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	124596468	124596469	chr4:124596469:C:G	rs486818	C	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr4	124596469	124596470	chr4:124596470:G:A	rs539355	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	125187920	125187921	chr4:125187921:T:C	rs7670534	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	125255071	125255072	chr4:125255072:A:T	rs955186	A	T	T	Hoxd3.mouse_homeodomain_1	6	1	-	7.063900836764708	4.243314442979433	CGTAATTAAG
chr4	125284656	125284657	chr4:125284657:T:A	rs72673236	T	A	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	125493303	125493304	chr4:125493304:A:G	rs10008986	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr4	125493304	125493305	chr4:125493305:T:G	rs12641803	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	127012804	127012805	chr4:127012805:C:T	rs17210835	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	128316368	128316369	chr4:128316369:T:G	rs12645655	T	G	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	128393406	128393407	chr4:128393407:C:T	rs17013261	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr4	129092790	129092791	chr4:129092791:T:C	rs184925931	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	129309586	129309587	chr4:129309587:G:A	rs13140619	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	129358784	129358785	chr4:129358785:G:A	rs56108227	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	131258371	131258372	chr4:131258372:G:A	rs6534832	G	A	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	132180482	132180483	chr4:132180483:T:C	rs77882680	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr4	132870645	132870646	chr4:132870646:C:T	rs6847018	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr4	132870648	132870649	chr4:132870649:G:A	rs6847328	G	A	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr4	133132727	133132728	chr4:133132728:A:G	rs62311797	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	133148828	133148829	chr4:133148829:C:T	chr4:133148829:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.540805396797378	7.081243398488333	GCCAATTAGT
chr4	133302813	133302814	chr4:133302814:G:A	rs1346065	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	133534461	133534462	chr4:133534462:T:G	rs11725788	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.122884842874458	3.2823856663223907	AGCAATTAAC
chr4	133556655	133556656	chr4:133556656:G:A	rs1032440	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	133590054	133590055	chr4:133590055:C:T	rs1911559	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.700736798541729	6.0330160318383275	GGCAATTAGT
chr4	133996870	133996871	chr4:133996871:C:A	rs147340323	C	A	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr4	134301664	134301665	chr4:134301665:A:T	rs10033808	A	T	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	135173519	135173520	chr4:135173520:T:G	rs10009456	T	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	137082474	137082475	chr4:137082475:A:T	rs1198307841	A	T	a	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	137292070	137292071	chr4:137292071:G:A	rs7670687	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	137532903	137532904	chr4:137532904:C:A	rs1008567891	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.892679504719707	6.208608681405544	GGCAATTAAG
chr4	138672177	138672178	chr4:138672178:T:G	rs28552375	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	138857417	138857418	chr4:138857418:C:G	rs62322142	C	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	139501231	139501232	chr4:139501232:A:G	rs6842056	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	5.898970685399792	-0.941586539018867	GGCCATTAGC
chr4	139666589	139666590	chr4:139666590:G:C	rs8192008	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	139749701	139749702	chr4:139749702:C:T	rs114927941	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr4	139833389	139833390	chr4:139833390:T:C	rs145889656	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	139958873	139958874	chr4:139958874:A:G	rs115966786	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	140094313	140094314	chr4:140094314:T:C	rs140244561	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr4	140253238	140253239	chr4:140253239:T:C	rs923435080	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.0639691987030195	4.231018247533318	AGCAATTAGC
chr4	140615541	140615542	chr4:140615542:C:T	rs142872728	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.901879681539695	7.44231768323065	AGCAATTAGG
chr4	140864996	140864997	chr4:140864997:A:G	rs729242	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.433117506410662	3.2765581050740518	GGTAATTAAG
chr4	140986256	140986257	chr4:140986257:C:T	rs10222880	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	141021204	141021205	chr4:141021205:G:A	rs2059499	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	+	6.304615789157963	5.919716107396353	CCCAATTAGG
chr4	141091232	141091233	chr4:141091233:T:A	rs56201046	T	A	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	141154895	141154896	chr4:141154896:A:G	rs4956352	A	G	a	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr4	141238320	141238321	chr4:141238321:T:C	rs1435128	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	141238356	141238357	chr4:141238357:C:T	rs1435127	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr4	141301119	141301120	chr4:141301120:G:T	rs7659705	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr4	141391677	141391678	chr4:141391678:A:G	rs151101256	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr4	141962945	141962946	chr4:141962946:T:C	rs11100737	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr4	142296237	142296238	chr4:142296238:T:C	rs2172023	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.904037796958669	4.043941353397921	ACCAATTAGC
chr4	143996462	143996463	chr4:143996463:T:C	rs6537238	T	C	c	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	144291240	144291241	chr4:144291241:G:A	rs11100844	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	146106076	146106077	chr4:146106077:G:A	rs4835283	G	A	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	146132953	146132954	chr4:146132954:G:A	rs74448418	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	-	7.273186104666311	6.7490466830965	GCTAATTAAG
chr4	146465124	146465125	chr4:146465125:A:C	rs72729894	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	146486222	146486223	chr4:146486223:C:A	rs4835039	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	146646048	146646049	chr4:146646049:G:C	chr4:146646049:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	146958840	146958841	chr4:146958841:C:T	rs748828	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	147464666	147464667	chr4:147464667:C:T	rs114701438	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	148016385	148016386	chr4:148016386:C:G	rs10213171	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.44231768323065	7.056921200256407	AGTAATTAGG
chr4	148049385	148049386	chr4:148049386:C:T	rs34580209	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.004985192593269	6.8451776907511785	CGTAATTAGG
chr4	148430966	148430967	chr4:148430967:G:A	rs17582206	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	150569676	150569677	chr4:150569677:G:A	rs1504783	G	A	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	150578287	150578288	chr4:150578288:A:G	rs10022844	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	151887524	151887525	chr4:151887525:G:A	rs58843921	G	A	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	151992591	151992592	chr4:151992592:T:C	rs140365649	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.376359977658197	6.835921975967242	GCTAATTAGC
chr4	151992594	151992595	chr4:151992595:T:C	rs360935	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.376359977658197	0.5358027532395374	GCTAATTAGC
chr4	152021756	152021757	chr4:152021757:A:G	rs17028395	A	G	a	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	152109491	152109492	chr4:152109492:C:T	rs1013780019	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	152109505	152109506	chr4:152109506:G:A	rs13147317	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	152572492	152572493	chr4:152572493:C:T	rs78209474	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	152709946	152709947	chr4:152709947:T:G	rs12499895	T	G	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	152982795	152982796	chr4:152982796:C:T	rs72970353	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr4	153082464	153082465	chr4:153082465:C:T	rs74569372	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	153083895	153083896	chr4:153083896:C:A	rs1516683	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	153491399	153491400	chr4:153491400:C:T	rs74537360	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	153764559	153764560	chr4:153764560:A:C	rs1020702	A	C	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	153929682	153929683	chr4:153929683:A:G	rs11099924	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.678572715728777	6.61045689473735	AGCAATTACC
chr4	155047975	155047976	chr4:155047976:G:A	rs28366607	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	155582287	155582288	chr4:155582288:G:A	rs1483041	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	155831498	155831499	chr4:155831499:T:C	rs6536098	T	C	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	155942099	155942100	chr4:155942100:T:C	rs13128318	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	156085052	156085053	chr4:156085053:A:T	rs4488897	A	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	156461331	156461332	chr4:156461332:C:A	rs80170108	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.220683642931706	5.673694444006772	GGTAATGAGC
chr4	156575661	156575662	chr4:156575662:C:T	rs13347293	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr4	157076541	157076542	chr4:157076542:A:G	rs79925137	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	157076567	157076568	chr4:157076568:A:G	rs80301105	A	G	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	157129118	157129119	chr4:157129119:G:A	rs73856838	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr4	157327880	157327881	chr4:157327881:A:G	rs4691394	A	G	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr4	157557641	157557642	chr4:157557642:T:C	rs58466103	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	157844524	157844525	chr4:157844525:A:G	rs6536284	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	159215842	159215843	chr4:159215843:T:A	rs10013232	T	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	159546790	159546791	chr4:159546791:A:G	rs4473617	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.904037796958669	4.043941353397921	ACCAATTAGC
chr4	159871395	159871396	chr4:159871396:T:C	rs1457807	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	160745214	160745215	chr4:160745215:G:A	rs10011041	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	161091384	161091385	chr4:161091385:G:C	rs17303353	G	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	161186841	161186842	chr4:161186842:T:C	rs2872188	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr4	161656997	161656998	chr4:161656998:C:A	rs11724691	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	162158723	162158724	chr4:162158724:A:G	rs12508498	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr4	162759178	162759179	chr4:162759179:A:C	rs117906929	A	C	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	162782930	162782931	chr4:162782931:G:A	rs9997394	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	163164772	163164773	chr4:163164773:A:C	rs17471663	A	C	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr4	163402979	163402980	chr4:163402980:C:T	rs76413293	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr4	163447344	163447345	chr4:163447345:C:A	rs117258812	C	A	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	163793774	163793775	chr4:163793775:T:C	rs7695742	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.989302180477614	4.129205736916866	GGTAATTAGA
chr4	164136572	164136573	chr4:164136573:C:T	rs74591613	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr4	164509123	164509124	chr4:164509124:G:A	rs4079692	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	164731540	164731541	chr4:164731541:C:T	rs6824758	C	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr4	165440823	165440824	chr4:165440824:G:A	rs183320380	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr4	166014737	166014738	chr4:166014738:T:A	rs45578631	T	A	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.901879681539695	6.304739689060224	AGCAATTAGG
chr4	166733889	166733890	chr4:166733890:G:A	rs62352805	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	167492181	167492182	chr4:167492182:A:T	rs2873937	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.2190107174197315	5.129513385589154	AGTAATTACC
chr4	168125556	168125557	chr4:168125557:G:A	rs17635986	G	A	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr4	168497935	168497936	chr4:168497936:G:A	rs28575424	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	168644017	168644018	chr4:168644018:C:T	rs72982800	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	168816560	168816561	chr4:168816561:G:A	rs13124822	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr4	168865420	168865421	chr4:168865421:G:A	chr4:168865421:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	168865455	168865456	chr4:168865456:G:A	rs1184278473	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr4	169305453	169305454	chr4:169305454:T:C	rs4692707	T	C	T	Hoxd3.mouse_homeodomain_1	9	1	+	6.540805396797378	6.835921975967242	GCCAATTAGT
chr4	169661153	169661154	chr4:169661154:C:T	rs536637210	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	169975358	169975359	chr4:169975359:C:T	rs6836334	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.241240225091396	5.891466675391467	CGCAATTACC
chr4	169975387	169975388	chr4:169975388:T:C	rs76274540	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr4	170004660	170004661	chr4:170004661:A:G	rs777531664	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr4	170226452	170226453	chr4:170226453:C:T	rs10023585	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.6738324588039175	6.288932777042308	GCCAATTAGG
chr4	170873035	170873036	chr4:170873036:C:T	rs1367998	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	171718728	171718729	chr4:171718729:A:G	rs28690887	A	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr4	171880513	171880514	chr4:171880514:A:T	rs75387688	A	T	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	173106004	173106005	chr4:173106005:C:T	rs28709360	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr4	173530354	173530355	chr4:173530355:C:T	rs530297537	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.995853377711593	7.0639691987030195	GGCAATTAGC
chr4	174156500	174156501	chr4:174156501:C:T	rs11734349	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	174522170	174522171	chr4:174522171:A:G	rs45463692	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.8337638605482685	3.9736674169875204	GGCAATTAGG
chr4	176261136	176261137	chr4:176261137:T:C	rs75616989	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr4	176308408	176308409	chr4:176308409:A:G	rs11133143	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	176444100	176444101	chr4:176444101:C:T	rs6851508	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	176753033	176753034	chr4:176753034:A:G	rs140903782	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.122884842874458	4.262788399313711	AGCAATTAAC
chr4	176979613	176979614	chr4:176979614:G:T	rs6845087	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	177751368	177751369	chr4:177751369:G:A	rs4690561	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	178090987	178090988	chr4:178090988:A:T	rs57027014	A	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr4	178148410	178148411	chr4:178148411:T:C	rs680344	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr4	178309987	178309988	chr4:178309988:G:T	rs4862460	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	178977012	178977013	chr4:178977013:T:C	rs13102434	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	179973757	179973758	chr4:179973758:G:A	rs12715831	G	A	g	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr4	180020489	180020490	chr4:180020490:A:T	rs2309135	A	T	.	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr4	180378420	180378421	chr4:180378421:T:C	rs11937621	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	180564651	180564652	chr4:180564652:G:A	rs56882171	G	A	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	180887776	180887777	chr4:180887777:C:G	rs4558903	C	G	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	180933334	180933335	chr4:180933335:C:T	rs2056489	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	181083412	181083413	chr4:181083413:T:A	rs12499877	T	A	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	181484581	181484582	chr4:181484582:A:G	rs6822070	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr4	181554193	181554194	chr4:181554194:C:T	rs62340717	C	T	c	Hoxd3.mouse_homeodomain_1	9	1	-	7.056921200256407	6.672021518494797	AGTAATTACG
chr4	181637603	181637604	chr4:181637604:A:G	rs12510543	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr4	181660420	181660421	chr4:181660421:G:T	rs145590166	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	181693405	181693406	chr4:181693406:T:G	rs2309573	T	G	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.595207023573987	5.1460515532991336	GGTAATTAAC
chr4	181827190	181827191	chr4:181827191:G:A	rs4862010	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.904037796958669	6.608921217788804	ACCAATTAGC
chr4	182451806	182451807	chr4:182451807:G:C	rs17255303	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.960795325711134	6.800863923966783	AGCAATTAAG
chr4	182556454	182556455	chr4:182556455:G:A	rs7686685	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	182880795	182880796	chr4:182880796:G:A	rs76788733	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr4	182880825	182880826	chr4:182880826:C:T	rs150297972	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	183020936	183020937	chr4:183020937:T:C	rs2603357	T	C	a	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr4	183020940	183020941	chr4:183020941:T:C	rs7660509	T	C	t	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr4	183280732	183280733	chr4:183280733:T:C	rs34842178	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr4	183280755	183280756	chr4:183280756:G:A	rs11132173	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	183363067	183363068	chr4:183363068:G:A	rs1027984	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.464547190902314	6.304739689060224	CGCAATTAGG
chr4	183402829	183402830	chr4:183402830:C:A	rs17074740	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	183440892	183440893	chr4:183440893:T:C	rs4862197	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	183541745	183541746	chr4:183541746:A:G	rs77156085	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr4	184200494	184200495	chr4:184200495:T:G	rs10004636	T	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	184746249	184746250	chr4:184746250:C:T	rs2171838	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.30929062122411	6.64156985452071	AGTAATTAGT
chr4	184765701	184765702	chr4:184765702:C:G	rs3792314	C	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	184802656	184802657	chr4:184802657:C:T	rs55818612	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr4	184899795	184899796	chr4:184899796:A:G	rs61005773	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	185127234	185127235	chr4:185127235:T:A	rs67238349	T	A	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	185150777	185150778	chr4:185150778:A:G	rs11729551	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr4	185232961	185232962	chr4:185232962:T:C	rs12509232	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr4	185236023	185236024	chr4:185236024:C:G	rs13118983	C	G	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr4	185538000	185538001	chr4:185538001:A:G	rs11132318	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	185916876	185916877	chr4:185916877:C:T	rs11727879	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr4	185988323	185988324	chr4:185988324:A:G	rs7688658	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	186038243	186038244	chr4:186038244:A:G	rs765333324	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.007267207914503	5.018409306001321	TGTAATTAGC
chr4	186104676	186104677	chr4:186104677:A:G	rs115973251	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	186516160	186516161	chr4:186516161:G:A	rs7699670	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr4	186808459	186808460	chr4:186808460:T:C	rs1019895	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr4	186904640	186904641	chr4:186904641:A:G	rs34214857	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.464547190902314	-0.37601003351634577	CGCAATTAGG
chr4	186948923	186948924	chr4:186948924:G:A	rs28490930	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr4	187128435	187128436	chr4:187128436:G:A	rs148521484	G	A	.	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	188452252	188452253	chr4:188452253:T:C	rs11132553	T	C	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr4	188452256	188452257	chr4:188452257:T:C	rs403282	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	30806	30807	chr5:30807:C:T	rs188114595	C	T	.	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	102665	102666	chr5:102666:T:C	rs9313247	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	129863	129864	chr5:129864:A:G	rs62344115	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	197064	197065	chr5:197065:A:G	rs12654859	A	G	-	Hoxd3.mouse_homeodomain_1	8	1	+	7.063900836764708	7.004985192593269	CGTAATTAAG
chr5	197074	197075	chr5:197075:A:G	rs140417889	A	G	-	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr5	246036	246037	chr5:246037:T:C	rs11133943	T	C	c	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	457839	457840	chr5:457840:A:G	rs2251843	A	G	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	722756	722757	chr5:722757:C:T	rs2455348	C	T	c	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	1296611	1296612	chr5:1296612:C:T	rs33977403	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr5	1756710	1756711	chr5:1756711:A:C	rs1029375193	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	1966143	1966144	chr5:1966144:C:G	rs73735141	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr5	2258423	2258424	chr5:2258424:A:T	rs56731253	A	T	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.066058952183682	6.2719732753380715	CCTAATTAAC
chr5	2346506	2346507	chr5:2346507:A:G	rs468976	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	2564886	2564887	chr5:2564887:T:A	rs1126232	T	A	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	2675830	2675831	chr5:2675831:C:A	rs10045053	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	3023687	3023688	chr5:3023688:G:T	rs74759324	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	3120210	3120211	chr5:3120211:C:G	rs573405017	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	3130642	3130643	chr5:3130643:T:G	rs17622567	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	3197948	3197949	chr5:3197949:C:G	chr5:3197949:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr5	3265574	3265575	chr5:3265575:C:T	rs1441534	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	3269460	3269461	chr5:3269461:C:T	rs78685648	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	3269487	3269488	chr5:3269488:T:C	rs16871553	T	C	T	Hoxd3.mouse_homeodomain_1	9	1	+	7.241174800232684	7.536291379402548	GGTAATTAGT
chr5	3308469	3308470	chr5:3308470:T:C	rs9313043	T	C	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr5	3425184	3425185	chr5:3425185:A:T	rs411929	A	T	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	4022165	4022166	chr5:4022166:G:T	rs493476	G	T	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	4375460	4375461	chr5:4375461:A:C	rs261128	A	C	-	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	4913114	4913115	chr5:4913115:A:G	rs6879578	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	5248685	5248686	chr5:5248686:T:C	rs12659315	T	C	.	Hoxd3.mouse_homeodomain_1	4	1	-	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr5	5313702	5313703	chr5:5313703:A:G	rs13168665	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	5315237	5315238	chr5:5315238:T:C	rs66605734	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.61045689473735	2.4538974934007403	GGCAATTACC
chr5	5315247	5315248	chr5:5315248:C:T	rs72726055	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	5585061	5585062	chr5:5585062:T:A	rs73037038	T	A	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	6159691	6159692	chr5:6159692:A:G	rs77578019	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr5	6400182	6400183	chr5:6400183:C:T	rs73046070	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	6400183	6400184	chr5:6400184:G:A	rs760680217	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	6431509	6431510	chr5:6431510:G:A	rs80222806	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr5	6745761	6745762	chr5:6745762:A:G	rs427394	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	6887114	6887115	chr5:6887115:A:G	rs13156798	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.700736798541729	3.840640354980981	GGCAATTAGT
chr5	8867262	8867263	chr5:8867263:G:A	rs4702596	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.732748102975356	7.273186104666311	GCCAATTAAG
chr5	9161299	9161300	chr5:9161300:A:G	rs3846574	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr5	9188083	9188084	chr5:9188084:G:A	rs56738322	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	9188115	9188116	chr5:9188116:T:C	rs79394450	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	9196782	9196783	chr5:9196783:G:C	rs2074608	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	9351620	9351621	chr5:9351621:T:A	rs1918777	T	A	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	9353775	9353776	chr5:9353776:T:C	rs2696372	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.604407200393974	4.744310756833228	AGTAATTAGC
chr5	9715999	9716000	chr5:9716000:T:C	rs114950286	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	10132680	10132681	chr5:10132681:C:T	rs1395096	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr5	10706913	10706914	chr5:10706914:G:A	rs2930052	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	10706954	10706955	chr5:10706955:C:T	rs74520780	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr5	10837049	10837050	chr5:10837050:T:G	rs79307238	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.4444757986496235	3.5373807405486897	ACTAATTAGC
chr5	11331117	11331118	chr5:11331118:T:C	rs11748294	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	11638161	11638162	chr5:11638162:C:T	rs80088375	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr5	13347057	13347058	chr5:13347058:G:A	rs11958368	G	A	-	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	13943815	13943816	chr5:13943816:C:T	rs16902963	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr5	13945002	13945003	chr5:13945003:T:G	rs1297531859	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr5	13945003	13945004	chr5:13945004:A:C	rs1382656953	A	C	a	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr5	14046996	14046997	chr5:14046997:G:T	rs77309392	G	T	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.288435975829675	6.732748102975356	GCCAATTACG
chr5	14102650	14102651	chr5:14102651:A:G	rs2119378	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	14264919	14264920	chr5:14264920:G:T	rs77239684	G	T	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	14298639	14298640	chr5:14298640:C:A	chr5:14298640:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	14302378	14302379	chr5:14302379:T:C	rs16903375	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	14356398	14356399	chr5:14356399:T:C	rs114899800	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.44231768323065	4.609366732060948	AGTAATTAGG
chr5	14545432	14545433	chr5:14545433:G:C	chr5:14545433:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr5	14862423	14862424	chr5:14862424:A:C	rs2250746	A	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	15501446	15501447	chr5:15501447:T:A	chr5:15501447:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	16492958	16492959	chr5:16492959:G:A	rs79754471	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr5	16751968	16751969	chr5:16751969:T:G	rs10223242	T	G	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr5	16916864	16916865	chr5:16916865:A:C	rs77446794	A	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	16916865	16916866	chr5:16916866:A:C	rs74865015	A	C	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	17115990	17115991	chr5:17115991:C:T	rs181426825	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	17352489	17352490	chr5:17352490:G:A	rs57275523	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	17413535	17413536	chr5:17413536:T:C	rs57190843	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	17890131	17890132	chr5:17890132:A:G	rs7707189	A	G	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	18334932	18334933	chr5:18334933:C:T	rs2036328	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	18744792	18744793	chr5:18744793:G:T	rs113337207	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr5	18921412	18921413	chr5:18921413:G:A	rs58111021	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	18985628	18985629	chr5:18985629:C:T	rs11747098	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	19175304	19175305	chr5:19175305:C:T	rs13176332	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	19301410	19301411	chr5:19301411:C:T	rs60325089	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	19462135	19462136	chr5:19462136:A:G	rs365009	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	19771844	19771845	chr5:19771845:G:A	rs73761822	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	19790974	19790975	chr5:19790975:C:G	rs10473158	C	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr5	19930216	19930217	chr5:19930217:A:G	rs12518927	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.282386281486299	0.4418290570676392	ACTAATTAGG
chr5	19942872	19942873	chr5:19942873:T:A	rs556278923	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr5	21198180	21198181	chr5:21198181:C:T	rs294116	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	21237289	21237290	chr5:21237290:C:T	rs142696684	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	22844984	22844985	chr5:22844985:C:T	rs12521133	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.732748102975356	7.273186104666311	GCCAATTAAG
chr5	22924591	22924592	chr5:22924592:T:C	rs7448782	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	22946492	22946493	chr5:22946493:C:T	rs11748547	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	23217457	23217458	chr5:23217458:G:A	rs10473629	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	23639409	23639410	chr5:23639410:A:G	rs4404643	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	24538655	24538656	chr5:24538656:G:T	rs138554938	G	T	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	26229355	26229356	chr5:26229356:C:T	rs35307968	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	26624030	26624031	chr5:26624031:C:A	rs7717122	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr5	27993551	27993552	chr5:27993552:C:A	rs30808	C	A	c	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	30841586	30841587	chr5:30841587:T:G	rs6892503	T	G	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr5	30850687	30850688	chr5:30850688:A:G	rs1882202	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	31891057	31891058	chr5:31891058:A:T	rs12514714	A	T	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	31907417	31907418	chr5:31907418:G:A	rs6867438	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	32028542	32028543	chr5:32028543:C:G	rs4333331	C	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	32028580	32028581	chr5:32028581:C:T	rs4642384	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr5	32803762	32803763	chr5:32803763:A:G	rs73073702	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.904037796958669	4.071086845788967	ACCAATTAGC
chr5	33688926	33688927	chr5:33688927:C:T	rs67600960	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	34504027	34504028	chr5:34504028:A:G	rs114504825	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.501233327402089	4.641136883841342	AGTAATTAAG
chr5	34519615	34519616	chr5:34519616:C:A	rs4703443	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.4444757986496235	6.897486599724689	ACTAATTAGC
chr5	34525705	34525706	chr5:34525706:G:A	rs73079170	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr5	34527089	34527090	chr5:34527090:T:G	rs189838969	T	G	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	34527111	34527112	chr5:34527112:G:A	rs59388963	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	34604294	34604295	chr5:34604295:G:A	rs11738244	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	34623256	34623257	chr5:34623257:T:C	rs111414896	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	34700899	34700900	chr5:34700900:T:C	rs7709378	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr5	35068145	35068146	chr5:35068146:G:C	rs78373811	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr5	35146762	35146763	chr5:35146763:C:T	rs1587605	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	7.433117506410662	7.048217824649052	GGTAATTAAG
chr5	35238406	35238407	chr5:35238407:A:G	rs7728298	A	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	35649562	35649563	chr5:35649563:T:G	rs80047215	T	G	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.44231768323065	6.126709946759808	AGTAATTAGG
chr5	35772212	35772213	chr5:35772213:G:A	rs4869623	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	35831600	35831601	chr5:35831601:C:T	rs6872233	C	T	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr5	36090226	36090227	chr5:36090227:C:T	chr5:36090227:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	36152485	36152486	chr5:36152486:G:A	rs143239170	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	36258889	36258890	chr5:36258890:T:C	rs73081933	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.904037796958669	4.915179895045487	ACCAATTAGC
chr5	36302167	36302168	chr5:36302168:A:G	rs73751633	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	36404554	36404555	chr5:36404555:C:T	rs6888731	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	36495366	36495367	chr5:36495367:C:T	rs146224221	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.619588709619026	6.269815159919097	CGTAATTACG
chr5	36520159	36520160	chr5:36520160:T:A	rs66702892	T	A	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	36667370	36667371	chr5:36667371:T:A	rs75882000	T	A	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	36730901	36730902	chr5:36730902:A:G	rs245674	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	37619789	37619790	chr5:37619790:C:T	rs7713017	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	37849585	37849586	chr5:37849586:G:A	rs1862573	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	38381601	38381602	chr5:38381602:A:G	rs2731969	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.466705306321288	-0.3738519180973717	CCCAATTAGC
chr5	38827893	38827894	chr5:38827894:G:A	rs670633	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr5	38872928	38872929	chr5:38872929:C:A	rs141451503	C	A	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	39074193	39074194	chr5:39074194:G:C	rs2303808	G	C	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr5	39468990	39468991	chr5:39468991:A:G	rs6451426	A	G	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.435275621829636	7.376359977658197	GCTAATTAAC
chr5	39613230	39613231	chr5:39613231:G:C	rs13189462	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr5	39692206	39692207	chr5:39692207:T:G	rs75973381	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.501233327402089	7.056921200256407	AGTAATTAAG
chr5	39692229	39692230	chr5:39692230:C:T	rs10512712	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	39907054	39907055	chr5:39907055:T:G	rs1113439	T	G	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	40220203	40220204	chr5:40220204:T:A	rs72746148	T	A	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr5	40694694	40694695	chr5:40694695:T:C	rs6871999	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	42189797	42189798	chr5:42189798:C:G	rs10079521	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	42390302	42390303	chr5:42390303:G:A	rs4866892	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	42513413	42513414	chr5:42513414:C:A	rs4866931	C	A	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	42839260	42839261	chr5:42839261:C:G	rs11749941	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	42846773	42846774	chr5:42846774:G:T	rs11953554	G	T	.	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr5	42879884	42879885	chr5:42879885:T:C	rs74726287	T	C	t	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	42893739	42893740	chr5:42893740:G:A	rs72759061	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	43017698	43017699	chr5:43017699:G:A	rs994457576	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	+	6.9888053792649805	6.321084612561579	GGTAATTACG
chr5	43194234	43194235	chr5:43194235:T:C	rs887752234	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	43358244	43358245	chr5:43358245:T:G	rs56682208	T	G	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	44329789	44329790	chr5:44329790:C:T	rs74355115	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	45454329	45454330	chr5:45454330:G:A	rs2878967	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.466705306321288	7.007143308012243	CCCAATTAGC
chr5	45454344	45454345	chr5:45454345:G:T	chr5:45454345:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	50449497	50449498	chr5:50449498:G:A	rs34433187	G	A	g	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	50820621	50820622	chr5:50820622:T:C	rs965913	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr5	51802806	51802807	chr5:51802807:A:T	rs7725682	A	T	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.700736798541729	4.572982905826323	GGCAATTAGT
chr5	52402297	52402298	chr5:52402298:C:T	rs2961728	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.300090444404122	7.368206265395549	GGTAATTAAT
chr5	52891969	52891970	chr5:52891970:C:T	rs7731598	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr5	52938492	52938493	chr5:52938493:C:T	rs1871184	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	53007455	53007456	chr5:53007456:G:A	rs62357227	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	53032501	53032502	chr5:53032502:A:C	rs186686495	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	53365176	53365177	chr5:53365177:T:C	rs66788870	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	53820292	53820293	chr5:53820293:G:A	rs17248377	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr5	53820322	53820323	chr5:53820323:T:C	rs17248426	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	54063864	54063865	chr5:54063865:G:A	rs73112667	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr5	54653668	54653669	chr5:54653669:G:A	rs62354644	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	54969777	54969778	chr5:54969778:G:C	rs1023675	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	55303231	55303232	chr5:55303232:C:T	chr5:55303232:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	55634488	55634489	chr5:55634489:A:T	chr5:55634489:A:T	A	T	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	55634500	55634501	chr5:55634501:T:C	rs28479744	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	56734437	56734438	chr5:56734438:G:A	rs115400067	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr5	57003384	57003385	chr5:57003385:A:G	rs4700653	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	57003392	57003393	chr5:57003393:G:A	rs76016530	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	57494298	57494299	chr5:57494299:C:T	rs73757399	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.30929062122411	6.64156985452071	AGTAATTAGT
chr5	57754978	57754979	chr5:57754979:G:A	rs1558575	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr5	57784341	57784342	chr5:57784342:T:C	rs1861059	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr5	57851848	57851849	chr5:57851849:G:A	rs1816392	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	58759147	58759148	chr5:58759148:G:T	rs292952	G	T	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	58853598	58853599	chr5:58853599:T:C	rs295674	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	59080166	59080167	chr5:59080167:T:C	rs7719347	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	59103373	59103374	chr5:59103374:A:G	rs6865647	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr5	59540516	59540517	chr5:59540517:T:A	rs16889948	T	A	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	61330667	61330668	chr5:61330668:A:G	chr5:61330668:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	61330678	61330679	chr5:61330679:C:G	rs112045457	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	61330684	61330685	chr5:61330685:G:A	rs995979449	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.433117506410662	7.501233327402089	GGTAATTAAG
chr5	61497995	61497996	chr5:61497996:G:A	rs77894051	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	61631365	61631366	chr5:61631366:A:G	rs16893130	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.741948279795344	3.881851836234596	ACCAATTAGG
chr5	61861172	61861173	chr5:61861173:C:T	rs114325308	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	62364478	62364479	chr5:62364479:G:T	rs74288901	G	T	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	64635203	64635204	chr5:64635204:T:C	rs186829641	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	64884159	64884160	chr5:64884160:A:G	rs6898106	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	65708378	65708379	chr5:65708379:T:A	rs17241952	T	A	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	66230676	66230677	chr5:66230677:A:G	rs253224	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.273186104666311	5.284328202753129	GCTAATTAAG
chr5	66344811	66344812	chr5:66344812:A:G	rs10471322	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	66564399	66564400	chr5:66564400:C:T	rs13183635	C	T	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	66872020	66872021	chr5:66872021:A:G	rs193054529	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	67205011	67205012	chr5:67205012:A:T	rs1428471	A	T	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr5	67205013	67205014	chr5:67205014:A:C	rs1428472	A	C	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr5	67234883	67234884	chr5:67234884:G:A	rs60305061	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	67427750	67427751	chr5:67427751:C:T	rs79396799	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	67514068	67514069	chr5:67514069:T:C	rs72765070	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.300090444404122	5.311232542490941	GGTAATTAAT
chr5	67623560	67623561	chr5:67623561:C:G	rs74381621	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	68331824	68331825	chr5:68331825:A:G	rs1394048870	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	68457790	68457791	chr5:68457791:C:T	rs1366196	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	68500235	68500236	chr5:68500236:C:G	rs7737201	C	G	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.741948279795344	3.3752912233853647	ACCAATTAGG
chr5	68500247	68500248	chr5:68500248:T:C	rs7719353	T	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	68535993	68535994	chr5:68535994:A:G	rs11749692	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	68730804	68730805	chr5:68730805:C:T	rs73116920	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	68850206	68850207	chr5:68850207:T:A	rs62356093	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	69217596	69217597	chr5:69217597:T:G	rs111322584	T	G	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	69521270	69521271	chr5:69521271:T:C	rs1228759699	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	6.901879681539695	2.7453202802030847	AGCAATTAGG
chr5	71945495	71945496	chr5:71945496:A:T	rs2610430	A	T	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	71954112	71954113	chr5:71954113:A:G	rs2662334	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	72107891	72107892	chr5:72107892:G:C	rs6894541	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	72166991	72166992	chr5:72166992:T:G	rs138115181	T	G	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	72167009	72167010	chr5:72167010:T:G	rs375954638	T	G	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	72494773	72494774	chr5:72494774:T:G	rs115206490	T	G	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	72494787	72494788	chr5:72494788:G:A	rs140197000	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr5	73182657	73182658	chr5:73182658:T:A	rs6891055	T	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	73285232	73285233	chr5:73285233:G:A	rs7719116	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	73389161	73389162	chr5:73389162:C:T	rs80288411	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	73496182	73496183	chr5:73496183:C:T	rs7708306	C	T	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	73496191	73496192	chr5:73496192:C:T	rs347244	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.450525492992999	6.990963494683954	GCCAATTACC
chr5	73894293	73894294	chr5:73894294:T:A	rs2973530	T	A	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	74202907	74202908	chr5:74202908:G:C	rs158818	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.007267207914503	6.847335806170153	TGTAATTAGC
chr5	74257954	74257955	chr5:74257955:C:T	chr5:74257955:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr5	74309183	74309184	chr5:74309184:A:C	rs11747543	A	C	C	Hoxd3.mouse_homeodomain_1	3	1	+	7.44231768323065	6.34543499091885	AGTAATTAGG
chr5	74766440	74766441	chr5:74766441:G:C	rs17738266	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr5	74766532	74766533	chr5:74766533:G:T	rs17647023	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	76175667	76175668	chr5:76175668:A:G	rs1553324	A	G	.	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	76231096	76231097	chr5:76231097:G:A	rs11750299	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	76304325	76304326	chr5:76304326:A:G	rs246812	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	76395194	76395195	chr5:76395195:A:G	rs57929471	A	G	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	76704151	76704152	chr5:76704152:T:C	rs3797451	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	76718264	76718265	chr5:76718265:A:T	rs2227752	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr5	77475173	77475174	chr5:77475174:A:G	rs450688	A	G	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr5	77635107	77635108	chr5:77635108:A:G	chr5:77635108:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	77703412	77703413	chr5:77703413:A:G	rs352557	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	77704248	77704249	chr5:77704249:C:A	rs13174129	C	A	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr5	77848241	77848242	chr5:77848242:A:G	rs6881736	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	78050843	78050844	chr5:78050844:T:C	rs252799	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	78399215	78399216	chr5:78399216:A:G	rs10452490	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr5	78591235	78591236	chr5:78591236:A:G	rs111229155	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.277319169927424	3.444368218757722	GGTCATTAGG
chr5	78591245	78591246	chr5:78591246:G:A	rs146723665	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	78639500	78639501	chr5:78639501:G:A	rs550376635	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	78977724	78977725	chr5:78977725:C:A	rs4470743	C	A	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	79564715	79564716	chr5:79564716:G:T	rs17834610	G	T	T	Hoxd3.mouse_homeodomain_1	2	1	-	7.0639691987030195	5.260935257739247	AGCAATTAGC
chr5	79698538	79698539	chr5:79698539:C:T	rs9784710	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	79866549	79866550	chr5:79866550:C:T	rs264997	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	79975526	79975527	chr5:79975527:T:C	rs13354864	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	80106930	80106931	chr5:80106931:G:A	rs144206543	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr5	80138663	80138664	chr5:80138664:A:C	rs6891705	A	C	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	80178494	80178495	chr5:80178495:T:C	rs11951586	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr5	80179013	80179014	chr5:80179014:G:A	rs4704620	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	81757625	81757626	chr5:81757626:C:A	rs1550802	C	A	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	82275215	82275216	chr5:82275216:T:C	rs76062650	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	82419867	82419868	chr5:82419868:G:A	rs16899575	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	83946322	83946323	chr5:83946323:G:A	rs4612038	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	84253981	84253982	chr5:84253982:T:C	rs16901006	T	C	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	84574444	84574445	chr5:84574445:T:C	rs13359765	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	84721040	84721041	chr5:84721041:C:G	rs13360928	C	G	t	Hoxd3.mouse_homeodomain_1	0	1	+	6.6266367080656385	6.995853377711593	CGCAATTAGC
chr5	84724903	84724904	chr5:84724904:C:T	rs76574793	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.540805396797378	6.608921217788804	GCCAATTAGT
chr5	88671914	88671915	chr5:88671915:C:T	rs115680316	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	88833642	88833643	chr5:88833643:A:T	rs574879532	A	T	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr5	89256018	89256019	chr5:89256019:A:G	rs13355558	A	G	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	90802908	90802909	chr5:90802909:C:G	rs376450621	C	G	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	91384051	91384052	chr5:91384052:C:T	rs147153541	C	T	c	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr5	92380631	92380632	chr5:92380632:T:G	rs73133082	T	G	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.663322844565413	3.8228236680133456	AGTAATTAAC
chr5	92422034	92422035	chr5:92422035:C:T	rs6885976	C	T	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	92518332	92518333	chr5:92518333:G:A	rs148132246	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr5	92640934	92640935	chr5:92640935:T:C	rs78266284	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.894837620138681	4.905979718225498	GCCAATTAAC
chr5	93612108	93612109	chr5:93612109:A:C	chr5:93612109:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr5	95664281	95664282	chr5:95664282:G:A	rs77890572	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	95664283	95664284	chr5:95664284:T:G	rs144528701	T	G	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	95719320	95719321	chr5:95719321:A:G	rs6892832	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	96562414	96562415	chr5:96562415:C:A	rs155216	C	A	A	Hoxd3.mouse_homeodomain_1	1	1	-	7.007267207914503	6.323196384600341	TGTAATTAGC
chr5	96601862	96601863	chr5:96601863:G:A	chr5:96601863:G:A	G	A	.	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	96601862	96601863	chr5:96601863:G:C	rs4869295	G	C	.	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	96601878	96601879	chr5:96601879:C:T	chr5:96601879:C:T	C	T	.	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	96637129	96637130	chr5:96637130:G:A	rs17086446	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.288435975829675	5.903536294068065	GCCAATTACG
chr5	96895873	96895874	chr5:96895874:A:C	rs17407513	A	C	A	Hoxd3.mouse_homeodomain_1	5	1	-	7.066058952183682	4.066672992221218	CCTAATTAAC
chr5	96962789	96962790	chr5:96962790:G:A	rs79128738	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	97183706	97183707	chr5:97183707:T:C	rs968250310	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr5	97183710	97183711	chr5:97183711:A:C	rs1242442881	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.464547190902314	5.148939454431472	CGCAATTAGG
chr5	97547990	97547991	chr5:97547991:G:A	rs12153708	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	97576664	97576665	chr5:97576665:G:T	rs12655664	G	T	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr5	97684672	97684673	chr5:97684673:G:A	rs189385930	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	97684674	97684675	chr5:97684675:A:G	rs2914924	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	97932267	97932268	chr5:97932268:G:A	rs73776243	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	100593176	100593177	chr5:100593177:G:A	rs184888	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	101267366	101267367	chr5:101267367:G:T	rs116281946	G	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	101436589	101436590	chr5:101436590:G:A	rs348434	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	102271987	102271988	chr5:102271988:G:A	rs17148608	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr5	102324807	102324808	chr5:102324808:A:C	chr5:102324808:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr5	103356771	103356772	chr5:103356772:A:G	rs438233	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.663322844565413	4.803226401004666	AGTAATTAAC
chr5	103800982	103800983	chr5:103800983:A:G	rs75963924	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.433117506410662	6.892679504719707	GGTAATTAAG
chr5	103840653	103840654	chr5:103840654:C:T	rs10515362	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.962953441130107	6.667836861960243	ACCAATTAAC
chr5	105413126	105413127	chr5:105413127:G:T	rs56120870	G	T	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr5	105632606	105632607	chr5:105632607:C:G	rs10070359	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	105962413	105962414	chr5:105962414:G:T	rs6895239	G	T	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.167074709756593	7.604407200393974	CGTAATTAGC
chr5	107478388	107478389	chr5:107478389:T:C	rs27750	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr5	107565074	107565075	chr5:107565075:G:A	rs73198650	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	107705648	107705649	chr5:107705649:T:A	rs6891467	T	A	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr5	107821053	107821054	chr5:107821054:A:G	rs12522889	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	107949374	107949375	chr5:107949375:A:G	rs1433057	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	107957329	107957330	chr5:107957330:T:C	rs12054721	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	107964953	107964954	chr5:107964954:T:C	rs885624	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	108028567	108028568	chr5:108028568:C:T	rs288160	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	109106850	109106851	chr5:109106851:C:A	rs10056059	C	A	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	109519549	109519550	chr5:109519550:C:T	rs17161889	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	109585189	109585190	chr5:109585190:T:G	rs185465533	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	109694166	109694167	chr5:109694167:C:T	rs77409455	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr5	109696815	109696816	chr5:109696816:G:C	rs929749	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	109961252	109961253	chr5:109961253:T:C	rs62377067	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	110053561	110053562	chr5:110053562:C:G	rs17162608	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	110160342	110160343	chr5:110160343:T:G	rs6594433	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr5	110206712	110206713	chr5:110206713:G:A	rs4530808	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	110256402	110256403	chr5:110256403:T:C	rs894429700	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr5	110341763	110341764	chr5:110341764:A:C	rs11952631	A	C	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr5	110342865	110342866	chr5:110342866:C:T	rs141528681	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.595207023573987	7.663322844565413	GGTAATTAAC
chr5	111093045	111093046	chr5:111093046:G:A	rs7729832	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr5	111093049	111093050	chr5:111093050:G:T	chr5:111093050:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	111093082	111093083	chr5:111093083:T:C	rs7712015	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	112159452	112159453	chr5:112159453:A:G	rs7730334	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.894837620138681	4.034741176577933	GCCAATTAAC
chr5	112333382	112333383	chr5:112333383:C:G	rs990165741	C	G	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr5	112615900	112615901	chr5:112615901:C:A	rs4705700	C	A	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	112628285	112628286	chr5:112628286:G:A	rs12514228	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr5	113099922	113099923	chr5:113099923:T:G	rs6882155	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	113295086	113295087	chr5:113295087:A:G	rs945394614	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	113330691	113330692	chr5:113330692:A:T	chr5:113330692:A:T	A	T	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr5	113660528	113660529	chr5:113660529:A:T	rs7707681	A	T	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	113679392	113679393	chr5:113679393:G:A	rs114793209	G	A	g	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	114519699	114519700	chr5:114519700:A:C	rs680075	A	C	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr5	114702486	114702487	chr5:114702487:C:T	rs1277306532	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	117088802	117088803	chr5:117088803:A:G	rs10478326	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	118042943	118042944	chr5:118042944:A:G	rs72771498	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	118620658	118620659	chr5:118620659:A:G	rs41526950	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.741948279795344	4.753090377882162	ACCAATTAGG
chr5	118678860	118678861	chr5:118678861:C:T	rs35097285	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	+	6.962953441130107	6.667836861960243	ACCAATTAAC
chr5	118905287	118905288	chr5:118905288:G:A	rs17144807	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr5	119526017	119526018	chr5:119526018:A:G	rs11205	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.892679504719707	4.0325830611589595	GGCAATTAAG
chr5	119919289	119919290	chr5:119919290:C:T	rs74804854	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	120289710	120289711	chr5:120289711:T:A	rs4431373	T	A	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	120618814	120618815	chr5:120618815:C:G	rs13173880	C	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.466705306321288	6.835921975967242	CCCAATTAGC
chr5	120672084	120672085	chr5:120672085:C:A	rs2011072	C	A	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.007267207914503	6.272097175240331	TGTAATTAGC
chr5	120851766	120851767	chr5:120851767:G:C	rs60221676	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.904037796958669	6.518641313984426	ACCAATTAGC
chr5	121901099	121901100	chr5:121901100:G:T	rs6889079	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	123112109	123112110	chr5:123112110:C:T	rs173030	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	123115128	123115129	chr5:123115129:G:A	rs335182	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr5	123142418	123142419	chr5:123142419:A:G	rs461226	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.503391442821062	5.51453354090788	ACTAATTAAC
chr5	123178893	123178894	chr5:123178894:C:T	rs163186	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	123262447	123262448	chr5:123262448:C:T	rs35824	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	123671314	123671315	chr5:123671315:C:T	rs6898183	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	123672972	123672973	chr5:123672973:G:T	rs6595470	G	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr5	123673007	123673008	chr5:123673008:T:A	rs7725595	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	123673355	123673356	chr5:123673356:A:G	rs114855076	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr5	123752955	123752956	chr5:123752956:T:C	rs3849049	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	123836127	123836128	chr5:123836128:G:T	rs72799720	G	T	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.995853377711593	6.260683345037421	GGCAATTAGC
chr5	123844886	123844887	chr5:123844887:G:T	rs12515740	G	T	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	124127164	124127165	chr5:124127165:C:A	rs1004891	C	A	A	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	124128111	124128112	chr5:124128112:A:G	rs11950574	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	124398747	124398748	chr5:124398748:T:C	rs895298	T	C	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.374201862239223	6.8337638605482685	GGTAATTAGG
chr5	124842236	124842237	chr5:124842237:A:G	rs75878378	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	125133649	125133650	chr5:125133650:T:A	rs56171860	T	A	t	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr5	125141025	125141026	chr5:125141026:C:T	rs142881320	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	125187092	125187093	chr5:125187093:A:G	chr5:125187093:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	125970886	125970887	chr5:125970887:G:A	rs72795068	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr5	126138711	126138712	chr5:126138712:C:A	rs3843818	C	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.501233327402089	7.368206265395549	AGTAATTAAG
chr5	126423280	126423281	chr5:126423281:C:T	chr5:126423281:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	126758652	126758653	chr5:126758653:G:A	rs73333419	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	127233467	127233468	chr5:127233468:G:A	rs2898039	G	A	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	127432249	127432250	chr5:127432250:G:A	rs79511146	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	127432268	127432269	chr5:127432269:A:G	rs6866678	A	G	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.962953441130107	6.904037796958669	ACCAATTAAC
chr5	127704919	127704920	chr5:127704920:C:A	rs1067705	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	127871653	127871654	chr5:127871654:T:A	rs146827272	T	A	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	128272439	128272440	chr5:128272440:A:G	rs75856965	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	128967332	128967333	chr5:128967333:G:A	rs2577546	G	A	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	128991189	128991190	chr5:128991190:A:G	rs6877556	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.741948279795344	-0.09860894462331571	ACCAATTAGG
chr5	129223342	129223343	chr5:129223343:A:G	rs6889285	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr5	130021975	130021976	chr5:130021976:C:G	rs17162920	C	G	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.503391442821062	7.663322844565413	ACTAATTAAC
chr5	131258005	131258006	chr5:131258006:T:G	rs144294599	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr5	131258029	131258030	chr5:131258030:G:C	rs7356708	G	C	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	132211912	132211913	chr5:132211913:C:A	rs557163216	C	A	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr5	132672951	132672952	chr5:132672952:T:G	rs2243248	T	G	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr5	132674017	132674018	chr5:132674018:C:T	rs2070874	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	6.700736798541729	6.0330160318383275	GGCAATTAGT
chr5	133383665	133383666	chr5:133383666:A:C	rs62374566	A	C	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	133523074	133523075	chr5:133523075:G:A	rs185590	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr5	133878390	133878391	chr5:133878391:A:G	rs2098643	A	G	G	Hoxd3.mouse_homeodomain_1	7	1	+	7.30929062122411	3.1527312198875004	AGTAATTAGT
chr5	135205621	135205622	chr5:135205622:G:A	rs6891791	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	135301591	135301592	chr5:135301592:A:G	rs185900188	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	135329229	135329230	chr5:135329230:G:A	rs987112647	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr5	135329273	135329274	chr5:135329274:C:G	rs60651889	C	G	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	135400167	135400168	chr5:135400168:G:A	rs2617260	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.989302180477614	6.321581413774212	GGTAATTAGA
chr5	135536166	135536167	chr5:135536167:C:T	rs145500479	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.9888053792649805	7.056921200256407	GGTAATTACG
chr5	135538349	135538350	chr5:135538350:T:A	rs12518451	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.901879681539695	4.081293287754421	AGCAATTAGG
chr5	135634393	135634394	chr5:135634394:T:C	rs31261	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr5	135691181	135691182	chr5:135691182:C:G	rs12516549	C	G	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	135718155	135718156	chr5:135718156:T:C	rs6860750	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr5	135837248	135837249	chr5:135837249:C:T	rs6885670	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	137105828	137105829	chr5:137105829:T:G	rs140294374	T	G	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	137260894	137260895	chr5:137260895:G:A	rs2916636	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr5	137743276	137743277	chr5:137743277:T:C	chr5:137743277:T:C	T	C	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	138242159	138242160	chr5:138242160:T:C	rs551381201	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr5	138576117	138576118	chr5:138576118:C:T	rs41294442	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	138648505	138648506	chr5:138648506:A:G	rs17171925	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	139116535	139116536	chr5:139116536:C:G	rs13188935	C	G	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	139711124	139711125	chr5:139711125:A:G	rs1158299502	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	140245048	140245049	chr5:140245049:C:T	rs140708028	C	T	c	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	140964012	140964013	chr5:140964013:A:G	rs155811	A	G	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	141142843	141142844	chr5:141142844:G:A	rs246718	G	A	-	Hoxd3.mouse_homeodomain_1	2	1	-	6.8337638605482685	7.374201862239223	GGCAATTAGG
chr5	141484106	141484107	chr5:141484107:A:C	rs13361997	A	C	g	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr5	141508936	141508937	chr5:141508937:G:T	rs764041162	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.066058952183682	7.503391442821062	CCTAATTAAC
chr5	141585899	141585900	chr5:141585900:A:T	rs12717895	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	141585911	141585912	chr5:141585912:G:A	rs72792314	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	141715572	141715573	chr5:141715573:G:T	chr5:141715573:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	141715597	141715598	chr5:141715598:G:A	rs116202922	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr5	141997651	141997652	chr5:141997652:T:C	rs390572	T	C	C	Hoxd3.mouse_homeodomain_1	6	1	+	6.439408687090748	3.606457735921047	GGTCATTAGC
chr5	141997671	141997672	chr5:141997672:A:G	rs404510	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr5	142124273	142124274	chr5:142124274:A:G	rs6877864	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr5	142124304	142124305	chr5:142124305:T:A	rs6882226	T	A	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	142364946	142364947	chr5:142364947:G:A	rs10061008	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	142768180	142768181	chr5:142768181:T:C	rs11743319	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.279477285346397	3.4193808417856495	GCTCATTAGC
chr5	143007537	143007538	chr5:143007538:G:A	rs4912888	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	143230416	143230417	chr5:143230417:G:A	rs12717903	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr5	143399960	143399961	chr5:143399961:C:T	rs10482622	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.433117506410662	7.048217824649052	GGTAATTAAG
chr5	143752887	143752888	chr5:143752888:A:C	rs72808767	A	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	143752888	143752889	chr5:143752889:G:C	rs17100783	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	144188140	144188141	chr5:144188141:T:C	rs144604487	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	144310757	144310758	chr5:144310758:A:G	rs17101768	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr5	144321420	144321421	chr5:144321421:T:G	rs10515539	T	G	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr5	144511286	144511287	chr5:144511287:T:C	rs17102012	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr5	144598446	144598447	chr5:144598447:T:C	rs17702948	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	144598458	144598459	chr5:144598459:A:G	rs553569709	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	145158526	145158527	chr5:145158527:A:G	rs77236022	A	G	a	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr5	145636554	145636555	chr5:145636555:T:C	rs2195938	T	C	g	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr5	145737853	145737854	chr5:145737854:C:T	rs1027290379	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	145773620	145773621	chr5:145773621:T:C	rs112512875	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	145829856	145829857	chr5:145829857:C:T	rs663205	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.300090444404122	7.368206265395549	GGTAATTAAT
chr5	146026473	146026474	chr5:146026474:G:C	rs248774	G	C	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.894837620138681	6.732748102975356	GCCAATTAAC
chr5	146026489	146026490	chr5:146026490:C:A	rs248773	C	A	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	146182948	146182949	chr5:146182949:A:G	rs901663523	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr5	146742759	146742760	chr5:146742760:G:A	rs4705441	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	146790259	146790260	chr5:146790260:G:A	rs145640738	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr5	146901961	146901962	chr5:146901962:T:C	rs567116	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	147055236	147055237	chr5:147055237:C:T	rs1383169	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr5	147337040	147337041	chr5:147337041:C:T	rs62377743	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	147446478	147446479	chr5:147446479:G:C	rs142388672	G	C	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	147752185	147752186	chr5:147752186:G:A	rs17498180	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	148259665	148259666	chr5:148259666:G:A	rs4705243	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.8337638605482685	7.374201862239223	GGCAATTAGG
chr5	148696379	148696380	chr5:148696380:G:T	rs73795119	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	148922081	148922082	chr5:148922082:A:G	rs1974657	A	G	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	148922094	148922095	chr5:148922095:T:C	rs1974656	T	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	149243534	149243535	chr5:149243535:A:G	rs10067047	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr5	149311548	149311549	chr5:149311549:T:C	rs1659114	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.741948279795344	-0.09860894462331571	ACCAATTAGG
chr5	149341987	149341988	chr5:149341988:C:G	rs352350	C	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	149342005	149342006	chr5:149342006:T:G	chr5:149342006:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.300090444404122	3.3929953863031885	GGTAATTAAT
chr5	149761193	149761194	chr5:149761194:A:G	rs7735347	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	149821039	149821040	chr5:149821040:T:C	rs32587	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	149874633	149874634	chr5:149874634:C:T	rs78786472	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr5	150050234	150050235	chr5:150050235:C:G	rs141993103	C	G	c	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	150106077	150106078	chr5:150106078:C:T	rs751950731	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	150129706	150129707	chr5:150129707:A:G	rs1864972	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	150320570	150320571	chr5:150320571:G:A	rs142894813	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	151029149	151029150	chr5:151029150:C:T	rs3763010	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	151149366	151149367	chr5:151149367:A:G	rs35414841	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr5	151217445	151217446	chr5:151217446:C:T	rs57978529	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	151601697	151601698	chr5:151601698:T:C	rs753458	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	152688368	152688369	chr5:152688369:G:A	rs2964252	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr5	153086729	153086730	chr5:153086730:T:C	rs11744443	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	153168599	153168600	chr5:153168600:G:C	rs2910036	G	C	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.892679504719707	7.054769021883032	GGCAATTAAG
chr5	153308617	153308618	chr5:153308618:T:A	rs308271	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr5	153341424	153341425	chr5:153341425:G:A	rs17583883	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr5	153353569	153353570	chr5:153353570:C:A	rs72799261	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	153658455	153658456	chr5:153658456:G:A	rs2963942	G	A	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	154260485	154260486	chr5:154260486:A:G	rs2434529	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr5	154262484	154262485	chr5:154262485:T:G	rs2443522	T	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	154473535	154473536	chr5:154473536:A:G	rs10075231	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	154523907	154523908	chr5:154523908:C:T	rs541260042	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr5	154618555	154618556	chr5:154618556:C:T	rs62380476	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr5	154618561	154618562	chr5:154618562:G:A	rs11167691	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr5	154819498	154819499	chr5:154819499:A:G	rs77412577	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	154829646	154829647	chr5:154829647:A:G	rs2560040	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	155004467	155004468	chr5:155004468:T:C	rs77656625	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	155190003	155190004	chr5:155190004:C:G	rs76207230	C	G	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	155685820	155685821	chr5:155685821:C:T	rs55964788	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	156574537	156574538	chr5:156574538:C:T	rs17640369	C	T	c	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	157050819	157050820	chr5:157050820:G:A	rs17573010	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	157821680	157821681	chr5:157821681:T:C	rs1145588	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	157919174	157919175	chr5:157919175:G:A	rs542265156	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	157931542	157931543	chr5:157931543:T:G	rs3096001	T	G	G	Hoxd3.mouse_homeodomain_1	5	1	+	6.901879681539695	3.90249372157723	AGCAATTAGG
chr5	158203114	158203115	chr5:158203115:C:T	rs202805	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	6.6266367080656385	5.958915941362238	CGCAATTAGC
chr5	158277135	158277136	chr5:158277136:C:A	rs1145606	C	A	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	158319835	158319836	chr5:158319836:C:T	rs4704924	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.44231768323065	7.05741800146904	AGTAATTAGG
chr5	158319843	158319844	chr5:158319844:C:T	rs4704771	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.44231768323065	6.7745969165272495	AGTAATTAGG
chr5	158869551	158869552	chr5:158869552:T:C	rs79886811	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	158983506	158983507	chr5:158983507:C:T	rs13189454	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.341301925657738	6.817162504087927	ACTAATTAAG
chr5	159452524	159452525	chr5:159452525:G:A	rs111849868	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	159947846	159947847	chr5:159947847:G:A	rs55835877	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	160128199	160128200	chr5:160128200:G:A	rs2431738	G	A	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	160240572	160240573	chr5:160240573:G:A	rs1469075	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	160240605	160240606	chr5:160240606:C:T	rs3926393	C	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr5	160287520	160287521	chr5:160287521:T:C	rs2303059	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	160420072	160420073	chr5:160420073:G:A	rs2910199	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr5	160442449	160442450	chr5:160442450:T:C	rs2910207	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr5	160469082	160469083	chr5:160469083:T:G	rs13163395	T	G	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	160619490	160619491	chr5:160619491:A:G	rs1421963	A	G	a	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	160698817	160698818	chr5:160698818:G:A	rs1432785	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	160698853	160698854	chr5:160698854:G:A	rs34447288	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	160843351	160843352	chr5:160843352:C:T	rs73305852	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.892679504719707	6.224958738016306	GGCAATTAAG
chr5	160958365	160958366	chr5:160958366:A:G	rs66516845	A	G	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	162013937	162013938	chr5:162013938:G:A	rs111424366	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	162961981	162961982	chr5:162961982:G:C	rs2926052	G	C	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	163106021	163106022	chr5:163106022:T:A	rs4604210	T	A	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr5	163415648	163415649	chr5:163415649:A:G	rs115702755	A	G	a	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr5	163759371	163759372	chr5:163759372:T:C	rs2635177	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr5	164090589	164090590	chr5:164090590:A:G	rs10463141	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	164190435	164190436	chr5:164190436:G:A	rs988498	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	165135428	165135429	chr5:165135429:C:T	rs76004195	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.525620950492726	6.365813448650636	CCCAATTAAC
chr5	165137388	165137389	chr5:165137389:A:G	rs7444721	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	7.30929062122411	5.320432719310928	AGTAATTAGT
chr5	165191569	165191570	chr5:165191570:A:G	rs13175931	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr5	165636442	165636443	chr5:165636443:T:C	rs190394767	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	166123684	166123685	chr5:166123685:A:T	rs73800685	A	T	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.241174800232684	6.989302180477614	GGTAATTAGT
chr5	166238518	166238519	chr5:166238519:T:C	rs2695975	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.904037796958669	4.043941353397921	ACCAATTAGC
chr5	166423941	166423942	chr5:166423942:T:C	rs62383372	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	166782139	166782140	chr5:166782140:A:C	rs74815225	A	C	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	166782174	166782175	chr5:166782175:G:T	rs56093615	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr5	167041856	167041857	chr5:167041857:C:G	rs34923989	C	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	167041858	167041859	chr5:167041859:C:G	rs1393151	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	167332724	167332725	chr5:167332725:G:A	rs141922451	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.214270460494872	6.6901310389250614	GCTAATTAGG
chr5	168039061	168039062	chr5:168039062:T:C	rs73803854	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr5	168165780	168165781	chr5:168165781:G:C	rs201170608	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	168251726	168251727	chr5:168251727:A:G	rs147576713	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr5	168364447	168364448	chr5:168364448:C:T	rs11960586	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	168367123	168367124	chr5:168367124:A:G	rs17632921	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	168481585	168481586	chr5:168481586:G:A	rs55851504	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr5	168713716	168713717	chr5:168713717:G:A	rs17070417	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	168756697	168756698	chr5:168756698:T:C	rs6884130	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr5	168789955	168789956	chr5:168789956:C:T	rs891926	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	168820559	168820560	chr5:168820560:C:G	rs924873	C	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	168878290	168878291	chr5:168878291:G:A	rs77339025	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	168881646	168881647	chr5:168881647:T:C	rs1875975	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr5	168953567	168953568	chr5:168953568:T:C	rs10066495	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	169303704	169303705	chr5:169303705:C:G	rs1422029	C	G	G	Hoxd3.mouse_homeodomain_1	2	1	+	6.678572715728777	3.3119156593187977	AGCAATTACC
chr5	169335618	169335619	chr5:169335619:A:T	rs570953078	A	T	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr5	169543500	169543501	chr5:169543501:A:C	rs255827	A	C	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	169698058	169698059	chr5:169698059:A:G	rs72841143	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr5	169703680	169703681	chr5:169703681:T:C	rs17736834	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	169754453	169754454	chr5:169754454:A:G	rs262859	A	G	g	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	170008708	170008709	chr5:170008709:A:C	rs2287727	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.835921975967242	5.5203142394964	GCCAATTAGC
chr5	170216658	170216659	chr5:170216659:T:C	rs13160927	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	170308319	170308320	chr5:170308320:T:C	rs17739586	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	170342864	170342865	chr5:170342865:T:C	rs7713802	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	170342866	170342867	chr5:170342867:T:A	rs7713803	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	170717478	170717479	chr5:170717479:C:T	rs13175202	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	170760170	170760171	chr5:170760171:C:A	rs9313523	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	170760170	170760171	chr5:170760171:C:T	chr5:170760171:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	171408495	171408496	chr5:171408496:T:A	rs77472254	T	A	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr5	171462737	171462738	chr5:171462738:G:A	rs182561038	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	171469394	171469395	chr5:171469395:T:C	rs34707747	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr5	171808009	171808010	chr5:171808010:C:T	rs1529703	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr5	171837042	171837043	chr5:171837043:T:C	rs2160418	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr5	171857387	171857388	chr5:171857388:G:A	rs73328077	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	172426153	172426154	chr5:172426154:G:A	rs6866204	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr5	172503893	172503894	chr5:172503894:T:C	rs55693205	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	172557909	172557910	chr5:172557910:A:C	rs1433019	A	C	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr5	172559310	172559311	chr5:172559311:C:T	rs142962816	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr5	172641363	172641364	chr5:172641364:G:A	rs1446355658	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	172729003	172729004	chr5:172729004:G:A	rs322387	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr5	172926868	172926869	chr5:172926869:T:G	rs11748190	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr5	172929310	172929311	chr5:172929311:C:T	rs533371377	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	173093170	173093171	chr5:173093171:G:A	rs62385898	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	173693648	173693649	chr5:173693649:A:G	rs57406157	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr5	173817397	173817398	chr5:173817398:T:A	rs2546764	T	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.960795325711134	6.363655333231662	AGCAATTAAG
chr5	174093262	174093263	chr5:174093263:T:C	chr5:174093263:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.435275621829636	4.602324670659934	GCTAATTAAC
chr5	174150879	174150880	chr5:174150880:G:A	rs11956829	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	174248027	174248028	chr5:174248028:C:A	rs4868367	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr5	174986858	174986859	chr5:174986859:T:G	rs10045547	T	G	t	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	175341842	175341843	chr5:175341843:G:A	rs10069450	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	176817903	176817904	chr5:176817904:G:T	rs1396448	G	T	g	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr5	177930944	177930945	chr5:177930945:C:T	rs113821938	C	T	.	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	177930962	177930963	chr5:177930963:A:G	rs4958980	A	G	.	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	178532740	178532741	chr5:178532741:A:G	rs647505	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr5	178793796	178793797	chr5:178793797:G:A	rs60372900	G	A	g	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	179218053	179218054	chr5:179218054:T:C	rs467419	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	179427336	179427337	chr5:179427337:G:C	rs149691492	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.30929062122411	7.149359219479759	AGTAATTAGT
chr5	179623186	179623187	chr5:179623187:A:C	rs1136267	A	C	.	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	180606632	180606633	chr5:180606633:T:C	rs11955716	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr5	180606638	180606639	chr5:180606639:T:C	rs11955717	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr5	180693148	180693149	chr5:180693149:T:C	rs11738216	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	181170312	181170313	chr5:181170313:C:A	rs192245123	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	181273487	181273488	chr5:181273488:C:T	rs879379323	C	T	.	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	247603	247604	chr6:247604:G:A	rs139449352	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	247612	247613	chr6:247613:A:G	rs368977088	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	253271	253272	chr6:253272:G:A	rs12193595	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.063900836764708	6.904093334922617	CGTAATTAAG
chr6	257500	257501	chr6:257501:G:A	rs191706510	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	257511	257512	chr6:257512:G:T	rs115673084	G	T	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.214270460494872	6.6852462890068285	GCTAATTAGG
chr6	397289	397290	chr6:397290:T:C	rs1775589	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.0639691987030195	4.203872755142272	AGCAATTAGC
chr6	715473	715474	chr6:715474:T:C	rs140457894	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	1081198	1081199	chr6:1081199:G:A	rs76364787	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	1364837	1364838	chr6:1364838:T:G	rs78581380	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr6	1555593	1555594	chr6:1555594:G:C	rs59710915	G	C	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	1908927	1908928	chr6:1908928:A:C	chr6:1908928:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	1987920	1987921	chr6:1987921:A:G	rs115501561	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	2157652	2157653	chr6:2157653:G:A	rs9328083	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	2162409	2162410	chr6:2162410:C:A	rs3778561	C	A	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	2854132	2854133	chr6:2854133:G:A	rs412303	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	3438670	3438671	chr6:3438671:C:T	rs146543161	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr6	3568652	3568653	chr6:3568653:G:A	rs983589026	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	3823261	3823262	chr6:3823262:T:C	rs58472694	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	3823288	3823289	chr6:3823289:G:A	rs59442598	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr6	3919325	3919326	chr6:3919326:A:G	rs6906656	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.450525492992999	4.4616675910798165	GCCAATTACC
chr6	4361943	4361944	chr6:4361944:G:T	rs9504062	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	4394671	4394672	chr6:4394672:A:G	rs2326488	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	4679453	4679454	chr6:4679454:A:G	rs9378901	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	4992060	4992061	chr6:4992061:G:A	rs1246982	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	5107620	5107621	chr6:5107621:A:G	rs74851950	A	G	a	Hoxd3.mouse_homeodomain_1	4	1	+	6.304615789157963	3.444519345597216	CCCAATTAGG
chr6	5647853	5647854	chr6:5647854:A:G	rs10484314	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.007267207914503	2.8507078065778932	TGTAATTAGC
chr6	5896848	5896849	chr6:5896849:T:A	rs9504571	T	A	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	5907981	5907982	chr6:5907982:G:A	rs9502375	G	A	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	6316568	6316569	chr6:6316569:T:G	rs11243078	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	6637576	6637577	chr6:6637577:G:C	rs3804484	G	C	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	6748101	6748102	chr6:6748102:C:G	rs79943644	C	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr6	6748102	6748103	chr6:6748103:G:C	rs74406474	G	C	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr6	7167167	7167168	chr6:7167168:C:T	rs73374633	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr6	7446262	7446263	chr6:7446263:C:T	rs141765025	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	7447004	7447005	chr6:7447005:C:T	rs534485177	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	7667219	7667220	chr6:7667220:C:T	rs9378503	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	7978492	7978493	chr6:7978493:G:A	rs9502670	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	8100423	8100424	chr6:8100424:A:C	rs151157078	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr6	8151367	8151368	chr6:8151368:T:C	rs17143388	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	8207565	8207566	chr6:8207566:A:G	rs553900	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.678572715728777	6.61045689473735	AGCAATTACC
chr6	8321314	8321315	chr6:8321315:T:A	rs2652853	T	A	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	9125775	9125776	chr6:9125776:G:A	rs113062368	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	9745602	9745603	chr6:9745603:A:T	rs78471530	A	T	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	10014700	10014701	chr6:10014701:A:G	rs201246	A	G	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	10184456	10184457	chr6:10184457:T:G	rs6926746	T	G	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	10184490	10184491	chr6:10184491:T:C	rs6926769	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	10335436	10335437	chr6:10335437:C:A	rs3925274	C	A	a	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	10809360	10809361	chr6:10809361:G:A	rs9379796	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr6	11414942	11414943	chr6:11414943:C:T	rs7759515	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	5.898970685399792	5.957886329571231	GGCCATTAGC
chr6	11462985	11462986	chr6:11462986:C:T	rs16871366	C	T	c	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr6	11589316	11589317	chr6:11589317:G:A	rs645198	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	11596763	11596764	chr6:11596764:G:A	rs295062	G	A	g	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	11750285	11750286	chr6:11750286:G:A	rs2235410	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	11908643	11908644	chr6:11908644:A:C	chr6:11908644:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr6	12411059	12411060	chr6:12411060:G:A	rs12206153	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	12851535	12851536	chr6:12851536:C:T	rs6917097	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.063900836764708	6.396180070061307	CGTAATTAAG
chr6	12977618	12977619	chr6:12977619:G:A	rs36100854	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	13183337	13183338	chr6:13183338:G:T	rs4711932	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	13248655	13248656	chr6:13248656:A:G	rs139920586	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	13279634	13279635	chr6:13279635:T:A	rs405078	T	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	13463296	13463297	chr6:13463297:C:T	rs7774411	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.835921975967242	6.540805396797378	GCCAATTAGC
chr6	13854161	13854162	chr6:13854162:T:C	rs12662534	T	C	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.2190107174197315	6.678572715728777	AGTAATTACC
chr6	14521720	14521721	chr6:14521721:T:G	rs7772992	T	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	14638979	14638980	chr6:14638980:C:T	rs771201214	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr6	14665285	14665286	chr6:14665286:T:C	rs2092918	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	14717568	14717569	chr6:14717569:C:A	rs9476637	C	A	c	Hoxd3.mouse_homeodomain_1	9	1	-	6.8337638605482685	6.700736798541729	GGCAATTAGG
chr6	14717569	14717570	chr6:14717570:C:G	rs77846490	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.8337638605482685	6.448367377574026	GGCAATTAGG
chr6	14913736	14913737	chr6:14913737:C:T	rs6930513	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	15265667	15265668	chr6:15265668:G:T	rs75049360	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	15455162	15455163	chr6:15455163:T:C	rs9370814	T	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	15457006	15457007	chr6:15457007:C:T	rs80219334	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr6	15588889	15588890	chr6:15588890:A:G	rs760666	A	G	G	Hoxd3.mouse_homeodomain_1	6	1	-	7.663322844565413	4.830371893395712	AGTAATTAAC
chr6	15820193	15820194	chr6:15820194:C:T	rs522264	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	16217358	16217359	chr6:16217359:T:C	rs4418191	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr6	16243569	16243570	chr6:16243570:G:A	rs80308950	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	16875901	16875902	chr6:16875902:G:A	rs9477242	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	17354802	17354803	chr6:17354803:A:T	rs184908985	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.376359977658197	5.286862645827619	GCTAATTAGC
chr6	17706292	17706293	chr6:17706293:C:T	rs61746226	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	17816899	17816900	chr6:17816900:G:A	rs3734236	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	17860896	17860897	chr6:17860897:T:C	rs607690	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	18022868	18022869	chr6:18022869:T:C	rs12208058	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	18513209	18513210	chr6:18513210:G:C	rs959434	G	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	19220452	19220453	chr6:19220453:T:C	rs9465283	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.273186104666311	3.116626703329701	GCTAATTAAG
chr6	19330172	19330173	chr6:19330173:C:G	rs9465337	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr6	19612846	19612847	chr6:19612847:T:C	rs1936905	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	19691290	19691291	chr6:19691291:C:T	rs72657608	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	21401529	21401530	chr6:21401530:C:T	rs7742386	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	7.214270460494872	6.829370778733263	GCTAATTAGG
chr6	21915905	21915906	chr6:21915906:G:T	chr6:21915906:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	21929616	21929617	chr6:21929617:T:C	rs12201386	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	22544588	22544589	chr6:22544589:A:G	rs16886432	A	G	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.300090444404122	7.241174800232684	GGTAATTAAT
chr6	22631466	22631467	chr6:22631467:C:T	rs1883653	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	5.898970685399792	5.231249918696392	GGCCATTAGC
chr6	22665006	22665007	chr6:22665007:T:C	rs2223628	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	22892918	22892919	chr6:22892919:A:C	rs2498225	A	C	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr6	23277864	23277865	chr6:23277865:A:G	rs9348557	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr6	23654939	23654940	chr6:23654940:C:T	rs566071	C	T	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	23656325	23656326	chr6:23656326:A:C	rs9466886	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.995853377711593	4.54669790743674	GGCAATTAGC
chr6	23736361	23736362	chr6:23736362:T:A	rs2328788	T	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	7.122884842874458	6.328799166028848	AGCAATTAAC
chr6	24358254	24358255	chr6:24358255:G:C	rs1277349	G	C	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	24462938	24462939	chr6:24462939:T:C	rs2793443	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	24584137	24584138	chr6:24584138:A:G	rs2817200	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr6	24607921	24607922	chr6:24607922:T:C	rs16889513	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr6	24770494	24770495	chr6:24770495:G:T	rs118125535	G	T	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	24909296	24909297	chr6:24909297:T:C	rs114602564	T	C	t	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	24909298	24909299	chr6:24909299:A:T	rs35374042	A	T	a	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	24941219	24941220	chr6:24941220:G:A	rs35398163	G	A	a	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	24982515	24982516	chr6:24982516:A:G	rs972486179	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	25166480	25166481	chr6:25166481:A:T	rs190832184	A	T	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	25229221	25229222	chr6:25229222:A:C	rs4712901	A	C	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr6	25311325	25311326	chr6:25311326:G:A	rs77169911	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	25614366	25614367	chr6:25614367:C:G	rs1569483	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	25899436	25899437	chr6:25899437:G:T	rs376546	G	T	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr6	26056996	26056997	chr6:26056997:G:T	rs527352754	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	26106008	26106009	chr6:26106009:G:T	rs707891	G	T	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr6	26157732	26157733	chr6:26157733:A:G	rs183166420	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr6	26183575	26183576	chr6:26183576:A:C	rs1359129464	A	C	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	26183587	26183588	chr6:26183588:G:A	rs17533076	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.066058952183682	6.54191953061387	CCTAATTAAC
chr6	26212250	26212251	chr6:26212251:C:G	rs6919303	C	G	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	27020567	27020568	chr6:27020568:C:G	rs9467964	C	G	.	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	27020595	27020596	chr6:27020596:G:A	rs73737997	G	A	.	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	27066498	27066499	chr6:27066499:G:A	rs76371153	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	27097071	27097072	chr6:27097072:G:A	rs9467990	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	27097100	27097101	chr6:27097101:T:C	rs73739549	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	27375340	27375341	chr6:27375341:T:G	rs143152703	T	G	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	27687190	27687191	chr6:27687191:C:A	rs72845064	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	28488941	28488942	chr6:28488942:T:C	rs2531820	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr6	29072001	29072002	chr6:29072002:T:G	rs62407619	T	G	t	Hoxd3.mouse_homeodomain_1	7	1	-	7.007267207914503	3.1667680313624356	TGTAATTAGC
chr6	29513215	29513216	chr6:29513216:T:C	rs3094572	T	C	C	Hoxd3.mouse_homeodomain_1	7	1	-	7.273186104666311	3.116626703329701	GCTAATTAAG
chr6	29750387	29750388	chr6:29750388:T:C	rs2517934	T	C	t	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr6	29815527	29815528	chr6:29815528:C:A	rs1633108	C	A	-	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	29967627	29967628	chr6:29967628:C:T	rs3893463	C	T	-	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	30029834	30029835	chr6:30029835:G:C	rs375689497	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	30074279	30074280	chr6:30074280:G:A	rs11965540	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.282386281486299	6.897486599724689	ACTAATTAGG
chr6	30112914	30112915	chr6:30112915:A:T	rs371270777	A	T	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	30326420	30326421	chr6:30326421:A:C	rs114052920	A	C	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr6	30541686	30541687	chr6:30541687:T:G	chr6:30541687:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	30618253	30618254	chr6:30618254:G:A	rs3873304	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.341301925657738	6.956402243896128	ACTAATTAAG
chr6	30779355	30779356	chr6:30779356:G:C	rs28894082	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr6	30820573	30820574	chr6:30820574:T:A	rs12192205	T	A	T	Hoxd3.mouse_homeodomain_1	6	1	+	7.066058952183682	4.245472558398408	CCTAATTAAC
chr6	30855982	30855983	chr6:30855983:T:C	rs2844660	T	C	T	Hoxd3.mouse_homeodomain_1	6	1	+	6.277319169927424	3.444368218757722	GGTCATTAGG
chr6	31007720	31007721	chr6:31007721:G:A	rs41291746	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	31012132	31012133	chr6:31012133:T:C	rs9262461	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.894837620138681	4.034741176577933	GCCAATTAAC
chr6	31012155	31012156	chr6:31012156:T:C	rs9380204	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	31022303	31022304	chr6:31022304:T:A	rs116071718	T	A	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.007267207914503	7.604407200393974	TGTAATTAGC
chr6	31041871	31041872	chr6:31041872:T:G	rs2517543	T	G	-	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr6	31095037	31095038	chr6:31095038:C:A	rs73388867	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.277319169927424	5.593248346613261	GGTCATTAGG
chr6	31107703	31107704	chr6:31107704:A:G	rs2844635	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr6	31121347	31121348	chr6:31121348:A:G	rs3132545	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	31210965	31210966	chr6:31210966:T:G	rs3132504	T	G	G	Hoxd3.mouse_homeodomain_1	6	1	+	7.376359977658197	6.060752241187355	GCTAATTAGC
chr6	31238990	31238991	chr6:31238991:C:T	rs73728438	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	31368028	31368029	chr6:31368029:A:T	rs9266399	A	T	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	31398086	31398087	chr6:31398087:C:T	rs58749093	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	31398091	31398092	chr6:31398092:G:C	rs12661317	G	C	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	31453429	31453430	chr6:31453430:T:C	rs2263315	T	C	-	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	31525643	31525644	chr6:31525644:T:A	rs3093986	T	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	31526960	31526961	chr6:31526961:C:A	rs2734573	C	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	31541265	31541266	chr6:31541266:G:T	rs77639798	G	T	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	31541273	31541274	chr6:31541274:G:A	rs151223084	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	31814366	31814367	chr6:31814367:G:C	rs542281670	G	C	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	32905429	32905430	chr6:32905430:A:T	rs74486463	A	T	a	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	33017635	33017636	chr6:33017636:A:G	rs1346932	A	G	A	Hoxd3.mouse_homeodomain_1	9	1	-	7.300090444404122	7.595207023573987	GGTAATTAAT
chr6	33021629	33021630	chr6:33021630:G:T	rs115567195	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	33050864	33050865	chr6:33050865:G:A	rs10434852	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr6	33053129	33053130	chr6:33053130:T:C	rs7763404	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	33053151	33053152	chr6:33053152:A:G	rs7743129	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	33053637	33053638	chr6:33053638:C:T	rs9277140	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	33123676	33123677	chr6:33123677:G:A	rs9277723	G	A	g	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	33139465	33139466	chr6:33139466:C:T	rs7771578	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	33139799	33139800	chr6:33139800:G:A	rs3129255	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.685552352237077	6.525744850394987	CGCAATTAAC
chr6	33249509	33249510	chr6:33249510:G:A	rs188853405	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	33288693	33288694	chr6:33288694:T:C	rs3130257	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	33315988	33315989	chr6:33315989:T:C	rs3130100	T	C	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	33839779	33839780	chr6:33839780:C:T	rs116277862	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	34393264	34393265	chr6:34393265:T:A	rs149082113	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	35495372	35495373	chr6:35495373:C:A	rs114753628	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	35539778	35539779	chr6:35539779:C:G	rs4713888	C	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	36593598	36593599	chr6:36593599:C:T	rs114403297	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	36593606	36593607	chr6:36593607:G:A	rs758098491	G	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	36655465	36655466	chr6:36655466:A:T	rs4331968	A	T	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	36709665	36709666	chr6:36709666:A:G	rs9470376	A	G	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	37616119	37616120	chr6:37616120:C:T	rs17742587	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	37723184	37723185	chr6:37723185:G:A	rs9632491	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	37777186	37777187	chr6:37777187:G:A	rs4711512	G	A	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr6	37780082	37780083	chr6:37780083:A:C	rs12193708	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	38119902	38119903	chr6:38119903:C:A	rs11759483	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	38272308	38272309	chr6:38272309:T:C	rs9470848	T	C	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.341301925657738	6.800863923966783	ACTAATTAAG
chr6	38370564	38370565	chr6:38370565:G:A	rs13204569	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	38495872	38495873	chr6:38495873:T:C	rs17650092	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.501233327402089	3.3446739260654783	AGTAATTAAG
chr6	39156671	39156672	chr6:39156672:T:G	rs1544935	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	39182321	39182322	chr6:39182322:G:A	rs1428373	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	39200575	39200576	chr6:39200576:T:G	rs115674743	T	G	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	39932763	39932764	chr6:39932764:A:G	rs62403569	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	40329103	40329104	chr6:40329104:A:C	rs112533137	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.2190107174197315	5.90340298094889	AGTAATTACC
chr6	40352334	40352335	chr6:40352335:C:G	rs12206539	C	G	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.503391442821062	7.341301925657738	ACTAATTAAC
chr6	40419909	40419910	chr6:40419910:C:G	rs9367056	C	G	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	40726352	40726353	chr6:40726353:T:C	rs6458175	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	40891176	40891177	chr6:40891177:C:A	rs11758150	C	A	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr6	40912752	40912753	chr6:40912753:G:T	rs9381008	G	T	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.904037796958669	6.168867764284497	ACCAATTAGC
chr6	41226884	41226885	chr6:41226885:C:T	rs6916157	C	T	-	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr6	41247446	41247447	chr6:41247447:C:A	rs916625071	C	A	c	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	41560830	41560831	chr6:41560831:T:C	chr6:41560831:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.300090444404122	6.7596524427131675	GGTAATTAAT
chr6	41663991	41663992	chr6:41663992:T:G	rs6899312	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr6	41762820	41762821	chr6:41762821:G:C	rs114945936	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr6	41767333	41767334	chr6:41767334:T:A	rs115720645	T	A	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr6	42189653	42189654	chr6:42189654:G:A	rs59004693	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr6	42224842	42224843	chr6:42224843:C:T	rs78273889	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	42224843	42224844	chr6:42224844:G:A	rs6915565	G	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	42249361	42249362	chr6:42249362:C:A	rs58170583	C	A	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.220683642931706	5.485513610257534	GGTAATGAGC
chr6	42314127	42314128	chr6:42314128:T:C	rs186594160	T	C	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	42454717	42454718	chr6:42454718:T:A	rs260268	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	42454741	42454742	chr6:42454742:C:G	rs260267	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.054769021883032	6.685552352237077	GGCAATTAAC
chr6	42564772	42564773	chr6:42564773:C:T	rs62414599	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	42772530	42772531	chr6:42772531:T:G	rs58910274	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	42889467	42889468	chr6:42889468:C:T	rs7952	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	43813790	43813791	chr6:43813791:C:T	rs2396086	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	44003089	44003090	chr6:44003090:G:A	rs2295334	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	44003120	44003121	chr6:44003121:A:G	rs114544123	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.063900836764708	5.075042934851526	CGTAATTAAG
chr6	45791256	45791257	chr6:45791257:G:A	rs7744773	G	A	A	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	46469818	46469819	chr6:46469819:T:C	rs4711852	T	C	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	46677137	46677138	chr6:46677138:C:T	rs2270450	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	46948176	46948177	chr6:46948177:C:T	rs13205637	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	47836907	47836908	chr6:47836908:A:T	rs16876605	A	T	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	48111281	48111282	chr6:48111282:T:C	rs4715063	T	C	t	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr6	48472458	48472459	chr6:48472459:T:G	rs2396865	T	G	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	48513123	48513124	chr6:48513124:C:T	rs1011882492	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr6	49002767	49002768	chr6:49002768:T:G	rs4431432	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr6	49205770	49205771	chr6:49205771:G:A	rs2516112	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	49329135	49329136	chr6:49329136:A:C	rs79761846	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	49767622	49767623	chr6:49767623:C:T	rs13195635	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	51260394	51260395	chr6:51260395:G:A	rs72904147	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	51931300	51931301	chr6:51931301:G:A	rs9357718	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	52356136	52356137	chr6:52356137:C:T	rs6917990	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	52745043	52745044	chr6:52745044:T:C	rs2748998	T	C	c	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	53361755	53361756	chr6:53361756:G:A	rs78692655	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	53361776	53361777	chr6:53361777:T:G	rs552821283	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.066058952183682	6.6217468250380005	CCTAATTAAC
chr6	53484076	53484077	chr6:53484077:A:G	rs9474566	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	53624603	53624604	chr6:53624604:C:T	rs11962201	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	53929108	53929109	chr6:53929109:T:G	chr6:53929109:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	54263301	54263302	chr6:54263302:C:G	rs72964051	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	54321102	54321103	chr6:54321103:G:C	rs2297985	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	54736726	54736727	chr6:54736727:T:G	rs9296765	T	G	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	54736744	54736745	chr6:54736745:T:C	rs9474984	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.6738324588039175	4.684974556890735	GCCAATTAGG
chr6	55659524	55659525	chr6:55659525:T:C	rs72973155	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	55704612	55704613	chr6:55704613:G:T	rs961571	G	T	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	55774710	55774711	chr6:55774711:T:C	rs79050230	T	C	t	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	56096488	56096489	chr6:56096489:T:C	rs62404894	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr6	56241174	56241175	chr6:56241175:C:T	rs12205794	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	56576666	56576667	chr6:56576667:C:T	rs6931836	C	T	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	57070125	57070126	chr6:57070126:T:G	rs982811937	T	G	t	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr6	57315326	57315327	chr6:57315327:C:T	rs75441032	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	61618818	61618819	chr6:61618819:G:A	rs9343452	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	63868756	63868757	chr6:63868757:G:A	rs145936724	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	64669949	64669950	chr6:64669950:C:T	rs1338821	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	7.122884842874458	7.663322844565413	AGCAATTAAC
chr6	65247666	65247667	chr6:65247667:G:A	rs17580078	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	65399033	65399034	chr6:65399034:C:T	rs34568300	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	65700240	65700241	chr6:65700241:C:T	rs9363422	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.741948279795344	7.282386281486299	ACCAATTAGG
chr6	66750737	66750738	chr6:66750738:T:C	rs716140	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	68181147	68181148	chr6:68181148:T:C	rs368709902	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.525620950492726	4.5367630485795445	CCCAATTAAC
chr6	68729593	68729594	chr6:68729594:C:T	rs9294806	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	68881987	68881988	chr6:68881988:T:C	rs562537	T	C	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	69620077	69620078	chr6:69620078:C:T	rs12110750	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.300090444404122	6.632369677700721	GGTAATTAAT
chr6	69625682	69625683	chr6:69625683:A:G	rs13218004	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	69815786	69815787	chr6:69815787:A:G	rs13195232	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	69856376	69856377	chr6:69856377:A:G	rs2502570	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.962953441130107	6.894837620138681	ACCAATTAAC
chr6	69866262	69866263	chr6:69866263:C:T	rs138578735	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.450525492992999	5.926386071423187	GCCAATTACC
chr6	69867331	69867332	chr6:69867332:G:A	rs116564277	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	69867344	69867345	chr6:69867345:G:A	rs1370400506	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	70651198	70651199	chr6:70651199:C:T	rs149654577	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	70888545	70888546	chr6:70888546:G:C	rs10945264	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr6	70973921	70973922	chr6:70973922:T:C	rs6930956	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	71366162	71366163	chr6:71366163:A:G	rs75413280	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	71488215	71488216	chr6:71488216:A:G	rs543827	A	G	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr6	72076483	72076484	chr6:72076484:C:T	rs80200934	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr6	72425385	72425386	chr6:72425386:T:C	rs72937437	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	72559334	72559335	chr6:72559335:A:G	rs1202122	A	G	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	72931774	72931775	chr6:72931775:T:C	rs112916680	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.61045689473735	3.7503604511766024	GGCAATTACC
chr6	73264827	73264828	chr6:73264828:G:A	rs3734511	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	73460354	73460355	chr6:73460355:G:C	rs72960023	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	73650971	73650972	chr6:73650972:T:C	rs1703467	T	C	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr6	73885543	73885544	chr6:73885544:C:T	rs73466404	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	75454778	75454779	chr6:75454779:T:C	rs9447486	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	75613716	75613717	chr6:75613717:G:A	rs75560193	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr6	77624796	77624797	chr6:77624797:A:G	rs1458410	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.503391442821062	4.643294999260315	ACTAATTAAC
chr6	77787326	77787327	chr6:77787327:T:C	rs1586108	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	77787359	77787360	chr6:77787360:C:G	rs9341694	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	78701687	78701688	chr6:78701688:A:C	rs75903811	A	C	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	78718306	78718307	chr6:78718307:G:A	rs1180819	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	79047216	79047217	chr6:79047217:A:G	rs9448616	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr6	79263720	79263721	chr6:79263721:T:G	rs7763232	T	G	G	Hoxd3.mouse_homeodomain_1	2	1	+	7.066058952183682	3.1589638940827482	CCTAATTAAC
chr6	79763175	79763176	chr6:79763176:A:G	rs16891034	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr6	79808531	79808532	chr6:79808532:G:T	rs9352767	G	T	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	80194424	80194425	chr6:80194425:A:G	rs77899872	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	80338418	80338419	chr6:80338419:A:G	rs2322756	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	80454545	80454546	chr6:80454546:G:A	rs1008084892	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.220683642931706	6.288799463923133	GGTAATGAGC
chr6	81216811	81216812	chr6:81216812:G:A	rs9344130	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr6	81684055	81684056	chr6:81684056:G:A	rs9350934	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	81688203	81688204	chr6:81688204:A:T	rs1145872	A	T	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	81941376	81941377	chr6:81941377:C:T	rs55922108	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	82208157	82208158	chr6:82208158:T:A	rs4706941	T	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	82208186	82208187	chr6:82208187:A:C	rs4706942	A	C	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	82955064	82955065	chr6:82955065:G:A	rs59491134	G	A	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr6	83042591	83042592	chr6:83042592:C:T	rs148234966	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	83192436	83192437	chr6:83192437:C:A	rs73749740	C	A	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	83411993	83411994	chr6:83411994:C:G	rs3798887	C	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr6	84583992	84583993	chr6:84583993:G:C	rs4571536	G	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	84618131	84618132	chr6:84618132:G:A	rs17190487	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	84645866	84645867	chr6:84645867:A:C	rs4470818	A	C	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	84658194	84658195	chr6:84658195:C:T	rs13200477	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	85450984	85450985	chr6:85450985:C:T	rs881795	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	85866738	85866739	chr6:85866739:G:A	chr6:85866739:G:A	G	A	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr6	86201259	86201260	chr6:86201260:C:T	rs6910532	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	86423797	86423798	chr6:86423798:C:T	rs77124426	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr6	86512162	86512163	chr6:86512163:C:G	rs61369689	C	G	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.604407200393974	7.2190107174197315	AGTAATTAGC
chr6	86856600	86856601	chr6:86856601:A:G	rs9450537	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	7.376359977658197	5.387502075745015	GCTAATTAGC
chr6	86859664	86859665	chr6:86859665:C:A	rs12525091	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr6	87502335	87502336	chr6:87502336:A:C	rs2300908	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr6	87598892	87598893	chr6:87598893:C:T	rs12662677	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.063900836764708	6.904093334922617	CGTAATTAAG
chr6	87598893	87598894	chr6:87598894:G:A	rs9450756	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.063900836764708	6.396180070061307	CGTAATTAAG
chr6	87831903	87831904	chr6:87831904:G:A	rs2477307	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	89086914	89086915	chr6:89086915:C:G	rs67192740	C	G	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	89205684	89205685	chr6:89205685:C:A	rs2297391	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr6	89469025	89469026	chr6:89469026:G:A	rs7766304	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr6	89716550	89716551	chr6:89716551:C:T	rs9342205	C	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr6	90092177	90092178	chr6:90092178:A:G	rs77204111	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	7.007267207914503	4.174316256744802	TGTAATTAGC
chr6	90295007	90295008	chr6:90295008:C:G	chr6:90295008:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr6	90400087	90400088	chr6:90400088:G:C	rs116459411	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	90413774	90413775	chr6:90413775:C:A	rs7745771	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	90413801	90413802	chr6:90413802:G:T	rs144716657	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	90414051	90414052	chr6:90414052:G:A	chr6:90414052:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	91172616	91172617	chr6:91172617:A:G	rs6942007	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr6	91353051	91353052	chr6:91353052:A:T	rs370320177	A	T	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	92114248	92114249	chr6:92114249:G:A	rs10944562	G	A	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	92459868	92459869	chr6:92459869:C:T	rs1427147	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	93942598	93942599	chr6:93942599:T:A	rs55744359	T	A	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	93970859	93970860	chr6:93970860:C:G	rs6907262	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	94637302	94637303	chr6:94637303:T:C	rs1357692023	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	94637322	94637323	chr6:94637323:G:A	rs7770438	G	A	G	Hoxd3.mouse_homeodomain_1	3	1	-	6.279477285346397	5.286862645827619	GCTCATTAGC
chr6	95227587	95227588	chr6:95227588:T:G	rs996105800	T	G	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	95367839	95367840	chr6:95367840:A:G	rs920702	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	96014291	96014292	chr6:96014292:G:A	rs1546898	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.277319169927424	6.336234814098862	GGTCATTAGG
chr6	96721393	96721394	chr6:96721394:C:G	rs12528627	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	97214893	97214894	chr6:97214894:G:A	rs4342433	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	97214907	97214908	chr6:97214908:G:A	rs4409186	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	7.063900836764708	6.396180070061307	CGTAATTAAG
chr6	98483500	98483501	chr6:98483501:T:G	rs9491648	T	G	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	99534462	99534463	chr6:99534463:A:G	rs2038715	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	99646084	99646085	chr6:99646085:G:A	rs59085465	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	99931610	99931611	chr6:99931611:G:A	rs118177624	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr6	99931622	99931623	chr6:99931623:G:C	rs117238492	G	C	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	100127015	100127016	chr6:100127016:G:C	rs148702078	G	C	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	100268109	100268110	chr6:100268110:T:C	rs570121509	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	100891523	100891524	chr6:100891524:C:T	rs7771570	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	100952121	100952122	chr6:100952122:T:G	rs678988	T	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	100952122	100952123	chr6:100952123:G:C	rs7774890	G	C	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	101428779	101428780	chr6:101428780:C:T	rs72957647	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	101467399	101467400	chr6:101467400:A:T	rs2579935	A	T	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	101596623	101596624	chr6:101596624:T:A	rs9377283	T	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	7.503391442821062	6.709305765975452	ACTAATTAAC
chr6	102355637	102355638	chr6:102355638:G:A	rs9499055	G	A	a	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	102815412	102815413	chr6:102815413:C:T	rs79644995	C	T	c	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr6	103143158	103143159	chr6:103143159:G:A	rs523819	G	A	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	103395026	103395027	chr6:103395027:C:G	rs61404471	C	G	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	103913284	103913285	chr6:103913285:G:C	rs138199957	G	C	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	105398030	105398031	chr6:105398031:G:A	rs6910880	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.835921975967242	6.540805396797378	GCCAATTAGC
chr6	105594188	105594189	chr6:105594189:C:T	rs889005525	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	105753732	105753733	chr6:105753733:G:A	rs4946689	G	A	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	105832578	105832579	chr6:105832579:G:T	rs73510155	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.995853377711593	5.192819436747819	GGCAATTAGC
chr6	105839295	105839296	chr6:105839296:T:C	rs12153985	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	105846404	105846405	chr6:105846405:G:A	rs111639311	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	106039887	106039888	chr6:106039888:C:T	rs9480636	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	106360318	106360319	chr6:106360319:C:A	rs6905583	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	106547639	106547640	chr6:106547640:G:A	rs1676028	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr6	106561214	106561215	chr6:106561215:G:A	rs965347	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	106561243	106561244	chr6:106561244:A:G	rs4946764	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	106622575	106622576	chr6:106622576:G:A	rs6925512	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	106833834	106833835	chr6:106833835:A:G	rs77992378	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	107314541	107314542	chr6:107314542:T:C	rs137882723	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	107712316	107712317	chr6:107712317:G:C	rs1739864	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	107806430	107806431	chr6:107806431:G:T	rs9486720	G	T	g	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	107808040	107808041	chr6:107808041:A:G	rs6940587	A	G	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	107862423	107862424	chr6:107862424:A:C	rs500932	A	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr6	108116785	108116786	chr6:108116786:G:T	rs116925534	G	T	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	108676236	108676237	chr6:108676237:G:A	rs188395043	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	109484513	109484514	chr6:109484514:T:C	rs73520943	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	110425322	110425323	chr6:110425323:T:C	rs7756222	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	110665132	110665133	chr6:110665133:G:A	rs983801138	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	110681754	110681755	chr6:110681755:A:G	rs79137173	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	110815437	110815438	chr6:110815438:G:A	rs914125535	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	110852969	110852970	chr6:110852970:G:A	rs812439	G	A	g	Hoxd3.mouse_homeodomain_1	0	1	+	7.273186104666311	7.341301925657738	GCTAATTAAG
chr6	110959104	110959105	chr6:110959105:T:G	rs143224507	T	G	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	110959128	110959129	chr6:110959129:G:C	rs9374225	G	C	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	111580566	111580567	chr6:111580567:C:T	rs2075967	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	111586782	111586783	chr6:111586783:T:C	rs367901397	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	111606036	111606037	chr6:111606037:A:G	rs78707591	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.741948279795344	4.753090377882162	ACCAATTAGG
chr6	111663805	111663806	chr6:111663806:T:A	rs9374270	T	A	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr6	111858728	111858729	chr6:111858729:G:A	rs7768046	G	A	A	Hoxd3.mouse_homeodomain_1	1	1	+	6.901879681539695	6.234158914836294	AGCAATTAGG
chr6	111985611	111985612	chr6:111985612:T:C	rs74581555	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr6	112979966	112979967	chr6:112979967:G:A	rs6941679	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr6	113048121	113048122	chr6:113048122:A:C	rs78254924	A	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	113148609	113148610	chr6:113148610:C:T	rs2502386	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	113293289	113293290	chr6:113293290:G:A	rs62421482	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	113440389	113440390	chr6:113440390:C:T	rs9320454	C	T	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	113494102	113494103	chr6:113494103:A:T	rs111776647	A	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	7.300090444404122	7.048217824649052	GGTAATTAAT
chr6	113704392	113704393	chr6:113704393:C:G	rs17788244	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr6	113742254	113742255	chr6:113742255:G:A	rs2463311	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	113847385	113847386	chr6:113847386:G:T	rs7776080	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	115064893	115064894	chr6:115064894:G:A	rs1036126	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr6	115585150	115585151	chr6:115585151:C:T	rs10046209	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	116205411	116205412	chr6:116205412:C:T	rs1211388	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	6.707147650556478	AGTAATTACG
chr6	116328319	116328320	chr6:116328320:A:G	rs10782184	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.503391442821062	5.51453354090788	ACTAATTAAC
chr6	117189039	117189040	chr6:117189040:G:T	rs6901720	G	T	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	117389931	117389932	chr6:117389932:A:G	rs186980713	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	117516407	117516408	chr6:117516408:T:C	rs9387486	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr6	118278031	118278032	chr6:118278032:A:T	rs530109264	A	T	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	118666988	118666989	chr6:118666989:C:T	rs11153768	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.341301925657738	6.956402243896128	ACTAATTAAG
chr6	118681417	118681418	chr6:118681418:A:T	rs17349301	A	T	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	118889222	118889223	chr6:118889223:T:C	rs1446137736	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	119241208	119241209	chr6:119241209:T:C	rs117377370	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	119241209	119241210	chr6:119241210:T:C	rs188076692	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	119278281	119278282	chr6:119278282:A:T	rs6922115	A	T	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	119297571	119297572	chr6:119297572:A:G	rs17052758	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	119728368	119728369	chr6:119728369:C:T	rs76802080	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	119759066	119759067	chr6:119759067:C:T	rs1539110	C	T	c	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	119895334	119895335	chr6:119895335:G:A	rs9374844	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.892679504719707	6.960795325711134	GGCAATTAAG
chr6	120141816	120141817	chr6:120141817:G:A	rs79423570	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr6	120498752	120498753	chr6:120498753:G:A	rs76514106	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	7.05741800146904	GGTAATTAGA
chr6	121967794	121967795	chr6:121967795:G:A	rs7747083	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr6	121992119	121992120	chr6:121992120:A:G	rs9490378	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	122363319	122363320	chr6:122363320:A:G	rs7742289	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	122408082	122408083	chr6:122408083:T:C	rs556675	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	122723299	122723300	chr6:122723300:G:A	rs4132478	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	122723310	122723311	chr6:122723311:G:T	rs4132479	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	122772530	122772531	chr6:122772531:C:T	rs7758372	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	122772568	122772569	chr6:122772569:C:T	rs72966600	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr6	123601578	123601579	chr6:123601579:C:G	rs1321877	C	G	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	124189781	124189782	chr6:124189782:C:T	rs1916786	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	124595858	124595859	chr6:124595859:A:G	rs472059	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	124630487	124630488	chr6:124630488:T:G	rs477242	T	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	125747158	125747159	chr6:125747159:T:C	rs577321175	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr6	126096230	126096231	chr6:126096231:T:C	rs6926385	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	127390786	127390787	chr6:127390787:C:A	rs11154402	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	127963625	127963626	chr6:127963626:G:A	rs802721	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	128138966	128138967	chr6:128138967:A:G	rs12110728	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	128258702	128258703	chr6:128258703:G:A	rs1738276	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	128504549	128504550	chr6:128504550:G:A	rs28360647	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	128656334	128656335	chr6:128656335:A:G	rs7771173	A	G	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr6	128676561	128676562	chr6:128676562:C:T	rs11961059	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.304615789157963	6.845053790848919	CCCAATTAGG
chr6	128725699	128725700	chr6:128725700:C:T	rs6933496	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	128809125	128809126	chr6:128809126:T:C	rs1508453	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr6	128981901	128981902	chr6:128981902:C:A	rs78072825	C	A	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	129710215	129710216	chr6:129710216:C:T	rs558980600	C	T	C	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr6	130070741	130070742	chr6:130070742:G:A	rs7759381	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	130604834	130604835	chr6:130604835:C:T	rs1933756	C	T	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	130969333	130969334	chr6:130969334:G:T	rs9372985	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	131042100	131042101	chr6:131042101:G:C	rs58130017	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.30929062122411	6.923894138249867	AGTAATTAGT
chr6	131103984	131103985	chr6:131103985:T:C	rs117828911	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	131510365	131510366	chr6:131510366:C:T	rs9493008	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	131761398	131761399	chr6:131761399:C:T	rs7740856	C	T	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	131947231	131947232	chr6:131947232:G:A	rs79044527	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr6	132392215	132392216	chr6:132392216:T:A	rs760513192	T	A	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	132392229	132392230	chr6:132392230:G:A	rs746429929	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	132392249	132392250	chr6:132392250:T:A	rs79276614	T	A	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr6	132798990	132798991	chr6:132798991:T:C	rs73772954	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr6	133599962	133599963	chr6:133599963:G:T	rs79753905	G	T	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr6	133960150	133960151	chr6:133960151:C:A	rs17063210	C	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	134052779	134052780	chr6:134052780:A:G	rs17063315	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	134052780	134052781	chr6:134052781:C:T	rs574528541	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	134166075	134166076	chr6:134166076:G:A	rs2758150	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	134446126	134446127	chr6:134446127:G:A	rs9493961	G	A	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	134640177	134640178	chr6:134640178:T:C	rs7765188	T	C	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	134664848	134664849	chr6:134664849:C:A	rs56851789	C	A	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.901879681539695	5.098845740575922	AGCAATTAGG
chr6	134758478	134758479	chr6:134758479:G:A	rs7749709	G	A	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr6	135022360	135022361	chr6:135022361:C:G	rs949547	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	135795338	135795339	chr6:135795339:T:C	rs6925090	T	C	t	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr6	135991322	135991323	chr6:135991323:G:A	rs76394910	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	136290803	136290804	chr6:136290804:A:G	rs1385500640	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	136957140	136957141	chr6:136957141:A:G	rs116999856	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.904037796958669	4.071086845788967	ACCAATTAGC
chr6	136970111	136970112	chr6:136970112:C:T	rs111388793	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	136970142	136970143	chr6:136970143:A:C	rs6937795	A	C	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr6	136970157	136970158	chr6:136970158:T:G	rs6917676	T	G	T	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr6	136983289	136983290	chr6:136983290:T:C	rs947733	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	137194396	137194397	chr6:137194397:T:C	rs946148110	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	137390675	137390676	chr6:137390676:G:A	rs4896265	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.225990353928032	7.066182852085942	CGTAATTAAC
chr6	137518040	137518041	chr6:137518041:T:G	rs7356966	T	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	137603127	137603128	chr6:137603128:C:T	rs1336512	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	137603328	137603329	chr6:137603329:T:C	rs9389524	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr6	138117585	138117586	chr6:138117586:T:C	rs1537621	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr6	138128417	138128418	chr6:138128418:T:C	rs7773257	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr6	138160979	138160980	chr6:138160980:T:C	rs57216170	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	138971254	138971255	chr6:138971255:C:G	chr6:138971255:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	139187749	139187750	chr6:139187750:C:A	rs143674293	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr6	140897922	140897923	chr6:140897923:C:T	rs9484448	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	141529058	141529059	chr6:141529059:C:A	rs34848860	C	A	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr6	142177305	142177306	chr6:142177306:T:C	rs225667	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	142871712	142871713	chr6:142871713:T:C	rs198674	T	C	C	Hoxd3.mouse_homeodomain_1	7	1	-	7.44231768323065	3.2857582818940396	AGTAATTAGG
chr6	142904314	142904315	chr6:142904315:A:G	rs9373367	A	G	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	143276741	143276742	chr6:143276742:A:G	rs9399433	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	143586061	143586062	chr6:143586062:G:C	rs9390115	G	C	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	143592397	143592398	chr6:143592398:C:T	rs9321929	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	144279598	144279599	chr6:144279599:G:T	rs584283	G	T	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr6	144289235	144289236	chr6:144289236:A:C	rs636799	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.8337638605482685	5.518156124077427	GGCAATTAGG
chr6	144289242	144289243	chr6:144289243:T:G	rs615755	T	G	g	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	144447394	144447395	chr6:144447395:T:C	rs9496976	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	144678867	144678868	chr6:144678868:A:C	rs73599519	A	C	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	145554735	145554736	chr6:145554736:C:T	rs61358848	C	T	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	145554761	145554762	chr6:145554762:T:C	rs61638226	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	145784046	145784047	chr6:145784047:C:T	rs73568185	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	145815449	145815450	chr6:145815450:G:A	rs769691940	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr6	146730512	146730513	chr6:146730513:C:T	rs73575926	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	146776089	146776090	chr6:146776090:G:A	rs57345809	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr6	146803870	146803871	chr6:146803871:G:A	rs561498683	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	146803872	146803873	chr6:146803873:A:G	rs259389	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	146840357	146840358	chr6:146840358:A:C	rs60026048	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	146888089	146888090	chr6:146888090:T:G	rs9390437	T	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	147875000	147875001	chr6:147875001:C:T	rs616122	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	148212424	148212425	chr6:148212425:T:C	rs76372616	T	C	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	148508449	148508450	chr6:148508450:A:T	rs187527589	A	T	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	148514266	148514267	chr6:148514267:C:T	rs137988330	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	148514279	148514280	chr6:148514280:C:T	rs1057793	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	148514292	148514293	chr6:148514293:T:G	rs202111293	T	G	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr6	148648517	148648518	chr6:148648518:C:T	rs56278915	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr6	148792009	148792010	chr6:148792010:C:T	rs35751268	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	148958051	148958052	chr6:148958052:T:C	rs9386240	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr6	149034339	149034340	chr6:149034340:T:C	rs4335010	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr6	149779293	149779294	chr6:149779294:C:T	rs9505974	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	150023947	150023948	chr6:150023948:G:A	rs4242285	G	A	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	150023968	150023969	chr6:150023969:A:T	rs11752629	A	T	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr6	150068021	150068022	chr6:150068022:G:T	rs1762125	G	T	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr6	150175681	150175682	chr6:150175682:A:C	rs6918104	A	C	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	150336405	150336406	chr6:150336406:T:C	rs1454738273	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr6	150356653	150356654	chr6:150356654:G:A	rs607612	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.741948279795344	6.800863923966783	ACCAATTAGG
chr6	150361518	150361519	chr6:150361519:T:C	rs4870501	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.6738324588039175	-0.16672476561474225	GCCAATTAGG
chr6	150361521	150361522	chr6:150361522:G:A	rs4869902	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	+	6.6738324588039175	6.732748102975356	GCCAATTAGG
chr6	150617467	150617468	chr6:150617468:C:G	rs931488	C	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	150713593	150713594	chr6:150713594:G:T	rs9371194	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.678572715728777	6.131583516803842	AGCAATTACC
chr6	151058527	151058528	chr6:151058528:A:G	rs9478934	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.995853377711593	4.135756934150845	GGCAATTAGC
chr6	151058533	151058534	chr6:151058534:C:G	rs76387334	C	G	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr6	151358462	151358463	chr6:151358463:G:C	rs7515	G	C	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr6	151603471	151603472	chr6:151603472:T:A	rs1110776	T	A	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	151900395	151900396	chr6:151900396:C:A	rs12174347	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	152272258	152272259	chr6:152272259:A:T	rs76541810	A	T	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	152758354	152758355	chr6:152758355:A:G	rs78206567	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	153002179	153002180	chr6:153002180:A:T	rs554930301	A	T	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.279477285346397	3.9360053426916695	GCTCATTAGC
chr6	153059857	153059858	chr6:153059858:A:T	rs2349432	A	T	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr6	153230924	153230925	chr6:153230925:G:A	rs13201432	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr6	153766296	153766297	chr6:153766297:T:G	rs12212325	T	G	T	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	153954942	153954943	chr6:153954943:T:C	rs643443	T	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	153977146	153977147	chr6:153977147:G:A	rs73022685	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	154272226	154272227	chr6:154272227:A:T	rs9322458	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.678572715728777	4.157962352374599	AGCAATTACC
chr6	154512920	154512921	chr6:154512921:T:C	rs62432735	T	C	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr6	155095393	155095394	chr6:155095394:G:A	rs13202771	G	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	155600729	155600730	chr6:155600730:C:T	rs1498630	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	155760824	155760825	chr6:155760825:G:A	rs4585574	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr6	155771838	155771839	chr6:155771839:T:C	rs7757748	T	C	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	156028235	156028236	chr6:156028236:C:T	rs9397892	C	T	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	156848542	156848543	chr6:156848543:A:G	rs58609565	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	157468418	157468419	chr6:157468419:G:T	rs4709270	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	157468424	157468425	chr6:157468425:G:C	rs9347285	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr6	157536582	157536583	chr6:157536583:C:A	rs9457716	C	A	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	157709614	157709615	chr6:157709615:C:T	rs4618554	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.433117506410662	6.765396739707261	GGTAATTAAG
chr6	157791676	157791677	chr6:157791677:G:A	rs4709592	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	157811500	157811501	chr6:157811501:A:G	rs16900456	A	G	G	Hoxd3.mouse_homeodomain_1	5	1	-	7.0639691987030195	0.22341197428436002	AGCAATTAGC
chr6	157886727	157886728	chr6:157886728:C:A	rs9347732	C	A	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr6	157991531	157991532	chr6:157991532:T:C	rs10455939	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	7.122884842874458	5.134026940961276	AGCAATTAAC
chr6	158233035	158233036	chr6:158233036:C:T	rs1481795590	C	T	c	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	158626349	158626350	chr6:158626350:T:C	rs34976165	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.678572715728777	6.61045689473735	AGCAATTACC
chr6	158795572	158795573	chr6:158795573:C:T	rs76025055	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	158835313	158835314	chr6:158835314:A:G	rs9347260	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.341301925657738	5.352444023744556	ACTAATTAAG
chr6	159224722	159224723	chr6:159224723:C:G	rs432598	C	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	159790664	159790665	chr6:159790665:C:T	rs9346795	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr6	159790667	159790668	chr6:159790668:C:G	rs9355278	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	159847341	159847342	chr6:159847342:A:G	rs1004252	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr6	160179104	160179105	chr6:160179105:T:G	rs791174	T	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr6	160776054	160776055	chr6:160776055:A:G	rs1620921	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr6	161016742	161016743	chr6:161016743:T:C	rs583856	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	161407222	161407223	chr6:161407223:G:C	rs115962829	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	161418632	161418633	chr6:161418633:C:G	rs138384525	C	G	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr6	161792993	161792994	chr6:161792994:G:A	rs2186809	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	161792994	161792995	chr6:161792995:A:C	rs3019429	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	161837246	161837247	chr6:161837247:G:C	rs62436133	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr6	162062518	162062519	chr6:162062519:A:T	rs4582353	A	T	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	162090990	162090991	chr6:162090991:C:T	rs7766005	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.273186104666311	7.341301925657738	GCTAATTAAG
chr6	162465145	162465146	chr6:162465146:A:G	rs73606380	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	162546063	162546064	chr6:162546064:T:C	rs6930532	T	C	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	163491883	163491884	chr6:163491884:T:C	rs16895056	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	163491888	163491889	chr6:163491889:C:T	rs117951222	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr6	163543451	163543452	chr6:163543452:G:A	rs4709721	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	163645682	163645683	chr6:163645683:C:T	rs10945913	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr6	164998859	164998860	chr6:164998860:G:T	rs35139346	G	T	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	165128574	165128575	chr6:165128575:G:T	rs16897396	G	T	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr6	165130777	165130778	chr6:165130778:T:A	rs2583820	T	A	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	165478857	165478858	chr6:165478858:C:T	rs221732	C	T	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr6	165598148	165598149	chr6:165598149:A:G	rs720701	A	G	G	Hoxd3.mouse_homeodomain_1	3	1	+	6.6738324588039175	4.684974556890735	GCCAATTAGG
chr6	166241613	166241614	chr6:166241614:G:A	rs9348103	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr6	166241619	166241620	chr6:166241620:T:C	rs9356449	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	166253378	166253379	chr6:166253379:G:C	rs556032896	G	C	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr6	166253411	166253412	chr6:166253412:C:T	rs80182764	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	166314202	166314203	chr6:166314203:T:C	rs9459648	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr6	166502623	166502624	chr6:166502624:G:A	rs77311400	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	166763445	166763446	chr6:166763446:T:C	rs388372	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	166820841	166820842	chr6:166820842:A:T	rs16899540	A	T	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	166937474	166937475	chr6:166937475:A:G	rs2757045	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr6	167291184	167291185	chr6:167291185:C:T	rs111853538	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.685552352237077	6.525744850394987	CGCAATTAAC
chr6	167441714	167441715	chr6:167441715:G:A	rs28702398	G	A	g	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	167461419	167461420	chr6:167461420:A:G	rs6605475	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr6	167461421	167461422	chr6:167461422:T:A	rs6605474	T	A	A	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr6	167517299	167517300	chr6:167517300:T:G	rs28401203	T	G	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	167646287	167646288	chr6:167646288:C:T	rs9718156	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	167646292	167646293	chr6:167646293:C:A	rs142531887	C	A	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	167661113	167661114	chr6:167661114:T:C	rs75956566	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	167925122	167925123	chr6:167925123:C:T	rs2301534	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr6	167928379	167928380	chr6:167928380:G:A	rs3778663	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr6	168140205	168140206	chr6:168140206:A:G	rs9455959	A	G	a	Hoxd3.mouse_homeodomain_1	8	1	+	6.962953441130107	6.904037796958669	ACCAATTAAC
chr6	168140221	168140222	chr6:168140222:C:T	rs9455960	C	T	c	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr6	168359980	168359981	chr6:168359981:G:T	rs76611061	G	T	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr6	168359986	168359987	chr6:168359987:G:A	rs73036386	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr6	168591219	168591220	chr6:168591220:C:T	rs57442430	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	168720798	168720799	chr6:168720799:G:A	rs150880716	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	168973432	168973433	chr6:168973433:T:C	rs34094599	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr6	169017679	169017680	chr6:169017680:G:C	rs111823950	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	169099450	169099451	chr6:169099451:C:T	rs12198826	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.122884842874458	6.455164076171057	AGCAATTAAC
chr6	169322138	169322139	chr6:169322139:C:T	rs7454285	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr6	169571450	169571451	chr6:169571451:C:G	rs11964564	C	G	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	169953958	169953959	chr6:169953959:C:T	rs933453694	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr7	162530	162531	chr7:162531:A:T	rs73671738	A	T	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	292502	292503	chr7:292503:T:G	rs144567362	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	460543	460544	chr7:460544:T:C	rs139485682	T	C	T	Hoxd3.mouse_homeodomain_1	7	1	-	7.536291379402548	3.379731978065938	GGTAATTAGC
chr7	460556	460557	chr7:460557:C:T	rs36155381	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	460566	460567	chr7:460567:G:A	rs147130939	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	503153	503154	chr7:503154:T:C	rs9692205	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr7	503190	503191	chr7:503191:C:T	rs9691780	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	668113	668114	chr7:668114:G:T	rs186655077	G	T	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	716553	716554	chr7:716554:C:T	rs529395120	C	T	c	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr7	809433	809434	chr7:809434:A:G	rs13244853	A	G	N	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	1066375	1066376	chr7:1066376:G:T	rs1104888	G	T	t	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	1289467	1289468	chr7:1289468:T:A	rs113670422	T	A	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.214270460494872	5.124773128664295	GCTAATTAGG
chr7	1341115	1341116	chr7:1341116:G:A	rs73268415	G	A	g	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	1703580	1703581	chr7:1703581:C:G	rs73040536	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.054769021883032	6.685552352237077	GGCAATTAAC
chr7	1854046	1854047	chr7:1854047:G:C	chr7:1854047:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.150894896428305	6.7816782267823505	GGTAATTACC
chr7	1854073	1854074	chr7:1854074:C:T	rs112988176	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr7	2017736	2017737	chr7:2017737:A:G	rs939949	A	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	2075149	2075150	chr7:2075150:A:G	rs3778938	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	2438637	2438638	chr7:2438638:G:A	rs17132410	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.225990353928032	6.558269587224632	CGTAATTAAC
chr7	2501764	2501765	chr7:2501765:A:G	rs73676712	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	2667934	2667935	chr7:2667935:T:A	rs7787264	T	A	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	2667948	2667949	chr7:2667949:A:G	rs760447752	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	3056733	3056734	chr7:3056734:A:C	rs543033333	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	3219006	3219007	chr7:3219007:G:A	rs41367353	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	3408948	3408949	chr7:3408949:A:G	rs11972454	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr7	3471482	3471483	chr7:3471483:G:A	rs10232431	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	3489857	3489858	chr7:3489858:A:G	rs73671854	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	3697309	3697310	chr7:3697310:G:A	rs1529655	G	A	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	4006750	4006751	chr7:4006751:G:A	rs11978290	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	4006760	4006761	chr7:4006761:G:A	rs10447643	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	4152411	4152412	chr7:4152412:C:T	rs59401494	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	4204505	4204506	chr7:4204506:C:T	rs28629320	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	4746536	4746537	chr7:4746537:A:C	rs541328600	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.376359977658197	6.279477285346397	GCTAATTAGC
chr7	4814532	4814533	chr7:4814533:G:A	rs143870564	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	5042405	5042406	chr7:5042406:C:T	rs7805748	C	T	t	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	5217826	5217827	chr7:5217827:G:A	rs143652877	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr7	5217858	5217859	chr7:5217859:T:C	rs7791896	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	5228884	5228885	chr7:5228885:C:A	rs11761408	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr7	5229792	5229793	chr7:5229793:A:C	rs7785898	A	C	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr7	5534314	5534315	chr7:5534315:A:G	rs852389	A	G	a	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	5557427	5557428	chr7:5557428:G:A	rs769234917	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr7	5872088	5872089	chr7:5872089:T:G	rs566023467	T	G	.	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	5872100	5872101	chr7:5872101:G:A	rs118071245	G	A	.	Hoxd3.mouse_homeodomain_1	0	1	+	7.374201862239223	7.44231768323065	GGTAATTAGG
chr7	6461085	6461086	chr7:6461086:A:G	rs79571214	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr7	6477152	6477153	chr7:6477153:T:C	rs1403782	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	6726346	6726347	chr7:6726347:G:A	rs28770501	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	6830079	6830080	chr7:6830080:T:C	rs115353708	T	C	t	Hoxd3.mouse_homeodomain_1	7	1	-	7.433117506410662	3.2765581050740518	GGTAATTAAG
chr7	7123021	7123022	chr7:7123022:A:G	rs73674629	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	7123057	7123058	chr7:7123058:C:G	rs73333557	C	G	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	7648194	7648195	chr7:7648195:T:G	rs1859604	T	G	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.892679504719707	6.448367377574026	GGCAATTAAG
chr7	7681745	7681746	chr7:7681746:C:G	rs78202090	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.9888053792649805	6.8288739775206295	GGTAATTACG
chr7	7681760	7681761	chr7:7681761:G:A	rs1348857367	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	7793101	7793102	chr7:7793102:C:T	rs7785423	C	T	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	8155018	8155019	chr7:8155019:G:A	rs13225396	G	A	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	8291090	8291091	chr7:8291091:G:A	rs11972640	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	8291126	8291127	chr7:8291127:A:G	rs1277883679	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	8354279	8354280	chr7:8354280:T:A	rs73063558	T	A	T	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr7	8985070	8985071	chr7:8985071:A:G	rs2192599	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	9278235	9278236	chr7:9278236:C:T	rs6948927	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	9507734	9507735	chr7:9507735:C:A	rs58480132	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	10142737	10142738	chr7:10142738:T:C	rs2215607	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr7	10919822	10919823	chr7:10919823:C:T	rs62438419	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	11460744	11460745	chr7:11460745:C:T	rs118134876	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	11475060	11475061	chr7:11475061:G:C	rs932853999	G	C	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	11544891	11544892	chr7:11544892:G:T	rs28478051	G	T	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	12458840	12458841	chr7:12458841:T:G	rs187294837	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr7	12507331	12507332	chr7:12507332:A:G	rs7787895	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	12899084	12899085	chr7:12899085:T:C	rs7785032	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.4444757986496235	5.455617896736442	ACTAATTAGC
chr7	13539745	13539746	chr7:13539746:C:T	rs9638696	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	13850747	13850748	chr7:13850748:G:C	rs74784002	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.8337638605482685	6.448367377574026	GGCAATTAGG
chr7	13939019	13939020	chr7:13939020:C:T	rs3801098	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	14457729	14457730	chr7:14457730:A:G	rs77327146	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	14605976	14605977	chr7:14605977:A:G	rs62445594	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.007267207914503	4.147170764353756	TGTAATTAGC
chr7	15414188	15414189	chr7:15414189:T:C	rs10479950	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	15581592	15581593	chr7:15581593:A:G	rs11772652	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	15593694	15593695	chr7:15593695:C:G	rs10486764	C	G	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	15594609	15594610	chr7:15594610:G:T	rs17168857	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr7	15594633	15594634	chr7:15594634:C:T	rs17331322	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.685552352237077	6.017831585533677	CGCAATTAAC
chr7	15683210	15683211	chr7:15683211:G:A	rs3801430	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	7.05741800146904	GGTAATTAGA
chr7	16348669	16348670	chr7:16348670:T:C	rs12666868	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr7	16528610	16528611	chr7:16528611:A:G	rs7807244	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	16528614	16528615	chr7:16528615:G:A	rs7807602	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	16762242	16762243	chr7:16762243:G:A	rs73299630	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	17011018	17011019	chr7:17011019:A:C	rs706082	A	C	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	17363008	17363009	chr7:17363009:A:G	rs111720235	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	17524018	17524019	chr7:17524019:T:C	rs75104284	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	17524025	17524026	chr7:17524026:G:A	rs17137805	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr7	17524057	17524058	chr7:17524058:T:G	rs1375234	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	18262153	18262154	chr7:18262154:G:T	rs4721704	G	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	18306606	18306607	chr7:18306607:G:A	rs1537408	G	A	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	18315389	18315390	chr7:18315390:T:C	rs633383	T	C	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	18495495	18495496	chr7:18495496:G:T	rs1279510754	G	T	G	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr7	18539038	18539039	chr7:18539039:G:T	rs117620945	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr7	18574401	18574402	chr7:18574402:G:A	rs117302965	G	A	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	19119955	19119956	chr7:19119956:A:G	rs575592912	A	G	a	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	19777035	19777036	chr7:19777036:G:A	rs12536561	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	19899460	19899461	chr7:19899461:A:G	rs6954874	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	20650956	20650957	chr7:20650957:C:T	rs76160218	C	T	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	20730641	20730642	chr7:20730642:T:C	rs62453387	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	21254985	21254986	chr7:21254986:T:G	rs17144142	T	G	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr7	21537126	21537127	chr7:21537127:C:T	rs7803792	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	21605367	21605368	chr7:21605368:G:A	rs11976814	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.525620950492726	7.066058952183682	CCCAATTAAC
chr7	21614983	21614984	chr7:21614984:C:T	rs7779983	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	6.707147650556478	AGTAATTACG
chr7	21656470	21656471	chr7:21656471:T:G	rs10499536	T	G	T	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	21827000	21827001	chr7:21827001:G:A	rs57424418	G	A	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	21856103	21856104	chr7:21856104:G:A	rs11979038	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	21911486	21911487	chr7:21911487:T:G	rs11978167	T	G	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.122884842874458	6.678572715728777	AGCAATTAAC
chr7	22074936	22074937	chr7:22074937:A:G	rs113346966	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	22082532	22082533	chr7:22082533:A:G	rs10271131	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	22802699	22802700	chr7:22802700:A:G	rs10262258	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	23067385	23067386	chr7:23067386:C:T	rs4722225	C	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	23971239	23971240	chr7:23971240:G:C	rs17356719	G	C	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	24038742	24038743	chr7:24038743:A:G	rs4722322	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	24165633	24165634	chr7:24165634:A:G	rs564893539	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr7	24725888	24725889	chr7:24725889:G:A	rs77626207	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	24773606	24773607	chr7:24773607:T:A	rs1978122	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr7	25171484	25171485	chr7:25171485:T:C	rs13235643	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.845053790848919	6.304615789157963	CCTAATTAGG
chr7	25217084	25217085	chr7:25217085:C:T	rs6955506	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.604407200393974	6.936686433690574	AGTAATTAGC
chr7	25304611	25304612	chr7:25304612:A:G	rs36044676	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	25352118	25352119	chr7:25352119:T:C	rs12700619	T	C	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	25455119	25455120	chr7:25455120:T:C	rs289990	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	25520891	25520892	chr7:25520892:G:A	rs731008	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	25630373	25630374	chr7:25630374:A:T	rs758430632	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	25835503	25835504	chr7:25835504:A:G	rs6974547	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr7	25835530	25835531	chr7:25835531:C:T	rs12700664	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	25845790	25845791	chr7:25845791:C:T	rs6461887	C	T	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr7	26204744	26204745	chr7:26204745:T:C	rs2391265	T	C	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	26238103	26238104	chr7:26238104:C:T	rs10275247	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	26421007	26421008	chr7:26421008:C:T	rs980200235	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	26555203	26555204	chr7:26555204:G:T	rs740184	G	T	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	27211037	27211038	chr7:27211038:T:C	rs191119952	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr7	27549329	27549330	chr7:27549330:C:T	rs7795207	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	27576298	27576299	chr7:27576299:T:C	rs140112467	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.501233327402089	6.960795325711134	AGTAATTAAG
chr7	27910645	27910646	chr7:27910646:T:C	rs73685856	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	28096917	28096918	chr7:28096918:T:C	rs144538350	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.44231768323065	4.582221239669903	AGTAATTAGG
chr7	28105411	28105412	chr7:28105412:T:C	rs1109483	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	28630345	28630346	chr7:28630346:C:G	rs984101	C	G	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	28630346	28630347	chr7:28630347:T:A	rs984103	T	A	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr7	29040253	29040254	chr7:29040254:C:T	rs4141275	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	29091877	29091878	chr7:29091878:A:G	rs2192508	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	29394566	29394567	chr7:29394567:C:G	rs10951220	C	G	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	29394567	29394568	chr7:29394568:T:G	rs10951221	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	29622856	29622857	chr7:29622857:C:T	rs10237670	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	29916762	29916763	chr7:29916763:A:G	rs1063694	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.8337638605482685	3.9736674169875204	GGCAATTAGG
chr7	30026288	30026289	chr7:30026289:A:G	rs17150688	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	30428761	30428762	chr7:30428762:G:A	rs5743367	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	30552141	30552142	chr7:30552142:C:T	rs38470	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.678572715728777	7.2190107174197315	AGCAATTACC
chr7	30586109	30586110	chr7:30586110:C:T	rs4722992	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	30702507	30702508	chr7:30702508:C:A	rs255124	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	31000121	31000122	chr7:31000122:G:T	rs7792595	G	T	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	32209835	32209836	chr7:32209836:G:C	rs11977265	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	32420823	32420824	chr7:32420824:T:G	rs10229071	T	G	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	32507826	32507827	chr7:32507827:C:T	rs10238940	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	33307319	33307320	chr7:33307320:G:A	rs10253342	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr7	33504025	33504026	chr7:33504026:A:G	rs12154346	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	34212384	34212385	chr7:34212385:G:A	rs75125527	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr7	34498043	34498044	chr7:34498044:A:G	chr7:34498044:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr7	34622130	34622131	chr7:34622131:C:T	rs10951423	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	34665388	34665389	chr7:34665389:A:G	rs2530567	A	G	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	34747805	34747806	chr7:34747806:G:A	rs17777663	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr7	35572703	35572704	chr7:35572704:T:G	rs73086839	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	35693990	35693991	chr7:35693991:T:C	rs10248708	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr7	35961459	35961460	chr7:35961460:A:C	rs180747244	A	C	a	Hoxd3.mouse_homeodomain_1	0	1	+	7.2190107174197315	6.7816782267823505	AGTAATTACC
chr7	36116279	36116280	chr7:36116280:G:T	rs532693395	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	36116297	36116298	chr7:36116298:C:T	rs558836184	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	5.898970685399792	5.603854106229928	GGCCATTAGC
chr7	36264072	36264073	chr7:36264073:C:T	rs196568	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	36441237	36441238	chr7:36441238:C:T	rs3801306	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.282386281486299	6.897486599724689	ACTAATTAGG
chr7	36441266	36441267	chr7:36441267:C:T	rs3801305	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	36881501	36881502	chr7:36881502:C:T	rs56023343	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	36916936	36916937	chr7:36916937:G:A	rs17170782	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	36972248	36972249	chr7:36972249:C:T	rs114532013	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.960795325711134	6.575895643949524	AGCAATTAAG
chr7	37005937	37005938	chr7:37005938:G:A	rs34699952	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	37371773	37371774	chr7:37371774:T:G	rs56282157	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	38160281	38160282	chr7:38160282:C:G	rs10807895	C	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	38163893	38163894	chr7:38163894:C:T	rs56356594	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	38163894	38163895	chr7:38163895:G:A	rs35505895	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	38213924	38213925	chr7:38213925:A:G	rs141832763	A	G	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	38263518	38263519	chr7:38263519:T:C	rs2109365	T	C	-	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	38304354	38304355	chr7:38304355:A:C	rs2736969	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	38336369	38336370	chr7:38336370:A:G	rs3948659	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	38398771	38398772	chr7:38398772:A:G	rs77939428	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	38630251	38630252	chr7:38630252:A:G	rs80079671	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	39535901	39535902	chr7:39535902:A:G	rs73375606	A	G	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	39566402	39566403	chr7:39566403:C:G	rs372274583	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.448367377574026	6.61045689473735	GGCAATTACG
chr7	39584103	39584104	chr7:39584104:C:A	rs17171605	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	39882636	39882637	chr7:39882637:T:C	rs568834829	T	C	t	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	40219937	40219938	chr7:40219938:C:T	rs116709762	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.901879681539695	6.960795325711134	AGCAATTAGG
chr7	40622207	40622208	chr7:40622208:T:C	rs190102349	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	41351080	41351081	chr7:41351081:C:A	rs10279659	C	A	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	42194480	42194481	chr7:42194481:C:A	rs1457408423	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	42459543	42459544	chr7:42459544:G:A	rs57356289	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	42478426	42478427	chr7:42478427:G:A	rs7810378	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr7	42868592	42868593	chr7:42868593:C:G	rs60327537	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	43362811	43362812	chr7:43362812:G:A	rs73326146	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr7	43363686	43363687	chr7:43363687:C:T	rs11760205	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	43363714	43363715	chr7:43363715:G:A	rs36014678	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr7	43451505	43451506	chr7:43451506:G:A	rs10253450	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	43456538	43456539	chr7:43456539:T:C	rs2304331	T	C	t	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	43528759	43528760	chr7:43528760:T:C	rs116752045	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	43615574	43615575	chr7:43615575:C:T	rs118149113	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	43615611	43615612	chr7:43615612:C:T	rs10215478	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr7	43824686	43824687	chr7:43824687:C:T	rs634988	C	T	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	44326986	44326987	chr7:44326987:A:G	rs541695090	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.700736798541729	3.840640354980981	GGCAATTAGT
chr7	44824902	44824903	chr7:44824903:C:T	rs144419703	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	44959114	44959115	chr7:44959115:G:A	rs6946581	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	45123176	45123177	chr7:45123177:G:A	rs116613207	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr7	45190962	45190963	chr7:45190963:A:G	rs11766978	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	45211760	45211761	chr7:45211761:C:T	rs34345812	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr7	45211771	45211772	chr7:45211772:A:T	rs16880990	A	T	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr7	45612027	45612028	chr7:45612028:G:A	rs118042005	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr7	46013997	46013998	chr7:46013998:G:A	rs2965079	G	A	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	46366535	46366536	chr7:46366536:A:G	rs12333796	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	46456999	46457000	chr7:46457000:G:A	rs34949116	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	46742171	46742172	chr7:46742172:T:A	rs34299183	T	A	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.501233327402089	5.411735995571511	AGTAATTAAG
chr7	46881242	46881243	chr7:46881243:T:A	rs6966227	T	A	A	Hoxd3.mouse_homeodomain_1	7	1	-	6.304615789157963	3.784005425803785	CCCAATTAGG
chr7	47320340	47320341	chr7:47320341:G:A	rs142215623	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	47743361	47743362	chr7:47743362:T:A	rs7798313	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr7	47759393	47759394	chr7:47759394:G:C	rs17627595	G	C	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	48085650	48085651	chr7:48085651:A:C	rs79288039	A	C	-	Hoxd3.mouse_homeodomain_1	7	1	+	6.835921975967242	2.9954227994151745	GCCAATTAGC
chr7	48263483	48263484	chr7:48263484:T:C	rs1526096	T	C	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	48283223	48283224	chr7:48283224:G:C	rs10278121	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	48409058	48409059	chr7:48409059:T:A	rs76113214	T	A	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	48426323	48426324	chr7:48426324:G:A	rs34691991	G	A	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	49106420	49106421	chr7:49106421:G:A	rs10281127	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	49138182	49138183	chr7:49138183:C:T	rs7807138	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	49176468	49176469	chr7:49176469:C:A	rs529146014	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	7.214270460494872	7.081243398488333	GCTAATTAGG
chr7	49176478	49176479	chr7:49176479:C:T	rs4571689	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	49527562	49527563	chr7:49527563:T:G	rs56013638	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	49554971	49554972	chr7:49554972:C:T	rs10255862	C	T	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	49878103	49878104	chr7:49878104:G:T	rs7809987	G	T	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	50266714	50266715	chr7:50266715:G:T	rs73346280	G	T	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	50309148	50309149	chr7:50309149:A:G	rs7782210	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	50309189	50309190	chr7:50309190:C:G	rs12718262	C	G	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	50480939	50480940	chr7:50480940:G:A	rs11575444	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	50480952	50480953	chr7:50480953:C:T	rs4948196	C	T	c	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	51081010	51081011	chr7:51081011:G:A	rs75759786	G	A	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	51289728	51289729	chr7:51289729:C:T	rs114007174	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	51761234	51761235	chr7:51761235:C:G	rs149814854	C	G	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.466705306321288	6.304615789157963	CCCAATTAGC
chr7	51957079	51957080	chr7:51957080:G:A	rs1031910	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	52547603	52547604	chr7:52547604:A:G	rs10258765	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.595207023573987	3.4386476222373767	GGTAATTAAC
chr7	53146509	53146510	chr7:53146510:T:C	rs1525574	T	C	N	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	54146070	54146071	chr7:54146071:G:A	rs2330676	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	54774066	54774067	chr7:54774067:T:C	rs370446314	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr7	54877939	54877940	chr7:54877940:A:G	chr7:54877940:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr7	55170770	55170771	chr7:55170771:T:G	rs10277413	T	G	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	55173188	55173189	chr7:55173189:G:A	rs17290301	G	A	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	55173219	55173220	chr7:55173220:G:A	rs17290308	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	55192664	55192665	chr7:55192665:G:C	rs17337353	G	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	55259579	55259580	chr7:55259580:T:C	rs7790808	T	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	55309330	55309331	chr7:55309331:C:T	rs867561	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	55327246	55327247	chr7:55327247:C:T	rs2272265	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	55365150	55365151	chr7:55365151:G:A	rs146307160	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr7	55477075	55477076	chr7:55477076:G:C	rs59323090	G	C	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr7	55527232	55527233	chr7:55527233:T:C	rs115484918	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.604407200393974	7.536291379402548	AGTAATTAGC
chr7	55527250	55527251	chr7:55527251:G:C	rs12112283	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	55609892	55609893	chr7:55609893:G:A	rs562427931	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr7	57244041	57244042	chr7:57244042:C:T	rs117165083	C	T	c	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	64307833	64307834	chr7:64307834:C:A	rs185990576	C	A	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	64653211	64653212	chr7:64653212:C:T	rs1104867	C	T	N	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	64689631	64689632	chr7:64689632:C:T	rs2862798	C	T	c	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr7	64904002	64904003	chr7:64904003:C:A	rs4718163	C	A	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	65269158	65269159	chr7:65269159:T:C	chr7:65269159:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	65301148	65301149	chr7:65301149:G:A	rs17710392	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	65438730	65438731	chr7:65438731:G:A	rs17711208	G	A	g	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr7	66152685	66152686	chr7:66152686:G:A	rs2292937	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	66304098	66304099	chr7:66304099:G:A	rs12531677	G	A	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	66535899	66535900	chr7:66535900:C:A	rs182989979	C	A	c	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	67512543	67512544	chr7:67512544:A:G	rs77342661	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.466705306321288	3.606608862760541	CCCAATTAGC
chr7	67522905	67522906	chr7:67522906:A:G	rs4479994	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	67765676	67765677	chr7:67765677:G:A	rs73139457	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr7	68064327	68064328	chr7:68064328:A:G	rs17145054	A	G	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	68185679	68185680	chr7:68185680:T:C	rs10085524	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	68247339	68247340	chr7:68247340:T:C	rs77878213	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr7	68476273	68476274	chr7:68476274:C:G	rs116406506	C	G	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	68889197	68889198	chr7:68889198:A:G	rs16868925	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	69060701	69060702	chr7:69060702:G:A	rs4541798	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr7	69359500	69359501	chr7:69359501:G:C	rs13311894	G	C	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	69439027	69439028	chr7:69439028:T:A	rs996255768	T	A	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr7	69657756	69657757	chr7:69657757:G:A	rs11764277	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr7	69819480	69819481	chr7:69819481:G:A	rs74634244	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr7	70143558	70143559	chr7:70143559:A:C	chr7:70143559:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr7	70585173	70585174	chr7:70585174:A:G	rs62455832	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr7	70618136	70618137	chr7:70618137:T:C	rs10227138	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	70661159	70661160	chr7:70661160:A:G	rs4718978	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	70728203	70728204	chr7:70728204:A:T	rs12533769	A	T	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr7	70977261	70977262	chr7:70977262:C:T	rs117664518	C	T	c	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	71222552	71222553	chr7:71222553:A:G	rs34701545	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr7	71413309	71413310	chr7:71413310:C:T	rs76661522	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	71461938	71461939	chr7:71461939:C:T	rs113560342	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	71790803	71790804	chr7:71790804:T:C	rs6460688	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	71931993	71931994	chr7:71931994:T:C	rs73185100	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	72265589	72265590	chr7:72265590:A:G	rs7782517	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	73770647	73770648	chr7:73770648:G:C	rs534673852	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	73770651	73770652	chr7:73770652:G:T	rs140638298	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	74580403	74580404	chr7:74580404:C:T	rs17145600	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	75033415	75033416	chr7:75033416:C:T	rs1027584017	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr7	75611854	75611855	chr7:75611855:G:A	rs35546766	G	A	N	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	76187352	76187353	chr7:76187353:T:C	rs10235674	T	C	.	Hoxd3.mouse_homeodomain_1	6	1	+	6.439408687090748	3.606457735921047	GGTCATTAGC
chr7	77155116	77155117	chr7:77155117:C:T	rs10246097	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	77332416	77332417	chr7:77332417:T:A	rs11761838	T	A	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	77536569	77536570	chr7:77536570:T:C	rs951573363	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.901879681539695	4.041783237978947	AGCAATTAGG
chr7	77536570	77536571	chr7:77536571:T:C	rs992850885	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.901879681539695	4.913021779626513	AGCAATTAGG
chr7	77986851	77986852	chr7:77986852:T:C	rs13235414	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	77986890	77986891	chr7:77986891:A:G	rs13232467	A	G	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	78084063	78084064	chr7:78084064:T:C	rs28617575	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr7	78226576	78226577	chr7:78226577:G:A	rs13231842	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	78900985	78900986	chr7:78900986:G:A	rs17151635	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	79880888	79880889	chr7:79880889:C:A	rs189958494	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.901879681539695	6.768852619533155	AGCAATTAGG
chr7	80489192	80489193	chr7:80489193:T:A	rs74747245	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	80835280	80835281	chr7:80835281:C:T	rs12671772	C	T	c	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	80877125	80877126	chr7:80877126:G:A	rs114731498	G	A	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	80877166	80877167	chr7:80877167:A:T	rs115613729	A	T	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	80967728	80967729	chr7:80967729:C:T	rs1180941512	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr7	80995373	80995374	chr7:80995374:G:A	rs7777152	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	82336831	82336832	chr7:82336832:A:G	rs2299171	A	G	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.904037796958669	0.06348057254000908	ACCAATTAGC
chr7	82375807	82375808	chr7:82375808:C:G	rs2190237	C	G	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	82382786	82382787	chr7:82382787:A:G	rs75211541	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	84315119	84315120	chr7:84315120:A:G	rs59630020	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	84529271	84529272	chr7:84529272:T:C	rs1014498	T	C	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	84535769	84535770	chr7:84535770:C:T	rs151268468	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr7	84916216	84916217	chr7:84916217:T:C	rs10247311	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr7	84946371	84946372	chr7:84946372:A:G	rs34462522	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.376359977658197	5.387502075745015	GCTAATTAGC
chr7	85055932	85055933	chr7:85055933:C:A	rs10226229	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	85396780	85396781	chr7:85396781:A:T	rs2077770	A	T	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	85791615	85791616	chr7:85791616:T:C	rs149396246	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr7	86813177	86813178	chr7:86813178:G:T	rs10266758	G	T	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	87551361	87551362	chr7:87551362:A:T	rs4728702	A	T	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr7	87600187	87600188	chr7:87600188:G:A	rs34834348	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	87962282	87962283	chr7:87962283:G:C	rs138927920	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	88318485	88318486	chr7:88318486:T:A	rs78827305	T	A	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	88345549	88345550	chr7:88345550:T:G	rs17260027	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	88600726	88600727	chr7:88600727:T:C	rs138213061	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.8337638605482685	-0.006793363870391755	GGCAATTAGG
chr7	89299891	89299892	chr7:89299892:A:G	rs10256617	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	89666456	89666457	chr7:89666457:G:T	rs35885321	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	90195425	90195426	chr7:90195426:C:T	rs6465248	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	90195861	90195862	chr7:90195862:G:A	rs757844	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	90658456	90658457	chr7:90658457:C:A	rs1075012	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.989302180477614	6.305231357163452	GGTAATTAGA
chr7	90764970	90764971	chr7:90764971:C:T	rs17163149	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.6738324588039175	6.732748102975356	GCCAATTAGG
chr7	91125972	91125973	chr7:91125973:T:C	rs76600967	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	91141346	91141347	chr7:91141347:C:T	rs43007	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	92025149	92025150	chr7:92025150:T:G	rs75237609	T	G	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	93012403	93012404	chr7:93012404:A:T	rs79401725	A	T	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	93187039	93187040	chr7:93187040:A:T	rs892396572	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr7	94087972	94087973	chr7:94087973:C:T	rs10249590	C	T	T	Hoxd3.mouse_homeodomain_1	3	1	+	6.279477285346397	5.286862645827619	GCTCATTAGC
chr7	94434602	94434603	chr7:94434603:C:T	rs11979919	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	95583102	95583103	chr7:95583103:T:C	rs11763823	T	C	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	95583107	95583108	chr7:95583108:T:G	rs11763824	T	G	G	Hoxd3.mouse_homeodomain_1	2	1	+	6.277319169927424	2.3702241118264893	GGTCATTAGG
chr7	95621493	95621494	chr7:95621494:A:C	rs970626	A	C	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr7	95916937	95916938	chr7:95916938:A:G	rs10243540	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	96238797	96238798	chr7:96238798:C:A	rs7812151	C	A	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	96596313	96596314	chr7:96596314:A:G	rs6949227	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr7	96832221	96832222	chr7:96832222:G:C	rs1947227	G	C	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	97139459	97139460	chr7:97139460:A:T	rs6963921	A	T	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	97870097	97870098	chr7:97870098:A:C	rs17345759	A	C	.	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	98282305	98282306	chr7:98282306:G:A	rs111849767	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	98382729	98382730	chr7:98382730:C:T	rs184173018	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr7	99380144	99380145	chr7:99380145:T:G	rs1182084248	T	G	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	99562653	99562654	chr7:99562654:G:A	rs1022700307	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.595207023573987	7.663322844565413	GGTAATTAAC
chr7	99631774	99631775	chr7:99631775:C:A	rs527486276	C	A	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	100949086	100949087	chr7:100949087:C:G	rs79487531	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.663322844565413	7.503391442821062	AGTAATTAAC
chr7	101134583	101134584	chr7:101134584:G:T	chr7:101134584:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	101411526	101411527	chr7:101411527:G:A	chr7:101411527:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	101618649	101618650	chr7:101618650:C:T	rs4727502	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	101718076	101718077	chr7:101718077:T:C	rs371512486	T	C	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr7	101927802	101927803	chr7:101927803:C:T	rs2906648	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.595207023573987	7.300090444404122	GGTAATTAAC
chr7	102098344	102098345	chr7:102098345:T:C	rs201461	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	102418694	102418695	chr7:102418695:C:G	rs4729788	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	102432156	102432157	chr7:102432157:A:G	rs13226125	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	103396039	103396040	chr7:103396040:C:T	rs35650730	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.300090444404122	6.632369677700721	GGTAATTAAT
chr7	103718472	103718473	chr7:103718473:C:A	rs2299371	C	A	C	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	7.501233327402089	AGTAATTACG
chr7	103933310	103933311	chr7:103933311:C:G	rs12533834	C	G	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	103949453	103949454	chr7:103949454:A:G	rs35662900	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	104318557	104318558	chr7:104318558:G:A	rs4281047	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	104368084	104368085	chr7:104368085:T:C	rs4383914	T	C	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	104772906	104772907	chr7:104772907:G:A	rs73713436	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr7	105150059	105150060	chr7:105150060:A:C	rs117200858	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	105715952	105715953	chr7:105715953:C:A	rs601781	C	A	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	105736303	105736304	chr7:105736304:C:T	rs672416	C	T	c	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr7	105938519	105938520	chr7:105938520:G:T	rs193854	G	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	105938522	105938523	chr7:105938523:G:A	rs10267043	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.435275621829636	7.503391442821062	GCTAATTAAC
chr7	106258027	106258028	chr7:106258028:T:C	rs3801269	T	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	106420940	106420941	chr7:106420941:G:A	rs73723441	G	A	g	Hoxd3.mouse_homeodomain_1	1	1	-	6.466705306321288	5.942565884751477	CCCAATTAGC
chr7	106717460	106717461	chr7:106717461:G:T	chr7:106717461:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	106773290	106773291	chr7:106773291:C:T	rs139742386	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	107318780	107318781	chr7:107318781:A:C	rs12532849	A	C	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	107726671	107726672	chr7:107726672:C:T	chr7:107726672:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.536291379402548	7.595207023573987	GGTAATTAGC
chr7	108227436	108227437	chr7:108227437:T:G	rs117057674	T	G	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	108299792	108299793	chr7:108299793:G:A	rs114173573	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	108427968	108427969	chr7:108427969:T:C	rs4730319	T	C	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	108486259	108486260	chr7:108486260:G:C	rs17155828	G	C	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	108723442	108723443	chr7:108723443:A:G	rs12538120	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr7	108863453	108863454	chr7:108863454:T:G	rs55944220	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.376359977658197	3.469264919557263	GCTAATTAGC
chr7	109222080	109222081	chr7:109222081:C:G	rs10251450	C	G	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	109520497	109520498	chr7:109520498:A:T	rs62471109	A	T	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.732748102975356	2.9560489811582875	GCCAATTAAG
chr7	109891000	109891001	chr7:109891001:T:C	rs60394411	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.663322844565413	7.604407200393974	AGTAATTAAC
chr7	110517196	110517197	chr7:110517197:T:C	rs6960599	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	110919266	110919267	chr7:110919267:T:A	rs112702862	T	A	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	110946070	110946071	chr7:110946071:G:C	rs725272	G	C	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	111030057	111030058	chr7:111030058:G:A	rs10953673	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr7	111034846	111034847	chr7:111034847:A:C	rs28505381	A	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	111486468	111486469	chr7:111486469:C:T	rs575241163	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	111736626	111736627	chr7:111736627:C:T	rs9691349	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	111996519	111996520	chr7:111996520:T:C	rs10248098	T	C	C	Hoxd3.mouse_homeodomain_1	6	1	+	6.678572715728777	3.845621764559075	AGCAATTACC
chr7	112204655	112204656	chr7:112204656:A:G	rs73422510	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr7	112455566	112455567	chr7:112455567:C:G	rs3109112	C	G	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	112994983	112994984	chr7:112994984:G:A	rs117482171	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	113677652	113677653	chr7:113677653:T:C	rs12705891	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	114359167	114359168	chr7:114359168:T:C	rs2690836	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.962953441130107	0.12239621671144799	ACCAATTAAC
chr7	114645666	114645667	chr7:114645667:A:G	chr7:114645667:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr7	115011875	115011876	chr7:115011876:C:T	rs12667516	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	115097549	115097550	chr7:115097550:C:T	rs71573127	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	115464363	115464364	chr7:115464364:T:A	rs531774804	T	A	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	116084164	116084165	chr7:116084165:C:A	rs1306234148	C	A	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	116277125	116277126	chr7:116277126:T:C	rs1819050	T	C	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr7	116320899	116320900	chr7:116320900:G:A	rs61557382	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	116937069	116937070	chr7:116937070:G:A	rs7782376	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr7	117722112	117722113	chr7:117722113:C:T	rs17550567	C	T	c	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	117722113	117722114	chr7:117722114:G:A	rs1010500111	G	A	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	117993558	117993559	chr7:117993559:C:T	rs1439516001	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	117993571	117993572	chr7:117993572:A:G	rs576058382	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	117993573	117993574	chr7:117993574:G:A	chr7:117993574:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr7	117993584	117993585	chr7:117993585:G:T	rs1468109272	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.741948279795344	6.234158914836294	ACCAATTAGG
chr7	117993593	117993594	chr7:117993594:T:C	rs149365939	T	C	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	118121616	118121617	chr7:118121617:G:A	rs2402303	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr7	118477217	118477218	chr7:118477218:A:G	rs147445546	A	G	G	Hoxd3.mouse_homeodomain_1	5	1	-	6.835921975967242	-0.0046352484514174674	GCCAATTAGC
chr7	118664338	118664339	chr7:118664339:G:T	rs13232398	G	T	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr7	118664358	118664359	chr7:118664359:A:G	rs11763035	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.433117506410662	6.892679504719707	GGTAATTAAG
chr7	120070300	120070301	chr7:120070301:A:G	rs13438543	A	G	g	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr7	120527261	120527262	chr7:120527262:C:T	rs10488301	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	121528994	121528995	chr7:121528995:A:G	rs7795140	A	G	a	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	121939867	121939868	chr7:121939868:G:A	rs6948149	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	122585542	122585543	chr7:122585543:T:C	rs7791524	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr7	123527961	123527962	chr7:123527962:G:T	rs7791541	G	T	g	Hoxd3.mouse_homeodomain_1	8	1	+	7.0639691987030195	6.328799166028848	AGCAATTAGC
chr7	124101452	124101453	chr7:124101453:C:T	rs10226901	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	124422664	124422665	chr7:124422665:C:T	rs6980458	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	125327555	125327556	chr7:125327556:T:C	rs34387420	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	125392145	125392146	chr7:125392146:C:T	rs7784402	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr7	127507042	127507043	chr7:127507043:T:A	rs17714259	T	A	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	127682559	127682560	chr7:127682560:C:T	rs712707	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	127958005	127958006	chr7:127958006:C:T	rs35774036	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr7	128076331	128076332	chr7:128076332:C:T	rs111643814	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	7.2190107174197315	6.8692371677198025	AGTAATTACC
chr7	128085398	128085399	chr7:128085399:T:G	rs116566152	T	G	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	128100055	128100056	chr7:128100056:C:T	rs73239706	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	128137084	128137085	chr7:128137085:A:G	rs322750	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr7	128507064	128507065	chr7:128507065:T:C	rs7806863	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr7	128818594	128818595	chr7:128818595:C:A	rs4731517	C	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	128940313	128940314	chr7:128940314:C:T	rs966776078	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	129061276	129061277	chr7:129061277:T:C	rs13246321	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	129362765	129362766	chr7:129362766:A:G	rs75954998	A	G	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr7	129525582	129525583	chr7:129525583:G:A	rs610526	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	129851370	129851371	chr7:129851371:C:G	rs151214659	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	130497730	130497731	chr7:130497731:G:A	rs35416015	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr7	130910287	130910288	chr7:130910288:A:G	rs205763	A	G	G	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr7	131011960	131011961	chr7:131011961:C:T	rs1588769	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.214270460494872	7.282386281486299	GCTAATTAGG
chr7	131069303	131069304	chr7:131069304:G:C	rs148792817	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	131250649	131250650	chr7:131250650:A:T	rs7791813	A	T	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr7	131383402	131383403	chr7:131383403:A:G	rs3847105	A	G	G	Hoxd3.mouse_homeodomain_1	4	1	+	6.525620950492726	3.6655245069319795	CCCAATTAAC
chr7	131722713	131722714	chr7:131722714:C:T	rs12540278	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr7	132513281	132513282	chr7:132513282:T:C	rs156971	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr7	132625944	132625945	chr7:132625945:T:C	rs67782645	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.501233327402089	6.960795325711134	AGTAATTAAG
chr7	133575930	133575931	chr7:133575931:T:C	rs10954419	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr7	133957805	133957806	chr7:133957806:A:G	rs2971966	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr7	133957841	133957842	chr7:133957842:A:G	rs2971967	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	133957845	133957846	chr7:133957846:C:A	rs2971968	C	A	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	134740801	134740802	chr7:134740802:C:T	rs62462507	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	134778396	134778397	chr7:134778397:A:C	rs3807334	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	135168332	135168333	chr7:135168333:A:C	rs73153794	A	C	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	135261246	135261247	chr7:135261247:C:T	rs1646885	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr7	135261247	135261248	chr7:135261248:T:G	rs1618426	T	G	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr7	135774466	135774467	chr7:135774467:G:A	rs36019693	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	135784713	135784714	chr7:135784714:G:A	rs6977424	G	A	g	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	135856064	135856065	chr7:135856065:C:T	rs902865595	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr7	136422489	136422490	chr7:136422490:T:G	rs6961655	T	G	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr7	137238982	137238983	chr7:137238983:T:C	rs891586	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr7	138321166	138321167	chr7:138321167:A:C	rs73159911	A	C	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	138608897	138608898	chr7:138608898:A:G	rs1659824	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	138665354	138665355	chr7:138665355:G:T	rs13308573	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	138755360	138755361	chr7:138755361:C:T	rs148521881	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.732748102975356	6.800863923966783	GCCAATTAAG
chr7	139582862	139582863	chr7:139582863:C:T	rs80060909	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	139683647	139683648	chr7:139683648:C:T	rs79989887	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr7	140512849	140512850	chr7:140512850:A:T	rs79177493	A	T	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr7	140512885	140512886	chr7:140512886:C:G	rs76378882	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	141430545	141430546	chr7:141430546:C:G	rs1181735	C	G	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	141431131	141431132	chr7:141431132:G:A	rs1181736	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr7	141463190	141463191	chr7:141463191:C:T	rs145972328	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr7	142011098	142011099	chr7:142011099:T:C	rs1527307	T	C	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	142610635	142610636	chr7:142610636:C:A	rs56826725	C	A	A	Hoxd3.mouse_homeodomain_1	2	1	+	6.700736798541729	4.897702857577955	GGCAATTAGT
chr7	142845163	142845164	chr7:142845164:A:G	rs11761928	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	143008318	143008319	chr7:143008319:C:T	chr7:143008319:C:T	C	T	c	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr7	143008328	143008329	chr7:143008329:T:C	rs13438029	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr7	145082815	145082816	chr7:145082816:G:A	rs118114357	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	146073285	146073286	chr7:146073286:A:T	rs12703761	A	T	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	146355521	146355522	chr7:146355522:G:A	rs148636248	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.220683642931706	5.552962876228305	GGTAATGAGC
chr7	147196887	147196888	chr7:147196888:A:G	rs10279761	A	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr7	147326069	147326070	chr7:147326070:A:C	rs36029041	A	C	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr7	147335455	147335456	chr7:147335456:G:C	rs747140	G	C	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr7	147944627	147944628	chr7:147944628:T:G	rs2707580	T	G	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr7	148303725	148303726	chr7:148303726:G:A	rs1104852	G	A	-	Hoxd3.mouse_homeodomain_1	0	1	-	6.304615789157963	6.144808287315873	CCCAATTAGG
chr7	148527751	148527752	chr7:148527752:C:A	rs548223655	C	A	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.279477285346397	5.544307252672225	GCTCATTAGC
chr7	148590927	148590928	chr7:148590928:G:T	rs62624492	G	T	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr7	148630390	148630391	chr7:148630391:T:C	rs713591	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.604407200393974	7.536291379402548	AGTAATTAGC
chr7	148640058	148640059	chr7:148640059:G:A	rs11763142	G	A	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr7	150326309	150326310	chr7:150326310:C:G	rs540643190	C	G	c	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr7	150377470	150377471	chr7:150377471:G:A	rs2108850	G	A	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr7	150788685	150788686	chr7:150788686:C:T	rs367603692	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	150799348	150799349	chr7:150799349:G:C	rs7781814	G	C	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr7	150877724	150877725	chr7:150877725:G:A	rs60649624	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	5.898970685399792	5.967086506391219	GGCCATTAGC
chr7	151100493	151100494	chr7:151100494:G:A	rs1978655	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	151426820	151426821	chr7:151426821:C:G	rs73476424	C	G	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.466705306321288	6.304615789157963	CCCAATTAGC
chr7	151426834	151426835	chr7:151426835:C:T	rs886311072	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr7	151650375	151650376	chr7:151650376:A:C	rs2727527	A	C	-	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr7	152863861	152863862	chr7:152863862:C:T	rs7787344	C	T	-	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr7	153458076	153458077	chr7:153458077:T:C	rs7782578	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr7	154055986	154055987	chr7:154055987:C:T	rs2533720	C	T	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	154424602	154424603	chr7:154424603:A:C	rs73726870	A	C	a	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	154620197	154620198	chr7:154620198:T:C	rs4960608	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	154759312	154759313	chr7:154759313:T:C	rs142893393	T	C	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	155295363	155295364	chr7:155295364:T:A	rs34369781	T	A	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	155326137	155326138	chr7:155326138:G:C	rs757102584	G	C	-	Hoxd3.mouse_homeodomain_1	9	1	+	6.901879681539695	7.0639691987030195	AGCAATTAGG
chr7	155326466	155326467	chr7:155326467:G:A	rs36148308	G	A	-	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	155484330	155484331	chr7:155484331:C:T	rs6942469	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	155824850	155824851	chr7:155824851:G:A	rs11576047	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.004985192593269	7.063900836764708	CGTAATTAGG
chr7	155830770	155830771	chr7:155830771:A:G	rs288755	A	G	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr7	155924873	155924874	chr7:155924874:G:A	rs58181134	G	A	g	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	155924898	155924899	chr7:155924899:G:T	rs10227233	G	T	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr7	156003996	156003997	chr7:156003997:C:G	rs58786153	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr7	156004005	156004006	chr7:156004006:G:A	rs73173097	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr7	156028130	156028131	chr7:156028131:C:T	rs4716580	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr7	156177730	156177731	chr7:156177731:A:C	rs55868260	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	156960686	156960687	chr7:156960687:T:C	rs2079985	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr7	157152240	157152241	chr7:157152241:G:A	rs74671488	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	157158484	157158485	chr7:157158485:G:C	rs17645539	G	C	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr7	157340312	157340313	chr7:157340313:T:G	chr7:157340313:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	157340320	157340321	chr7:157340321:G:A	chr7:157340321:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	157769340	157769341	chr7:157769341:G:A	rs79840735	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	158015824	158015825	chr7:158015825:G:C	rs897460920	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.501233327402089	7.341301925657738	AGTAATTAAG
chr7	158021522	158021523	chr7:158021523:C:T	rs2043498	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	158023437	158023438	chr7:158023438:G:A	rs4716880	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.595207023573987	7.663322844565413	GGTAATTAAC
chr7	158063871	158063872	chr7:158063872:A:G	rs73171559	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	158761394	158761395	chr7:158761395:C:T	rs112709510	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr7	158816177	158816178	chr7:158816178:A:C	rs555280922	A	C	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	159191597	159191598	chr7:159191598:G:A	rs378441	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr8	343220	343221	chr8:343221:T:C	rs2023410	T	C	.	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	614881	614882	chr8:614882:G:C	rs959245	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.6738324588039175	6.304615789157963	GCCAATTAGG
chr8	614882	614883	chr8:614883:C:A	rs906888	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.6738324588039175	6.166043093844867	GCCAATTAGG
chr8	655347	655348	chr8:655348:C:T	rs112496502	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	655360	655361	chr8:655361:T:C	rs113381654	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr8	1025168	1025169	chr8:1025169:T:C	rs12546702	T	C	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr8	1139661	1139662	chr8:1139662:C:T	rs563752933	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr8	1166278	1166279	chr8:1166279:A:G	rs7823761	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	1183354	1183355	chr8:1183355:C:T	rs12334702	C	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr8	1214909	1214910	chr8:1214910:T:G	rs11996586	T	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	1214916	1214917	chr8:1214917:C:G	rs34086587	C	G	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	1261769	1261770	chr8:1261770:T:A	rs565779807	T	A	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	1267431	1267432	chr8:1267432:G:T	rs146212999	G	T	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr8	1267458	1267459	chr8:1267459:G:T	rs13281633	G	T	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.466705306321288	4.663671365357515	CCCAATTAGC
chr8	1302003	1302004	chr8:1302004:A:G	rs17754335	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr8	1497611	1497612	chr8:1497612:A:G	rs10093255	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.536291379402548	5.547433477489366	GGTAATTAGC
chr8	1497616	1497617	chr8:1497617:G:A	rs57909933	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.536291379402548	7.595207023573987	GGTAATTAGC
chr8	2093638	2093639	chr8:2093639:G:A	rs4559266	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	7.273186104666311	6.888286422904701	GCTAATTAAG
chr8	2138505	2138506	chr8:2138506:A:C	rs3779817	A	C	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	2157690	2157691	chr8:2157691:A:C	rs12543116	A	C	a	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	2360948	2360949	chr8:2360949:G:A	rs74627283	G	A	-	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	2526499	2526500	chr8:2526500:G:C	rs187771256	G	C	G	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	2666711	2666712	chr8:2666712:T:G	chr8:2666712:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr8	2979187	2979188	chr8:2979188:C:G	rs687026	C	G	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr8	3474193	3474194	chr8:3474194:T:C	rs10112704	T	C	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	3780524	3780525	chr8:3780525:C:T	rs10503217	C	T	T	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	3938656	3938657	chr8:3938657:G:A	rs115667728	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr8	4123318	4123319	chr8:4123319:A:G	rs28660289	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	4123326	4123327	chr8:4123327:G:T	rs2194605	G	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	6.540805396797378	6.011781225309333	GCCAATTAGT
chr8	4326437	4326438	chr8:4326438:A:T	rs9314525	A	T	A	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr8	4358739	4358740	chr8:4358740:G:C	rs10096474	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	4665878	4665879	chr8:4665879:C:G	rs2724963	C	G	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	4779758	4779759	chr8:4779759:C:A	rs564417016	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.6266367080656385	5.942565884751477	CGCAATTAGC
chr8	4779759	4779760	chr8:4779760:G:C	rs10081537	G	C	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.6266367080656385	6.995853377711593	CGCAATTAGC
chr8	4838416	4838417	chr8:4838417:G:C	rs10100062	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.433117506410662	7.273186104666311	GGTAATTAAG
chr8	5066665	5066666	chr8:5066666:G:A	rs7824340	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	5131143	5131144	chr8:5131144:C:A	rs17351076	C	A	C	Hoxd3.mouse_homeodomain_1	6	1	-	6.220683642931706	7.536291379402548	GGTAATGAGC
chr8	5798687	5798688	chr8:5798688:C:G	rs7833375	C	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	5803373	5803374	chr8:5803374:C:T	rs1355664	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	5874418	5874419	chr8:5874419:A:G	rs7013610	A	G	a	Hoxd3.mouse_homeodomain_1	3	1	+	6.450525492992999	4.4616675910798165	GCCAATTACC
chr8	5970115	5970116	chr8:5970116:A:G	rs139522358	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr8	6110606	6110607	chr8:6110607:G:A	rs11775110	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	6554743	6554744	chr8:6554744:G:C	rs2515499	G	C	G	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	6864824	6864825	chr8:6864825:C:T	rs2741106	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr8	7026968	7026969	chr8:7026969:A:G	rs151313168	A	G	.	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	8181092	8181093	chr8:8181093:C:A	rs866908201	C	A	.	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr8	8284471	8284472	chr8:8284472:G:C	rs74808779	G	C	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.241174800232684	7.081243398488333	GGTAATTAGT
chr8	8333272	8333273	chr8:8333273:T:C	rs2980496	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	8443901	8443902	chr8:8443902:A:G	rs2921080	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	-	7.007267207914503	7.167074709756593	TGTAATTAGC
chr8	8503743	8503744	chr8:8503744:A:G	rs2980754	A	G	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr8	8837128	8837129	chr8:8837129:A:G	chr8:8837129:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	9229653	9229654	chr8:9229654:T:A	rs73199639	T	A	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	9230769	9230770	chr8:9230770:G:T	rs330053	G	T	G	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	9230780	9230781	chr8:9230781:G:A	rs330054	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	9518433	9518434	chr8:9518434:C:T	rs17733293	C	T	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	10131398	10131399	chr8:10131399:G:C	rs4841283	G	C	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	10253783	10253784	chr8:10253784:G:A	rs6983870	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr8	11019747	11019748	chr8:11019748:C:A	rs35315747	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr8	11125468	11125469	chr8:11125469:C:G	rs76469923	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	11197595	11197596	chr8:11197596:G:C	rs76103688	G	C	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	11420050	11420051	chr8:11420051:T:A	rs6982763	T	A	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr8	11429045	11429046	chr8:11429046:C:T	rs36038555	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr8	11493168	11493169	chr8:11493169:T:C	rs2736344	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	11713417	11713418	chr8:11713418:G:A	rs191225754	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.61045689473735	7.150894896428305	GGCAATTACC
chr8	11778436	11778437	chr8:11778437:T:C	rs4840583	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	11824315	11824316	chr8:11824316:C:T	rs17756892	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	11824328	11824329	chr8:11824329:T:C	rs17149412	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	11877108	11877109	chr8:11877109:T:C	rs1619003	T	C	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.732748102975356	6.6738324588039175	GCCAATTAAG
chr8	12916700	12916701	chr8:12916701:C:G	rs2977127	C	G	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr8	12939788	12939789	chr8:12939789:G:A	rs6531011	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr8	13043534	13043535	chr8:13043535:G:C	rs1474141	G	C	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	13080363	13080364	chr8:13080364:A:G	rs57889625	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	13157102	13157103	chr8:13157103:A:C	rs4831888	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr8	13248865	13248866	chr8:13248866:T:C	rs7834975	T	C	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr8	13731678	13731679	chr8:13731679:T:C	rs73663974	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	14227960	14227961	chr8:14227961:C:G	rs12675362	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	14227979	14227980	chr8:14227980:T:C	rs35482427	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	14227980	14227981	chr8:14227981:G:A	rs34899486	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	14277280	14277281	chr8:14277281:T:C	rs7825535	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	14557661	14557662	chr8:14557662:C:A	rs1848884	C	A	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	14712928	14712929	chr8:14712929:G:A	rs34835594	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr8	14997583	14997584	chr8:14997584:T:C	rs13278622	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	15422749	15422750	chr8:15422750:G:C	rs7843321	G	C	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	15457526	15457527	chr8:15457527:G:T	rs13273177	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	15537969	15537970	chr8:15537970:G:A	rs7830920	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	15994793	15994794	chr8:15994794:A:G	rs73200464	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr8	16200029	16200030	chr8:16200030:C:T	rs59251421	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr8	16248994	16248995	chr8:16248995:A:T	rs6530948	A	T	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	16407967	16407968	chr8:16407968:G:A	rs79161500	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr8	17028032	17028033	chr8:17028033:A:G	rs74614084	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.439408687090748	3.606457735921047	GGTCATTAGC
chr8	17379960	17379961	chr8:17379961:A:C	rs10088936	A	C	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	17382928	17382929	chr8:17382929:C:T	rs6587039	C	T	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr8	17473013	17473014	chr8:17473014:C:T	rs2588240	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	17615179	17615180	chr8:17615180:A:G	rs3780105	A	G	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	17619334	17619335	chr8:17619335:A:G	rs2237832	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.300090444404122	6.7596524427131675	GGTAATTAAT
chr8	17663223	17663224	chr8:17663224:G:C	rs952636604	G	C	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	17663247	17663248	chr8:17663248:T:A	rs12676230	T	A	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	17754533	17754534	chr8:17754534:G:A	rs61733694	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr8	17771094	17771095	chr8:17771095:C:T	rs62498366	C	T	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr8	18054312	18054313	chr8:18054313:C:A	rs543449	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr8	18054328	18054329	chr8:18054329:A:T	rs483159	A	T	A	Hoxd3.mouse_homeodomain_1	5	1	-	6.439408687090748	2.66270956527368	GGTCATTAGC
chr8	18320626	18320627	chr8:18320627:G:A	rs117688508	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.989302180477614	7.05741800146904	GGTAATTAGA
chr8	18359499	18359500	chr8:18359500:C:T	rs79354281	C	T	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr8	18647339	18647340	chr8:18647340:A:T	rs7822186	A	T	A	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	18647342	18647343	chr8:18647343:T:G	rs11775173	T	G	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	18731400	18731401	chr8:18731401:A:G	rs17127110	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	18988522	18988523	chr8:18988523:T:C	rs2898483	T	C	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr8	19003896	19003897	chr8:19003897:G:A	rs79514962	G	A	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.282386281486299	7.341301925657738	ACTAATTAGG
chr8	19003906	19003907	chr8:19003907:G:A	rs79221754	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	19041830	19041831	chr8:19041831:T:C	rs114563303	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.960795325711134	4.100698882150386	AGCAATTAAG
chr8	19106280	19106281	chr8:19106281:A:G	rs73668627	A	G	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.279477285346397	2.122917884009787	GCTCATTAGC
chr8	19134772	19134773	chr8:19134773:T:C	rs73593609	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	19134779	19134780	chr8:19134780:C:A	rs114726056	C	A	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr8	19135964	19135965	chr8:19135965:C:A	rs374739122	C	A	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr8	19228842	19228843	chr8:19228843:C:T	rs1118972	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr8	19278393	19278394	chr8:19278394:C:T	rs79145632	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	20198647	20198648	chr8:20198648:C:T	rs187071273	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	20552181	20552182	chr8:20552182:T:G	rs78293317	T	G	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	21059524	21059525	chr8:21059525:C:T	rs111970678	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	7.167074709756593	7.007267207914503	CGTAATTAGC
chr8	21068287	21068288	chr8:21068288:C:T	rs556446288	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.2190107174197315	6.551289950716331	AGTAATTACC
chr8	21068289	21068290	chr8:21068290:C:T	rs13275050	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	21288811	21288812	chr8:21288812:T:C	rs1841195	T	C	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	21364640	21364641	chr8:21364641:A:G	rs6586982	A	G	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	21492549	21492550	chr8:21492550:C:T	rs925543342	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.448367377574026	6.0985938278740965	GGCAATTACG
chr8	21534452	21534453	chr8:21534453:C:T	rs1600687	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr8	21555539	21555540	chr8:21555540:G:A	rs191442635	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.450525492992999	5.926386071423187	GCCAATTACC
chr8	21562773	21562774	chr8:21562774:C:T	rs78977335	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	6.304615789157963	5.919716107396353	CCCAATTAGG
chr8	21665999	21666000	chr8:21666000:G:T	rs143060781	G	T	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	21801318	21801319	chr8:21801319:A:G	rs77760613	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr8	21801320	21801321	chr8:21801321:A:G	rs111669090	A	G	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	21884795	21884796	chr8:21884796:T:C	rs67083652	T	C	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	22185098	22185099	chr8:22185099:A:C	rs73670371	A	C	A	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr8	22443609	22443610	chr8:22443610:A:G	rs11992035	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr8	22561542	22561543	chr8:22561543:G:A	rs113637100	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.595207023573987	7.663322844565413	GGTAATTAAC
chr8	23177377	23177378	chr8:23177378:A:G	chr8:23177378:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	23410299	23410300	chr8:23410300:T:C	rs142638625	T	C	T	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr8	23753242	23753243	chr8:23753243:C:T	rs310289	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	23753285	23753286	chr8:23753286:T:G	rs1561105	T	G	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr8	24928312	24928313	chr8:24928313:C:A	rs74320172	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	25392409	25392410	chr8:25392410:C:T	rs2709644	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr8	25583675	25583676	chr8:25583676:T:C	rs60818845	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	25737748	25737749	chr8:25737749:T:C	rs1425726	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	25924484	25924485	chr8:25924485:G:A	rs6557870	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr8	26048045	26048046	chr8:26048046:T:C	rs78278087	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	26078119	26078120	chr8:26078120:G:A	rs11135916	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	26168006	26168007	chr8:26168007:A:G	rs2952019	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	26235071	26235072	chr8:26235072:T:C	rs2704065	T	C	C	Hoxd3.mouse_homeodomain_1	0	1	-	6.901879681539695	6.8337638605482685	AGCAATTAGG
chr8	26423168	26423169	chr8:26423169:C:T	rs35892365	C	T	C	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr8	26663117	26663118	chr8:26663118:C:T	rs6557935	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	26806110	26806111	chr8:26806111:G:C	rs73231557	G	C	g	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	26931432	26931433	chr8:26931433:A:T	rs7007414	A	T	T	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	26931443	26931444	chr8:26931444:G:A	rs6986602	G	A	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr8	27274418	27274419	chr8:27274419:A:C	rs140103307	A	C	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	27909653	27909654	chr8:27909654:G:A	rs2726991	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.220683642931706	5.925567063761842	GGTAATGAGC
chr8	27969384	27969385	chr8:27969385:T:C	rs2726934	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	28434934	28434935	chr8:28434935:G:T	rs6558058	G	T	g	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	28445269	28445270	chr8:28445270:G:C	rs1060409	G	C	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr8	28445280	28445281	chr8:28445281:G:A	rs1978678	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	28709159	28709160	chr8:28709160:A:G	rs2299563	A	G	A	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	29211802	29211803	chr8:29211803:C:A	rs56338636	C	A	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.0639691987030195	6.379898375388858	AGCAATTAGC
chr8	29390893	29390894	chr8:29390894:C:T	rs10503839	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr8	29486908	29486909	chr8:29486909:G:A	rs11136072	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	29486944	29486945	chr8:29486945:A:G	rs12548021	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	29565792	29565793	chr8:29565793:G:A	rs4403447	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.241240225091396	5.946123645921531	CGCAATTACC
chr8	29611344	29611345	chr8:29611345:C:T	rs79802815	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	29750828	29750829	chr8:29750829:C:T	rs115994476	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	6.707147650556478	AGTAATTACG
chr8	30005834	30005835	chr8:30005835:C:G	rs115800805	C	G	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr8	30137269	30137270	chr8:30137270:A:G	rs188534729	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr8	30528467	30528468	chr8:30528468:A:G	rs77679867	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	30717891	30717892	chr8:30717892:G:A	rs149571864	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr8	30913250	30913251	chr8:30913251:G:A	rs6651142	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr8	32494026	32494027	chr8:32494027:G:C	rs16879481	G	C	G	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	32678638	32678639	chr8:32678639:A:C	rs978789482	A	C	A	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	33203893	33203894	chr8:33203894:A:G	rs10092532	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr8	33226339	33226340	chr8:33226340:A:G	rs1008059558	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr8	33413268	33413269	chr8:33413269:C:T	rs55883200	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr8	33445974	33445975	chr8:33445975:A:G	rs6995454	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	33589505	33589506	chr8:33589506:G:A	rs77036623	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	34665607	34665608	chr8:34665608:T:C	rs6985959	T	C	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr8	36773554	36773555	chr8:36773555:G:C	rs144476525	G	C	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	36873806	36873807	chr8:36873807:A:G	rs183445800	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	36884040	36884041	chr8:36884041:C:T	rs10099214	C	T	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	37180144	37180145	chr8:37180145:G:A	rs73591184	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.2190107174197315	6.551289950716331	AGTAATTACC
chr8	37275027	37275028	chr8:37275028:G:A	rs391449	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	37375625	37375626	chr8:37375626:T:C	rs2697879	T	C	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	37389075	37389076	chr8:37389076:G:A	rs376082	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.901879681539695	6.516979999778085	AGCAATTAGG
chr8	37392192	37392193	chr8:37392193:C:T	rs369945	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr8	37452525	37452526	chr8:37452526:A:G	rs78932743	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	37814091	37814092	chr8:37814092:G:A	rs35545278	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	38170676	38170677	chr8:38170677:G:A	rs7823144	G	A	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	38465873	38465874	chr8:38465874:T:A	rs377593474	T	A	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr8	38878128	38878129	chr8:38878129:G:A	rs573298574	G	A	G	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr8	38901234	38901235	chr8:38901235:A:T	chr8:38901235:A:T	A	T	a	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	39026656	39026657	chr8:39026657:T:C	rs6985673	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.44231768323065	7.374201862239223	AGTAATTAGG
chr8	39329793	39329794	chr8:39329794:T:C	rs79004878	T	C	.	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	39886976	39886977	chr8:39886977:C:T	rs1421216	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.374201862239223	6.706481095535822	GGTAATTAGG
chr8	39996919	39996920	chr8:39996920:G:T	rs62511373	G	T	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	40041057	40041058	chr8:40041058:C:T	rs138774469	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	6.8337638605482685	6.892679504719707	GGCAATTAGG
chr8	40185551	40185552	chr8:40185552:G:A	rs6985919	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr8	40196195	40196196	chr8:40196196:C:G	rs188221448	C	G	C	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr8	40514943	40514944	chr8:40514944:A:C	rs1429956	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	40694095	40694096	chr8:40694096:C:A	rs57496181	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	40828730	40828731	chr8:40828731:G:C	rs35019884	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.700736798541729	6.315340315567486	GGCAATTAGT
chr8	40888536	40888537	chr8:40888537:G:A	rs116957037	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	40977900	40977901	chr8:40977901:A:G	rs1355591	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr8	40993371	40993372	chr8:40993372:A:G	rs61585002	A	G	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr8	41430400	41430401	chr8:41430401:C:T	rs55923837	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	41476800	41476801	chr8:41476801:C:A	rs7813789	C	A	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	41809355	41809356	chr8:41809356:T:C	rs10090395	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	42140854	42140855	chr8:42140855:A:G	rs10094225	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.220683642931706	5.680245641240751	GGTAATGAGC
chr8	42140876	42140877	chr8:42140877:C:T	rs7833037	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	42483388	42483389	chr8:42483389:T:C	rs7817540	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	7.503391442821062	0.6628342184024029	ACTAATTAAC
chr8	42501328	42501329	chr8:42501329:A:G	rs79802807	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	47498260	47498261	chr8:47498261:C:T	rs73565276	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	48583593	48583594	chr8:48583594:G:A	rs13250857	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	48659496	48659497	chr8:48659497:C:A	rs549064374	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	49367976	49367977	chr8:49367977:A:G	rs6989207	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	50643382	50643383	chr8:50643383:G:C	rs11991963	G	C	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	50886660	50886661	chr8:50886661:G:A	rs6982493	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr8	51663394	51663395	chr8:51663395:A:T	rs13265125	A	T	a	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	51882346	51882347	chr8:51882347:G:A	rs10958303	G	A	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	53361539	53361540	chr8:53361540:C:T	rs7001769	C	T	T	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	53537334	53537335	chr8:53537335:T:G	rs16922709	T	G	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr8	53884641	53884642	chr8:53884642:A:G	rs77006324	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr8	54338525	54338526	chr8:54338526:T:G	rs12675259	T	G	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr8	54467788	54467789	chr8:54467789:T:C	rs551382520	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	54971675	54971676	chr8:54971676:C:G	rs11780917	C	G	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	55843508	55843509	chr8:55843509:G:C	rs114505662	G	C	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	55988956	55988957	chr8:55988957:G:A	rs17756527	G	A	g	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	56040427	56040428	chr8:56040428:A:G	rs2667996	A	G	A	Hoxd3.mouse_homeodomain_1	8	1	+	6.732748102975356	6.6738324588039175	GCCAATTAAG
chr8	56605013	56605014	chr8:56605014:A:G	rs80096833	A	G	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	57465560	57465561	chr8:57465561:T:C	rs55706599	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	57519395	57519396	chr8:57519396:G:T	rs59467808	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	57529464	57529465	chr8:57529465:C:G	rs2053898	C	G	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.056921200256407	7.2190107174197315	AGTAATTACG
chr8	57743286	57743287	chr8:57743287:T:G	rs13255034	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	6.678572715728777	2.838073539176709	AGCAATTACC
chr8	58040568	58040569	chr8:58040569:A:G	rs60265023	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	58070392	58070393	chr8:58070393:T:C	rs58104827	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	7.2190107174197315	5.23015281550655	AGTAATTACC
chr8	58309886	58309887	chr8:58309887:T:C	rs12679607	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	58335725	58335726	chr8:58335726:T:C	rs2326011	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.8337638605482685	-0.006793363870391755	GGCAATTAGG
chr8	58586677	58586678	chr8:58586678:G:A	rs3816846	G	A	A	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr8	58867750	58867751	chr8:58867751:G:A	rs16924147	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr8	58867767	58867768	chr8:58867768:T:C	chr8:58867768:T:C	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.540805396797378	3.68070895323663	GCCAATTAGT
chr8	58881973	58881974	chr8:58881974:G:A	rs151210218	G	A	g	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr8	59249000	59249001	chr8:59249001:A:G	rs4317557	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr8	59312515	59312516	chr8:59312516:T:G	rs6471777	T	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	59783966	59783967	chr8:59783967:T:C	rs1473594	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr8	59869232	59869233	chr8:59869233:T:C	rs56933815	T	C	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr8	60053733	60053734	chr8:60053734:G:A	rs534017072	G	A	g	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	60109283	60109284	chr8:60109284:T:C	rs16925756	T	C	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	60109306	60109307	chr8:60109307:C:A	rs2611363	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.678572715728777	6.131583516803842	AGCAATTACC
chr8	60109314	60109315	chr8:60109315:T:C	rs12680159	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	60198518	60198519	chr8:60198519:C:T	rs10086417	C	T	T	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	60279030	60279031	chr8:60279031:T:G	rs7841372	T	G	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.150894896428305	4.151508936465841	GGTAATTACC
chr8	60919887	60919888	chr8:60919888:C:T	rs58187777	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr8	60948217	60948218	chr8:60948218:A:C	rs75175564	A	C	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr8	60967797	60967798	chr8:60967798:G:T	rs149314092	G	T	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	62475616	62475617	chr8:62475617:A:T	rs1451835	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	63055867	63055868	chr8:63055868:G:A	rs72659805	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.835921975967242	6.904037796958669	GCCAATTAGC
chr8	64569084	64569085	chr8:64569085:C:G	rs55730348	C	G	C	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	64674147	64674148	chr8:64674148:T:G	rs13260704	T	G	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr8	66006007	66006008	chr8:66006008:T:C	rs10504394	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr8	66459557	66459558	chr8:66459558:G:T	rs890514	G	T	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr8	66940224	66940225	chr8:66940225:C:G	chr8:66940225:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	67390575	67390576	chr8:67390576:C:T	rs78398749	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.678572715728777	6.328799166028848	AGCAATTACC
chr8	67910116	67910117	chr8:67910117:C:G	rs34561815	C	G	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	68204242	68204243	chr8:68204243:T:C	rs728032	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	68729266	68729267	chr8:68729267:T:A	rs55821789	T	A	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	69608777	69608778	chr8:69608778:G:A	rs147966836	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	69614992	69614993	chr8:69614993:G:A	rs149028834	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	69633223	69633224	chr8:69633224:A:G	rs17721456	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	69633227	69633228	chr8:69633228:T:C	rs531922557	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr8	69706275	69706276	chr8:69706276:A:G	rs2933053	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	69827581	69827582	chr8:69827582:G:A	rs7833228	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	-	7.056921200256407	6.707147650556478	AGTAATTACG
chr8	70323065	70323066	chr8:70323066:T:C	rs58374832	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.604407200393974	4.744310756833228	AGTAATTAGC
chr8	70323084	70323085	chr8:70323085:G:A	rs16936918	G	A	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	70516518	70516519	chr8:70516519:A:C	rs2726321	A	C	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr8	71058957	71058958	chr8:71058958:A:G	rs62506033	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr8	71869007	71869008	chr8:71869008:T:C	rs9643633	T	C	C	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr8	71929654	71929655	chr8:71929655:G:C	chr8:71929655:G:C	G	C	G	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr8	72573856	72573857	chr8:72573857:G:A	rs1431651	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.376359977658197	7.435275621829636	GCTAATTAGC
chr8	73098510	73098511	chr8:73098511:T:C	rs7006215	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	73178903	73178904	chr8:73178904:C:T	rs10504548	C	T	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	73371609	73371610	chr8:73371610:G:A	rs12156358	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	73451656	73451657	chr8:73451657:C:T	rs373458317	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	73604893	73604894	chr8:73604894:T:C	rs59642272	T	C	C	Hoxd3.mouse_homeodomain_1	5	1	+	6.466705306321288	-0.3738519180973717	CCCAATTAGC
chr8	73673144	73673145	chr8:73673145:A:G	rs150527132	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	73688401	73688402	chr8:73688402:A:G	rs12680991	A	G	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	74166784	74166785	chr8:74166785:G:A	rs2956040	G	A	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	74755853	74755854	chr8:74755854:A:G	rs117796379	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	75538210	75538211	chr8:75538211:A:G	rs57525159	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr8	75724301	75724302	chr8:75724302:G:A	rs16939148	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	75724305	75724306	chr8:75724306:G:T	rs4735694	G	T	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	75728990	75728991	chr8:75728991:C:T	rs7014196	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr8	75944804	75944805	chr8:75944805:C:T	rs6991920	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	76252748	76252749	chr8:76252749:G:A	rs2082216	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	78011967	78011968	chr8:78011968:T:C	rs13258410	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	78852349	78852350	chr8:78852350:A:G	rs74347390	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	79613713	79613714	chr8:79613714:G:A	rs13255279	G	A	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr8	79797989	79797990	chr8:79797990:T:C	rs80092564	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	79827399	79827400	chr8:79827400:G:C	rs557063670	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	80332127	80332128	chr8:80332128:C:A	rs73269353	C	A	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	80397152	80397153	chr8:80397153:G:A	rs75911983	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.122884842874458	6.827768263704594	AGCAATTAAC
chr8	80597175	80597176	chr8:80597176:T:C	rs72689741	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr8	81047881	81047882	chr8:81047882:T:C	rs16908466	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	81193939	81193940	chr8:81193940:A:G	rs78265524	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	82360851	82360852	chr8:82360852:T:G	rs1031874	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr8	82360860	82360861	chr8:82360861:G:A	rs17720831	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr8	83132423	83132424	chr8:83132424:G:C	rs62515262	G	C	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr8	83573930	83573931	chr8:83573931:G:A	rs979021073	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	85007463	85007464	chr8:85007464:C:G	rs2896440	C	G	g	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr8	86176302	86176303	chr8:86176303:A:G	rs143917860	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	86238079	86238080	chr8:86238080:C:T	rs4463401	C	T	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	86320315	86320316	chr8:86320316:C:T	rs2953516	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr8	86320322	86320323	chr8:86320323:C:G	rs2976178	C	G	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr8	86602014	86602015	chr8:86602015:T:C	rs1441249	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.122884842874458	0.2823276184557989	AGCAATTAAC
chr8	86743726	86743727	chr8:86743727:A:T	rs62622781	A	T	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.835921975967242	4.315311612613065	GCCAATTAGC
chr8	86967688	86967689	chr8:86967689:G:A	rs111855762	G	A	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	87700064	87700065	chr8:87700065:A:G	rs80136576	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	88083394	88083395	chr8:88083395:A:C	rs78174400	A	C	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	88132506	88132507	chr8:88132507:C:T	rs28907614	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr8	88871654	88871655	chr8:88871655:A:G	chr8:88871655:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	89001863	89001864	chr8:89001864:G:T	rs2464411	G	T	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	89983991	89983992	chr8:89983992:C:A	rs114266129	C	A	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr8	90311339	90311340	chr8:90311340:T:C	rs7845926	T	C	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	90530436	90530437	chr8:90530437:C:A	rs6997936	C	A	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	91348167	91348168	chr8:91348168:T:C	rs921231	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	91603179	91603180	chr8:91603180:T:C	rs843075	T	C	T	Hoxd3.mouse_homeodomain_1	2	1	+	7.374201862239223	6.8337638605482685	GGTAATTAGG
chr8	91747158	91747159	chr8:91747159:A:G	rs73313713	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	92454905	92454906	chr8:92454906:C:A	rs11774614	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr8	92470151	92470152	chr8:92470152:T:C	rs2046130	T	C	T	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	92551782	92551783	chr8:92551783:G:A	rs550337861	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	-	6.6266367080656385	6.466829206223548	CGCAATTAGC
chr8	93456345	93456346	chr8:93456346:G:C	rs140342749	G	C	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	93495971	93495972	chr8:93495972:C:T	rs10106360	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	93495984	93495985	chr8:93495985:G:C	rs533156695	G	C	G	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	93914775	93914776	chr8:93914776:G:C	rs10956889	G	C	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	93983026	93983027	chr8:93983027:G:T	rs4489299	G	T	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	94435905	94435906	chr8:94435906:C:T	rs2930964	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	94824430	94824431	chr8:94824431:C:T	rs534754187	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	95451810	95451811	chr8:95451811:A:C	rs6987245	A	C	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	95504037	95504038	chr8:95504038:T:C	rs2202057	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	95715735	95715736	chr8:95715736:G:A	rs150906603	G	A	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	95725942	95725943	chr8:95725943:A:C	rs3102480	A	C	a	Hoxd3.mouse_homeodomain_1	5	1	-	7.007267207914503	4.007881247952039	TGTAATTAGC
chr8	95758763	95758764	chr8:95758764:C:T	rs3099107	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	96261314	96261315	chr8:96261315:G:A	rs3808386	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	7.376359977658197	7.435275621829636	GCTAATTAGC
chr8	96523236	96523237	chr8:96523237:T:C	rs13259047	T	C	C	Hoxd3.mouse_homeodomain_1	3	1	-	6.678572715728777	4.689714813815595	AGCAATTACC
chr8	97130701	97130702	chr8:97130702:A:T	rs2874140	A	T	T	Hoxd3.mouse_homeodomain_1	4	1	+	6.700736798541729	4.572982905826323	GGCAATTAGT
chr8	97352062	97352063	chr8:97352063:C:T	rs77352967	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr8	97643958	97643959	chr8:97643959:G:A	chr8:97643959:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	97643978	97643979	chr8:97643979:A:G	rs2512449	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	6.962953441130107	6.894837620138681	ACCAATTAAC
chr8	97643996	97643997	chr8:97643997:G:A	rs567737374	G	A	G	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	97643998	97643999	chr8:97643999:T:G	rs536625945	T	G	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	97644001	97644002	chr8:97644002:T:A	rs1370945567	T	A	T	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr8	97695983	97695984	chr8:97695984:T:C	rs79899807	T	C	T	Hoxd3.mouse_homeodomain_1	3	1	-	6.960795325711134	4.971937423797952	AGCAATTAAG
chr8	97778187	97778188	chr8:97778188:A:G	rs72671587	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	98204703	98204704	chr8:98204704:A:G	rs1003680363	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.700736798541729	3.840640354980981	GGCAATTAGT
chr8	98311292	98311293	chr8:98311293:A:T	rs11990127	A	T	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	99824133	99824134	chr8:99824134:A:G	rs2290153	A	G	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	100416917	100416918	chr8:100416918:C:T	rs535611334	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	100440706	100440707	chr8:100440707:C:T	rs10107200	C	T	c	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	100440739	100440740	chr8:100440740:G:A	rs1367064984	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	100891356	100891357	chr8:100891357:C:T	rs566740010	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	101004135	101004136	chr8:101004136:A:C	rs10092268	A	C	A	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	101494633	101494634	chr8:101494634:A:G	rs674330	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	101769875	101769876	chr8:101769876:A:G	rs144606040	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr8	101986858	101986859	chr8:101986859:A:C	rs11786361	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	7.214270460494872	3.3737712839428045	GCTAATTAGG
chr8	102102335	102102336	chr8:102102336:G:T	rs670976	G	T	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	102189791	102189792	chr8:102189792:C:T	rs1265141	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	6.732748102975356	6.3478484212137465	GCCAATTAAG
chr8	102411853	102411854	chr8:102411854:C:T	rs369227718	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	103760395	103760396	chr8:103760396:A:G	rs17235384	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	104720317	104720318	chr8:104720318:C:G	rs1992211	C	G	c	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	105641825	105641826	chr8:105641826:A:G	rs9656866	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr8	105641862	105641863	chr8:105641863:G:A	rs9656867	G	A	A	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	105989995	105989996	chr8:105989996:G:A	rs11776615	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	105989997	105989998	chr8:105989998:A:G	rs2029881	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.0639691987030195	6.995853377711593	AGCAATTAGC
chr8	106378167	106378168	chr8:106378168:C:T	rs7833269	C	T	T	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	106398570	106398571	chr8:106398571:C:A	rs12547728	C	A	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	106533299	106533300	chr8:106533300:G:T	rs2167802	G	T	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	107953085	107953086	chr8:107953086:T:C	rs634897	T	C	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	108444330	108444331	chr8:108444331:C:G	chr8:108444331:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.503391442821062	7.663322844565413	ACTAATTAAC
chr8	109082790	109082791	chr8:109082791:A:C	chr8:109082791:A:C	A	C	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	109359205	109359206	chr8:109359206:A:G	rs7835131	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr8	109607470	109607471	chr8:109607471:C:A	rs115516622	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	109652582	109652583	chr8:109652583:G:A	rs57877857	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	-	7.435275621829636	6.911136200259825	GCTAATTAAC
chr8	109741442	109741443	chr8:109741443:C:T	rs7463805	C	T	C	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	109745377	109745378	chr8:109745378:T:C	rs116819924	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.6738324588039175	3.8137360152431694	GCCAATTAGG
chr8	111669332	111669333	chr8:111669333:T:C	rs10090698	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	114122931	114122932	chr8:114122932:T:C	rs62542929	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr8	114554556	114554557	chr8:114554557:G:A	rs73705324	G	A	g	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr8	115348735	115348736	chr8:115348736:A:G	rs777596	A	G	G	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	115547550	115547551	chr8:115547551:T:C	rs144716327	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	117947848	117947849	chr8:117947849:A:C	rs11562704	A	C	A	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	118101739	118101740	chr8:118101740:C:T	rs2468137	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr8	118209942	118209943	chr8:118209943:C:T	rs4876802	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	118430657	118430658	chr8:118430658:A:C	rs12156430	A	C	C	Hoxd3.mouse_homeodomain_1	9	1	-	6.700736798541729	6.8337638605482685	GGCAATTAGT
chr8	118646444	118646445	chr8:118646445:T:C	rs73321347	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.732748102975356	6.6738324588039175	GCCAATTAAG
chr8	118898365	118898366	chr8:118898366:C:T	rs4593581	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	+	6.678572715728777	6.383456136558912	AGCAATTACC
chr8	119657553	119657554	chr8:119657554:G:A	rs73712205	G	A	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	119929712	119929713	chr8:119929713:G:T	rs7007554	G	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr8	121328745	121328746	chr8:121328746:C:T	rs17276050	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr8	121429865	121429866	chr8:121429866:C:T	rs7846624	C	T	T	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	122168627	122168628	chr8:122168628:C:G	rs10095032	C	G	c	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr8	122168628	122168629	chr8:122168629:C:T	rs6470064	C	T	t	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	122185703	122185704	chr8:122185704:T:C	rs73709568	T	C	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	122568087	122568088	chr8:122568088:A:G	rs1403567	A	G	G	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	122919623	122919624	chr8:122919624:G:T	rs16897667	G	T	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	122995974	122995975	chr8:122995975:A:T	rs12056583	A	T	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	123472220	123472221	chr8:123472221:A:C	rs16898375	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.007267207914503	4.55811173763965	TGTAATTAGC
chr8	123485802	123485803	chr8:123485803:A:G	rs6999471	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	123565180	123565181	chr8:123565181:T:C	rs72709099	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	123580012	123580013	chr8:123580013:A:G	rs1228917553	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	123647088	123647089	chr8:123647089:C:A	rs11991744	C	A	A	Hoxd3.mouse_homeodomain_1	8	1	+	7.056921200256407	7.501233327402089	AGTAATTACG
chr8	123945723	123945724	chr8:123945724:A:C	rs4871444	A	C	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.4444757986496235	6.347593106337824	ACTAATTAGC
chr8	124080987	124080988	chr8:124080988:T:C	rs533194875	T	C	T	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr8	124270166	124270167	chr8:124270167:C:T	rs76879997	C	T	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr8	124566689	124566690	chr8:124566690:G:A	rs79503489	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	124857603	124857604	chr8:124857604:A:C	rs77357780	A	C	A	Hoxd3.mouse_homeodomain_1	4	1	+	5.898970685399792	3.44981521512494	GGCCATTAGC
chr8	125154400	125154401	chr8:125154401:A:G	rs569606390	A	G	A	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	125173288	125173289	chr8:125173289:A:G	rs147338055	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	125209731	125209732	chr8:125209732:A:G	rs73351205	A	G	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	125340910	125340911	chr8:125340911:C:T	rs77777704	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	125474044	125474045	chr8:125474045:T:G	rs4567059	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	125525079	125525080	chr8:125525080:C:A	rs560895388	C	A	C	Hoxd3.mouse_homeodomain_1	9	1	+	6.450525492992999	5.903536294068065	GCCAATTACC
chr8	125977970	125977971	chr8:125977971:C:G	chr8:125977971:C:G	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	126010819	126010820	chr8:126010820:C:T	rs10108513	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	126810665	126810666	chr8:126810666:C:T	rs34002467	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	-	7.374201862239223	7.433117506410662	GGTAATTAGG
chr8	126885473	126885474	chr8:126885474:G:C	rs112036468	G	C	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	126885480	126885481	chr8:126885481:C:A	rs80347593	C	A	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	126953155	126953156	chr8:126953156:G:A	rs72723980	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr8	127261480	127261481	chr8:127261481:T:G	rs4871777	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	127277345	127277346	chr8:127277346:C:T	rs283710	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	127301114	127301115	chr8:127301115:G:A	rs283727	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.6266367080656385	6.466829206223548	CGCAATTAGC
chr8	127494201	127494202	chr8:127494202:C:T	rs78034610	C	T	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	127494211	127494212	chr8:127494212:A:G	rs1562435	A	G	A	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr8	127652073	127652074	chr8:127652074:C:T	rs76596255	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.678572715728777	6.328799166028848	AGCAATTACC
chr8	127652175	127652176	chr8:127652176:A:G	rs74811325	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	127736929	127736930	chr8:127736930:T:G	chr8:127736930:T:G	T	G	T	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr8	127742840	127742841	chr8:127742841:G:A	rs62515808	G	A	G	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr8	127895714	127895715	chr8:127895715:T:G	rs4733804	T	G	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	127944851	127944852	chr8:127944852:C:T	rs13278829	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr8	128014882	128014883	chr8:128014883:A:G	rs115385767	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	128174178	128174179	chr8:128174179:A:G	rs7825733	A	G	A	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	128175719	128175720	chr8:128175720:G:T	chr8:128175720:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.8337638605482685	6.0985938278740965	GGCAATTAGG
chr8	128175723	128175724	chr8:128175724:T:C	rs6987519	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr8	128213255	128213256	chr8:128213256:A:G	rs11774172	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr8	128461759	128461760	chr8:128461760:A:G	rs1400473	A	G	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr8	128848420	128848421	chr8:128848421:C:T	rs72726590	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr8	129319818	129319819	chr8:129319819:C:T	rs2217588	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr8	129710032	129710033	chr8:129710033:C:T	rs114240635	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	130105638	130105639	chr8:130105639:T:C	rs34303787	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.663322844565413	4.803226401004666	AGTAATTAAC
chr8	130105665	130105666	chr8:130105666:A:T	rs1031475	A	T	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr8	130259642	130259643	chr8:130259643:T:C	rs376437320	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	130528339	130528340	chr8:130528340:G:T	rs11782944	G	T	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	130541698	130541699	chr8:130541699:G:A	rs11786056	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	130542032	130542033	chr8:130542033:A:G	rs13267508	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr8	130542075	130542076	chr8:130542076:T:C	rs13270154	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	130578415	130578416	chr8:130578416:G:A	rs10505551	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	131279355	131279356	chr8:131279356:A:C	rs4128913	A	C	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	131553256	131553257	chr8:131553257:A:T	rs35668879	A	T	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr8	131646073	131646074	chr8:131646074:C:T	rs16904490	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	131703574	131703575	chr8:131703575:C:T	rs1894929	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	131913755	131913756	chr8:131913756:A:C	rs59525889	A	C	C	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr8	132111419	132111420	chr8:132111420:G:A	rs12678059	G	A	g	Hoxd3.mouse_homeodomain_1	9	1	+	7.056921200256407	6.672021518494797	AGTAATTACG
chr8	132111423	132111424	chr8:132111424:A:G	rs2469502	A	G	a	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr8	132128835	132128836	chr8:132128836:G:C	rs10956640	G	C	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	132128836	132128837	chr8:132128837:G:T	rs10956641	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	132446609	132446610	chr8:132446610:G:C	rs2721906	G	C	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr8	132488071	132488072	chr8:132488072:G:A	rs10956664	G	A	A	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr8	132488072	132488073	chr8:132488073:C:T	rs10956665	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr8	132520689	132520690	chr8:132520690:T:C	rs145349285	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	7.273186104666311	4.413089661105564	GCTAATTAAG
chr8	132520707	132520708	chr8:132520708:G:C	rs2721882	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	132552155	132552156	chr8:132552156:C:A	rs10956672	C	A	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr8	132713472	132713473	chr8:132713473:C:T	rs10110686	C	T	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr8	132713477	132713478	chr8:132713478:G:T	rs10110952	G	T	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	132955640	132955641	chr8:132955641:G:C	rs885196	G	C	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr8	133049860	133049861	chr8:133049861:C:T	rs186533934	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr8	133249557	133249558	chr8:133249558:G:A	rs62514041	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	133351402	133351403	chr8:133351403:G:A	rs2929953	G	A	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	134110645	134110646	chr8:134110646:G:A	rs1124525	G	A	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	134199684	134199685	chr8:134199685:G:C	rs11991784	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr8	134529587	134529588	chr8:134529588:A:G	rs7011356	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	134780996	134780997	chr8:134780997:T:C	rs77864138	T	C	t	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	134862561	134862562	chr8:134862562:A:G	rs16905257	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr8	134964787	134964788	chr8:134964788:G:A	rs12678242	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr8	135014931	135014932	chr8:135014932:C:A	rs57599220	C	A	c	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr8	135236351	135236352	chr8:135236352:T:C	rs1057174636	T	C	T	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	135346225	135346226	chr8:135346226:G:A	rs882615	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.466705306321288	6.171588727151423	CCCAATTAGC
chr8	135495448	135495449	chr8:135495449:T:C	rs960730	T	C	C	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	135588488	135588489	chr8:135588489:C:T	rs7835526	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	136022585	136022586	chr8:136022586:T:A	rs12547225	T	A	T	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	136259907	136259908	chr8:136259908:C:T	rs34143958	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	136350475	136350476	chr8:136350476:A:C	rs16905711	A	C	C	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	136415950	136415951	chr8:136415951:G:A	rs6577728	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	+	6.439408687090748	6.507524508082175	GGTCATTAGC
chr8	136646423	136646424	chr8:136646424:C:G	rs305360	C	G	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.007267207914503	6.847335806170153	TGTAATTAGC
chr8	137303753	137303754	chr8:137303754:C:A	rs7829832	C	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	7.433117506410662	6.904093334922617	GGTAATTAAG
chr8	137598390	137598391	chr8:137598391:A:T	rs950022	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr8	137793188	137793189	chr8:137793189:G:A	rs6577840	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	137842867	137842868	chr8:137842868:A:G	rs10113052	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.960795325711134	4.971937423797952	AGCAATTAAG
chr8	138704358	138704359	chr8:138704359:T:C	rs12546630	T	C	C	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr8	138766353	138766354	chr8:138766354:C:T	rs11774530	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	138766368	138766369	chr8:138766369:C:G	rs11166843	C	G	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	139381583	139381584	chr8:139381584:T:G	rs1382025	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr8	139675410	139675411	chr8:139675411:A:G	rs9324511	A	G	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	139675434	139675435	chr8:139675435:A:G	rs10105506	A	G	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr8	139705805	139705806	chr8:139705806:C:T	rs1382437423	C	T	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	139795513	139795514	chr8:139795514:T:C	rs141540229	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.960795325711134	6.892679504719707	AGCAATTAAG
chr8	139795804	139795805	chr8:139795805:A:G	rs183736268	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	139859341	139859342	chr8:139859342:A:G	rs139300620	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr8	140303612	140303613	chr8:140303613:G:A	rs116435278	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.6266367080656385	5.958915941362238	CGCAATTAGC
chr8	140504084	140504085	chr8:140504085:T:C	rs4961309	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	140724286	140724287	chr8:140724287:C:T	rs7834669	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr8	140857416	140857417	chr8:140857417:T:A	rs13253993	T	A	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	140897715	140897716	chr8:140897716:A:G	rs145907599	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.962953441130107	4.9740955392169255	ACCAATTAAC
chr8	141041585	141041586	chr8:141041586:A:G	rs115258198	A	G	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	141055432	141055433	chr8:141055433:G:A	rs11784640	G	A	A	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	141079191	141079192	chr8:141079192:T:C	rs10046676	T	C	c	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	141157307	141157308	chr8:141157308:G:A	rs36084003	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	141900142	141900143	chr8:141900143:C:T	rs183999717	C	T	c	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr8	142236023	142236024	chr8:142236024:A:G	rs34643171	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr8	143069526	143069527	chr8:143069527:C:T	rs11986393	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	143280078	143280079	chr8:143280079:A:G	rs4471055	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	143847638	143847639	chr8:143847639:C:T	rs11779128	C	T	.	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr8	143995365	143995366	chr8:143995366:C:T	rs58404036	C	T	C	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	143995392	143995393	chr8:143995393:G:A	rs75217122	G	A	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr8	144337848	144337849	chr8:144337849:T:A	chr8:144337849:T:A	T	A	T	Hoxd3.mouse_homeodomain_1	5	1	+	6.304615789157963	2.527916667340895	CCCAATTAGG
chr9	392681	392682	chr9:392682:C:T	rs16937757	C	T	C	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	552323	552324	chr9:552324:A:G	rs2804288	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	552327	552328	chr9:552328:C:T	rs73639346	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr9	590065	590066	chr9:590066:A:G	rs76274150	A	G	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	720582	720583	chr9:720583:C:T	rs7861700	C	T	T	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	720615	720616	chr9:720616:T:G	rs12003893	T	G	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr9	723114	723115	chr9:723115:C:G	rs73374850	C	G	C	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	792734	792735	chr9:792735:A:C	chr9:792735:A:C	A	C	a	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	894223	894224	chr9:894224:C:A	rs59168737	C	A	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	2083751	2083752	chr9:2083752:C:T	rs779384477	C	T	C	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr9	2083754	2083755	chr9:2083755:A:G	rs10811397	A	G	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr9	2083759	2083760	chr9:2083760:C:T	rs375450359	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	2132777	2132778	chr9:2132778:T:C	rs10811515	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr9	2173295	2173296	chr9:2173296:G:T	rs7048976	G	T	T	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr9	2335405	2335406	chr9:2335406:A:C	rs7020738	A	C	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	2448714	2448715	chr9:2448715:C:T	rs7864741	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	2582504	2582505	chr9:2582505:T:C	rs10967054	T	C	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	2596568	2596569	chr9:2596569:C:T	rs1454637	C	T	C	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr9	2623105	2623106	chr9:2623106:G:A	rs77854824	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.007267207914503	6.339546441211103	TGTAATTAGC
chr9	2785084	2785085	chr9:2785085:T:C	rs374708438	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.304615789157963	3.444519345597216	CCCAATTAGG
chr9	2818168	2818169	chr9:2818169:G:A	rs73377839	G	A	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	2818193	2818194	chr9:2818194:C:G	rs74556436	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr9	2958568	2958569	chr9:2958569:A:G	rs17799876	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr9	3755994	3755995	chr9:3755995:C:T	rs12686401	C	T	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	4299844	4299845	chr9:4299845:G:C	rs547410899	G	C	G	Hoxd3.mouse_homeodomain_1	10	0	-	0	0	.
chr9	4325041	4325042	chr9:4325042:T:C	rs7034818	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.122884842874458	7.054769021883032	AGCAATTAAC
chr9	4519959	4519960	chr9:4519960:A:T	rs10118909	A	T	T	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr9	4665686	4665687	chr9:4665687:C:T	rs74734377	C	T	C	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	4707077	4707078	chr9:4707078:A:G	rs72695843	A	G	A	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	4813089	4813090	chr9:4813090:A:C	rs468471	A	C	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	4856338	4856339	chr9:4856339:G:T	rs7870147	G	T	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	5450749	5450750	chr9:5450750:A:G	rs7852887	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.450525492992999	3.5904290494322515	GCCAATTACC
chr9	5626111	5626112	chr9:5626112:A:C	rs13283193	A	C	t	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	7063377	7063378	chr9:7063378:A:G	rs16925266	A	G	A	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr9	7147777	7147778	chr9:7147778:G:A	rs186357076	G	A	G	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr9	7524041	7524042	chr9:7524042:C:T	rs10758870	C	T	T	Hoxd3.mouse_homeodomain_1	1	1	-	7.44231768323065	6.7745969165272495	AGTAATTAGG
chr9	7543663	7543664	chr9:7543664:C:T	rs12344464	C	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	7543674	7543675	chr9:7543675:A:G	rs62530070	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr9	7543700	7543701	chr9:7543701:G:A	rs149027374	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	7720366	7720367	chr9:7720367:A:G	rs842295	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr9	7784666	7784667	chr9:7784667:T:C	rs73417567	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	7968027	7968028	chr9:7968028:G:A	rs12351762	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	8013158	8013159	chr9:8013159:G:T	rs9408723	G	T	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	8261909	8261910	chr9:8261910:A:G	rs3847281	A	G	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr9	8351538	8351539	chr9:8351539:G:C	rs10815830	G	C	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	8387336	8387337	chr9:8387337:G:C	rs61110707	G	C	g	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	8510567	8510568	chr9:8510568:A:G	rs2039691	A	G	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	8532361	8532362	chr9:8532362:C:T	rs10815907	C	T	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	8716104	8716105	chr9:8716105:C:T	rs1991931	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	10173019	10173020	chr9:10173020:C:T	rs4740444	C	T	C	Hoxd3.mouse_homeodomain_1	25	0	-	0	0	.
chr9	10192289	10192290	chr9:10192290:A:C	rs294856	A	C	A	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	10686547	10686548	chr9:10686548:C:T	rs4609245	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.663322844565413	6.995602077862013	AGTAATTAAC
chr9	11495719	11495720	chr9:11495720:A:T	rs17189174	A	T	A	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	11538141	11538142	chr9:11538142:G:A	rs4741167	G	A	A	Hoxd3.mouse_homeodomain_1	9	1	-	6.995853377711593	6.700736798541729	GGCAATTAGC
chr9	11792790	11792791	chr9:11792791:A:T	rs9695463	A	T	A	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	12162854	12162855	chr9:12162855:C:T	rs10809705	C	T	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr9	12359583	12359584	chr9:12359584:G:C	rs4628343	G	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr9	12722227	12722228	chr9:12722228:C:G	rs1326798	C	G	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr9	13049379	13049380	chr9:13049380:C:T	rs10960914	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr9	13095318	13095319	chr9:13095319:G:C	rs74750435	G	C	G	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr9	13591906	13591907	chr9:13591907:C:T	rs13299116	C	T	c	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr9	13728600	13728601	chr9:13728601:A:G	rs12350251	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.604407200393974	4.744310756833228	AGTAATTAGC
chr9	13811492	13811493	chr9:13811493:A:G	rs573781537	A	G	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	13934704	13934705	chr9:13934705:G:T	rs34764349	G	T	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.960795325711134	6.827768263704594	AGCAATTAAG
chr9	14190287	14190288	chr9:14190288:A:T	rs7034162	A	T	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	14564286	14564287	chr9:14564287:G:A	rs10961580	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	14702372	14702373	chr9:14702373:G:A	rs74581086	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	15012980	15012981	chr9:15012981:A:G	rs9886868	A	G	A	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr9	15116910	15116911	chr9:15116911:C:G	rs2800610	C	G	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr9	15122883	15122884	chr9:15122884:C:A	rs2800619	C	A	A	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	15122888	15122889	chr9:15122889:G:A	rs2800620	G	A	A	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	15200171	15200172	chr9:15200172:T:G	rs563302	T	G	T	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	15401640	15401641	chr9:15401641:G:T	rs74726857	G	T	G	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	16079375	16079376	chr9:16079376:A:G	rs1887678	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	7.374201862239223	5.385343960326042	GGTAATTAGG
chr9	16412869	16412870	chr9:16412870:T:G	rs16934619	T	G	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr9	16458848	16458849	chr9:16458849:A:G	rs148538253	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	16501217	16501218	chr9:16501218:G:C	rs10962458	G	C	C	Hoxd3.mouse_homeodomain_1	1	1	+	7.007267207914503	6.847335806170153	TGTAATTAGC
chr9	16572643	16572644	chr9:16572644:C:T	rs1927617	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	16848546	16848547	chr9:16848547:A:G	rs562478793	A	G	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	16983306	16983307	chr9:16983307:G:A	rs78713074	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	17291981	17291982	chr9:17291982:A:G	rs143184847	A	G	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	17342944	17342945	chr9:17342945:C:T	rs10963043	C	T	C	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	18346770	18346771	chr9:18346771:G:A	rs2226017	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr9	18474822	18474823	chr9:18474823:T:C	rs17206601	T	C	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	18787795	18787796	chr9:18787796:A:G	rs10963760	A	G	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.450525492992999	3.6175745418232976	GCCAATTACC
chr9	19397504	19397505	chr9:19397505:A:G	rs7875803	A	G	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr9	19411859	19411860	chr9:19411860:A:T	rs10811178	A	T	T	Hoxd3.mouse_homeodomain_1	5	1	-	6.960795325711134	3.184096203894065	AGCAATTAAG
chr9	20201868	20201869	chr9:20201869:A:T	rs79521634	A	T	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.8337638605482685	4.744266528717691	GGCAATTAGG
chr9	20592533	20592534	chr9:20592534:T:C	rs10964630	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	21002457	21002458	chr9:21002458:C:T	rs7847370	C	T	C	Hoxd3.mouse_homeodomain_1	8	1	+	6.288435975829675	5.938662426129746	GCCAATTACG
chr9	21111182	21111183	chr9:21111183:C:T	rs78185432	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	21553538	21553539	chr9:21553539:G:C	rs10965064	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr9	21750445	21750446	chr9:21750446:C:T	rs1335507	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr9	21866500	21866501	chr9:21866501:C:T	rs2027484	C	T	T	Hoxd3.mouse_homeodomain_1	9	1	-	7.433117506410662	7.048217824649052	GGTAATTAAG
chr9	22039426	22039427	chr9:22039427:C:T	rs12376000	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	23089139	23089140	chr9:23089140:G:T	rs73454582	G	T	G	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	23537597	23537598	chr9:23537598:G:A	chr9:23537598:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr9	23852267	23852268	chr9:23852268:A:G	rs10811980	A	G	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	23854465	23854466	chr9:23854466:G:A	rs151073468	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr9	25802541	25802542	chr9:25802542:C:T	rs13287098	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	6.277319169927424	5.609598403224022	GGTCATTAGG
chr9	25805163	25805164	chr9:25805164:G:A	rs7849755	G	A	A	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	25905809	25905810	chr9:25905810:A:G	rs16909878	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	26163455	26163456	chr9:26163456:A:G	rs2245570	A	G	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	26505919	26505920	chr9:26505920:T:C	rs10511790	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	7.300090444404122	7.241174800232684	GGTAATTAAT
chr9	26950049	26950050	chr9:26950050:C:T	rs143927861	C	T	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr9	27108801	27108802	chr9:27108802:G:A	rs630023	G	A	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr9	27108811	27108812	chr9:27108812:G:T	rs10967719	G	T	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr9	27152035	27152036	chr9:27152036:C:A	rs7865376	C	A	C	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	27564416	27564417	chr9:27564417:A:G	rs7859060	A	G	A	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr9	27997218	27997219	chr9:27997219:G:A	rs1930014	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.536291379402548	7.241174800232684	GGTAATTAGC
chr9	29964431	29964432	chr9:29964432:C:T	rs59206748	C	T	C	Hoxd3.mouse_homeodomain_1	6	1	-	6.220683642931706	4.715704985617274	GGTAATGAGC
chr9	30435313	30435314	chr9:30435314:G:A	rs7875751	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.241174800232684	6.573454033529282	GGTAATTAGT
chr9	30771460	30771461	chr9:30771461:G:A	rs147089969	G	A	G	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr9	31104161	31104162	chr9:31104162:T:C	rs11791961	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	31642970	31642971	chr9:31642971:A:G	rs17265534	A	G	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	32502945	32502946	chr9:32502946:A:C	rs658253	A	C	C	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	32821062	32821063	chr9:32821063:A:G	rs664407	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	6.9039694350203575	4.04387299145961	CCTAATTAAG
chr9	33031019	33031020	chr9:33031020:A:C	rs143636261	A	C	A	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	33031780	33031781	chr9:33031781:A:G	rs10971349	A	G	A	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	33514844	33514845	chr9:33514845:T:G	rs10491617	T	G	.	Hoxd3.mouse_homeodomain_1	6	1	+	6.518641313984426	5.203033577513584	ACCAATTACC
chr9	33647381	33647382	chr9:33647382:G:T	rs76742417	G	T	.	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	33767481	33767482	chr9:33767482:A:C	rs141962378	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	34023573	34023574	chr9:34023574:C:T	rs1785502	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	+	7.167074709756593	7.007267207914503	CGTAATTAGC
chr9	34217077	34217078	chr9:34217078:C:T	rs4878557	C	T	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	34784191	34784192	chr9:34784192:G:A	rs139258048	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	35161951	35161952	chr9:35161952:C:T	rs191459421	C	T	c	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	35288974	35288975	chr9:35288975:A:T	chr9:35288975:A:T	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr9	35640947	35640948	chr9:35640948:C:T	rs10814264	C	T	c	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	35805136	35805137	chr9:35805137:T:C	rs7864199	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.282386281486299	7.214270460494872	ACTAATTAGG
chr9	36398750	36398751	chr9:36398751:T:C	rs62541847	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.341301925657738	0.5007447012390781	ACTAATTAAG
chr9	36407181	36407182	chr9:36407182:G:A	rs180728956	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.503391442821062	7.208274863651198	ACTAATTAAC
chr9	36863768	36863769	chr9:36863769:C:T	rs76720039	C	T	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	36988853	36988854	chr9:36988854:T:C	rs7850976	T	C	T	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr9	37076620	37076621	chr9:37076621:A:T	rs62533744	A	T	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	37521964	37521965	chr9:37521965:C:A	rs34765971	C	A	C	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	38285027	38285028	chr9:38285028:C:T	rs117620248	C	T	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	39036022	39036023	chr9:39036023:A:C	rs796651381	A	C	-	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	39036032	39036033	chr9:39036033:G:T	rs796189180	G	T	-	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr9	42370293	42370294	chr9:42370294:C:T	rs1285829586	C	T	c	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	61524252	61524253	chr9:61524253:A:T	rs144215085	A	T	.	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr9	62801088	62801089	chr9:62801089:T:C	rs12552831	T	C	.	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	67091586	67091587	chr9:67091587:C:T	rs3910343	C	T	c	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	67537583	67537584	chr9:67537584:G:A	rs796598795	G	A	g	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	68499892	68499893	chr9:68499893:C:A	rs7874438	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	68802970	68802971	chr9:68802971:T:C	rs60824041	T	C	T	Hoxd3.mouse_homeodomain_1	5	1	+	7.282386281486299	0.4418290570676392	ACTAATTAGG
chr9	68808386	68808387	chr9:68808387:T:C	rs28508550	T	C	T	Hoxd3.mouse_homeodomain_1	0	1	-	7.30929062122411	7.241174800232684	AGTAATTAGT
chr9	69077220	69077221	chr9:69077221:T:G	rs11145063	T	G	T	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	69675089	69675090	chr9:69675090:A:G	rs117527664	A	G	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	70669005	70669006	chr9:70669006:C:T	rs17055479	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.995853377711593	7.536291379402548	GGCAATTAGC
chr9	70680213	70680214	chr9:70680214:T:G	rs10868871	T	G	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr9	70856835	70856836	chr9:70856836:T:C	rs17470958	T	C	C	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr9	70856866	70856867	chr9:70856867:T:C	rs34543029	T	C	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	71191890	71191891	chr9:71191891:T:G	rs7850909	T	G	G	Hoxd3.mouse_homeodomain_1	7	1	-	7.595207023573987	3.754707847021919	GGTAATTAAC
chr9	71637479	71637480	chr9:71637480:T:C	rs114670109	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	71771070	71771071	chr9:71771071:C:T	rs117455061	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr9	72015153	72015154	chr9:72015154:T:G	rs956090	T	G	g	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr9	72139377	72139378	chr9:72139378:G:A	rs144191838	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.167074709756593	6.499353943053193	CGTAATTAGC
chr9	72856967	72856968	chr9:72856968:C:T	rs78245652	C	T	-	Hoxd3.mouse_homeodomain_1	23	0	+	0	0	.
chr9	72856968	72856969	chr9:72856969:G:A	rs34664632	G	A	-	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr9	73023060	73023061	chr9:73023061:G:T	rs548142608	G	T	G	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr9	73147703	73147704	chr9:73147704:C:T	rs11789942	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr9	73438479	73438480	chr9:73438480:T:C	rs7045515	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr9	73877141	73877142	chr9:73877142:G:A	rs56720639	G	A	A	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	74290131	74290132	chr9:74290132:C:T	rs3953842	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	74847944	74847945	chr9:74847945:C:G	rs57588830	C	G	C	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr9	75084982	75084983	chr9:75084983:T:C	rs10869495	T	C	t	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	75176625	75176626	chr9:75176626:A:G	rs773006	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr9	75532549	75532550	chr9:75532550:G:C	rs11144473	G	C	G	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr9	75841784	75841785	chr9:75841785:A:G	rs7031123	A	G	A	Hoxd3.mouse_homeodomain_1	0	1	+	7.4444757986496235	7.376359977658197	ACTAATTAGC
chr9	75996484	75996485	chr9:75996485:A:G	rs1340507	A	G	A	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr9	76010318	76010319	chr9:76010319:C:G	rs7875951	C	G	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	76027311	76027312	chr9:76027312:C:T	rs12342299	C	T	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	76293728	76293729	chr9:76293729:T:A	rs10869746	T	A	A	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr9	76690947	76690948	chr9:76690948:G:A	rs579025	G	A	A	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	76713480	76713481	chr9:76713481:T:C	rs12349122	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	76984791	76984792	chr9:76984792:C:T	rs957592	C	T	C	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	76989101	76989102	chr9:76989102:T:G	rs1929538	T	G	G	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	77151031	77151032	chr9:77151032:T:C	rs117230804	T	C	T	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	77171558	77171559	chr9:77171559:C:T	rs17723837	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	78262761	78262762	chr9:78262762:A:G	rs72743773	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr9	78440008	78440009	chr9:78440009:A:T	rs7039065	A	T	A	Hoxd3.mouse_homeodomain_1	2	1	-	7.282386281486299	4.938914338831571	ACTAATTAGG
chr9	78602579	78602580	chr9:78602580:T:C	rs769290	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	78698933	78698934	chr9:78698934:A:G	rs11790800	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	78707245	78707246	chr9:78707246:G:C	rs7044002	G	C	G	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr9	78868895	78868896	chr9:78868896:A:G	rs7028907	A	G	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	78927437	78927438	chr9:78927438:A:G	rs10780275	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	78933383	78933384	chr9:78933384:A:C	rs7033031	A	C	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	79382340	79382341	chr9:79382341:C:A	rs11138180	C	A	C	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	79395820	79395821	chr9:79395821:G:A	rs117059072	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	7.066058952183682	6.770942373013818	CCTAATTAAC
chr9	79571223	79571224	chr9:79571224:C:G	rs73652214	C	G	C	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	79571590	79571591	chr9:79571591:G:A	rs1237469174	G	A	G	Hoxd3.mouse_homeodomain_1	2	1	-	6.962953441130107	7.503391442821062	ACCAATTAAC
chr9	79571605	79571606	chr9:79571606:C:T	rs1290723764	C	T	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	79660917	79660918	chr9:79660918:C:T	rs113408077	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr9	79895394	79895395	chr9:79895395:C:T	rs116722381	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr9	80061758	80061759	chr9:80061759:G:A	rs117147516	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	80062773	80062774	chr9:80062774:A:T	rs62570581	A	T	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	80125808	80125809	chr9:80125809:G:T	rs73653494	G	T	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	80431966	80431967	chr9:80431967:A:G	rs7035967	A	G	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	80673491	80673492	chr9:80673492:G:A	rs79720832	G	A	G	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	80673492	80673493	chr9:80673493:G:A	rs75290178	G	A	G	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	81396284	81396285	chr9:81396285:G:A	rs3930538	G	A	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	81399472	81399473	chr9:81399473:C:T	rs12349479	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr9	81622026	81622027	chr9:81622027:C:T	rs7856380	C	T	T	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	81636345	81636346	chr9:81636346:A:C	rs942601065	A	C	A	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr9	81694032	81694033	chr9:81694033:G:A	rs2796441	G	A	G	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	82128571	82128572	chr9:82128572:G:C	rs555430069	G	C	G	Hoxd3.mouse_homeodomain_1	8	1	-	6.61045689473735	6.995853377711593	GGCAATTACC
chr9	82706922	82706923	chr9:82706923:A:G	rs492860	A	G	G	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	82820468	82820469	chr9:82820469:G:A	rs986486	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	+	0	0	.
chr9	83124882	83124883	chr9:83124883:A:G	chr9:83124883:A:G	A	G	A	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	83367623	83367624	chr9:83367624:T:C	rs7847924	T	C	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	83401178	83401179	chr9:83401179:G:C	rs78091092	G	C	G	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	84289269	84289270	chr9:84289270:G:A	rs4585823	G	A	A	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	84554454	84554455	chr9:84554455:C:T	rs35498966	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	84709706	84709707	chr9:84709707:G:A	rs1778934	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr9	84890617	84890618	chr9:84890618:C:T	rs914801503	C	T	C	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr9	84890618	84890619	chr9:84890619:T:C	rs947547928	T	C	T	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr9	85016396	85016397	chr9:85016397:C:A	chr9:85016397:C:A	C	A	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr9	85246493	85246494	chr9:85246494:C:T	rs12555675	C	T	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	85381055	85381056	chr9:85381056:T:C	rs2814737	T	C	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	86112492	86112493	chr9:86112493:G:A	rs1037551898	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	7.241174800232684	6.573454033529282	GGTAATTAGT
chr9	86354681	86354682	chr9:86354682:C:T	rs538411497	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr9	86354686	86354687	chr9:86354687:C:A	rs552401033	C	A	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	86455276	86455277	chr9:86455277:G:A	rs139082055	G	A	G	Hoxd3.mouse_homeodomain_1	8	1	+	6.466705306321288	6.525620950492726	CCCAATTAGC
chr9	86503490	86503491	chr9:86503491:A:G	rs12002204	A	G	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	87157497	87157498	chr9:87157498:C:A	rs277755	C	A	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	87277771	87277772	chr9:87277772:A:G	rs1888925	A	G	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	87556072	87556073	chr9:87556073:T:G	rs11141879	T	G	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	87649410	87649411	chr9:87649411:A:G	rs3118873	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	87879473	87879474	chr9:87879474:C:T	rs7855131	C	T	-	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr9	88313665	88313666	chr9:88313666:A:G	rs59338559	A	G	A	Hoxd3.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	88584283	88584284	chr9:88584284:T:C	rs112409846	T	C	T	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr9	88805269	88805270	chr9:88805270:A:T	rs9410355	A	T	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr9	89012526	89012527	chr9:89012527:C:G	rs2316282	C	G	C	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	89364158	89364159	chr9:89364159:G:C	rs77132503	G	C	G	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr9	89463602	89463603	chr9:89463603:G:C	rs4877094	G	C	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr9	89474412	89474413	chr9:89474413:G:A	rs12238518	G	A	G	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr9	89495964	89495965	chr9:89495965:G:A	rs34929811	G	A	G	Hoxd3.mouse_homeodomain_1	0	1	+	5.898970685399792	5.967086506391219	GGCCATTAGC
chr9	90032438	90032439	chr9:90032439:C:T	rs636460	C	T	C	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr9	90419141	90419142	chr9:90419142:A:G	rs883922	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr9	91746417	91746418	chr9:91746418:T:C	rs3935601	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	91880094	91880095	chr9:91880095:T:C	rs11795340	T	C	T	Hoxd3.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	91915814	91915815	chr9:91915815:G:A	rs62565747	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	-	6.904037796958669	6.608921217788804	ACCAATTAGC
chr9	92246158	92246159	chr9:92246159:A:G	rs146988806	A	G	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	92276410	92276411	chr9:92276411:G:A	chr9:92276411:G:A	G	A	G	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr9	92276423	92276424	chr9:92276424:T:A	rs17518754	T	A	A	Hoxd3.mouse_homeodomain_1	4	1	-	6.901879681539695	4.774125788824289	AGCAATTAGG
chr9	93387971	93387972	chr9:93387972:G:T	rs12555823	G	T	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	93387989	93387990	chr9:93387990:T:C	rs10739948	T	C	T	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	93435665	93435666	chr9:93435666:A:G	rs191956996	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr9	93635286	93635287	chr9:93635287:T:G	rs77133953	T	G	T	Hoxd3.mouse_homeodomain_1	2	1	+	6.439408687090748	2.5323136289898143	GGTCATTAGC
chr9	93863687	93863688	chr9:93863688:C:G	rs10821240	C	G	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.536291379402548	7.167074709756593	GGTAATTAGC
chr9	93863692	93863693	chr9:93863693:A:C	rs73651930	A	C	A	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	93920328	93920329	chr9:93920329:A:G	rs10821266	A	G	G	Hoxd3.mouse_homeodomain_1	0	1	+	7.501233327402089	7.433117506410662	AGTAATTAAG
chr9	93974421	93974422	chr9:93974422:G:A	rs1933670	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	94212019	94212020	chr9:94212020:C:T	rs16909728	C	T	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr9	94850626	94850627	chr9:94850627:C:T	rs117036042	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.063900836764708	6.396180070061307	CGTAATTAAG
chr9	95048389	95048390	chr9:95048390:A:G	rs529048943	A	G	A	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr9	95080196	95080197	chr9:95080197:T:G	rs17679141	T	G	T	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr9	95242740	95242741	chr9:95242741:A:C	rs549793629	A	C	A	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	95297573	95297574	chr9:95297574:T:G	rs4647376	T	G	G	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	95420707	95420708	chr9:95420708:T:G	rs357554	T	G	G	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	95529570	95529571	chr9:95529571:A:T	rs76597087	A	T	A	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr9	95748855	95748856	chr9:95748856:T:C	rs700965	T	C	C	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr9	95762009	95762010	chr9:95762010:T:C	rs74634741	T	C	T	Hoxd3.mouse_homeodomain_1	17	0	-	0	0	.
chr9	95847872	95847873	chr9:95847873:G:A	rs12343734	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr9	95887884	95887885	chr9:95887885:A:G	rs56063686	A	G	A	Hoxd3.mouse_homeodomain_1	28	0	-	0	0	.
chr9	96449657	96449658	chr9:96449658:A:G	rs79671858	A	G	A	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	96449676	96449677	chr9:96449677:G:A	rs537090981	G	A	G	Hoxd3.mouse_homeodomain_1	9	1	+	6.304615789157963	5.919716107396353	CCCAATTAGG
chr9	97062506	97062507	chr9:97062507:G:A	rs75989705	G	A	G	Hoxd3.mouse_homeodomain_1	22	0	-	0	0	.
chr9	97307537	97307538	chr9:97307538:G:A	rs73559834	G	A	G	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	98143705	98143706	chr9:98143706:T:C	rs774121	T	C	C	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	98476155	98476156	chr9:98476156:T:C	rs16916353	T	C	T	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	98505575	98505576	chr9:98505576:G:A	rs10986472	G	A	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	98537062	98537063	chr9:98537063:C:T	rs7873040	C	T	C	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr9	98790672	98790673	chr9:98790673:T:C	rs7027771	T	C	T	Hoxd3.mouse_homeodomain_1	8	1	-	6.732748102975356	6.6738324588039175	GCCAATTAAG
chr9	98793053	98793054	chr9:98793054:T:C	rs34785870	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	98911316	98911317	chr9:98911317:T:C	rs80131783	T	C	T	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr9	99001350	99001351	chr9:99001351:A:G	rs3780622	A	G	G	Hoxd3.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	99008567	99008568	chr9:99008568:T:A	rs73503723	T	A	T	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	99075501	99075502	chr9:99075502:A:C	rs148068072	A	C	A	Hoxd3.mouse_homeodomain_1	7	1	+	6.279477285346397	2.4389781087943296	GCTCATTAGC
chr9	99075504	99075505	chr9:99075505:G:A	rs78362019	G	A	G	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr9	99170159	99170160	chr9:99170160:G:C	rs61052245	G	C	C	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	99172008	99172009	chr9:99172009:T:C	rs184709725	T	C	T	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr9	99309325	99309326	chr9:99309326:A:G	rs723171	A	G	A	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	99318967	99318968	chr9:99318968:G:A	rs384317	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.892679504719707	6.224958738016306	GGCAATTAAG
chr9	99436925	99436926	chr9:99436926:C:A	rs1482579261	C	A	C	Hoxd3.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	100580522	100580523	chr9:100580523:C:T	rs17742370	C	T	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.732748102975356	7.273186104666311	GCCAATTAAG
chr9	101728358	101728359	chr9:101728359:T:A	rs776239736	T	A	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	101844476	101844477	chr9:101844477:A:C	rs10819999	A	C	A	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	101940812	101940813	chr9:101940813:T:C	rs10760820	T	C	C	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	101940817	101940818	chr9:101940818:C:G	rs111555431	C	G	C	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	102365396	102365397	chr9:102365397:C:G	rs10990041	C	G	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr9	102427092	102427093	chr9:102427093:A:C	rs10990081	A	C	A	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	102830000	102830001	chr9:102830001:T:C	rs843259	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	102959940	102959941	chr9:102959941:C:T	rs4540457	C	T	T	Hoxd3.mouse_homeodomain_1	8	1	+	6.288435975829675	5.938662426129746	GCCAATTACG
chr9	104143526	104143527	chr9:104143527:T:A	rs77250904	T	A	A	Hoxd3.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	104606450	104606451	chr9:104606451:G:C	rs114964366	G	C	G	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr9	104859356	104859357	chr9:104859357:A:G	rs2482420	A	G	G	Hoxd3.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	105069990	105069991	chr9:105069991:G:A	rs3005727	G	A	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr9	106000438	106000439	chr9:106000439:T:C	rs10117207	T	C	C	Hoxd3.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	106883896	106883897	chr9:106883897:A:G	rs183726643	A	G	A	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr9	107221439	107221440	chr9:107221440:G:C	rs13300159	G	C	G	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr9	107703745	107703746	chr9:107703746:T:C	rs78756781	T	C	T	Hoxd3.mouse_homeodomain_1	10	0	+	0	0	.
chr9	107931926	107931927	chr9:107931927:G:T	rs10979110	G	T	G	Hoxd3.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	108041559	108041560	chr9:108041560:A:T	rs116542640	A	T	A	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	108083395	108083396	chr9:108083396:T:C	rs10979192	T	C	t	Hoxd3.mouse_homeodomain_1	12	0	+	0	0	.
chr9	108168656	108168657	chr9:108168657:G:A	rs918673539	G	A	g	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	108168667	108168668	chr9:108168668:A:G	rs139423489	A	G	A	Hoxd3.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	108168688	108168689	chr9:108168689:C:T	rs114327944	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	108600261	108600262	chr9:108600262:T:C	rs1930110	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	108720571	108720572	chr9:108720572:T:C	rs2417934	T	C	T	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr9	108720580	108720581	chr9:108720581:G:T	rs2900472	G	T	T	Hoxd3.mouse_homeodomain_1	29	0	+	0	0	.
chr9	109183264	109183265	chr9:109183265:C:T	rs142871474	C	T	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	109183292	109183293	chr9:109183293:T:C	rs112799892	T	C	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr9	109188784	109188785	chr9:109188785:C:G	rs17729759	C	G	C	Hoxd3.mouse_homeodomain_1	27	0	-	0	0	.
chr9	109477362	109477363	chr9:109477363:C:T	rs75862441	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr9	109525660	109525661	chr9:109525661:T:A	rs4978821	T	A	T	Hoxd3.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	109588884	109588885	chr9:109588885:C:T	rs4978837	C	T	C	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	109998012	109998013	chr9:109998013:G:T	rs12555129	G	T	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	110130955	110130956	chr9:110130956:A:G	rs10980215	A	G	A	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	110889799	110889800	chr9:110889800:T:C	rs7037351	T	C	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr9	111099715	111099716	chr9:111099716:C:T	rs10980761	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	111237119	111237120	chr9:111237120:G:A	rs1610009	G	A	A	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	111987039	111987040	chr9:111987040:C:T	rs2805481	C	T	T	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	112383824	112383825	chr9:112383825:C:T	rs12335731	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	+	6.304615789157963	5.780476367588152	CCCAATTAGG
chr9	112753316	112753317	chr9:112753317:C:T	rs2796035	C	T	T	Hoxd3.mouse_homeodomain_1	0	1	-	6.989302180477614	7.05741800146904	GGTAATTAGA
chr9	113347420	113347421	chr9:113347421:T:A	rs61161242	T	A	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.989302180477614	4.861548287762208	GGTAATTAGA
chr9	113585983	113585984	chr9:113585984:G:A	rs112323557	G	A	G	Hoxd3.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	113633945	113633946	chr9:113633946:T:C	rs11790374	T	C	T	Hoxd3.mouse_homeodomain_1	14	0	+	0	0	.
chr9	113901474	113901475	chr9:113901475:C:T	rs1428979087	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	-	7.433117506410662	7.501233327402089	GGTAATTAAG
chr9	114241471	114241472	chr9:114241472:T:C	rs73656024	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	114305559	114305560	chr9:114305560:G:A	rs74970073	G	A	G	Hoxd3.mouse_homeodomain_1	15	0	-	0	0	.
chr9	114349426	114349427	chr9:114349427:A:G	rs2787346	A	G	A	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	114449487	114449488	chr9:114449488:G:A	rs4979393	G	A	G	Hoxd3.mouse_homeodomain_1	1	1	+	6.241240225091396	5.573519458387995	CGCAATTACC
chr9	114505788	114505789	chr9:114505789:C:T	rs971369544	C	T	C	Hoxd3.mouse_homeodomain_1	17	0	+	0	0	.
chr9	114994335	114994336	chr9:114994336:G:A	rs114503937	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr9	115022873	115022874	chr9:115022874:G:A	rs72758630	G	A	g	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr9	115549218	115549219	chr9:115549219:T:G	rs7046356	T	G	T	Hoxd3.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	115650064	115650065	chr9:115650065:C:T	rs115081116	C	T	C	Hoxd3.mouse_homeodomain_1	0	1	+	6.241240225091396	6.081432723249305	CGCAATTACC
chr9	115783091	115783092	chr9:115783092:C:A	rs7041352	C	A	C	Hoxd3.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	116042234	116042235	chr9:116042235:G:A	rs187954944	G	A	G	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr9	116165257	116165258	chr9:116165258:A:C	rs10983072	A	C	C	Hoxd3.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	116203469	116203470	chr9:116203470:T:A	rs449807	T	A	T	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	116747886	116747887	chr9:116747887:G:A	rs894207	G	A	A	Hoxd3.mouse_homeodomain_1	0	1	-	6.241240225091396	6.081432723249305	CGCAATTACC
chr9	116757308	116757309	chr9:116757309:G:A	rs1372330	G	A	G	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	116789396	116789397	chr9:116789397:A:C	rs192421562	A	C	A	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr9	116870677	116870678	chr9:116870678:C:T	rs115836334	C	T	C	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	117596851	117596852	chr9:117596852:C:T	rs59964545	C	T	C	Hoxd3.mouse_homeodomain_1	19	0	+	0	0	.
chr9	117945346	117945347	chr9:117945347:C:T	rs488101	C	T	T	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr9	118373984	118373985	chr9:118373985:C:T	rs7875275	C	T	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	118466942	118466943	chr9:118466943:A:G	rs71507551	A	G	A	Hoxd3.mouse_homeodomain_1	16	0	-	0	0	.
chr9	119556320	119556321	chr9:119556321:C:A	rs141138996	C	A	C	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr9	119639700	119639701	chr9:119639701:G:A	rs77068602	G	A	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr9	119639700	119639701	chr9:119639701:G:C	chr9:119639701:G:C	G	C	A	Hoxd3.mouse_homeodomain_1	13	0	-	0	0	.
chr9	120921300	120921301	chr9:120921301:C:G	rs1008383	C	G	G	Hoxd3.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	121808123	121808124	chr9:121808124:G:A	rs554971170	G	A	G	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	121850825	121850826	chr9:121850826:A:G	rs4308811	A	G	A	Hoxd3.mouse_homeodomain_1	23	0	-	0	0	.
chr9	122013132	122013133	chr9:122013133:T:C	rs57233960	T	C	C	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	122053967	122053968	chr9:122053968:T:C	rs142932942	T	C	T	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	122063093	122063094	chr9:122063094:C:T	rs7029682	C	T	T	Hoxd3.mouse_homeodomain_1	18	0	-	0	0	.
chr9	122133220	122133221	chr9:122133221:A:G	rs10985546	A	G	A	Hoxd3.mouse_homeodomain_1	21	0	-	0	0	.
chr9	122135070	122135071	chr9:122135071:G:A	rs7864623	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr9	122158865	122158866	chr9:122158866:C:T	chr9:122158866:C:T	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	122158876	122158877	chr9:122158877:A:G	rs16911506	A	G	A	Hoxd3.mouse_homeodomain_1	4	1	+	7.604407200393974	4.744310756833228	AGTAATTAGC
chr9	123064158	123064159	chr9:123064159:G:C	rs1341046100	G	C	G	Hoxd3.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	123292477	123292478	chr9:123292478:A:G	rs12552152	A	G	A	Hoxd3.mouse_homeodomain_1	2	1	-	6.220683642931706	5.680245641240751	GGTAATGAGC
chr9	123395523	123395524	chr9:123395524:G:C	rs555214641	G	C	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr9	123395543	123395544	chr9:123395544:T:C	rs150569560	T	C	T	Hoxd3.mouse_homeodomain_1	4	1	-	6.466705306321288	3.606608862760541	CCCAATTAGC
chr9	123532006	123532007	chr9:123532007:G:A	rs57998416	G	A	G	Hoxd3.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	123569110	123569111	chr9:123569111:G:A	rs111298867	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	123569122	123569123	chr9:123569123:T:C	rs567695425	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	124002374	124002375	chr9:124002375:T:C	rs79165010	T	C	T	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	124172643	124172644	chr9:124172644:C:T	rs10818927	C	T	C	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr9	124228840	124228841	chr9:124228841:C:T	rs55641821	C	T	C	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	124259227	124259228	chr9:124259228:T:C	rs181031388	T	C	T	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	124754404	124754405	chr9:124754405:C:T	rs112421270	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.595207023573987	6.927486256870585	GGTAATTAAC
chr9	124769822	124769823	chr9:124769823:G:T	chr9:124769823:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	24	0	-	0	0	.
chr9	124769845	124769846	chr9:124769846:C:T	rs567832364	C	T	C	Hoxd3.mouse_homeodomain_1	1	1	-	7.0639691987030195	6.396248431999618	AGCAATTAGC
chr9	124850926	124850927	chr9:124850927:C:T	rs10818999	C	T	T	Hoxd3.mouse_homeodomain_1	21	0	+	0	0	.
chr9	125339362	125339363	chr9:125339363:A:G	rs416340	A	G	G	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	125406854	125406855	chr9:125406855:G:T	chr9:125406855:G:T	G	T	G	Hoxd3.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	125406890	125406891	chr9:125406891:G:A	rs34983978	G	A	G	Hoxd3.mouse_homeodomain_1	24	0	+	0	0	.
chr9	125644708	125644709	chr9:125644709:G:C	rs473426	G	C	G	Hoxd3.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	125753052	125753053	chr9:125753053:C:T	rs117949243	C	T	C	Hoxd3.mouse_homeodomain_1	9	1	+	7.0639691987030195	6.768852619533155	AGCAATTAGC
chr9	126123546	126123547	chr9:126123547:G:T	rs10120782	G	T	G	Hoxd3.mouse_homeodomain_1	20	0	+	0	0	.
chr9	126131599	126131600	chr9:126131600:C:T	rs12349159	C	T	C	Hoxd3.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	126342582	126342583	chr9:126342583:T:C	rs10987252	T	C	T	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	126893165	126893166	chr9:126893166:A:C	rs610116	A	C	A	Hoxd3.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	126902859	126902860	chr9:126902860:C:T	rs13293831	C	T	C	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	128117730	128117731	chr9:128117731:A:G	rs79363999	A	G	A	Hoxd3.mouse_homeodomain_1	3	1	+	6.220683642931706	4.2318257410185245	GGTAATGAGC
chr9	128117755	128117756	chr9:128117756:G:A	rs78719155	G	A	G	Hoxd3.mouse_homeodomain_1	28	0	+	0	0	.
chr9	129036509	129036510	chr9:129036510:C:T	rs972386296	C	T	C	Hoxd3.mouse_homeodomain_1	20	0	-	0	0	.
chr9	129036528	129036529	chr9:129036529:G:T	rs1488282183	G	T	G	Hoxd3.mouse_homeodomain_1	1	1	-	6.6738324588039175	6.166043093844867	GCCAATTAGG
chr9	129271518	129271519	chr9:129271519:T:C	rs1106312	T	C	T	Hoxd3.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	129271520	129271521	chr9:129271521:T:A	rs1106311	T	A	A	Hoxd3.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	129274899	129274900	chr9:129274900:C:T	rs7865568	C	T	T	Hoxd3.mouse_homeodomain_1	26	0	-	0	0	.
chr9	129703276	129703277	chr9:129703277:C:T	rs4836667	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	+	0	0	.
chr9	130226130	130226131	chr9:130226131:G:T	rs111416451	G	T	G	Hoxd3.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	130467247	130467248	chr9:130467248:C:T	rs35842179	C	T	C	Hoxd3.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	130481906	130481907	chr9:130481907:G:T	rs480313	G	T	T	Hoxd3.mouse_homeodomain_1	25	0	+	0	0	.
chr9	130835986	130835987	chr9:130835987:T:G	rs138630513	T	G	T	Hoxd3.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	131043774	131043775	chr9:131043775:C:T	rs7869110	C	T	t	Hoxd3.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	131085839	131085840	chr9:131085840:G:A	rs4740214	G	A	G	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	131236004	131236005	chr9:131236005:T:C	rs74721359	T	C	C	Hoxd3.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	131607391	131607392	chr9:131607392:C:T	rs11243451	C	T	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	131697333	131697334	chr9:131697334:C:T	rs116788951	C	T	.	Hoxd3.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	131820272	131820273	chr9:131820273:A:G	rs3012767	A	G	A	Hoxd3.mouse_homeodomain_1	14	0	-	0	0	.
chr9	132183855	132183856	chr9:132183856:T:C	rs760220558	T	C	T	Hoxd3.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	132261127	132261128	chr9:132261128:A:C	rs58201882	A	C	C	Hoxd3.mouse_homeodomain_1	16	0	+	0	0	.
chr9	132591338	132591339	chr9:132591339:T:C	rs11243835	T	C	T	Hoxd3.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	132769851	132769852	chr9:132769852:T:C	rs73659474	T	C	t	Hoxd3.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	132769854	132769855	chr9:132769855:C:T	rs1233864599	C	T	c	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	133142768	133142769	chr9:133142769:T:C	rs11244009	T	C	C	Hoxd3.mouse_homeodomain_1	18	0	+	0	0	.
chr9	133603578	133603579	chr9:133603579:C:T	rs75596189	C	T	C	Hoxd3.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	133659283	133659284	chr9:133659284:T:G	rs148975018	T	G	T	Hoxd3.mouse_homeodomain_1	19	0	-	0	0	.
chr9	133753511	133753512	chr9:133753512:T:C	rs2797827	T	C	C	Hoxd3.mouse_homeodomain_1	12	0	-	0	0	.
chr9	133950676	133950677	chr9:133950677:A:G	rs60641678	A	G	G	Hoxd3.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	133950702	133950703	chr9:133950703:C:T	rs637521	C	T	C	Hoxd3.mouse_homeodomain_1	15	0	+	0	0	.
chr9	134205777	134205778	chr9:134205778:C:T	rs184907199	C	T	C	Hoxd3.mouse_homeodomain_1	11	0	-	0	0	.
chr9	134367925	134367926	chr9:134367926:C:T	rs529316258	C	T	C	Hoxd3.mouse_homeodomain_1	26	0	+	0	0	.
chr9	134489179	134489180	chr9:134489180:A:C	rs34791276	A	C	A	Hoxd3.mouse_homeodomain_1	6	1	-	6.835921975967242	5.5203142394964	GCCAATTAGC
chr9	134503422	134503423	chr9:134503423:C:A	rs62571286	C	A	A	Hoxd3.mouse_homeodomain_1	2	1	+	6.960795325711134	5.157761384747361	AGCAATTAAG
chr9	134603174	134603175	chr9:134603175:A:G	rs534055201	A	G	A	Hoxd3.mouse_homeodomain_1	29	0	-	0	0	.
chr9	134942492	134942493	chr9:134942493:G:A	rs145486550	G	A	G	Hoxd3.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	135011496	135011497	chr9:135011497:C:A	rs964138	C	A	C	Hoxd3.mouse_homeodomain_1	2	1	+	6.901879681539695	5.098845740575922	AGCAATTAGG
chr9	135137672	135137673	chr9:135137673:G:A	rs76802846	G	A	G	Hoxd3.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	135228066	135228067	chr9:135228067:G:T	rs76251060	G	T	G	Hoxd3.mouse_homeodomain_1	27	0	+	0	0	.
chr9	135493329	135493330	chr9:135493330:G:A	rs11103039	G	A	A	Hoxd3.mouse_homeodomain_1	22	0	+	0	0	.
chr9	136312521	136312522	chr9:136312522:C:T	rs892870590	C	T	C	Hoxd3.mouse_homeodomain_1	-14	0	-	0	0	.