chr1	631535	631536	chr1:631536:A:G	rs3949348	A	G	.	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	631552	631553	chr1:631553:A:G	rs113120793	A	G	.	Hoxc9_MA0485.1	0	1	+	8.15684316045369	8.689658293744692	AGCCATCAATTTC
chr1	634797	634798	chr1:634798:G:A	rs9326626	G	A	.	Hoxc9_MA0485.1	1	1	+	7.766946668518533	6.20750309460847	GGGTATCAATCAC
chr1	921176	921177	chr1:921177:A:C	rs147866846	A	C	a	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	921202	921203	chr1:921203:G:A	rs141671872	G	A	g	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	940255	940256	chr1:940256:C:T	rs556157869	C	T	c	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	940259	940260	chr1:940260:C:G	rs868326972	C	G	c	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	940262	940263	chr1:940263:C:G	rs7411115	C	G	c	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	940345	940346	chr1:940346:T:A	rs1231732072	T	A	-	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	1068950	1068951	chr1:1068951:C:T	rs113592356	C	T	c	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	1101666	1101667	chr1:1101667:C:T	rs12134754	C	T	-	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	1577773	1577774	chr1:1577774:G:T	rs76878727	G	T	G	Hoxc9_MA0485.1	6	1	-	10.041721877832162	12.215053173163144	TGCCATCAATCAT
chr1	1577902	1577903	chr1:1577903:A:G	rs144752615	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	1577905	1577906	chr1:1577906:A:G	rs148503044	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	1741060	1741061	chr1:1741061:G:T	rs1476428355	G	T	-	Hoxc9_MA0485.1	1	1	-	8.276448055348489	7.855964962770102	GCCTGTAAATCCC
chr1	1776300	1776301	chr1:1776301:T:G	rs12041925	T	G	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	1868924	1868925	chr1:1868925:C:T	rs56044478	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr1	1994838	1994839	chr1:1994839:A:T	rs6667687	A	T	A	Hoxc9_MA0485.1	11	1	-	8.996079442864545	9.853668828073568	AACAATAAATCTA
chr1	2354968	2354969	chr1:2354969:C:T	rs2840531	C	T	C	Hoxc9_MA0485.1	4	1	-	7.713013318338481	8.880777032330062	AGCCGTAAATTCT
chr1	2402821	2402822	chr1:2402822:G:T	rs72642191	G	T	g	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	2472918	2472919	chr1:2472919:C:T	rs183822931	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	2531378	2531379	chr1:2531379:T:C	rs2494603	T	C	.	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	2531395	2531396	chr1:2531396:A:G	rs10910087	A	G	.	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	2541698	2541699	chr1:2541699:C:T	rs374224216	C	T	.	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	3155917	3155918	chr1:3155918:T:A	rs10797381	T	A	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	3169899	3169900	chr1:3169900:G:A	rs7518255	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	3251715	3251716	chr1:3251716:A:G	rs10797386	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	3275173	3275174	chr1:3275174:A:G	rs2455130	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	3293740	3293741	chr1:3293741:T:A	rs12565882	T	A	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr1	3313912	3313913	chr1:3313913:T:C	rs12741836	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	3334728	3334729	chr1:3334729:C:T	rs2483276	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	3334759	3334760	chr1:3334760:G:T	rs2483277	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	3365671	3365672	chr1:3365672:C:G	rs935645603	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	3404035	3404036	chr1:3404036:G:A	rs113511153	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	3558518	3558519	chr1:3558519:C:T	rs2821062	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	3950828	3950829	chr1:3950829:C:T	rs6426385	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	4010991	4010992	chr1:4010992:C:T	rs6664533	C	T	C	Hoxc9_MA0485.1	1	1	-	7.3674910323560345	5.808047458445972	CGGCATCAATCAC
chr1	4032610	4032611	chr1:4032611:T:G	rs4520388	T	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	4034007	4034008	chr1:4034008:C:T	rs12137595	C	T	C	Hoxc9_MA0485.1	10	1	+	10.624662255830893	8.820826351522141	GGCTGTAAATCAA
chr1	4227331	4227332	chr1:4227332:G:A	rs112629950	G	A	G	Hoxc9_MA0485.1	0	1	+	8.585185971119849	8.05237083782885	GGCCATAAAACTT
chr1	4371203	4371204	chr1:4371204:A:C	rs572439	A	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	4371237	4371238	chr1:4371238:G:A	rs572343	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	4573624	4573625	chr1:4573625:G:A	rs7527742	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	4585994	4585995	chr1:4585995:A:G	rs617610	A	G	G	Hoxc9_MA0485.1	4	1	+	8.484444923984029	7.3166812099924465	CGCCATGAATCAG
chr1	4586012	4586013	chr1:4586013:C:A	rs561468	C	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	4666721	4666722	chr1:4666722:T:C	rs113276583	T	C	c	Hoxc9_MA0485.1	3	1	+	7.295232143738148	8.183484916760772	GCCTGTGAATCAC
chr1	4666786	4666787	chr1:4666787:G:A	rs11584497	G	A	g	Hoxc9_MA0485.1	4	1	+	8.183484916760772	9.351248630752357	GCCCGTGAATCAC
chr1	4666837	4666838	chr1:4666838:C:T	rs113348625	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	4666838	4666839	chr1:4666839:A:G	rs10799254	A	G	a	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	4666932	4666933	chr1:4666933:C:T	rs114168592	C	T	c	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	4666964	4666965	chr1:4666965:C:T	rs144096630	C	T	c	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	4666965	4666966	chr1:4666966:A:G	rs12137092	A	G	g	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	4667025	4667026	chr1:4667026:C:T	rs6658098	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	4703210	4703211	chr1:4703211:C:T	rs115951945	C	T	C	Hoxc9_MA0485.1	6	1	-	8.789630264801444	11.823836031310865	AGCCGTGAATCAC
chr1	4880798	4880799	chr1:4880799:G:A	rs116502771	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	4880824	4880825	chr1:4880825:G:A	rs12091403	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	4951249	4951250	chr1:4951250:G:A	rs12411011	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	5198495	5198496	chr1:5198496:T:C	rs2722782	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	5247705	5247706	chr1:5247706:C:T	rs6704207	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	5455374	5455375	chr1:5455375:A:G	rs145694322	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	5531541	5531542	chr1:5531542:A:G	rs1342690	A	G	A	Hoxc9_MA0485.1	12	1	+	10.588420035644038	10.714100392477508	AACCATAAATCAA
chr1	5722660	5722661	chr1:5722661:G:A	rs10907212	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	5722666	5722667	chr1:5722667:G:A	rs79895490	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	5722708	5722709	chr1:5722709:T:C	rs2649086	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	5726804	5726805	chr1:5726805:C:T	rs11260678	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	5754074	5754075	chr1:5754075:G:A	rs17429690	G	A	G	Hoxc9_MA0485.1	3	1	-	8.374789956611226	7.486537183588603	TTCCGTAAATCAA
chr1	5754093	5754094	chr1:5754094:A:G	rs12060804	A	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	5978828	5978829	chr1:5978829:T:G	rs35766174	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	5978851	5978852	chr1:5978852:G:T	rs4908641	G	T	T	Hoxc9_MA0485.1	4	1	+	7.988926005436132	5.488074477111117	TCACGTAAATCAT
chr1	6212752	6212753	chr1:6212753:C:T	rs2294711	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	6256823	6256824	chr1:6256824:G:C	rs2057006	G	C	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	6256833	6256834	chr1:6256834:G:A	rs113555267	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	6645295	6645296	chr1:6645296:A:G	rs200457	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	7246390	7246391	chr1:7246391:A:G	rs6577426	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	7643678	7643679	chr1:7643679:A:G	chr1:7643679:A:G	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	7691328	7691329	chr1:7691329:G:A	rs4908475	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	7703865	7703866	chr1:7703866:C:T	rs144681097	C	T	C	Hoxc9_MA0485.1	0	1	-	6.986113661055884	6.453298527764883	GGCCACAAATCCC
chr1	7752748	7752749	chr1:7752749:A:G	rs150456270	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	7752779	7752780	chr1:7752780:A:C	rs4908480	A	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	7797913	7797914	chr1:7797914:C:T	rs228685	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	7868291	7868292	chr1:7868292:G:C	rs753380	G	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	7954808	7954809	chr1:7954809:G:T	chr1:7954809:G:T	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	8025611	8025612	chr1:8025612:T:C	rs75083672	T	C	T	Hoxc9_MA0485.1	8	1	-	8.377888741315557	1.4759302311805989	ACCCGTAAATCCT
chr1	8091163	8091164	chr1:8091164:G:A	rs11121086	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	8153417	8153418	chr1:8153418:G:A	rs184540824	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	8153449	8153450	chr1:8153450:A:G	rs4908740	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	8408643	8408644	chr1:8408644:C:T	rs546074142	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	8526043	8526044	chr1:8526044:C:T	rs151028640	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	8818593	8818594	chr1:8818594:A:C	rs1161508060	A	C	A	Hoxc9_MA0485.1	0	1	-	9.272256787522718	10.327621539188472	TCCCATAAATTAT
chr1	8822701	8822702	chr1:8822702:T:C	rs74050296	T	C	C	Hoxc9_MA0485.1	6	1	-	8.559044011782062	5.524838245272644	TCCCATAAATCCG
chr1	8880361	8880362	chr1:8880362:C:T	chr1:8880362:C:T	C	T	C	Hoxc9_MA0485.1	2	1	+	8.24879882145135	6.871780344290127	ACCAGTAAATCTA
chr1	8898399	8898400	chr1:8898400:T:C	rs58097568	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	8938464	8938465	chr1:8938465:C:T	rs145276910	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	8943988	8943989	chr1:8943989:G:A	rs61497143	G	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	9084571	9084572	chr1:9084572:C:G	rs767994344	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	9110793	9110794	chr1:9110794:A:G	rs548678748	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	9200840	9200841	chr1:9200841:A:C	rs743973	A	C	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	9284355	9284356	chr1:9284356:C:G	rs11803236	C	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	9289222	9289223	chr1:9289223:A:C	rs186459348	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	9340282	9340283	chr1:9340283:G:A	rs529269343	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	9376086	9376087	chr1:9376087:G:A	rs114375236	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	9389039	9389040	chr1:9389040:A:G	rs9659656	A	G	G	Hoxc9_MA0485.1	9	1	-	9.565676556524691	2.677450742151061	CACCATAAATCTT
chr1	9412989	9412990	chr1:9412990:G:A	rs74051673	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	9413020	9413021	chr1:9413021:T:C	chr1:9413021:T:C	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	9453106	9453107	chr1:9453107:G:A	rs9662976	G	A	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	9775558	9775559	chr1:9775559:A:C	rs4845976	A	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	9784620	9784621	chr1:9784621:T:C	rs541555580	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	10827865	10827866	chr1:10827866:C:T	rs539790	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	10890668	10890669	chr1:10890669:C:G	rs7536814	C	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	11076780	11076781	chr1:11076781:A:G	rs17036297	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	11107771	11107772	chr1:11107772:C:T	rs12117241	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	11236996	11236997	chr1:11236997:G:T	rs143312192	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	11300899	11300900	chr1:11300900:A:G	rs2744815	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	11357704	11357705	chr1:11357705:G:A	rs2788550	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	11496290	11496291	chr1:11496291:A:G	rs10864512	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	11506126	11506127	chr1:11506127:T:C	rs6702624	T	C	T	Hoxc9_MA0485.1	9	1	+	10.356812052605667	3.468586238232037	GGCTGTAAATCTT
chr1	11665045	11665046	chr1:11665046:T:G	rs72638621	T	G	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	11746239	11746240	chr1:11746240:G:A	rs373818440	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	11784679	11784680	chr1:11784680:A:G	rs55890341	A	G	G	Hoxc9_MA0485.1	5	1	-	8.153558074484277	3.6682467118457884	AGCCATGAATTAC
chr1	11788914	11788915	chr1:11788915:G:A	rs72640221	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	12435964	12435965	chr1:12435965:T:C	rs6541023	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	12580052	12580053	chr1:12580053:T:C	rs12128227	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	12580098	12580099	chr1:12580099:A:G	rs3128458	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	12599031	12599032	chr1:12599032:C:T	rs150526729	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	12599048	12599049	chr1:12599049:G:A	rs55636637	G	A	G	Hoxc9_MA0485.1	12	1	-	9.63781865370816	9.383821699943608	GTCCATAAATTAC
chr1	12603768	12603769	chr1:12603769:C:T	rs4846127	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	13231625	13231626	chr1:13231626:C:T	rs564001048	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	13704547	13704548	chr1:13704548:T:G	rs3806425	T	G	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	13708794	13708795	chr1:13708795:G:A	rs141008778	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	13728407	13728408	chr1:13728408:A:G	rs10489152	A	G	G	Hoxc9_MA0485.1	8	1	+	7.649923109794986	0.7479645996600268	GCCCATGAATCTA
chr1	14115242	14115243	chr1:14115243:G:A	rs10928016	G	A	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	14246727	14246728	chr1:14246728:C:G	rs78064914	C	G	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	14262793	14262794	chr1:14262794:C:T	rs774003296	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	14419898	14419899	chr1:14419899:G:A	rs535008170	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	14419910	14419911	chr1:14419911:T:C	rs79414274	T	C	T	Hoxc9_MA0485.1	8	1	-	9.681309064458146	2.7793505543231882	TGCAATAAATCCC
chr1	14487072	14487073	chr1:14487073:G:A	rs188629624	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	14525320	14525321	chr1:14525321:A:G	rs77080357	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	14670445	14670446	chr1:14670446:G:A	rs12741614	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	15011738	15011739	chr1:15011739:C:T	rs72639822	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	15161663	15161664	chr1:15161664:C:A	rs12041096	C	A	c	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	15187663	15187664	chr1:15187664:A:G	rs10927706	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	15226178	15226179	chr1:15226179:A:G	rs12125223	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	15246940	15246941	chr1:15246941:C:T	rs774506165	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	15542788	15542789	chr1:15542789:G:A	rs12736181	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr1	15662382	15662383	chr1:15662383:A:G	rs41270279	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	15700802	15700803	chr1:15700803:C:T	rs16851962	C	T	C	Hoxc9_MA0485.1	1	1	-	9.56096439601067	8.001520822100607	AGGAATAAATCAC
chr1	15886958	15886959	chr1:15886959:G:T	rs186919541	G	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	16386534	16386535	chr1:16386535:G:C	rs74055648	G	C	G	Hoxc9_MA0485.1	6	1	-	7.985322459902345	7.124447988723906	TGCAATCAATCTG
chr1	16519104	16519105	chr1:16519105:G:A	rs156912	G	A	.	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	16602833	16602834	chr1:16602834:G:A	rs574897224	G	A	.	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	16885261	16885262	chr1:16885262:G:C	rs112183662	G	C	.	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	16909890	16909891	chr1:16909891:A:C	rs79678917	A	C	.	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	17066455	17066456	chr1:17066456:C:T	rs2746534	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	17141470	17141471	chr1:17141471:G:A	rs78634581	G	A	G	Hoxc9_MA0485.1	2	1	-	8.837388475789588	7.460369998628365	TGCTGTAAATCTG
chr1	17183742	17183743	chr1:17183743:A:G	rs2977232	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	17733768	17733769	chr1:17733769:C:T	rs11584149	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	17799795	17799796	chr1:17799796:T:C	rs72648490	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	17806269	17806270	chr1:17806270:G:T	rs634658	G	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	17846503	17846504	chr1:17846504:G:T	rs58538859	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	17908196	17908197	chr1:17908197:C:T	rs11203230	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	18221381	18221382	chr1:18221382:C:G	rs11260959	C	G	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	18377177	18377178	chr1:18377178:G:A	rs2271861	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	18541698	18541699	chr1:18541699:T:A	rs11261030	T	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	18599337	18599338	chr1:18599338:G:A	rs113478438	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	18676372	18676373	chr1:18676373:G:A	rs2236829	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	19070734	19070735	chr1:19070735:A:G	rs72649592	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	19080822	19080823	chr1:19080823:T:C	rs79103880	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	19209871	19209872	chr1:19209872:A:C	rs534765103	A	C	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	19449359	19449360	chr1:19449360:A:C	rs150890329	A	C	A	Hoxc9_MA0485.1	8	1	+	6.730677930275426	1.880275758330765	GCCAGTGAATCAG
chr1	19464591	19464592	chr1:19464592:C:A	rs4481878	C	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	19864942	19864943	chr1:19864943:T:C	rs4654897	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	19927600	19927601	chr1:19927601:C:T	chr1:19927601:C:T	C	T	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	19968032	19968033	chr1:19968033:T:G	rs144913799	T	G	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	20365369	20365370	chr1:20365370:G:A	rs11809282	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	20410370	20410371	chr1:20410371:C:A	rs12131811	C	A	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	20520242	20520243	chr1:20520243:G:A	rs1815542	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	20589518	20589519	chr1:20589519:G:A	rs12731069	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	20589534	20589535	chr1:20589535:G:A	rs116157205	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	20710444	20710445	chr1:20710445:A:T	rs116155519	A	T	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	20956330	20956331	chr1:20956331:G:A	rs36082446	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	20982339	20982340	chr1:20982340:A:G	rs141252735	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	21089941	21089942	chr1:21089942:G:T	rs960564	G	T	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	21162116	21162117	chr1:21162117:G:A	rs6671056	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	21453904	21453905	chr1:21453905:A:G	rs576703729	A	G	.	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	21513635	21513636	chr1:21513636:G:A	rs869179	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	21542056	21542057	chr1:21542057:A:C	rs539472305	A	C	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	21818719	21818720	chr1:21818720:C:A	rs67187520	C	A	c	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	21897608	21897609	chr1:21897609:A:G	rs11810496	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	22218066	22218067	chr1:22218067:C:G	rs138407610	C	G	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	22252330	22252331	chr1:22252331:G:A	rs2473272	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	22342277	22342278	chr1:22342278:C:T	rs4655048	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	22662503	22662504	chr1:22662504:G:A	rs1014080220	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	22739839	22739840	chr1:22739840:C:G	rs140727882	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	22756587	22756588	chr1:22756588:G:C	rs575757968	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	22848616	22848617	chr1:22848617:G:A	rs74061052	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	22964270	22964271	chr1:22964271:T:G	rs138747463	T	G	t	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	23177666	23177667	chr1:23177667:C:A	rs962986492	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	23980808	23980809	chr1:23980809:G:A	rs7525834	G	A	G	Hoxc9_MA0485.1	11	1	-	8.628596449624606	9.823996919314665	AGCTGTAAATCCT
chr1	24009550	24009551	chr1:24009551:T:A	rs2501376	T	A	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	24009598	24009599	chr1:24009599:T:C	rs2501377	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	24311080	24311081	chr1:24311081:G:A	rs56144841	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	24329089	24329090	chr1:24329090:A:G	rs72878812	A	G	A	Hoxc9_MA0485.1	3	1	-	10.737061218156724	11.625313991179347	TGCTATAAATCAA
chr1	24450480	24450481	chr1:24450481:T:C	rs4648990	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	24451969	24451970	chr1:24451970:C:T	rs139466678	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	24541290	24541291	chr1:24541291:G:T	rs196423	G	T	T	Hoxc9_MA0485.1	0	1	-	8.552074166351998	9.306967442246117	CGGAATAAATCAT
chr1	24722369	24722370	chr1:24722370:C:T	rs112616775	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	24853829	24853830	chr1:24853830:G:A	rs7526415	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	24889539	24889540	chr1:24889540:A:G	rs7513064	A	G	A	Hoxc9_MA0485.1	7	1	+	9.565676556524691	2.6614474873191147	CACCATAAATCTT
chr1	24889554	24889555	chr1:24889555:A:G	rs7513066	A	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	24991733	24991734	chr1:24991734:G:T	rs186127900	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr1	25117787	25117788	chr1:25117788:T:C	rs11248981	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	25641282	25641283	chr1:25641283:A:G	rs3767909	A	G	a	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	25650087	25650088	chr1:25650088:A:G	rs59178479	A	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	25660030	25660031	chr1:25660031:T:C	rs2982309	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	25771416	25771417	chr1:25771417:C:T	rs142949994	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	25843659	25843660	chr1:25843660:C:T	rs169934	C	T	c	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	26165601	26165602	chr1:26165602:T:G	rs529132757	T	G	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	26372130	26372131	chr1:26372131:G:C	rs11247935	G	C	C	Hoxc9_MA0485.1	12	1	+	9.242623285847563	9.960679064762441	AGCCATCAATCTG
chr1	26375361	26375362	chr1:26375362:C:G	rs4659438	C	G	C	Hoxc9_MA0485.1	0	1	+	8.818395935111496	10.106104344296618	CCCCGTAAATCTT
chr1	26482910	26482911	chr1:26482911:A:G	rs61789102	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	26619674	26619675	chr1:26619675:A:G	rs77111432	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	26726120	26726121	chr1:26726121:T:C	rs35145624	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	26828723	26828724	chr1:26828724:A:G	rs908597023	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	26828765	26828766	chr1:26828766:C:T	rs77743440	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	26921074	26921075	chr1:26921075:T:C	rs78581866	T	C	T	Hoxc9_MA0485.1	4	1	-	7.842503767638783	6.6747400536471995	TGCAATGAATCTC
chr1	27058343	27058344	chr1:27058344:T:C	rs11805964	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	27297256	27297257	chr1:27297257:C:T	rs17162531	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	27460180	27460181	chr1:27460181:C:A	rs6691276	C	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	28056555	28056556	chr1:28056556:A:G	rs12406786	A	G	A	Hoxc9_MA0485.1	11	1	+	9.984794601123792	5.572261202255423	GGGCATAAATCAA
chr1	28066131	28066132	chr1:28066132:T:C	rs919321352	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	28096971	28096972	chr1:28096972:C:T	rs11582538	C	T	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	28240989	28240990	chr1:28240990:A:G	rs526050	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	28251873	28251874	chr1:28251874:C:T	rs150995894	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	28297305	28297306	chr1:28297306:G:A	rs10127666	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	28915632	28915633	chr1:28915633:A:C	rs981152295	A	C	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	29050314	29050315	chr1:29050315:A:G	rs569977197	A	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	29136707	29136708	chr1:29136708:C:T	rs966393119	C	T	C	Hoxc9_MA0485.1	0	1	-	6.625871902873855	6.093056769582852	GGCCAGAAATCAC
chr1	29147118	29147119	chr1:29147119:G:A	rs114296365	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	29753641	29753642	chr1:29753642:T:C	rs35248904	T	C	.	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	29753684	29753685	chr1:29753685:C:T	rs17341169	C	T	.	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	29782699	29782700	chr1:29782700:T:C	rs16832903	T	C	.	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	30060001	30060002	chr1:30060002:T:G	rs419527	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	30073378	30073379	chr1:30073379:T:C	rs904298	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	30199091	30199092	chr1:30199092:G:A	rs138282572	G	A	G	Hoxc9_MA0485.1	4	1	+	6.949285131863108	8.117048845854692	GCTCGTCAATCAG
chr1	30199105	30199106	chr1:30199106:G:A	rs6676528	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	30207709	30207710	chr1:30207710:C:T	rs12405559	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	30214339	30214340	chr1:30214340:G:A	rs16833399	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	30321289	30321290	chr1:30321290:T:G	rs568325787	T	G	T	Hoxc9_MA0485.1	0	1	-	8.434731729963227	7.679838454069107	AGCTTTAAATCAC
chr1	30338094	30338095	chr1:30338095:G:A	rs437628	G	A	.	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	30380668	30380669	chr1:30380669:G:A	rs12094268	G	A	.	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	30380669	30380670	chr1:30380670:A:G	rs12059294	A	G	.	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	30451264	30451265	chr1:30451265:C:T	rs10915117	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	30664542	30664543	chr1:30664543:T:C	rs1188430	T	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	30665941	30665942	chr1:30665942:C:T	rs56166286	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	30687630	30687631	chr1:30687631:T:C	rs1188449	T	C	T	Hoxc9_MA0485.1	9	1	+	8.961252189724913	2.0730263753512803	ACCCATCAATCAG
chr1	30885939	30885940	chr1:30885940:G:A	rs72657252	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	31224436	31224437	chr1:31224437:A:G	rs2377732	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	31444973	31444974	chr1:31444974:T:C	rs2889750	T	C	C	Hoxc9_MA0485.1	3	1	+	7.3788278734040675	8.267080646426692	TGCTGTGAATCAC
chr1	31480153	31480154	chr1:31480154:G:A	rs114619523	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	31582030	31582031	chr1:31582031:G:T	rs945213	G	T	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	31782628	31782629	chr1:31782629:C:G	rs79470841	C	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	32441336	32441337	chr1:32441337:G:T	rs114288963	G	T	g	Hoxc9_MA0485.1	10	1	-	9.023102836932388	6.339102503058441	TCCCATAAATCCT
chr1	32940370	32940371	chr1:32940371:A:C	rs194641	A	C	A	Hoxc9_MA0485.1	9	1	-	8.156106614916586	1.2678808005429532	GCCTGTCAATCAC
chr1	32949061	32949062	chr1:32949062:T:C	rs67811792	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	33443875	33443876	chr1:33443876:A:G	rs7519108	A	G	G	Hoxc9_MA0485.1	2	1	-	7.601698054017322	8.978716531178545	GGTCATAAAACAG
chr1	33503666	33503667	chr1:33503667:T:C	rs12047859	T	C	T	Hoxc9_MA0485.1	7	1	-	7.491231191939508	0.587002122733929	GGCTGTCAATTAC
chr1	33829272	33829273	chr1:33829273:T:C	rs10914789	T	C	C	Hoxc9_MA0485.1	4	1	-	8.961252189724913	7.793488475733329	ACCCATCAATCAG
chr1	33876797	33876798	chr1:33876798:T:G	rs6425854	T	G	T	Hoxc9_MA0485.1	6	1	-	9.121048428706384	6.9477171333753995	GGCATTAAATCAC
chr1	33930654	33930655	chr1:33930655:A:G	rs10799010	A	G	G	Hoxc9_MA0485.1	8	1	+	9.002671732000552	2.1007132218655933	CCTCATAAATCAG
chr1	34019694	34019695	chr1:34019695:G:T	rs4653374	G	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	34019700	34019701	chr1:34019701:A:G	rs4653375	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	34283152	34283153	chr1:34283153:C:A	rs9661105	C	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	34363509	34363510	chr1:34363510:T:C	rs74770393	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	34373053	34373054	chr1:34373054:A:G	rs77997946	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr1	34416517	34416518	chr1:34416518:C:G	rs12116584	C	G	C	Hoxc9_MA0485.1	12	1	+	8.086967375860299	7.368911596945422	ACCAATCAATCTC
chr1	34648666	34648667	chr1:34648667:G:A	rs12036748	G	A	G	Hoxc9_MA0485.1	0	1	+	7.951622000204808	7.418806866913806	GGCAATGAATTAC
chr1	34648687	34648688	chr1:34648688:A:G	rs4652852	A	G	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	34652538	34652539	chr1:34652539:C:A	rs6425908	C	A	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	34888128	34888129	chr1:34888129:T:C	rs563622396	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	34888129	34888130	chr1:34888130:C:T	rs201687625	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	34975153	34975154	chr1:34975154:A:G	rs10158282	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	35193675	35193676	chr1:35193676:G:A	rs74555407	G	A	G	Hoxc9_MA0485.1	10	1	-	8.599210181323265	6.795374277014514	TACAATAAATCTG
chr1	35288923	35288924	chr1:35288924:T:A	rs12059022	T	A	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	35881972	35881973	chr1:35881973:A:G	rs11584005	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	36227604	36227605	chr1:36227605:G:A	rs573361596	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	36677549	36677550	chr1:36677550:G:A	rs11263935	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	36678130	36678131	chr1:36678131:C:T	rs1395457	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	36696750	36696751	chr1:36696751:A:G	rs589249	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	36755911	36755912	chr1:36755912:G:T	rs61771398	G	T	G	Hoxc9_MA0485.1	0	1	+	9.359655338962677	8.304290587296922	GGTAATAAATCCC
chr1	36777141	36777142	chr1:36777142:G:A	rs490647	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	37186669	37186670	chr1:37186670:A:G	rs7529844	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	37287105	37287106	chr1:37287106:G:A	rs12041233	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	37406455	37406456	chr1:37406456:G:A	rs2745475	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	37526600	37526601	chr1:37526601:T:C	rs72657782	T	C	T	Hoxc9_MA0485.1	12	1	+	9.180847406653724	9.434844360418277	TGCCATGAATCAT
chr1	37692087	37692088	chr1:37692088:A:C	rs1204235992	A	C	A	Hoxc9_MA0485.1	3	1	+	7.591552401453863	8.326303609024333	GCCAGTCAATCAG
chr1	37697259	37697260	chr1:37697260:C:T	rs60258705	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	37928184	37928185	chr1:37928185:T:C	rs78884460	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	38030200	38030201	chr1:38030201:G:C	rs770016346	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	38213873	38213874	chr1:38213874:C:G	rs16824769	C	G	C	Hoxc9_MA0485.1	10	1	+	7.4737968800973515	2.672726072350074	CGCTATCAATCTA
chr1	38273821	38273822	chr1:38273822:T:A	rs1329972	T	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	38339658	38339659	chr1:38339659:A:T	rs66577509	A	T	A	Hoxc9_MA0485.1	9	1	-	8.57409122564969	4.746448657149664	GGACATCAATCTC
chr1	38786731	38786732	chr1:38786732:T:C	rs1005766534	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	38947563	38947564	chr1:38947564:T:C	rs11205448	T	C	C	Hoxc9_MA0485.1	4	1	-	9.614742156145025	8.446978442153442	AGTTATAAATCTT
chr1	39062087	39062088	chr1:39062088:G:A	rs7364654	G	A	g	Hoxc9_MA0485.1	1	1	+	7.261509837071716	5.702066263161654	AGGCATGAATCAC
chr1	39145148	39145149	chr1:39145149:G:C	rs114911343	G	C	G	Hoxc9_MA0485.1	1	1	-	9.43279075597665	10.571751237308323	GCTCATAAATCTG
chr1	39184096	39184097	chr1:39184097:A:G	rs35443599	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	39233571	39233572	chr1:39233572:C:T	rs10888715	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	39359045	39359046	chr1:39359046:C:G	rs2256614	C	G	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	39399030	39399031	chr1:39399031:T:G	rs144100328	T	G	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	39453561	39453562	chr1:39453562:A:G	rs687848	A	G	A	Hoxc9_MA0485.1	4	1	+	9.785049793053748	8.617286079062163	TGCCATAAATAAC
chr1	39567086	39567087	chr1:39567087:T:C	rs145838093	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	39632602	39632603	chr1:39632603:T:C	rs376987120	T	C	T	Hoxc9_MA0485.1	4	1	-	7.381854505519195	6.214090791527611	TGCCATGAATCCC
chr1	39681257	39681258	chr1:39681258:G:A	rs17501838	G	A	G	Hoxc9_MA0485.1	0	1	+	9.383821699943608	8.851006566652606	GTCCATAAATTAT
chr1	39845819	39845820	chr1:39845820:G:A	rs138346071	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	39892834	39892835	chr1:39892835:A:G	rs193236481	A	G	A	Hoxc9_MA0485.1	4	1	+	9.72006815233669	8.552304438345107	GGTCATCAATCAT
chr1	40107823	40107824	chr1:40107824:A:C	chr1:40107824:A:C	A	C	A	Hoxc9_MA0485.1	7	1	+	7.294969530397774	0.39074046119219524	GGCTATGAATCCT
chr1	40161938	40161939	chr1:40161939:C:T	rs548241176	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	40338873	40338874	chr1:40338874:T:G	chr1:40338874:T:G	T	G	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	40385696	40385697	chr1:40385697:C:T	rs76716252	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	40385731	40385732	chr1:40385732:C:A	chr1:40385732:C:A	C	A	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	40862971	40862972	chr1:40862972:G:A	rs41268099	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	40981687	40981688	chr1:40981688:A:G	rs540143177	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	40981693	40981694	chr1:40981694:G:A	rs16827810	G	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	41327361	41327362	chr1:41327362:C:T	rs12403489	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	41715260	41715261	chr1:41715261:G:A	rs79995308	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	41733107	41733108	chr1:41733108:T:C	rs7526787	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	41812092	41812093	chr1:41812093:T:C	rs147993404	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	41812109	41812110	chr1:41812110:T:A	rs616366	T	A	t	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	41814582	41814583	chr1:41814583:G:A	rs6670547	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	41891140	41891141	chr1:41891141:A:C	rs12059980	A	C	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	41898294	41898295	chr1:41898295:G:A	rs1886729	G	A	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	41918119	41918120	chr1:41918120:C:T	rs529605372	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	41918142	41918143	chr1:41918143:C:G	rs11588703	C	G	C	Hoxc9_MA0485.1	4	1	-	6.348475246217899	2.3783122789598234	GCGCGTCAATCAC
chr1	41958436	41958437	chr1:41958437:T:C	rs644311	T	C	C	Hoxc9_MA0485.1	5	1	+	9.823996919314665	5.3386855566761815	AGCTGTAAATCTT
chr1	42361731	42361732	chr1:42361732:T:G	rs17377905	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	42645720	42645721	chr1:42645721:A:C	rs781398415	A	C	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	42887222	42887223	chr1:42887223:C:T	rs6600427	C	T	.	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	42916344	42916345	chr1:42916345:G:A	rs12140825	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	42937329	42937330	chr1:42937330:G:C	rs142471809	G	C	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	42953481	42953482	chr1:42953482:A:T	rs1017454043	A	T	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	42957348	42957349	chr1:42957349:G:A	rs2200299	G	A	G	Hoxc9_MA0485.1	2	1	-	8.01211343407848	6.635094956917257	ATCCATAAATCCA
chr1	43110531	43110532	chr1:43110532:C:T	rs634387	C	T	t	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	43438023	43438024	chr1:43438024:A:G	rs2842182	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	43648766	43648767	chr1:43648767:C:A	rs72883038	C	A	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	44012538	44012539	chr1:44012539:T:G	rs115391525	T	G	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	44039457	44039458	chr1:44039458:T:A	rs58283107	T	A	T	Hoxc9_MA0485.1	5	1	+	7.261509837071716	0.3629668613521217	AGGCATGAATCAC
chr1	44588087	44588088	chr1:44588088:G:T	rs928685	G	T	G	Hoxc9_MA0485.1	6	1	+	9.097251676987804	8.602732977959707	GCCCATGAATCAT
chr1	44603920	44603921	chr1:44603921:A:G	rs182749506	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	44645793	44645794	chr1:44645794:G:C	rs117455890	G	C	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	44646441	44646442	chr1:44646442:G:A	rs3768441	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	44662225	44662226	chr1:44662226:G:A	rs72671967	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	44819947	44819948	chr1:44819948:C:T	rs192524658	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	44819949	44819950	chr1:44819950:T:C	rs148551547	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	44819951	44819952	chr1:44819952:A:G	rs115827181	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	44819958	44819959	chr1:44819959:G:A	rs74485107	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	44819965	44819966	chr1:44819966:G:A	rs141950484	G	A	G	Hoxc9_MA0485.1	10	1	-	8.577983916566891	6.774148012258141	GCGCATAAATCTT
chr1	44819965	44819966	chr1:44819966:G:T	chr1:44819966:G:T	G	T	G	Hoxc9_MA0485.1	10	1	-	8.577983916566891	5.893983582692943	GCGCATAAATCTT
chr1	44819967	44819968	chr1:44819968:T:G	rs188051405	T	G	T	Hoxc9_MA0485.1	8	1	-	8.577983916566891	3.727581744622233	GCGCATAAATCTT
chr1	44819969	44819970	chr1:44819970:T:C	rs544685386	T	C	T	Hoxc9_MA0485.1	6	1	-	8.577983916566891	5.543778150057472	GCGCATAAATCTT
chr1	44819971	44819972	chr1:44819972:T:C	rs79027712	T	C	T	Hoxc9_MA0485.1	4	1	-	8.577983916566891	7.410220202575309	GCGCATAAATCTT
chr1	44819973	44819974	chr1:44819974:C:G	rs150681043	C	G	C	Hoxc9_MA0485.1	2	1	-	8.577983916566891	11.273868058288201	GCGCATAAATCTT
chr1	44819975	44819976	chr1:44819976:C:T	rs41269085	C	T	t	Hoxc9_MA0485.1	0	1	-	8.577983916566891	8.04516878327589	GCGCATAAATCTT
chr1	44819984	44819985	chr1:44819985:G:A	rs12132510	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	44819991	44819992	chr1:44819992:G:A	rs12036829	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	45762519	45762520	chr1:45762520:G:A	rs10157795	G	A	a	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	46108342	46108343	chr1:46108343:T:C	rs785484	T	C	C	Hoxc9_MA0485.1	2	1	+	8.248331613329478	9.625350090490702	GCTAGTAAATCTC
chr1	46247201	46247202	chr1:46247202:C:T	rs765674049	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	46570317	46570318	chr1:46570318:G:A	rs3766240	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	46673907	46673908	chr1:46673908:C:G	rs601060	C	G	G	Hoxc9_MA0485.1	0	1	-	9.065218681920834	7.777510272735712	GACTGTAAATCAA
chr1	47129262	47129263	chr1:47129263:C:A	rs12564103	C	A	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	47196754	47196755	chr1:47196755:A:G	rs4926513	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	47488084	47488085	chr1:47488085:A:G	rs11578572	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	47494184	47494185	chr1:47494185:C:A	rs2152820	C	A	C	Hoxc9_MA0485.1	1	1	-	8.716788581503398	6.634028260926859	TGCCATGAATCAG
chr1	47578259	47578260	chr1:47578260:C:T	rs74856158	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	47746942	47746943	chr1:47746943:T:C	rs10789515	T	C	C	Hoxc9_MA0485.1	0	1	-	12.147863609554099	12.6806787428451	AGCCATAAATCAA
chr1	47845101	47845102	chr1:47845102:G:A	rs114225877	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	47911829	47911830	chr1:47911830:T:G	rs116144490	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	48047353	48047354	chr1:48047354:C:T	rs12040714	C	T	c	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	48078063	48078064	chr1:48078064:A:C	chr1:48078064:A:C	A	C	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	48421055	48421056	chr1:48421056:G:A	rs78939745	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	50175983	50175984	chr1:50175984:G:A	rs78331461	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	50505591	50505592	chr1:50505592:A:G	rs57074997	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	50527390	50527391	chr1:50527391:C:T	rs113512950	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	50950527	50950528	chr1:50950528:G:C	rs927175649	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	50971184	50971185	chr1:50971185:C:T	rs3176456	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	51172961	51172962	chr1:51172962:A:C	rs55899822	A	C	A	Hoxc9_MA0485.1	6	1	+	8.143053410717581	5.969722115386596	GAAAGTAAATCAC
chr1	51261266	51261267	chr1:51261267:T:G	rs34653975	T	G	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	51737898	51737899	chr1:51737899:G:A	rs77083641	G	A	A	Hoxc9_MA0485.1	12	1	-	10.985827766714229	10.731830812949676	GGCAATAAATTAC
chr1	52670114	52670115	chr1:52670115:G:A	rs269317	G	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	52727329	52727330	chr1:52727330:C:G	rs112713636	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	52879303	52879304	chr1:52879304:C:T	rs481440	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	52955584	52955585	chr1:52955585:G:A	rs147358495	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	53057695	53057696	chr1:53057696:A:T	rs76991838	A	T	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	53141331	53141332	chr1:53141332:C:T	rs12738223	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	53257822	53257823	chr1:53257823:A:G	rs915191	A	G	A	Hoxc9_MA0485.1	11	1	+	9.542625823192015	5.130092424323647	ACCTGTAAATCAT
chr1	53336782	53336783	chr1:53336783:A:G	rs12071526	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	53391771	53391772	chr1:53391772:T:A	rs6660818	T	A	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	53462968	53462969	chr1:53462969:C:T	rs61768420	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	53500831	53500832	chr1:53500832:G:A	rs75569259	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	53583806	53583807	chr1:53583807:A:G	rs3006887	A	G	a	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	53599849	53599850	chr1:53599850:T:C	rs12120383	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	53601428	53601429	chr1:53601429:C:T	rs11206178	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	54003553	54003554	chr1:54003554:A:G	rs635509	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	54029220	54029221	chr1:54029221:T:A	rs146492261	T	A	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	54115162	54115163	chr1:54115163:G:A	rs114028928	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	54273186	54273187	chr1:54273187:G:A	rs574654589	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	54273197	54273198	chr1:54273198:T:A	rs3766423	T	A	T	Hoxc9_MA0485.1	12	1	-	9.201832196531285	9.791571378515082	GAACATAAATCAA
chr1	54287733	54287734	chr1:54287734:G:A	rs1361312	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	54844942	54844943	chr1:54844943:C:T	rs11580133	C	T	C	Hoxc9_MA0485.1	12	1	+	10.295715603581138	10.041718649816586	AGGCATAAATCAC
chr1	54963551	54963552	chr1:54963552:T:C	rs2317945	T	C	T	Hoxc9_MA0485.1	8	1	-	9.98615964910308	3.084201138968122	CCCCATAAATCTT
chr1	54977931	54977932	chr1:54977932:C:G	rs2433673	C	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	55191407	55191408	chr1:55191408:T:G	rs143276314	T	G	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	55514931	55514932	chr1:55514932:T:C	rs17112260	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	55576870	55576871	chr1:55576871:A:G	rs12401977	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	55712410	55712411	chr1:55712411:G:A	rs548497031	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	55712435	55712436	chr1:55712436:C:T	rs561809769	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	55718904	55718905	chr1:55718905:G:A	rs17112706	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	55750220	55750221	chr1:55750221:T:C	rs58551970	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	55928557	55928558	chr1:55928558:A:G	rs11804906	A	G	C	Hoxc9_MA0485.1	4	1	+	8.01211343407848	6.844349720086898	ATCCATAAATCCA
chr1	56098961	56098962	chr1:56098962:C:T	rs112545069	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	56148584	56148585	chr1:56148585:G:A	rs61773369	G	A	G	Hoxc9_MA0485.1	2	1	-	8.994076998175457	7.6170585210142345	GGCAATAAATATT
chr1	56220370	56220371	chr1:56220371:C:T	rs72677404	C	T	C	Hoxc9_MA0485.1	11	1	+	8.624273040599185	9.819673510289244	CACCATAAATCCC
chr1	56330082	56330083	chr1:56330083:G:A	rs115117905	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	56330742	56330743	chr1:56330743:A:G	rs9787125	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	56398160	56398161	chr1:56398161:A:G	rs192314951	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	56526743	56526744	chr1:56526744:A:G	rs6690245	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	56527714	56527715	chr1:56527715:A:C	rs554977026	A	C	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	56527731	56527732	chr1:56527732:T:C	chr1:56527732:T:C	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	56527742	56527743	chr1:56527743:G:C	rs1759752	G	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	56731582	56731583	chr1:56731583:T:G	rs75327084	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	57254607	57254608	chr1:57254608:C:T	rs197650	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	57393416	57393417	chr1:57393417:G:T	rs11207024	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	57393424	57393425	chr1:57393425:A:G	rs515148	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	57485907	57485908	chr1:57485908:T:C	rs2805878	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	57485915	57485916	chr1:57485916:G:T	rs59727725	G	T	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	57485919	57485920	chr1:57485920:G:C	rs57951998	G	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	57908417	57908418	chr1:57908418:G:A	rs1202799	G	A	.	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	58136524	58136525	chr1:58136525:G:A	rs17116988	G	A	C	Hoxc9_MA0485.1	12	1	-	9.346189491534828	9.092192537770275	TGTTATAAATCTC
chr1	58460722	58460723	chr1:58460723:G:T	rs12040053	G	T	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	58573457	58573458	chr1:58573458:C:T	rs76473011	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	58596595	58596596	chr1:58596596:T:C	rs11207270	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	58659842	58659843	chr1:58659843:C:T	rs12737926	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	58748752	58748753	chr1:58748753:C:T	rs12127952	C	T	T	Hoxc9_MA0485.1	3	1	+	7.772561947398594	6.884309174375971	TGCCGTTAATCAC
chr1	59112904	59112905	chr1:59112905:A:G	rs78581803	A	G	A	Hoxc9_MA0485.1	9	1	-	8.619659931809927	1.7314341174362953	GGTCATAAATAAA
chr1	59112909	59112910	chr1:59112910:T:C	rs10493260	T	C	C	Hoxc9_MA0485.1	4	1	-	8.619659931809927	7.451896217818343	GGTCATAAATAAA
chr1	59143497	59143498	chr1:59143498:C:T	rs996697762	C	T	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	59163849	59163850	chr1:59163850:G:A	rs579365	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	59163855	59163856	chr1:59163856:A:G	rs579340	A	G	G	Hoxc9_MA0485.1	12	1	-	8.902761396500487	9.15675835026504	TCCCATCAATCAT
chr1	59214831	59214832	chr1:59214832:C:T	rs181565282	C	T	C	Hoxc9_MA0485.1	3	1	+	9.050739592630864	8.162486819608242	TCCCGTAAATCTT
chr1	59418840	59418841	chr1:59418841:T:C	rs1521784	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	59481928	59481929	chr1:59481929:C:T	rs600370	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	59654288	59654289	chr1:59654289:T:C	rs10889148	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	59695583	59695584	chr1:59695584:G:A	rs4357555	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	59711788	59711789	chr1:59711789:C:T	rs186200246	C	T	C	Hoxc9_MA0485.1	3	1	+	7.219804085818885	6.331551312796262	CCCCATGAATCAA
chr1	60031626	60031627	chr1:60031627:C:T	rs35490593	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	60118272	60118273	chr1:60118273:C:A	rs78735044	C	A	C	Hoxc9_MA0485.1	12	1	-	7.423141794442912	7.887200619593238	AGCCATAACTCAG
chr1	60227968	60227969	chr1:60227969:G:T	rs1993815	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	60621733	60621734	chr1:60621734:T:G	chr1:60621734:T:G	T	G	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	60621736	60621737	chr1:60621737:G:C	chr1:60621737:G:C	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	60680497	60680498	chr1:60680498:C:A	rs484335	C	A	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	60741547	60741548	chr1:60741548:C:T	rs11207662	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	60976279	60976280	chr1:60976280:A:G	rs17121389	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	60999616	60999617	chr1:60999617:A:G	rs1283256	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	61255254	61255255	chr1:61255255:A:G	rs149559549	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	61385138	61385139	chr1:61385139:A:G	rs2983157	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	61451242	61451243	chr1:61451243:G:A	rs80350032	G	A	G	Hoxc9_MA0485.1	4	1	+	8.288011218231139	9.455774932222722	AGCTGTAAATTAA
chr1	61559546	61559547	chr1:61559547:G:A	rs12406226	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	61591897	61591898	chr1:61591898:G:T	rs7545693	G	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	61709867	61709868	chr1:61709868:C:A	rs1151771	C	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	61741581	61741582	chr1:61741582:A:G	rs7551399	A	G	G	Hoxc9_MA0485.1	4	1	+	7.769180392596815	6.60141667860523	CACAATCAATCAC
chr1	61968364	61968365	chr1:61968365:T:C	rs17385742	T	C	T	Hoxc9_MA0485.1	9	1	+	7.0868458425378345	0.19862002816420182	AGCCGTAAATACC
chr1	62029819	62029820	chr1:62029820:A:G	rs4915792	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	62105611	62105612	chr1:62105612:C:A	rs4915797	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	62180663	62180664	chr1:62180664:A:G	rs146544836	A	G	A	Hoxc9_MA0485.1	8	1	+	7.14119399082128	0.23923548068631983	GCCCTTAAATCTG
chr1	62228140	62228141	chr1:62228141:C:G	rs2481691	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	62359118	62359119	chr1:62359119:T:C	rs3861941	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	62783874	62783875	chr1:62783875:T:G	chr1:62783875:T:G	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	62830599	62830600	chr1:62830600:T:C	rs6679582	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	63030141	63030142	chr1:63030142:C:T	rs1330220	C	T	c	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	63043131	63043132	chr1:63043132:T:C	rs1532530	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	63073935	63073936	chr1:63073936:C:A	rs11809015	C	A	C	Hoxc9_MA0485.1	4	1	-	11.638595385686987	9.137743857361976	GGCCGTAAATCAG
chr1	63327483	63327484	chr1:63327484:A:G	rs10749738	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	63624990	63624991	chr1:63624991:A:G	rs2269258	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	63955585	63955586	chr1:63955586:G:T	rs7516135	G	T	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	64098166	64098167	chr1:64098167:C:G	rs942447	C	G	C	Hoxc9_MA0485.1	12	1	-	8.709518945119092	9.42757472403397	TCCAGTAAATCAG
chr1	64470093	64470094	chr1:64470094:G:A	rs60790964	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	64470106	64470107	chr1:64470107:A:C	chr1:64470107:A:C	A	C	A	Hoxc9_MA0485.1	11	1	+	10.386289806351158	8.333299951452076	TTCCATAAATCAC
chr1	64470114	64470115	chr1:64470115:C:T	rs1021115817	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	64567928	64567929	chr1:64567929:C:T	rs7418605	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	64816224	64816225	chr1:64816225:G:A	rs928510	G	A	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	64827070	64827071	chr1:64827071:G:A	rs11587486	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	64830173	64830174	chr1:64830174:G:A	rs883824	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	64841949	64841950	chr1:64841950:A:G	rs74080749	A	G	A	Hoxc9_MA0485.1	4	1	+	9.619389786413345	8.451626072421762	AGAAATAAATCAG
chr1	65151765	65151766	chr1:65151766:T:A	rs10889523	T	A	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	65222705	65222706	chr1:65222706:A:C	rs12022787	A	C	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	65222777	65222778	chr1:65222778:A:G	rs6677191	A	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	65297967	65297968	chr1:65297968:A:G	rs60304110	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	65471795	65471796	chr1:65471796:A:G	rs7555955	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	65698837	65698838	chr1:65698838:G:A	rs61780871	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	65698852	65698853	chr1:65698853:A:C	rs61780872	A	C	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	65948756	65948757	chr1:65948757:G:T	rs6680334	G	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	66269396	66269397	chr1:66269397:C:T	rs17425765	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	66270170	66270171	chr1:66270171:G:T	rs6688020	G	T	G	Hoxc9_MA0485.1	2	1	-	9.833526759749917	7.914123787346164	CACCATAAATCAA
chr1	66284095	66284096	chr1:66284096:C:T	rs575056	C	T	C	Hoxc9_MA0485.1	1	1	-	9.127699083476132	7.568255509566073	CGTTATAAATCAA
chr1	66319849	66319850	chr1:66319850:C:A	rs17427502	C	A	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	66365186	66365187	chr1:66365187:C:T	rs115091992	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	66633290	66633291	chr1:66633291:A:G	rs6701907	A	G	A	Hoxc9_MA0485.1	0	1	-	9.066994014138869	8.8346503566195	TGCCATAAATAAG
chr1	66634625	66634626	chr1:66634626:T:C	rs6696812	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	66676602	66676603	chr1:66676603:T:C	rs4655650	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	66679287	66679288	chr1:66679288:G:A	rs12043460	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	66747742	66747743	chr1:66747743:G:A	rs475762	G	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	66762696	66762697	chr1:66762697:G:A	rs116942631	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	67225071	67225072	chr1:67225072:G:A	rs61781387	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	67337375	67337376	chr1:67337376:G:C	rs1995147	G	C	G	Hoxc9_MA0485.1	0	1	+	10.624662255830893	9.336953846645773	GGCTGTAAATCAA
chr1	67525505	67525506	chr1:67525506:G:C	rs79204307	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	67555063	67555064	chr1:67555064:A:T	rs6701745	A	T	T	Hoxc9_MA0485.1	9	1	-	7.056406898874944	3.228764330374918	GCCCACAAATCAA
chr1	67597390	67597391	chr1:67597391:C:T	rs787506	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	67764632	67764633	chr1:67764633:T:C	rs72684531	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	67791613	67791614	chr1:67791614:C:G	rs529680549	C	G	C	Hoxc9_MA0485.1	3	1	+	8.438702571350161	2.92230609936447	TCCCATCAATCAG
chr1	67880538	67880539	chr1:67880539:T:C	rs74802291	T	C	T	Hoxc9_MA0485.1	9	1	+	7.809992906878805	0.9217670925051725	GTCTGTAAATCTG
chr1	67956490	67956491	chr1:67956491:G:C	rs11209185	G	C	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	67998047	67998048	chr1:67998048:A:G	rs57499162	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	67998051	67998052	chr1:67998052:C:T	rs58441381	C	T	C	Hoxc9_MA0485.1	3	1	+	8.884104074082357	7.995851301059735	GGCCATTAATCTT
chr1	68129909	68129910	chr1:68129910:T:A	rs10789257	T	A	t	Hoxc9_MA0485.1	9	1	+	7.905109915847869	4.077467347347844	TGCAGTAAATTTC
chr1	68215245	68215246	chr1:68215246:C:T	rs989842	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	68275814	68275815	chr1:68275815:C:T	rs11209248	C	T	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	68307138	68307139	chr1:68307139:G:C	rs183607856	G	C	G	Hoxc9_MA0485.1	11	1	-	7.389785501429792	5.030241957460503	GGCCATAAAACCT
chr1	68623771	68623772	chr1:68623772:G:T	rs2223699	G	T	G	Hoxc9_MA0485.1	2	1	-	9.609276497674877	7.689873525271124	AGCAATAAATTAA
chr1	68911854	68911855	chr1:68911855:T:C	rs548019078	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	69432760	69432761	chr1:69432761:G:C	rs7522980	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	69524209	69524210	chr1:69524210:A:T	rs78149677	A	T	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	69585972	69585973	chr1:69585973:A:C	rs1245055	A	C	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	69592099	69592100	chr1:69592100:G:A	rs10489549	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	69592548	69592549	chr1:69592549:G:T	rs61384003	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	69592563	69592564	chr1:69592564:A:C	rs60763622	A	C	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	69993970	69993971	chr1:69993971:A:G	rs12027422	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	70543108	70543109	chr1:70543109:G:C	rs673589	G	C	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	70864529	70864530	chr1:70864530:A:C	rs60068944	A	C	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	71033474	71033475	chr1:71033475:C:T	rs2300178	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	71101799	71101800	chr1:71101800:A:T	rs12748649	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	71108085	71108086	chr1:71108086:T:G	rs12116994	T	G	t	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	71361886	71361887	chr1:71361887:T:C	rs17560243	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	71494201	71494202	chr1:71494202:C:T	rs116915462	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	71823826	71823827	chr1:71823827:G:A	rs190791814	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	72013144	72013145	chr1:72013145:C:A	rs3102917	C	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	73833048	73833049	chr1:73833049:T:C	rs17094450	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	73887159	73887160	chr1:73887160:C:T	rs72685810	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	74050566	74050567	chr1:74050567:A:G	rs17094789	A	G	A	Hoxc9_MA0485.1	1	1	-	8.488990916731787	9.43279075597665	GTTCATAAATCTG
chr1	74733594	74733595	chr1:74733595:G:A	rs28563168	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	74733614	74733615	chr1:74733615:C:G	rs28568334	C	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	74734093	74734094	chr1:74734094:C:A	rs367626723	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	75720534	75720535	chr1:75720535:C:T	rs146610383	C	T	C	Hoxc9_MA0485.1	1	1	+	8.40565731074528	7.461857471500415	CCCTATAAATTAC
chr1	75872813	75872814	chr1:75872814:A:C	rs11161795	A	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	75936126	75936127	chr1:75936127:A:G	rs1770887	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	75936145	75936146	chr1:75936146:G:C	rs1796812	G	C	G	Hoxc9_MA0485.1	10	1	-	8.91139663604907	4.110325828301792	ACCTATAAATCCC
chr1	76314191	76314192	chr1:76314192:T:G	rs10873878	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	76623348	76623349	chr1:76623349:C:T	rs34741962	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	76990350	76990351	chr1:76990351:C:A	rs34981569	C	A	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	77009633	77009634	chr1:77009634:A:G	rs12124244	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	77731434	77731435	chr1:77731435:T:C	rs11578805	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	77837989	77837990	chr1:77837990:C:T	rs6666107	C	T	C	Hoxc9_MA0485.1	4	1	-	10.159036686148937	11.32680040014052	TGCTGTAAATCAT
chr1	78002757	78002758	chr1:78002758:T:C	rs557793917	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	78004434	78004435	chr1:78004435:G:A	rs28362659	G	A	G	Hoxc9_MA0485.1	10	1	-	7.662014710748427	5.858178806439676	GTCTATCAATCAG
chr1	78004442	78004443	chr1:78004443:G:A	rs141635994	G	A	G	Hoxc9_MA0485.1	2	1	-	7.662014710748427	6.284996233587203	GTCTATCAATCAG
chr1	78004466	78004467	chr1:78004467:A:G	rs4370803	A	G	G	Hoxc9_MA0485.1	4	1	+	8.513467592695822	7.345703878704238	CGACATAAATTAC
chr1	78254773	78254774	chr1:78254774:A:G	rs75085700	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	78291534	78291535	chr1:78291535:T:C	rs4512595	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	78587249	78587250	chr1:78587250:C:T	rs1023254	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	78620784	78620785	chr1:78620785:A:C	rs273241	A	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	78869655	78869656	chr1:78869656:T:C	rs1686340	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	79041913	79041914	chr1:79041914:G:T	rs74726984	G	T	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	79539011	79539012	chr1:79539012:T:C	rs17453930	T	C	T	Hoxc9_MA0485.1	3	1	+	9.949781922979298	10.83803469600192	TGTTATAAATCAT
chr1	79560795	79560796	chr1:79560796:A:G	rs61766391	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	79768860	79768861	chr1:79768861:G:A	rs940401	G	A	g	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	79776912	79776913	chr1:79776913:A:G	rs12023389	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	79833830	79833831	chr1:79833831:T:C	rs2118542	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	80014679	80014680	chr1:80014680:G:T	rs7518364	G	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	80701655	80701656	chr1:80701656:C:A	rs1765469	C	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	80853030	80853031	chr1:80853031:C:A	rs6689197	C	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	81085633	81085634	chr1:81085634:C:T	rs75966416	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	81114463	81114464	chr1:81114464:A:C	rs1195694	A	C	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	81151429	81151430	chr1:81151430:T:A	rs74854594	T	A	T	Hoxc9_MA0485.1	9	1	+	9.831591375609062	6.003948807109038	TGACATAAATCAG
chr1	81313230	81313231	chr1:81313231:A:G	rs7555976	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	81414220	81414221	chr1:81414221:C:T	rs116620362	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	81830980	81830981	chr1:81830981:C:T	rs35134484	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	82499213	82499214	chr1:82499214:A:T	rs7537124	A	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	82589001	82589002	chr1:82589002:T:C	rs10874321	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	82818878	82818879	chr1:82818879:A:G	rs563093	A	G	G	Hoxc9_MA0485.1	4	1	+	9.206620981632392	8.03885726764081	AGCTATAAATCCA
chr1	82819458	82819459	chr1:82819459:A:G	rs1923945	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	82978941	82978942	chr1:82978942:G:A	rs12134816	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	83086202	83086203	chr1:83086203:G:A	rs323931	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	83370229	83370230	chr1:83370230:C:T	rs2069114	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	83596750	83596751	chr1:83596751:A:G	rs4128486	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	83624481	83624482	chr1:83624482:C:T	rs12125932	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	83761548	83761549	chr1:83761549:G:T	rs55801652	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	83769289	83769290	chr1:83769290:T:C	rs17129321	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	83838954	83838955	chr1:83838955:C:T	rs17129909	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	84301270	84301271	chr1:84301271:A:G	rs561768800	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	84302307	84302308	chr1:84302308:G:A	rs181557625	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	84388930	84388931	chr1:84388931:T:C	rs477253	T	C	c	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	84634612	84634613	chr1:84634613:T:C	rs74805603	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	84700079	84700080	chr1:84700080:C:A	rs17114112	C	A	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	84700877	84700878	chr1:84700878:G:A	rs2994449	G	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	84757431	84757432	chr1:84757432:G:A	rs72716944	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	84833453	84833454	chr1:84833454:A:G	chr1:84833454:A:G	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	84854556	84854557	chr1:84854557:T:C	rs755933813	T	C	T	Hoxc9_MA0485.1	5	1	+	9.364034447835976	4.878723085197491	ACTCATAAATCTT
chr1	84854576	84854577	chr1:84854577:A:G	chr1:84854577:A:G	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	84907652	84907653	chr1:84907653:A:G	rs6664563	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	85240117	85240118	chr1:85240118:C:T	rs6663690	C	T	C	Hoxc9_MA0485.1	1	1	-	8.751687112465854	7.192243538555794	AGCAATAAATTTA
chr1	85303972	85303973	chr1:85303973:A:G	rs61769480	A	G	A	Hoxc9_MA0485.1	7	1	+	8.554826848437134	1.6505977792315574	GACTATAAATTAG
chr1	85495753	85495754	chr1:85495754:T:C	rs189676506	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	85629929	85629930	chr1:85629930:A:C	rs1360240	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	86111693	86111694	chr1:86111694:A:C	rs12062793	A	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	86111697	86111698	chr1:86111698:C:T	rs61802235	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	86135639	86135640	chr1:86135640:G:C	rs75426564	G	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	86158878	86158879	chr1:86158879:G:T	rs76688921	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	86419444	86419445	chr1:86419445:A:C	rs78672535	A	C	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	86419455	86419456	chr1:86419456:C:G	rs3945233	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	86596517	86596518	chr1:86596518:G:A	rs6679741	G	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	86742116	86742117	chr1:86742117:G:T	rs166415	G	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	87221726	87221727	chr1:87221727:T:C	rs72725826	T	C	T	Hoxc9_MA0485.1	4	1	-	9.505405395297164	8.33764168130558	CCCAATAAATCTC
chr1	87528810	87528811	chr1:87528811:C:T	rs1974183	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	87707276	87707277	chr1:87707277:G:A	rs10493799	G	A	G	Hoxc9_MA0485.1	10	1	-	9.526825700955296	7.722989796646545	GGTAGTAAATCAG
chr1	87826977	87826978	chr1:87826978:T:C	rs13375846	T	C	T	Hoxc9_MA0485.1	8	1	-	9.128811506467677	2.2268529963327195	GCCAATAAATTAG
chr1	87968202	87968203	chr1:87968203:C:T	rs56293054	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	88276232	88276233	chr1:88276233:G:C	rs1288671	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	88276326	88276327	chr1:88276327:T:G	rs569619	T	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	88359362	88359363	chr1:88359363:G:C	rs116018940	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	88485091	88485092	chr1:88485092:T:C	rs10923081	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	88892502	88892503	chr1:88892503:A:T	rs4655888	A	T	A	Hoxc9_MA0485.1	1	1	-	8.793949213571667	9.317265960238144	TTCAATAAATCTC
chr1	89029027	89029028	chr1:89029028:T:C	rs10922548	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	89127353	89127354	chr1:89127354:G:T	rs61798958	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	89127367	89127368	chr1:89127368:G:A	rs141670171	G	A	G	Hoxc9_MA0485.1	10	1	-	10.622712580383652	8.8188766760749	TGCAATAAATCTT
chr1	89523774	89523775	chr1:89523775:C:T	rs168611	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	89523794	89523795	chr1:89523795:C:T	rs359920	C	T	T	Hoxc9_MA0485.1	3	1	+	9.960610433925117	9.072357660902494	AGACATAAATCTT
chr1	89608248	89608249	chr1:89608249:T:C	rs946385	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	89617014	89617015	chr1:89617015:G:C	rs1215520	G	C	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	89724214	89724215	chr1:89724215:C:T	rs1011702	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	89890438	89890439	chr1:89890439:A:G	rs80270551	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	90832089	90832090	chr1:90832090:G:A	rs61737574	G	A	G	Hoxc9_MA0485.1	4	1	+	9.929982274085072	11.097745988076655	CCCCGTAAATCAC
chr1	91597330	91597331	chr1:91597331:G:A	rs72712437	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	91601791	91601792	chr1:91601792:C:T	rs12124960	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	91734744	91734745	chr1:91734745:C:T	rs141107775	C	T	C	Hoxc9_MA0485.1	10	1	+	10.373975870851593	8.570139966542841	TGTCATAAATCAG
chr1	91891805	91891806	chr1:91891806:G:A	rs2996478	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	91916936	91916937	chr1:91916937:A:G	rs6674287	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	92316021	92316022	chr1:92316022:C:T	rs11166543	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	92486426	92486427	chr1:92486427:G:A	rs575253271	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	92705884	92705885	chr1:92705885:C:G	rs9439920	C	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	92705931	92705932	chr1:92705932:C:G	rs11803097	C	G	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	92711883	92711884	chr1:92711884:T:A	rs6604008	T	A	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	92848021	92848022	chr1:92848022:G:C	rs2244005	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	93025717	93025718	chr1:93025718:A:G	rs9787147	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	93577667	93577668	chr1:93577668:C:T	rs116539394	C	T	C	Hoxc9_MA0485.1	1	1	-	8.700975395917995	7.1415318220079325	AGTTGTAAATCTC
chr1	93616037	93616038	chr1:93616038:A:T	rs141362372	A	T	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	93616047	93616048	chr1:93616048:G:C	chr1:93616048:G:C	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	93616051	93616052	chr1:93616052:T:C	rs10489541	T	C	T	Hoxc9_MA0485.1	3	1	+	7.877219804552811	8.765472577575435	ACATGTAAATCAC
chr1	93681871	93681872	chr1:93681872:G:A	rs746777194	G	A	G	Hoxc9_MA0485.1	10	1	-	7.338524668672378	5.534688764363627	AGCCGCAAATCAC
chr1	93681892	93681893	chr1:93681893:A:C	rs1042030377	A	C	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	93682475	93682476	chr1:93682476:A:T	rs6541387	A	T	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	93687182	93687183	chr1:93687183:T:G	rs7519952	T	G	G	Hoxc9_MA0485.1	9	1	+	8.442655033128021	1.5544292187543882	CATCATAAATCTC
chr1	93743419	93743420	chr1:93743420:A:G	rs11582870	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	93905861	93905862	chr1:93905862:T:G	chr1:93905862:T:G	T	G	T	Hoxc9_MA0485.1	6	1	-	11.429340622517346	9.256009327186364	GGTCATAAATCAG
chr1	93980816	93980817	chr1:93980817:C:T	rs72725124	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	93981021	93981022	chr1:93981022:C:A	rs11165055	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	93981032	93981033	chr1:93981033:C:A	rs11165056	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	94690106	94690107	chr1:94690107:C:T	rs11165215	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	94783749	94783750	chr1:94783750:C:T	rs12743267	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	94903870	94903871	chr1:94903871:T:G	rs138903152	T	G	T	Hoxc9_MA0485.1	6	1	+	8.085856802603706	8.580375501631803	AGTCATTAATCAC
chr1	95094825	95094826	chr1:95094826:T:C	rs12569038	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	95363095	95363096	chr1:95363096:A:G	rs12562298	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	95372129	95372130	chr1:95372130:A:G	rs7524217	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	95375377	95375378	chr1:95375378:C:T	rs12040749	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	96520238	96520239	chr1:96520239:C:T	rs114388320	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	96962473	96962474	chr1:96962474:G:A	rs12066233	G	A	A	Hoxc9_MA0485.1	12	1	+	10.69458941494688	10.568909058113409	GGTAATAAATCAG
chr1	97200713	97200714	chr1:97200714:C:T	rs144885566	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	97430205	97430206	chr1:97430206:T:C	rs11165870	T	C	T	Hoxc9_MA0485.1	9	1	+	9.327512553364755	2.4392867389911235	GAACATAAATCAG
chr1	97680697	97680698	chr1:97680698:C:A	rs76408807	C	A	A	Hoxc9_MA0485.1	0	1	-	8.378439427352337	7.323074675686581	GGTAATGAATCAC
chr1	97743553	97743554	chr1:97743554:T:C	rs17378539	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	98046304	98046305	chr1:98046305:A:G	rs145228502	A	G	A	Hoxc9_MA0485.1	4	1	+	9.068245314035957	7.900481600044375	GACCATAAATCCA
chr1	98449850	98449851	chr1:98449851:G:A	rs12084220	G	A	G	Hoxc9_MA0485.1	2	1	-	9.75545790451356	8.378439427352337	GGCAATGAATCAC
chr1	98797861	98797862	chr1:98797862:G:A	rs9729300	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	99107735	99107736	chr1:99107736:A:G	rs3913779	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	99150157	99150158	chr1:99150158:C:T	rs587509	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	99552144	99552145	chr1:99552145:A:G	rs6656134	A	G	G	Hoxc9_MA0485.1	6	1	+	9.310210013083442	6.276004246574021	CTCCATAAATCAA
chr1	99558100	99558101	chr1:99558101:A:G	rs77930938	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	99753453	99753454	chr1:99753454:C:T	rs6577135	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	99776491	99776492	chr1:99776492:A:C	rs10875257	A	C	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	99849412	99849413	chr1:99849413:T:C	rs17121311	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	99914694	99914695	chr1:99914695:T:A	rs3820157	T	A	T	Hoxc9_MA0485.1	10	1	-	9.996678408971151	10.876842838536348	GGCCATAAATAAA
chr1	100325675	100325676	chr1:100325676:A:T	rs11809147	A	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	100346949	100346950	chr1:100346950:A:G	rs76781965	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	100597307	100597308	chr1:100597308:A:C	rs932533256	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	100611766	100611767	chr1:100611767:T:C	rs7415343	T	C	T	Hoxc9_MA0485.1	5	1	+	9.215180512652141	4.729869150013655	ACACATAAATCAG
chr1	100626533	100626534	chr1:100626534:G:T	rs72977364	G	T	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	100644047	100644048	chr1:100644048:C:T	rs17404073	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	100855646	100855647	chr1:100855647:T:C	rs11166528	T	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	100860537	100860538	chr1:100860538:C:T	rs17123424	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	100959991	100959992	chr1:100959992:T:C	rs17123541	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	101237273	101237274	chr1:101237274:A:T	rs539770753	A	T	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	101254164	101254165	chr1:101254165:G:C	rs2038367	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	101254179	101254180	chr1:101254180:T:C	rs2038368	T	C	T	Hoxc9_MA0485.1	4	1	-	9.012307663398264	7.844543949406682	GATCATAAATCTG
chr1	101295332	101295333	chr1:101295333:G:A	rs2144555	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	101301638	101301639	chr1:101301639:C:T	rs115049887	C	T	C	Hoxc9_MA0485.1	12	1	-	9.235015389519921	9.10933503268645	TCTCATAAATCAG
chr1	101407513	101407514	chr1:101407514:A:C	rs1826317	A	C	A	Hoxc9_MA0485.1	11	1	+	8.567193140516764	6.514203285617684	AGCAGTAAATTAG
chr1	101454405	101454406	chr1:101454406:C:T	rs17124506	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	101826553	101826554	chr1:101826554:C:T	rs17470099	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	102113303	102113304	chr1:102113304:G:C	rs4445491	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	102463389	102463390	chr1:102463390:C:G	rs72723368	C	G	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	102732898	102732899	chr1:102732899:T:C	rs76703599	T	C	T	Hoxc9_MA0485.1	8	1	-	9.720739862288498	2.818781352153542	GGCTATAAATTTT
chr1	102896550	102896551	chr1:102896551:C:T	rs142314646	C	T	C	Hoxc9_MA0485.1	0	1	+	7.565327765159954	7.797671422679323	CGCCATAAAACAA
chr1	102937438	102937439	chr1:102937439:A:G	rs6679803	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	102961588	102961589	chr1:102961589:C:T	rs1012283	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	103087363	103087364	chr1:103087364:A:G	rs6577351	A	G	A	Hoxc9_MA0485.1	8	1	+	8.045172011291466	1.1432135011565063	TCCCATCAATCTT
chr1	103087378	103087379	chr1:103087379:A:G	rs1415363	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	103109312	103109313	chr1:103109313:G:A	rs11811418	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	103195365	103195366	chr1:103195366:C:T	rs1406126	C	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	103211153	103211154	chr1:103211154:G:C	rs12131462	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	103211185	103211186	chr1:103211186:T:C	rs10782925	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	103283742	103283743	chr1:103283743:T:C	rs1881275	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	103283787	103283788	chr1:103283788:G:A	rs1881276	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	103341712	103341713	chr1:103341713:A:C	rs901771010	A	C	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	104291531	104291532	chr1:104291532:T:C	rs4463678	T	C	T	Hoxc9_MA0485.1	1	1	-	9.066389532896142	10.625833106806203	AATAATAAATCAT
chr1	104294459	104294460	chr1:104294460:G:A	rs7521048	G	A	G	Hoxc9_MA0485.1	4	1	+	9.564067098958093	10.731830812949676	GGCAGTAAATTAT
chr1	104309281	104309282	chr1:104309282:A:C	rs12034300	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	104309315	104309316	chr1:104309316:T:C	rs12035919	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	104353538	104353539	chr1:104353539:G:A	rs4409662	G	A	A	Hoxc9_MA0485.1	3	1	-	8.794697420073753	7.9064446470511305	AAACATAAATCAG
chr1	104602801	104602802	chr1:104602802:A:T	rs11184223	A	T	t	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	104631786	104631787	chr1:104631787:C:T	rs7555058	C	T	C	Hoxc9_MA0485.1	12	1	+	9.044983518544395	8.790986564779843	ACATATAAATCAC
chr1	104636640	104636641	chr1:104636641:G:T	rs12078853	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	104862492	104862493	chr1:104862493:C:T	rs75235839	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	105334288	105334289	chr1:105334289:A:T	rs2491607	A	T	T	Hoxc9_MA0485.1	12	1	-	9.30759445947759	8.717855277493793	AGTCATAAATCCT
chr1	105619110	105619111	chr1:105619111:T:C	rs12030280	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	105630467	105630468	chr1:105630468:G:T	rs11585693	G	T	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	105678551	105678552	chr1:105678552:C:T	rs790982	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	106567506	106567507	chr1:106567507:G:A	rs4440890	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	106746619	106746620	chr1:106746620:C:T	rs17017540	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	106747187	106747188	chr1:106747188:C:T	rs6686425	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	106889351	106889352	chr1:106889352:A:G	rs1519878	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	107328257	107328258	chr1:107328258:T:A	rs7523331	T	A	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	107437056	107437057	chr1:107437057:T:G	rs483206	T	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	107525903	107525904	chr1:107525904:G:A	rs562394025	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	107545521	107545522	chr1:107545522:C:A	rs586180	C	A	C	Hoxc9_MA0485.1	1	1	-	8.250836250739505	6.168075930162969	GGCTATAAATATA
chr1	107621512	107621513	chr1:107621513:A:G	rs4638153	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	107914445	107914446	chr1:107914446:G:C	rs76497323	G	C	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	107966807	107966808	chr1:107966808:T:C	rs345267	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	107966820	107966821	chr1:107966821:T:G	rs17229521	T	G	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	108120595	108120596	chr1:108120596:C:T	rs1660416	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	108645759	108645760	chr1:108645760:G:A	rs2358530	G	A	A	Hoxc9_MA0485.1	2	1	-	8.950870044147761	7.573851566986539	GACAGTAAATCTT
chr1	108686771	108686772	chr1:108686772:A:G	rs72980715	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	108709002	108709003	chr1:108709003:G:A	rs116222409	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	108720081	108720082	chr1:108720082:T:C	rs554675654	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	108730646	108730647	chr1:108730647:A:G	rs4622086	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	108734283	108734284	chr1:108734284:A:T	rs1350951659	A	T	A	Hoxc9_MA0485.1	7	1	+	8.643568174542063	3.4477169656254865	ATTTATAAATCAC
chr1	108845657	108845658	chr1:108845658:A:G	rs17029825	A	G	A	Hoxc9_MA0485.1	8	1	+	7.763657023275037	0.8616985131400778	CACTGTAAATCTC
chr1	109214920	109214921	chr1:109214921:A:G	rs141792440	A	G	A	Hoxc9_MA0485.1	4	1	+	11.527865012052754	10.36010129806117	GCCCATAAATCTC
chr1	109532602	109532603	chr1:109532603:C:T	rs201924776	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	109653481	109653482	chr1:109653482:A:G	rs188035370	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	109714308	109714309	chr1:109714309:G:C	rs12743015	G	C	.	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	109948589	109948590	chr1:109948590:C:T	rs6675402	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	109961737	109961738	chr1:109961738:C:T	rs11102041	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	110100595	110100596	chr1:110100596:T:C	rs74918655	T	C	T	Hoxc9_MA0485.1	4	1	-	7.902506406390399	6.734742692398816	CCCTATAAATCCT
chr1	110100602	110100603	chr1:110100603:A:G	rs627067	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	110121157	110121158	chr1:110121158:A:G	rs12756461	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	110264228	110264229	chr1:110264229:A:C	rs12127427	A	C	A	Hoxc9_MA0485.1	0	1	+	10.770845132392875	10.015951856498756	AGTCATAAATCAA
chr1	110494094	110494095	chr1:110494095:T:C	rs17630160	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	110645262	110645263	chr1:110645263:C:T	rs2640493	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	111572594	111572595	chr1:111572595:G:A	rs74868687	G	A	G	Hoxc9_MA0485.1	12	1	+	7.348769528621772	7.223089171788302	CCCCATCAATCTG
chr1	111631804	111631805	chr1:111631805:C:T	rs3843829	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	111689663	111689664	chr1:111689664:C:G	rs78827220	C	G	c	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	111730862	111730863	chr1:111730863:T:C	rs1546924	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	111881149	111881150	chr1:111881150:C:T	rs56229278	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	111927470	111927471	chr1:111927471:T:C	rs11102355	T	C	T	Hoxc9_MA0485.1	8	1	-	9.29506709624826	2.3931085861133	GGCTGTCAATCAC
chr1	112264446	112264447	chr1:112264447:T:C	rs17029913	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	112317439	112317440	chr1:112317440:C:T	rs144804687	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	112317441	112317442	chr1:112317442:A:G	rs74110034	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	112434737	112434738	chr1:112434738:C:G	rs2483346	C	G	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	112524622	112524623	chr1:112524623:C:T	rs59324334	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	112544248	112544249	chr1:112544249:C:G	rs79175643	C	G	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	112863100	112863101	chr1:112863101:T:A	rs74111360	T	A	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	112982016	112982017	chr1:112982017:T:G	rs4839276	T	G	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	113098312	113098313	chr1:113098313:A:G	rs1216808	A	G	N	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	113197828	113197829	chr1:113197829:T:C	rs145448732	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	113563337	113563338	chr1:113563338:C:G	rs116182134	C	G	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	114082440	114082441	chr1:114082441:A:C	chr1:114082441:A:C	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	114135958	114135959	chr1:114135959:G:A	rs4839363	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	114136234	114136235	chr1:114136235:G:T	rs7527134	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	114453701	114453702	chr1:114453702:T:C	rs11589568	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	114757974	114757975	chr1:114757975:G:A	rs201293540	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	114757982	114757983	chr1:114757983:G:A	rs1056808090	G	A	G	Hoxc9_MA0485.1	1	1	+	8.703375010801647	7.1439314368915845	AGGAATAAATCTC
chr1	114758007	114758008	chr1:114758008:G:C	rs968214706	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	114820033	114820034	chr1:114820034:T:C	rs3121505	T	C	T	Hoxc9_MA0485.1	3	1	-	9.49969105698698	4.7180457925717585	TGTAATAAATCTC
chr1	115192427	115192428	chr1:115192428:C:T	rs10489532	C	T	C	Hoxc9_MA0485.1	12	1	+	10.386289806351158	10.132292852586605	TTCCATAAATCAC
chr1	115200873	115200874	chr1:115200874:T:G	rs1286221	T	G	G	Hoxc9_MA0485.1	10	1	+	8.062173489584259	5.064938586145734	GTCCATAAATTTG
chr1	115239446	115239447	chr1:115239447:A:G	rs1777719	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	115266900	115266901	chr1:115266901:T:C	rs80320440	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	115277519	115277520	chr1:115277520:C:A	rs182174161	C	A	C	Hoxc9_MA0485.1	2	1	+	8.845807639819453	6.926404667415698	AGCCATGAATCTT
chr1	115400399	115400400	chr1:115400400:T:C	rs144251826	T	C	T	Hoxc9_MA0485.1	4	1	-	9.913255747183852	8.745492033192269	AGTCATAAATCTA
chr1	115462906	115462907	chr1:115462907:T:C	rs932819	T	C	C	Hoxc9_MA0485.1	9	1	+	8.241732427970883	1.353506613597249	GAACATAAATTAC
chr1	115588299	115588300	chr1:115588300:T:C	rs7534425	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	115647696	115647697	chr1:115647697:G:T	rs12728888	G	T	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	115769992	115769993	chr1:115769993:T:C	rs3810997	T	C	T	Hoxc9_MA0485.1	5	1	+	10.008272716203722	5.522961353565237	AGTTATAAATCAG
chr1	115978435	115978436	chr1:115978436:A:C	rs924277	A	C	C	Hoxc9_MA0485.1	12	1	-	11.710974350918836	11.24691552576851	GACCATAAATCAT
chr1	115979959	115979960	chr1:115979960:C:G	rs1281692	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	116139364	116139365	chr1:116139365:C:A	rs72693711	C	A	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	116287364	116287365	chr1:116287365:T:C	rs9919147	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	116537753	116537754	chr1:116537754:G:A	rs142887794	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	116820467	116820468	chr1:116820468:C:T	rs79962944	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	116941191	116941192	chr1:116941192:C:T	rs936906157	C	T	C	Hoxc9_MA0485.1	0	1	-	8.849629584182052	8.31681445089105	GCCTATAAATTAA
chr1	116996750	116996751	chr1:116996751:G:T	rs4659051	G	T	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	117093916	117093917	chr1:117093917:C:T	rs578076216	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	117110880	117110881	chr1:117110881:G:A	rs1325510	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	117336443	117336444	chr1:117336444:C:T	rs878618	C	T	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	117392924	117392925	chr1:117392925:C:G	rs3767791	C	G	C	Hoxc9_MA0485.1	3	1	+	8.211398164012277	2.6950016920265845	AGCCTTAAATCTT
chr1	117757727	117757728	chr1:117757728:A:G	rs10923414	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	117948363	117948364	chr1:117948364:C:G	rs74114919	C	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	118077687	118077688	chr1:118077688:A:T	rs11807107	A	T	A	Hoxc9_MA0485.1	5	1	-	9.003131149634207	2.104588173914613	GCCAATAAATTAA
chr1	118301051	118301052	chr1:118301052:C:T	rs2490198	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	118454057	118454058	chr1:118454058:T:C	rs1229130	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	118751420	118751421	chr1:118751421:G:C	rs10923667	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	118923651	118923652	chr1:118923652:A:G	rs4659129	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	118999255	118999256	chr1:118999256:T:C	rs10923720	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	119037628	119037629	chr1:119037629:T:C	rs12029198	T	C	t	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	119310311	119310312	chr1:119310312:C:T	rs10923798	C	T	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	119318836	119318837	chr1:119318837:C:A	rs725247	C	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	119610263	119610264	chr1:119610264:A:G	rs11799580	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	119664308	119664309	chr1:119664309:G:T	rs629735	G	T	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	119673444	119673445	chr1:119673445:T:G	chr1:119673445:T:G	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	119687095	119687096	chr1:119687096:A:G	rs12023426	A	G	A	Hoxc9_MA0485.1	9	1	-	9.542242892276404	2.654017077902773	ACCAATAAATCTG
chr1	119712954	119712955	chr1:119712955:C:G	rs839615	C	G	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	119783629	119783630	chr1:119783630:A:T	rs150147865	A	T	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	119860140	119860141	chr1:119860141:A:G	rs860674	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	119860166	119860167	chr1:119860167:A:G	rs844346	A	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	119886172	119886173	chr1:119886173:A:G	rs2843025	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	119886207	119886208	chr1:119886208:G:A	rs17024432	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	119903439	119903440	chr1:119903440:T:C	rs2641352	T	C	T	Hoxc9_MA0485.1	3	1	-	8.418054910856759	3.636409646441538	AACAGTAAATCTT
chr1	120858956	120858957	chr1:120858957:C:A	rs1364852989	C	A	c	Hoxc9_MA0485.1	2	1	+	9.187924728997496	7.268521756593743	AGCTATAAATTTT
chr1	121013798	121013799	chr1:121013799:G:T	rs1490144998	G	T	g	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	144985513	144985514	chr1:144985514:C:A	rs11249384	C	A	c	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	145826264	145826265	chr1:145826265:A:G	rs141373368	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	146986093	146986094	chr1:146986094:C:T	rs1243635029	C	T	.	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	147287848	147287849	chr1:147287849:G:A	rs12755465	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	147292595	147292596	chr1:147292596:C:G	rs7555817	C	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	147506138	147506139	chr1:147506139:C:T	rs17160295	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	147542719	147542720	chr1:147542720:G:T	rs73007950	G	T	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	147625833	147625834	chr1:147625834:T:C	rs3766512	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	147815601	147815602	chr1:147815602:G:C	rs139177917	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	147988061	147988062	chr1:147988062:G:A	rs1176610019	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	148280461	148280462	chr1:148280462:G:A	rs3009410	G	A	.	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	148303728	148303729	chr1:148303729:A:G	rs587748592	A	G	.	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	149664955	149664956	chr1:149664956:A:T	rs879073542	A	T	t	Hoxc9_MA0485.1	8	1	+	10.876709534148205	3.9747510240132464	TGCAATAAATCTC
chr1	149664966	149664967	chr1:149664967:T:C	rs879056341	T	C	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	149883850	149883851	chr1:149883851:C:T	rs183073811	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	150173447	150173448	chr1:150173448:C:T	rs73020873	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	150374897	150374898	chr1:150374898:G:A	rs1260457	G	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	150570651	150570652	chr1:150570652:C:T	rs11204666	C	T	.	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	150619902	150619903	chr1:150619903:G:A	rs80278093	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	151722794	151722795	chr1:151722795:T:C	rs6696250	T	C	T	Hoxc9_MA0485.1	11	1	+	7.650665623983683	6.455265154293626	AGCTGTCAATCTT
chr1	151909987	151909988	chr1:151909988:G:C	rs556445207	G	C	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	151910509	151910510	chr1:151910510:C:T	rs1045817205	C	T	C	Hoxc9_MA0485.1	2	1	+	9.609276497674877	8.232258020513655	AGCAATAAATTAA
chr1	151980569	151980570	chr1:151980570:A:G	rs2932591	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	152366556	152366557	chr1:152366557:A:G	rs72698921	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	152525448	152525449	chr1:152525449:A:G	rs79563434	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	152660144	152660145	chr1:152660145:T:C	rs6667511	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	153490789	153490790	chr1:153490790:A:G	rs6658948	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	153518109	153518110	chr1:153518110:G:A	rs78414796	G	A	g	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	153795183	153795184	chr1:153795184:C:T	rs369558024	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	154431859	154431860	chr1:154431860:C:T	rs7549250	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	154543645	154543646	chr1:154543646:A:C	rs6672087	A	C	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	154566077	154566078	chr1:154566078:C:G	rs6660775	C	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	154709473	154709474	chr1:154709474:A:G	rs6695232	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	155050383	155050384	chr1:155050384:G:A	rs12085572	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	156008752	156008753	chr1:156008753:C:G	rs10908486	C	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	156448529	156448530	chr1:156448530:G:T	rs149471014	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	156649679	156649680	chr1:156649680:A:G	rs114704886	A	G	A	Hoxc9_MA0485.1	3	1	-	8.91139663604907	9.799649409071693	ACCTATAAATCCC
chr1	156705153	156705154	chr1:156705154:C:A	chr1:156705154:C:A	C	A	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	156937088	156937089	chr1:156937089:G:A	rs2275198	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	156937117	156937118	chr1:156937118:C:T	rs868187	C	T	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	157070410	157070411	chr1:157070411:G:A	rs35904515	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	157234463	157234464	chr1:157234464:A:G	rs11264643	A	G	N	Hoxc9_MA0485.1	6	1	+	8.583838588285621	5.549632821776201	TCCAGTAAATCAA
chr1	157235795	157235796	chr1:157235796:A:C	rs2316831	A	C	N	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	157235803	157235804	chr1:157235804:T:C	rs2316832	T	C	N	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	157282222	157282223	chr1:157282223:C:T	rs1338686	C	T	N	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	157304127	157304128	chr1:157304128:T:C	rs4661116	T	C	t	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	157331802	157331803	chr1:157331803:A:G	rs4661026	A	G	a	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	157482697	157482698	chr1:157482698:T:C	rs10908571	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	157956865	157956866	chr1:157956866:C:G	rs12097531	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	157961988	157961989	chr1:157961989:C:A	rs76449119	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	157966305	157966306	chr1:157966306:C:T	rs140755851	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	158105641	158105642	chr1:158105642:T:A	rs74120559	T	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	158105642	158105643	chr1:158105643:G:T	rs74120560	G	T	T	Hoxc9_MA0485.1	0	1	+	10.244881479870175	9.18951672820442	GGTAGTAAATCAC
chr1	158772615	158772616	chr1:158772616:A:G	rs12096284	A	G	A	Hoxc9_MA0485.1	10	1	+	8.063422187106722	5.946351713233394	GGACATAAATATC
chr1	158969336	158969337	chr1:158969337:C:T	rs72704948	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	159022295	159022296	chr1:159022296:G:T	rs7535856	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	159198253	159198254	chr1:159198254:G:A	rs862995	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	159493104	159493105	chr1:159493105:T:G	rs7525975	T	G	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	159601176	159601177	chr1:159601177:C:T	rs7541411	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	159916300	159916301	chr1:159916301:T:C	rs59901067	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	160018329	160018330	chr1:160018330:C:T	rs4656869	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	160022991	160022992	chr1:160022992:T:C	rs12239927	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	160219176	160219177	chr1:160219177:C:T	rs111397883	C	T	C	Hoxc9_MA0485.1	10	1	+	8.038723175762486	6.234887271453736	GCACATCAATCAT
chr1	160374394	160374395	chr1:160374395:A:G	rs932746	A	G	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	160607365	160607366	chr1:160607366:C:T	rs17385878	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	160647170	160647171	chr1:160647171:G:A	rs568820760	G	A	g	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	160706503	160706504	chr1:160706504:C:T	rs11584616	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	160712040	160712041	chr1:160712041:C:T	rs116656566	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	160712045	160712046	chr1:160712046:C:G	rs352685	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	160931009	160931010	chr1:160931010:T:A	rs7518537	T	A	.	Hoxc9_MA0485.1	8	1	-	8.195367380206616	1.2934088700716566	GGCCACAAATCAA
chr1	161533048	161533049	chr1:161533049:T:C	chr1:161533049:T:C	T	C	-	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	161533058	161533059	chr1:161533059:A:G	rs79568124	A	G	-	Hoxc9_MA0485.1	4	1	+	9.265693375809168	8.097929661817583	CTCTATAAATCAC
chr1	161728869	161728870	chr1:161728870:C:A	rs12139524	C	A	C	Hoxc9_MA0485.1	2	1	+	8.51128164130783	6.591878668904078	AGCCATCAATCCT
chr1	161956495	161956496	chr1:161956496:A:G	rs570914412	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	162146249	162146250	chr1:162146250:T:C	rs1337059	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	162169080	162169081	chr1:162169081:G:A	rs17457052	G	A	G	Hoxc9_MA0485.1	3	1	-	8.045172011291466	7.156919238268842	TCCCATCAATCTT
chr1	162336624	162336625	chr1:162336625:T:G	rs980828	T	G	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	162371850	162371851	chr1:162371851:C:T	rs76800798	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	162410274	162410275	chr1:162410275:C:T	rs164134	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	162710699	162710700	chr1:162710700:T:C	rs10799868	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	162917628	162917629	chr1:162917629:C:T	rs12143958	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	163085721	163085722	chr1:163085722:G:A	rs2841958	G	A	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	163142046	163142047	chr1:163142047:G:A	rs6413906	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	163164117	163164118	chr1:163164118:T:C	rs2063140	T	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	163257213	163257214	chr1:163257214:G:C	chr1:163257214:G:C	G	C	G	Hoxc9_MA0485.1	12	1	-	7.912182111588476	7.194126332673599	TGCTTTAAATCAC
chr1	163258360	163258361	chr1:163258361:T:C	rs937925	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	163381978	163381979	chr1:163381979:T:G	rs1439434879	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	163474704	163474705	chr1:163474705:T:C	rs7528059	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	164186971	164186972	chr1:164186972:T:C	rs16825999	T	C	C	Hoxc9_MA0485.1	6	1	-	7.533375448354859	4.499169681845438	CTCAGTAAATCAG
chr1	164440628	164440629	chr1:164440629:G:A	rs923412	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	164775651	164775652	chr1:164775652:T:C	rs10753646	T	C	T	Hoxc9_MA0485.1	6	1	-	7.981378753776958	4.9471729872675345	CAGCATAAATCAC
chr1	165288412	165288413	chr1:165288413:G:A	rs16842092	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	165883782	165883783	chr1:165883783:C:T	rs10918302	C	T	C	Hoxc9_MA0485.1	2	1	+	8.830925348954224	7.453906871793	CACAATAAATCTT
chr1	165883991	165883992	chr1:165883992:T:C	rs10918303	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	166379215	166379216	chr1:166379216:G:A	rs6679446	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	166859069	166859070	chr1:166859070:C:A	rs4657607	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	167105512	167105513	chr1:167105513:T:C	rs16858452	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	167105546	167105547	chr1:167105547:T:C	rs906262397	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	167163103	167163104	chr1:167163104:C:T	rs11577383	C	T	C	Hoxc9_MA0485.1	3	1	+	10.466051424858023	9.577798651835398	GCACATAAATCAC
chr1	167468541	167468542	chr1:167468542:C:T	rs116312494	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	167512211	167512212	chr1:167512212:C:A	rs890167653	C	A	C	Hoxc9_MA0485.1	1	1	+	8.787349616382285	8.366866523803898	CCCAATAAATCTG
chr1	167541758	167541759	chr1:167541759:G:A	rs2143300	G	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	167544485	167544486	chr1:167544486:G:A	rs12042693	G	A	g	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	167573291	167573292	chr1:167573292:G:C	rs11802066	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	167634725	167634726	chr1:167634726:G:A	rs1229393	G	A	A	Hoxc9_MA0485.1	1	1	+	8.95315597862345	7.393712404713388	AGTCATAAATTTC
chr1	167697916	167697917	chr1:167697917:C:T	rs73035729	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	167697953	167697954	chr1:167697954:A:G	rs73035732	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	167762437	167762438	chr1:167762438:G:A	rs555394351	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	167856367	167856368	chr1:167856368:A:G	rs2071922	A	G	A	Hoxc9_MA0485.1	6	1	+	9.296356763622768	6.262150997113346	CTCCATAAATCTC
chr1	168008288	168008289	chr1:168008289:C:T	rs12093927	C	T	T	Hoxc9_MA0485.1	10	1	+	9.158362471289733	7.354526566980982	CGTCATAAATCTA
chr1	168137979	168137980	chr1:168137980:A:C	rs4657736	A	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	168286169	168286170	chr1:168286170:A:G	rs74436931	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	168320435	168320436	chr1:168320436:T:C	rs16860371	T	C	T	Hoxc9_MA0485.1	11	1	+	9.807624837409922	8.612224367719863	TGCCATAAATTTC
chr1	168361561	168361562	chr1:168361562:G:C	rs2268559	G	C	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	168454653	168454654	chr1:168454654:G:T	rs141511341	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	168466348	168466349	chr1:168466349:A:T	rs924053159	A	T	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	168488496	168488497	chr1:168488497:G:T	rs12089035	G	T	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	168569579	168569580	chr1:168569580:T:C	rs12062199	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	168826028	168826029	chr1:168826029:G:A	rs61801630	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	169113608	169113609	chr1:169113609:T:G	rs118147419	T	G	T	Hoxc9_MA0485.1	3	1	+	9.485701774499221	4.857558075536153	GCCTGTAAATCAA
chr1	169836407	169836408	chr1:169836408:T:C	rs12119635	T	C	T	Hoxc9_MA0485.1	0	1	-	7.662552246915616	8.195367380206616	AGCCACAAATCAA
chr1	169891057	169891058	chr1:169891058:C:T	rs16862745	C	T	C	Hoxc9_MA0485.1	3	1	+	8.15684316045369	7.268590387431066	AGCCATCAATTTC
chr1	170226465	170226466	chr1:170226466:A:G	rs72700121	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	170262039	170262040	chr1:170262040:A:G	rs188629208	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	170262076	170262077	chr1:170262077:T:C	rs79380455	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	170290627	170290628	chr1:170290628:A:G	rs112458841	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	170437221	170437222	chr1:170437222:C:T	rs12128140	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	170483359	170483360	chr1:170483360:C:T	rs12124515	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	170660792	170660793	chr1:170660793:T:C	rs116677750	T	C	T	Hoxc9_MA0485.1	5	1	+	8.919762874793282	4.434451512154796	GTCCATAAATTAG
chr1	170970606	170970607	chr1:170970607:A:G	rs34355454	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	171084140	171084141	chr1:171084141:G:C	rs77786968	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	171222443	171222444	chr1:171222444:C:T	rs981460	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	171252037	171252038	chr1:171252038:A:T	rs78266892	A	T	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	171287067	171287068	chr1:171287068:A:T	rs10912718	A	T	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	171582361	171582362	chr1:171582362:T:C	rs235493	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	171614325	171614326	chr1:171614326:T:C	rs59135694	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	171686071	171686072	chr1:171686072:T:G	rs73042000	T	G	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	171843410	171843411	chr1:171843411:G:A	rs7546406	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	172054206	172054207	chr1:172054207:C:T	rs6669406	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	172146013	172146014	chr1:172146014:C:T	rs12120556	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	172162345	172162346	chr1:172162346:A:T	rs585823	A	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	172182531	172182532	chr1:172182532:G:T	rs479960	G	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	172287688	172287689	chr1:172287689:C:T	rs2586394	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	172358707	172358708	chr1:172358708:A:G	rs112907030	A	G	A	Hoxc9_MA0485.1	5	1	-	8.378906635474209	3.893595272835724	AGCAATGAATCAA
chr1	172407905	172407906	chr1:172407906:G:A	rs10489282	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	172470139	172470140	chr1:172470140:G:T	rs2213739	G	T	T	Hoxc9_MA0485.1	12	1	-	7.95561190515618	7.111875769407833	GCCTATAAATATC
chr1	172476742	172476743	chr1:172476743:G:A	rs7551242	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	172713760	172713761	chr1:172713761:T:A	rs859623	T	A	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	172756867	172756868	chr1:172756868:G:A	rs149590058	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	172882977	172882978	chr1:172882978:A:G	rs12037781	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	173048345	173048346	chr1:173048346:G:A	rs2236876	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	173122552	173122553	chr1:173122553:G:A	rs72722825	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	173137426	173137427	chr1:173137427:G:A	rs1234311	G	A	G	Hoxc9_MA0485.1	1	1	-	8.634205503874714	7.690405664629847	TCGCATAAATCAC
chr1	173297438	173297439	chr1:173297439:G:A	rs4916319	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	173637707	173637708	chr1:173637708:G:T	rs187501960	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	173672746	173672747	chr1:173672747:G:A	rs58977252	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	173994110	173994111	chr1:173994111:G:A	rs61826778	G	A	g	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	174644250	174644251	chr1:174644251:A:G	rs72715273	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	174777117	174777118	chr1:174777118:G:A	rs115295593	G	A	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	174796307	174796308	chr1:174796308:A:G	rs1793320	A	G	N	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	174842038	174842039	chr1:174842039:G:A	rs1894200	G	A	g	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	174983088	174983089	chr1:174983089:T:C	rs11806870	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	175122846	175122847	chr1:175122847:T:A	rs12087735	T	A	T	Hoxc9_MA0485.1	8	1	-	8.061110969226467	1.159152459091507	TGTCATCAATCTC
chr1	175154852	175154853	chr1:175154853:A:G	rs115524974	A	G	A	Hoxc9_MA0485.1	12	1	-	10.132292852586605	10.386289806351158	TTCCATAAATCAT
chr1	175433847	175433848	chr1:175433848:C:A	rs78592708	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	175573643	175573644	chr1:175573644:A:C	rs1364950115	A	C	A	Hoxc9_MA0485.1	11	1	+	11.720578974284697	9.667589119385616	GGCCATAAATTAC
chr1	175810429	175810430	chr1:175810430:G:C	rs80172535	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	175835034	175835035	chr1:175835035:A:G	rs74129349	A	G	A	Hoxc9_MA0485.1	3	1	+	9.019693273901652	4.238048009486431	TCCAATAAATCTG
chr1	175842078	175842079	chr1:175842079:T:G	rs1052371966	T	G	T	Hoxc9_MA0485.1	11	1	-	8.559158876197435	6.506169021298353	CCCAATAAATTAC
chr1	176624387	176624388	chr1:176624388:G:A	rs12565327	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	176826418	176826419	chr1:176826419:C:T	rs1218519564	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	176942388	176942389	chr1:176942389:T:C	rs6672307	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	177004900	177004901	chr1:177004901:T:C	rs72720704	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	177033903	177033904	chr1:177033904:C:T	rs71628223	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	177033906	177033907	chr1:177033907:G:A	rs71628224	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	177087627	177087628	chr1:177087628:A:G	rs77827784	A	G	A	Hoxc9_MA0485.1	4	1	+	7.856357017099458	6.688593303107875	TGCAATGAATCAA
chr1	177425050	177425051	chr1:177425051:A:G	rs10913339	A	G	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	177818273	177818274	chr1:177818274:T:C	rs74128139	T	C	T	Hoxc9_MA0485.1	5	1	+	8.857717927639479	4.372406565000994	GCCCATAAATAAA
chr1	177976317	177976318	chr1:177976318:A:G	rs10913478	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	177976318	177976319	chr1:177976319:T:A	rs10913479	T	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	178469509	178469510	chr1:178469510:A:G	rs1985761	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	178558951	178558952	chr1:178558952:G:A	rs4652304	G	A	A	Hoxc9_MA0485.1	1	1	+	7.839496806729648	6.280053232819587	CGGCATAAATCTA
chr1	178633182	178633183	chr1:178633183:G:C	rs74130725	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	178657390	178657391	chr1:178657391:T:C	rs2761477	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	179081457	179081458	chr1:179081458:C:A	rs3813640	C	A	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	179081494	179081495	chr1:179081495:T:C	rs148308328	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	179167133	179167134	chr1:179167134:G:C	rs2816189	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	179288239	179288240	chr1:179288240:C:T	rs72713501	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	179296799	179296800	chr1:179296800:G:A	rs2246677	G	A	g	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	179300413	179300414	chr1:179300414:A:T	rs12049237	A	T	A	Hoxc9_MA0485.1	5	1	-	10.273684712530084	3.3751417368104883	GCTAATAAATCAC
chr1	179441026	179441027	chr1:179441027:C:T	rs6693527	C	T	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	179441032	179441033	chr1:179441033:G:A	rs11802637	G	A	g	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	179805029	179805030	chr1:179805030:T:C	rs1148825	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	179816601	179816602	chr1:179816602:G:A	rs2252388	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	179973595	179973596	chr1:179973596:A:G	rs76425715	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	180135138	180135139	chr1:180135139:C:T	rs55971224	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	180182876	180182877	chr1:180182877:C:T	rs117812122	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	180544181	180544182	chr1:180544182:A:G	rs6425647	A	G	G	Hoxc9_MA0485.1	3	1	+	7.591552401453863	2.8099071370386404	GCCAGTCAATCAG
chr1	180633744	180633745	chr1:180633745:A:G	rs6676219	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	180752126	180752127	chr1:180752127:A:G	rs61809357	A	G	A	Hoxc9_MA0485.1	9	1	-	8.673463454080172	1.7852376397065408	TGCCATAAATATT
chr1	180752142	180752143	chr1:180752143:G:A	rs7550031	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	180968980	180968981	chr1:180968981:G:A	rs2002041	G	A	G	Hoxc9_MA0485.1	4	1	+	8.390054393460648	9.557818107452231	GGTTGTAAATCTA
chr1	181045102	181045103	chr1:181045103:C:G	rs3892173	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	181390096	181390097	chr1:181390097:C:T	rs631226	C	T	T	Hoxc9_MA0485.1	4	1	-	8.915753528409413	10.083517242400996	AGCAGTCAATCAC
chr1	181482487	181482488	chr1:181482488:G:A	rs77185697	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	182186627	182186628	chr1:182186628:G:A	rs114049143	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	182244730	182244731	chr1:182244731:A:T	rs116669604	A	T	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr1	182382885	182382886	chr1:182382886:C:T	chr1:182382886:C:T	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	182431077	182431078	chr1:182431078:A:C	rs11585935	A	C	a	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	182676400	182676401	chr1:182676401:G:A	rs77152747	G	A	g	Hoxc9_MA0485.1	4	1	+	8.106939753386	9.274703467377583	TTCCGTAAATCTT
chr1	182681100	182681101	chr1:182681101:G:A	rs114424089	G	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	183243412	183243413	chr1:183243413:T:G	rs3768593	T	G	G	Hoxc9_MA0485.1	9	1	+	8.673463454080172	1.7852376397065408	TGCCATAAATATT
chr1	183304908	183304909	chr1:183304909:A:C	chr1:183304909:A:C	A	C	A	Hoxc9_MA0485.1	2	1	-	11.893399447667672	10.574533783107588	GGTCATAAATCAT
chr1	183488062	183488063	chr1:183488063:A:G	rs2702205	A	G	A	Hoxc9_MA0485.1	4	1	+	8.272147801699	7.104384087707417	TAACATAAATCAG
chr1	183699670	183699671	chr1:183699671:G:A	rs12753772	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	184194499	184194500	chr1:184194500:T:G	rs4651181	T	G	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	184199675	184199676	chr1:184199676:G:A	rs10752934	G	A	A	Hoxc9_MA0485.1	1	1	-	10.019687758765532	9.075887919520667	GCTAATAAATCAT
chr1	184491691	184491692	chr1:184491692:T:C	rs10797970	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	184577428	184577429	chr1:184577429:C:T	rs4651222	C	T	C	Hoxc9_MA0485.1	10	1	+	9.284042828123203	7.480206923814452	CGTCATAAATCTG
chr1	184622356	184622357	chr1:184622357:G:A	chr1:184622357:G:A	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	184791298	184791299	chr1:184791299:C:T	rs7360	C	T	C	Hoxc9_MA0485.1	2	1	+	8.546591587395653	7.169573110234427	TGCTATGAATCAC
chr1	185550662	185550663	chr1:185550663:A:C	rs4142138	A	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	185608511	185608512	chr1:185608512:C:T	rs114055497	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	185862410	185862411	chr1:185862411:G:A	rs74134304	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr1	186153281	186153282	chr1:186153282:T:C	rs17466086	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	186153398	186153399	chr1:186153399:A:C	rs10911835	A	C	A	Hoxc9_MA0485.1	3	1	+	9.261927201400683	9.996678408971151	GGCAATAAATAAA
chr1	186375788	186375789	chr1:186375789:T:A	rs112597707	T	A	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	186579484	186579485	chr1:186579485:T:C	rs10911890	T	C	C	Hoxc9_MA0485.1	4	1	-	9.451982695848365	8.284218981856782	TGCCATCAATCAA
chr1	186976877	186976878	chr1:186976878:A:G	rs6690278	A	G	G	Hoxc9_MA0485.1	4	1	+	11.614581268141224	10.446817554149641	AGTCATAAATCAC
chr1	187210571	187210572	chr1:187210572:A:G	rs2224908	A	G	A	Hoxc9_MA0485.1	5	1	-	7.219804085818885	2.7344927231803995	CCCCATGAATCAA
chr1	187265125	187265126	chr1:187265126:G:A	rs71635408	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	187309208	187309209	chr1:187309209:C:T	rs28564829	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr1	187786576	187786577	chr1:187786577:C:G	rs35057028	C	G	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	187908965	187908966	chr1:187908966:A:G	rs6692579	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	188281530	188281531	chr1:188281531:A:G	rs12029148	A	G	A	Hoxc9_MA0485.1	12	1	+	8.072017392661063	8.197697749494534	AGCAGTCAATCAA
chr1	188427912	188427913	chr1:188427913:G:A	rs12059516	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	188707014	188707015	chr1:188707015:G:T	rs34021640	G	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	188707023	188707024	chr1:188707024:C:A	rs116138426	C	A	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	188707042	188707043	chr1:188707043:T:C	rs573094556	T	C	T	Hoxc9_MA0485.1	1	1	-	9.121759799698015	10.681203373608076	AACAATAAATCTG
chr1	189015935	189015936	chr1:189015936:C:A	rs4442366	C	A	A	Hoxc9_MA0485.1	12	1	-	8.439259780342132	8.903318605492458	GAATATAAATCAG
chr1	189313671	189313672	chr1:189313672:G:A	rs1361011	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	189522773	189522774	chr1:189522774:C:T	rs12143034	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	189983478	189983479	chr1:189983479:T:C	rs10920249	T	C	t	Hoxc9_MA0485.1	5	1	+	8.715258818649007	4.229947456010522	AGCAATAAATATC
chr1	190707949	190707950	chr1:190707950:C:G	rs1325223	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	191127048	191127049	chr1:191127049:T:C	rs11811792	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	191127096	191127097	chr1:191127097:C:T	rs1902036	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	191222271	191222272	chr1:191222272:A:C	rs2368571	A	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	191346287	191346288	chr1:191346288:C:T	rs1246720	C	T	T	Hoxc9_MA0485.1	10	1	+	8.90996022303787	7.10612431872912	AGCCATAAAACAT
chr1	191621211	191621212	chr1:191621212:C:T	rs61818794	C	T	C	Hoxc9_MA0485.1	12	1	+	7.732059938154666	7.478062984390116	TGCCATAAATACC
chr1	191663067	191663068	chr1:191663068:A:G	rs1336864	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	192420059	192420060	chr1:192420060:G:C	rs6665478	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	192636376	192636377	chr1:192636377:C:G	rs4233424	C	G	G	Hoxc9_MA0485.1	10	1	+	11.580797353905073	6.779726546157794	TGCTATAAATCAC
chr1	192678768	192678769	chr1:192678769:G:T	rs2208960	G	T	t	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	192834675	192834676	chr1:192834676:A:C	rs35000062	A	C	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	193644918	193644919	chr1:193644919:C:T	rs7553889	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	193789686	193789687	chr1:193789687:T:G	rs1328181	T	G	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	194289762	194289763	chr1:194289763:T:C	rs141063818	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	194516358	194516359	chr1:194516359:G:C	rs6675873	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	195082466	195082467	chr1:195082467:C:A	rs1466657	C	A	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	195466497	195466498	chr1:195466498:A:G	rs7517359	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	195849100	195849101	chr1:195849101:T:C	rs10801473	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	196071776	196071777	chr1:196071777:G:T	rs5009971	G	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	196098470	196098471	chr1:196098471:G:A	rs1253571898	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	196464826	196464827	chr1:196464827:G:C	rs77152348	G	C	G	Hoxc9_MA0485.1	0	1	+	9.86600939389301	8.578300984707889	GTCCATAAATCTG
chr1	196543463	196543464	chr1:196543464:C:G	rs4618911	C	G	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	196809728	196809729	chr1:196809729:C:T	rs1738736	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	196891604	196891605	chr1:196891605:G:A	rs7367184	G	A	G	Hoxc9_MA0485.1	0	1	-	8.582188639422165	8.814532296941533	CATCATAAATCAG
chr1	197352309	197352310	chr1:197352310:C:T	rs10922200	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	197352320	197352321	chr1:197352321:A:G	rs10922201	A	G	A	Hoxc9_MA0485.1	8	1	+	10.358662752745886	3.456704242610928	GACTATAAATCAG
chr1	198023481	198023482	chr1:198023482:G:A	rs538048156	G	A	G	Hoxc9_MA0485.1	11	1	-	8.433363654948591	9.62876412463865	TCCCATAAATCCA
chr1	198086362	198086363	chr1:198086363:T:C	rs1233817	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	198185977	198185978	chr1:198185978:T:C	rs7526330	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	198255121	198255122	chr1:198255122:G:A	rs12060034	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	198359420	198359421	chr1:198359421:T:C	rs10922406	T	C	T	Hoxc9_MA0485.1	9	1	+	8.469923168155733	1.5816973537821015	GAACATAAATCTG
chr1	198487148	198487149	chr1:198487149:G:A	rs10801673	G	A	A	Hoxc9_MA0485.1	3	1	-	8.456508282588695	7.568255509566073	CATCATAAATCAA
chr1	198487149	198487150	chr1:198487150:A:G	rs12025404	A	G	A	Hoxc9_MA0485.1	2	1	-	8.456508282588695	9.833526759749917	CATCATAAATCAA
chr1	198487162	198487163	chr1:198487163:A:T	rs10801674	A	T	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	198602150	198602151	chr1:198602151:G:A	rs965266869	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	198762288	198762289	chr1:198762289:G:A	rs4915158	G	A	A	Hoxc9_MA0485.1	1	1	+	10.46276217940252	8.903318605492458	GGATATAAATCAT
chr1	198796621	198796622	chr1:198796622:C:A	rs2759644	C	A	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	198874871	198874872	chr1:198874872:T:A	rs2181371	T	A	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	199113515	199113516	chr1:199113516:A:G	rs1034630032	A	G	A	Hoxc9_MA0485.1	1	1	+	7.968363925095931	9.527807499005991	TACTATAAATCCC
chr1	199149584	199149585	chr1:199149585:G:A	rs16844287	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	199226456	199226457	chr1:199226457:C:T	rs7551857	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	199377376	199377377	chr1:199377377:G:A	rs79085061	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	199415868	199415869	chr1:199415869:T:A	rs72747220	T	A	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	199415875	199415876	chr1:199415876:T:A	rs72747222	T	A	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	199743408	199743409	chr1:199743409:A:G	rs142249035	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	199989632	199989633	chr1:199989633:A:G	rs10800663	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	200104229	200104230	chr1:200104230:T:C	rs186406018	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	200247712	200247713	chr1:200247713:G:A	chr1:200247713:G:A	G	A	g	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	200373696	200373697	chr1:200373697:C:A	rs2153280	C	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	200410151	200410152	chr1:200410152:G:A	rs10127913	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	200525604	200525605	chr1:200525605:A:T	rs115994070	A	T	A	Hoxc9_MA0485.1	11	1	+	7.45806200711048	6.600472621901457	CTGCATAAATCAC
chr1	200529418	200529419	chr1:200529419:T:A	rs190086825	T	A	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	200781447	200781448	chr1:200781448:G:A	rs7520287	G	A	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	200796314	200796315	chr1:200796315:C:G	rs10800735	C	G	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	200880490	200880491	chr1:200880491:G:T	rs11799920	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	200936157	200936158	chr1:200936158:G:T	rs539038815	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	200936206	200936207	chr1:200936207:G:A	rs116038348	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr1	201027060	201027061	chr1:201027061:C:A	rs6427870	C	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	201129605	201129606	chr1:201129606:G:T	rs184961284	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	201180840	201180841	chr1:201180841:T:G	rs831765	T	G	T	Hoxc9_MA0485.1	12	1	-	8.33460687992455	9.1783430156729	CCACATAAATCAA
chr1	201258837	201258838	chr1:201258838:C:T	rs74136363	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	201258853	201258854	chr1:201258854:G:A	rs12139554	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	201451109	201451110	chr1:201451110:A:G	chr1:201451110:A:G	A	G	A	Hoxc9_MA0485.1	9	1	-	9.415408536680161	2.52718272230653	GGCTGTAAATCCC
chr1	201451124	201451125	chr1:201451125:C:G	rs780453743	C	G	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	201829521	201829522	chr1:201829522:T:A	rs11585549	T	A	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	201986900	201986901	chr1:201986901:C:T	rs61821529	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	202129686	202129687	chr1:202129687:T:C	rs190657896	T	C	T	Hoxc9_MA0485.1	9	1	-	7.110967321903343	4.050384076029736	AGCCATAAAACCC
chr1	202578209	202578210	chr1:202578210:A:G	rs562281998	A	G	A	Hoxc9_MA0485.1	11	1	+	10.870260698619227	6.457727299750856	GGAAATAAATCAC
chr1	202804973	202804974	chr1:202804974:T:C	rs4553255	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	203062642	203062643	chr1:203062643:T:C	rs112656610	T	C	t	Hoxc9_MA0485.1	0	1	+	8.641407558427671	8.409063900908302	TGCCATAAAACAC
chr1	203062673	203062674	chr1:203062674:G:A	rs1451649026	G	A	c	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	203071793	203071794	chr1:203071794:G:T	rs2270541	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	203077546	203077547	chr1:203077547:G:C	rs3737880	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	203239567	203239568	chr1:203239568:G:T	rs10920589	G	T	T	Hoxc9_MA0485.1	10	1	-	7.982037373932928	5.298037040058978	TGCAATGAATCAG
chr1	203272298	203272299	chr1:203272299:C:A	rs17533379	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	203414973	203414974	chr1:203414974:T:C	rs2365601	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	203452275	203452276	chr1:203452276:G:A	rs76716918	G	A	G	Hoxc9_MA0485.1	10	1	-	9.075646906357997	7.271811002049245	ACACATAAATCTC
chr1	203544473	203544474	chr1:203544474:G:C	rs4258271	G	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	203671255	203671256	chr1:203671256:G:A	rs1394097206	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	203702150	203702151	chr1:203702151:C:T	rs78969040	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	203934224	203934225	chr1:203934225:C:G	rs2810652	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	203934227	203934228	chr1:203934228:G:T	rs2810651	G	T	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	204001407	204001408	chr1:204001408:G:T	rs56354187	G	T	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	204021125	204021126	chr1:204021126:C:A	rs76285481	C	A	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	204057987	204057988	chr1:204057988:G:A	rs7513006	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	204240560	204240561	chr1:204240561:A:C	rs4951052	A	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	204456923	204456924	chr1:204456924:A:C	rs2999490	A	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	204528363	204528364	chr1:204528364:C:G	rs1476525954	C	G	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	205048074	205048075	chr1:205048075:A:G	rs76234711	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	205246194	205246195	chr1:205246195:A:C	rs144507208	A	C	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	205351299	205351300	chr1:205351300:A:T	rs55962699	A	T	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	205354785	205354786	chr1:205354786:A:C	rs140922296	A	C	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	205488358	205488359	chr1:205488359:A:T	chr1:205488359:A:T	A	T	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	205519854	205519855	chr1:205519855:G:A	rs55675283	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	205519870	205519871	chr1:205519871:G:A	rs12404390	G	A	G	Hoxc9_MA0485.1	2	1	-	10.574566786183365	9.19754830902214	AACCATAAATCTC
chr1	205611187	205611188	chr1:205611188:T:C	rs4573566	T	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	205642951	205642952	chr1:205642952:T:G	rs12744379	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	205656057	205656058	chr1:205656058:G:A	rs11240546	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	205688248	205688249	chr1:205688249:T:C	rs76012422	T	C	T	Hoxc9_MA0485.1	11	1	+	9.505405395297164	8.310004925607105	CCCAATAAATCTC
chr1	205927346	205927347	chr1:205927347:C:T	rs7366204	C	T	T	Hoxc9_MA0485.1	4	1	-	8.858760848879294	10.026524562870877	GGAAGTAAATCAA
chr1	206066697	206066698	chr1:206066698:G:A	rs142180251	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	206562528	206562529	chr1:206562529:C:G	rs2336942	C	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	206562531	206562532	chr1:206562532:G:A	rs80229444	G	A	G	Hoxc9_MA0485.1	12	1	-	6.534704335622896	6.280707381858345	GGCAGTGAATCCC
chr1	206696324	206696325	chr1:206696325:C:T	rs140479798	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	206815187	206815188	chr1:206815188:A:G	rs12044804	A	G	A	Hoxc9_MA0485.1	9	1	-	7.936531983790618	1.0483061694169864	AGCCATAAATGAT
chr1	206815200	206815201	chr1:206815201:T:G	rs951747227	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	206937017	206937018	chr1:206937018:A:G	rs748140	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	206940691	206940692	chr1:206940692:A:G	rs291090	A	G	A	Hoxc9_MA0485.1	4	1	+	8.242660345860306	7.074896631868725	TGACATAAATCCT
chr1	207791519	207791520	chr1:207791520:C:T	rs41318003	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	207806300	207806301	chr1:207806301:A:C	rs144470755	A	C	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	207863487	207863488	chr1:207863488:A:T	rs957380227	A	T	A	Hoxc9_MA0485.1	4	1	+	8.109113470608335	4.440498228291737	GCCAATAAATATC
chr1	208035716	208035717	chr1:208035717:A:T	rs600278	A	T	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr1	208158303	208158304	chr1:208158304:A:C	rs11118996	A	C	A	Hoxc9_MA0485.1	7	1	+	7.1037684953659594	0.19953942616038017	TCCCATCAATCCC
chr1	208245885	208245886	chr1:208245886:G:A	rs1621023	G	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	208462858	208462859	chr1:208462859:G:A	rs55970022	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	208594354	208594355	chr1:208594355:A:C	rs4844697	A	C	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	208756440	208756441	chr1:208756441:A:C	rs11803397	A	C	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	208768049	208768050	chr1:208768050:G:T	rs6690048	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	209203116	209203117	chr1:209203117:T:C	rs958485379	T	C	T	Hoxc9_MA0485.1	5	1	+	8.681550251245836	4.1962388886073505	GTCAGTAAATCTC
chr1	209486024	209486025	chr1:209486025:T:C	rs12072559	T	C	C	Hoxc9_MA0485.1	11	1	-	9.211401558482814	4.798868159614446	AATCATAAATCAA
chr1	209692998	209692999	chr1:209692999:A:T	rs190115625	A	T	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	209788066	209788067	chr1:209788067:A:G	rs79863693	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	209931397	209931398	chr1:209931398:A:T	rs4844502	A	T	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	210107499	210107500	chr1:210107500:T:A	rs10863810	T	A	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	210214732	210214733	chr1:210214733:C:G	rs75568054	C	G	c	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	210374064	210374065	chr1:210374065:T:C	rs952949452	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	210374107	210374108	chr1:210374108:G:A	rs77816980	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	210377194	210377195	chr1:210377195:T:A	rs7355019	T	A	T	Hoxc9_MA0485.1	11	1	-	10.273684712530084	9.416095327321061	GCTAATAAATCAC
chr1	210378198	210378199	chr1:210378199:C:T	rs12060228	C	T	C	Hoxc9_MA0485.1	4	1	-	10.36010129806117	11.527865012052754	GCCCGTAAATCTC
chr1	210598459	210598460	chr1:210598460:G:A	rs76660284	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	211229160	211229161	chr1:211229161:G:C	rs11806910	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	211564304	211564305	chr1:211564305:T:C	rs9430071	T	C	T	Hoxc9_MA0485.1	8	1	-	7.980614853500806	1.0786563433658467	CTCCATCAATCAC
chr1	211597973	211597974	chr1:211597974:A:G	rs1161354209	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	211598688	211598689	chr1:211598689:C:T	rs6692675	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	211610266	211610267	chr1:211610267:C:A	rs9429875	C	A	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	211666935	211666936	chr1:211666936:T:C	rs1542140	T	C	T	Hoxc9_MA0485.1	12	1	+	10.616263744854674	10.870260698619227	GGAAATAAATCAT
chr1	211925117	211925118	chr1:211925118:T:G	rs2970578	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	212004920	212004921	chr1:212004921:C:T	rs61828532	C	T	C	Hoxc9_MA0485.1	0	1	-	7.912930092479393	7.380114959188391	GTCCATTAATCAC
chr1	212033829	212033830	chr1:212033830:C:A	rs2970588	C	A	C	Hoxc9_MA0485.1	10	1	+	8.276448055348489	5.59244772147454	GCCTGTAAATCCC
chr1	212201993	212201994	chr1:212201994:G:A	rs1967114	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	212284780	212284781	chr1:212284781:C:T	rs351412	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	212284784	212284785	chr1:212284785:C:T	rs76606646	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	212355526	212355527	chr1:212355527:C:T	rs12133636	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	212529380	212529381	chr1:212529381:G:C	rs6659881	G	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	212584315	212584316	chr1:212584316:T:C	rs4543871	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	212586839	212586840	chr1:212586840:C:T	rs34004542	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	212586843	212586844	chr1:212586844:A:G	rs36061296	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	212681911	212681912	chr1:212681912:T:C	rs59877390	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	212860299	212860300	chr1:212860300:T:A	rs11120049	T	A	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	213167033	213167034	chr1:213167034:G:A	rs7517229	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	213300652	213300653	chr1:213300653:C:G	rs75366269	C	G	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	213484519	213484520	chr1:213484520:A:G	rs320471	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	213484560	213484561	chr1:213484561:C:G	rs320472	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	213586368	213586369	chr1:213586369:G:T	rs11120162	G	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	213668291	213668292	chr1:213668292:T:G	rs12031139	T	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr1	214003525	214003526	chr1:214003526:G:A	rs4282786	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr1	214188317	214188318	chr1:214188318:A:G	rs2919490	A	G	A	Hoxc9_MA0485.1	4	1	+	9.27709979069694	8.109336076705357	TCCCATAAATCCC
chr1	214188340	214188341	chr1:214188341:C:T	rs2196945	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	214374594	214374595	chr1:214374595:G:T	rs7532953	G	T	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	214456272	214456273	chr1:214456273:A:G	rs12757404	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	214456296	214456297	chr1:214456297:T:C	rs6667098	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	214456297	214456298	chr1:214456298:G:A	rs12736454	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	214542825	214542826	chr1:214542826:G:C	rs67483753	G	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	214549876	214549877	chr1:214549877:C:T	rs4072933	C	T	C	Hoxc9_MA0485.1	1	1	-	8.636120044370852	7.076676470460792	AGAAATAAATCTA
chr1	214589167	214589168	chr1:214589168:C:T	rs1877148	C	T	T	Hoxc9_MA0485.1	2	1	+	7.842503767638783	6.4654852904775595	TGCAATGAATCTC
chr1	214840337	214840338	chr1:214840338:G:A	rs11577648	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	215022924	215022925	chr1:215022925:A:G	rs2601622	A	G	G	Hoxc9_MA0485.1	4	1	+	8.788883591126657	7.621119877135077	GGCCATGAATCTA
chr1	216140994	216140995	chr1:216140995:C:T	rs80274141	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	216183589	216183590	chr1:216183590:C:T	rs74619558	C	T	C	Hoxc9_MA0485.1	0	1	-	7.794324970362719	7.261509837071716	GGGCATGAATCAC
chr1	216557044	216557045	chr1:216557045:T:C	rs10863254	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	216889415	216889416	chr1:216889416:G:C	rs2576268	G	C	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	217052449	217052450	chr1:217052450:G:A	rs17045085	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	217240961	217240962	chr1:217240962:C:G	rs7543660	C	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr1	217388944	217388945	chr1:217388945:C:T	rs1497835	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	217578279	217578280	chr1:217578280:G:T	rs11117886	G	T	G	Hoxc9_MA0485.1	3	1	-	7.468714223815311	6.73396301624484	GCCCGTCAATCTG
chr1	217590870	217590871	chr1:217590871:G:A	rs57789996	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	217600120	217600121	chr1:217600121:G:T	rs12116726	G	T	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	217682021	217682022	chr1:217682022:A:G	rs116386843	A	G	G	Hoxc9_MA0485.1	9	1	-	9.278591122091859	2.3903653077182265	TATCATAAATCAT
chr1	217867931	217867932	chr1:217867932:G:A	chr1:217867932:G:A	G	A	G	Hoxc9_MA0485.1	2	1	-	10.706903350446442	9.32988487328522	GTCAATAAATCAC
chr1	217877168	217877169	chr1:217877169:C:T	rs11117963	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr1	217965138	217965139	chr1:217965139:G:A	rs10863361	G	A	A	Hoxc9_MA0485.1	1	1	+	8.686356696916121	7.12691312300606	CGTCATCAATCAC
chr1	218049862	218049863	chr1:218049863:G:A	rs12729245	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	218304947	218304948	chr1:218304948:T:C	chr1:218304948:T:C	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	218345142	218345143	chr1:218345143:A:G	rs933965340	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	218494302	218494303	chr1:218494303:C:T	rs56391225	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	218497014	218497015	chr1:218497015:T:C	rs622912	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	218517605	218517606	chr1:218517606:G:A	rs550238	G	A	G	Hoxc9_MA0485.1	1	1	+	8.124442473587784	6.564998899677724	GGTAATGAATCAT
chr1	218665489	218665490	chr1:218665490:C:T	rs1304589	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	218665533	218665534	chr1:218665534:C:T	rs4558049	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	218779577	218779578	chr1:218779578:C:T	rs6541208	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	219067190	219067191	chr1:219067191:G:C	rs183804194	G	C	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr1	219067627	219067628	chr1:219067628:A:G	rs1256603	A	G	G	Hoxc9_MA0485.1	8	1	+	7.389785501429792	0.48782699129483303	GGCCATAAAACCT
chr1	219217862	219217863	chr1:219217863:T:C	rs1568804	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	219444692	219444693	chr1:219444693:A:G	rs12747505	A	G	a	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	219581467	219581468	chr1:219581468:C:A	rs1177148691	C	A	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	219825383	219825384	chr1:219825384:C:T	rs11118428	C	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	219926727	219926728	chr1:219926728:A:G	rs7525274	A	G	G	Hoxc9_MA0485.1	5	1	-	10.019687758765532	5.534376396127047	GCTAATAAATCAT
chr1	219961387	219961388	chr1:219961388:C:G	rs187334075	C	G	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	219961410	219961411	chr1:219961411:A:G	rs11118473	A	G	G	Hoxc9_MA0485.1	0	1	-	9.15675835026504	8.924414692745673	TCCCATCAATCAC
chr1	220059454	220059455	chr1:220059455:C:T	rs904328	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr1	220334237	220334238	chr1:220334238:G:A	rs17641611	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	220785958	220785959	chr1:220785959:T:C	rs12031951	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	221141617	221141618	chr1:221141618:C:T	rs192319574	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	221285143	221285144	chr1:221285144:G:A	rs35111176	G	A	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	221431961	221431962	chr1:221431962:G:A	rs1031675	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	221478289	221478290	chr1:221478290:C:G	chr1:221478290:C:G	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	221568106	221568107	chr1:221568107:T:C	rs2009200	T	C	T	Hoxc9_MA0485.1	6	1	-	9.023728676761683	5.989522910252264	GACTATAAATCCC
chr1	221634691	221634692	chr1:221634692:C:T	rs1342088	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	221670107	221670108	chr1:221670108:A:G	rs191342479	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	221720703	221720704	chr1:221720704:C:T	rs10779454	C	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	221757872	221757873	chr1:221757873:T:G	rs34104857	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	221802619	221802620	chr1:221802620:A:T	rs61823537	A	T	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	221829866	221829867	chr1:221829867:C:T	rs142649478	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	222040713	222040714	chr1:222040714:T:C	rs17011253	T	C	T	Hoxc9_MA0485.1	4	1	-	8.554522583306248	7.386758869314666	GGCTATAAAACAT
chr1	222073633	222073634	chr1:222073634:A:G	rs57701818	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	222225427	222225428	chr1:222225428:A:G	rs79769199	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	222225436	222225437	chr1:222225437:T:A	rs963335157	T	A	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	222387159	222387160	chr1:222387160:T:C	rs35864991	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	222464690	222464691	chr1:222464691:T:G	rs890213965	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	222644293	222644294	chr1:222644294:G:A	rs192868014	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	222644327	222644328	chr1:222644328:C:T	rs61824281	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	222730486	222730487	chr1:222730487:T:G	rs115507586	T	G	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	222804732	222804733	chr1:222804733:G:C	rs72742211	G	C	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	223049269	223049270	chr1:223049270:A:G	rs6604998	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	223085285	223085286	chr1:223085286:C:A	rs28557250	C	A	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	223175170	223175171	chr1:223175171:G:C	rs189813008	G	C	G	Hoxc9_MA0485.1	3	1	-	9.300244418337044	3.7838479463513517	CATCATAAATCAC
chr1	223208028	223208029	chr1:223208029:G:A	rs73120265	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	223463772	223463773	chr1:223463773:G:A	rs6668903	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	223500747	223500748	chr1:223500748:C:T	rs6702233	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr1	223500775	223500776	chr1:223500776:G:T	rs570011122	G	T	g	Hoxc9_MA0485.1	24	0	+	0	0	.
chr1	223690730	223690731	chr1:223690731:T:C	rs6676027	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	223690738	223690739	chr1:223690739:C:T	rs6668514	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	223691066	223691067	chr1:223691067:T:C	rs6676365	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	224379301	224379302	chr1:224379302:G:A	rs4654037	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	224499496	224499497	chr1:224499497:T:A	rs1891244	T	A	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	224732723	224732724	chr1:224732724:G:A	rs550174875	G	A	G	Hoxc9_MA0485.1	3	1	-	7.912930092479393	7.02467731945677	GTCCATTAATCAC
chr1	224747666	224747667	chr1:224747667:A:G	rs2662932	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	224873714	224873715	chr1:224873715:C:T	rs114521912	C	T	C	Hoxc9_MA0485.1	11	1	+	8.195305659119041	9.3907061288091	TGTCATAAATCCA
chr1	224873726	224873727	chr1:224873727:A:G	rs2800230	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	224881275	224881276	chr1:224881276:T:C	rs2802737	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	224998424	224998425	chr1:224998425:C:T	rs76096089	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	225612417	225612418	chr1:225612418:T:C	rs71646728	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	225696098	225696099	chr1:225696099:C:T	rs372761705	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr1	225707821	225707822	chr1:225707822:G:A	rs114369248	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	225745429	225745430	chr1:225745430:C:T	rs111793934	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	225756171	225756172	chr1:225756172:C:T	rs10915871	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	225897430	225897431	chr1:225897431:T:C	rs959680695	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	225970842	225970843	chr1:225970843:G:C	rs6426092	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	226511983	226511984	chr1:226511984:G:A	rs668222	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr1	226635482	226635483	chr1:226635483:C:T	rs115981659	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	226654532	226654533	chr1:226654533:C:T	rs3820637	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	226677256	226677257	chr1:226677257:G:A	rs697847	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr1	227071950	227071951	chr1:227071951:T:C	rs10495264	T	C	T	Hoxc9_MA0485.1	4	1	-	9.089569058495043	7.92180534450346	TGCCATAAATTTG
chr1	227072428	227072429	chr1:227072429:G:A	rs10495262	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	227269211	227269212	chr1:227269212:A:C	rs145404541	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	227891490	227891491	chr1:227891491:C:T	rs10799454	C	T	C	Hoxc9_MA0485.1	4	1	-	8.973868499340643	10.141632213332226	CGTCGTAAATCAG
chr1	228146151	228146152	chr1:228146152:C:T	rs116587525	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr1	228245285	228245286	chr1:228245286:G:C	rs1757129	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr1	228425350	228425351	chr1:228425351:T:C	rs1188474	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	228515587	228515588	chr1:228515588:A:G	rs1925714	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	228811469	228811470	chr1:228811470:C:G	rs74141348	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr1	228903103	228903104	chr1:228903104:T:A	rs10916377	T	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	229197233	229197234	chr1:229197234:G:C	rs2379987	G	C	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr1	229836568	229836569	chr1:229836569:C:T	rs74485460	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	229845875	229845876	chr1:229845876:G:T	rs528425	G	T	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	229941298	229941299	chr1:229941299:A:G	rs7529116	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	229970795	229970796	chr1:229970796:T:A	rs74145406	T	A	-	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	229990982	229990983	chr1:229990983:A:G	rs11585757	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	230056347	230056348	chr1:230056348:C:T	rs10082048	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr1	230131475	230131476	chr1:230131476:A:C	rs7544981	A	C	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	230248138	230248139	chr1:230248139:A:G	rs16851202	A	G	A	Hoxc9_MA0485.1	4	1	+	8.880777032330062	7.713013318338481	AGCCATAAATTCT
chr1	230263560	230263561	chr1:230263561:A:C	rs41271491	A	C	A	Hoxc9_MA0485.1	5	1	-	7.127857551754644	0.22931457603504818	TGCCATGAATCCT
chr1	230308154	230308155	chr1:230308155:C:A	rs149182965	C	A	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	230314678	230314679	chr1:230314679:G:A	rs1051819	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	230360055	230360056	chr1:230360056:G:A	rs151256889	G	A	G	Hoxc9_MA0485.1	4	1	+	7.592671877906578	8.76043559189816	AGCCGTCAATTAT
chr1	230360272	230360273	chr1:230360273:T:C	rs140486792	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr1	230621233	230621234	chr1:230621234:G:A	rs76780797	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	230878669	230878670	chr1:230878670:A:G	rs141824845	A	G	A	Hoxc9_MA0485.1	12	1	-	9.920091263390889	10.174088217155441	ATCAATAAATCAT
chr1	230910939	230910940	chr1:230910940:G:A	rs4846877	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	231063482	231063483	chr1:231063483:G:A	rs76342659	G	A	g	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr1	231063519	231063520	chr1:231063520:T:A	rs78542952	T	A	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr1	231068958	231068959	chr1:231068959:G:C	rs10864664	G	C	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	231106525	231106526	chr1:231106526:G:A	rs113071459	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	231338262	231338263	chr1:231338263:C:A	rs908734930	C	A	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	231827489	231827490	chr1:231827490:T:C	rs143535752	T	C	T	Hoxc9_MA0485.1	4	1	-	7.887200619593238	6.719436905601653	AGCCATAACTCAT
chr1	231827854	231827855	chr1:231827855:C:T	rs1000730	C	T	C	Hoxc9_MA0485.1	0	1	-	9.728828205745925	9.196013072454924	GGCCATAAATATT
chr1	232039521	232039522	chr1:232039522:A:G	rs11122396	A	G	G	Hoxc9_MA0485.1	4	1	+	7.887200619593238	6.719436905601653	AGCCATAACTCAT
chr1	232090860	232090861	chr1:232090861:C:T	rs138033815	C	T	C	Hoxc9_MA0485.1	1	1	-	8.549291620552735	6.989848046642674	CGTAATAAATCTG
chr1	232175235	232175236	chr1:232175236:T:C	rs9729406	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	232175273	232175274	chr1:232175274:C:T	rs9727900	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	232227794	232227795	chr1:232227795:G:A	rs9725780	G	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	232319656	232319657	chr1:232319657:C:T	rs1338519	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr1	232319670	232319671	chr1:232319671:A:G	rs16856809	A	G	A	Hoxc9_MA0485.1	8	1	+	9.004827922296851	2.102869412161892	AACCATCAATCAT
chr1	232435635	232435636	chr1:232435636:T:C	rs6424230	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr1	232445500	232445501	chr1:232445501:C:G	rs1409369	C	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	232472554	232472555	chr1:232472555:C:T	rs73095113	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr1	232487309	232487310	chr1:232487310:C:A	rs10910542	C	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	232521900	232521901	chr1:232521901:T:C	rs35186494	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr1	232551392	232551393	chr1:232551393:T:C	rs16857636	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	232822972	232822973	chr1:232822973:A:T	rs2814537	A	T	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	233241842	233241843	chr1:233241843:A:G	rs11809254	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	233254087	233254088	chr1:233254088:T:C	rs150891284	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	233261619	233261620	chr1:233261620:G:T	rs12122968	G	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	233359702	233359703	chr1:233359703:A:C	chr1:233359703:A:C	A	C	A	Hoxc9_MA0485.1	5	1	-	7.685676972277174	0.7871339965575781	GGCTGTTAATCAT
chr1	233395106	233395107	chr1:233395107:T:C	rs116372142	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	233494498	233494499	chr1:233494499:T:A	rs6424204	T	A	A	Hoxc9_MA0485.1	0	1	-	9.304567827362465	8.782018208987713	AGTTGTAAATCAT
chr1	233494513	233494514	chr1:233494514:A:C	rs10910191	A	C	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr1	233544384	233544385	chr1:233544385:C:T	rs780239	C	T	T	Hoxc9_MA0485.1	2	1	-	8.30663905364851	9.083120222966064	GGGCATAAATTAG
chr1	234030309	234030310	chr1:234030310:T:C	rs4575150	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	234116219	234116220	chr1:234116220:G:A	rs10910343	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	234127772	234127773	chr1:234127773:G:A	rs12121314	G	A	G	Hoxc9_MA0485.1	10	1	-	8.418857626120557	6.615021721811806	GCTTATAAATCTA
chr1	234279109	234279110	chr1:234279110:T:C	rs111483981	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	234279397	234279398	chr1:234279398:C:G	rs12045858	C	G	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr1	234518834	234518835	chr1:234518835:G:C	rs12066986	G	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	234536240	234536241	chr1:234536241:A:C	rs28537154	A	C	t	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	234553763	234553764	chr1:234553764:T:C	rs56315728	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	234745886	234745887	chr1:234745887:G:A	rs150652010	G	A	G	Hoxc9_MA0485.1	0	1	+	7.946851851746945	7.414036718455942	GCTTATCAATCAC
chr1	234943166	234943167	chr1:234943167:C:A	rs908321	C	A	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	234957182	234957183	chr1:234957183:C:T	rs73121187	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	234957195	234957196	chr1:234957196:T:C	rs2674001	T	C	T	Hoxc9_MA0485.1	5	1	+	8.386488197343793	3.9011768347053057	GGCCCTAAATCAC
chr1	234964898	234964899	chr1:234964899:A:G	rs74148621	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr1	235011921	235011922	chr1:235011922:C:G	rs28548819	C	G	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	235090845	235090846	chr1:235090846:G:A	rs75992195	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	235103240	235103241	chr1:235103241:C:G	rs3934953	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr1	235304617	235304618	chr1:235304618:T:C	rs11583468	T	C	T	Hoxc9_MA0485.1	9	1	+	11.32680040014052	4.438574585766889	TGCTATAAATCAT
chr1	235304624	235304625	chr1:235304625:C:T	rs7553200	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	235331655	235331656	chr1:235331656:A:G	rs10802624	A	G	A	Hoxc9_MA0485.1	5	1	-	7.95755486679683	3.472243504158344	AGCTATGAATCTT
chr1	235374343	235374344	chr1:235374344:G:T	rs56155020	G	T	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	235392044	235392045	chr1:235392045:G:C	rs11584501	G	C	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	235408027	235408028	chr1:235408028:C:T	rs903348	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr1	235475357	235475358	chr1:235475358:C:T	rs834146	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr1	235634564	235634565	chr1:235634565:A:G	rs7554548	A	G	A	Hoxc9_MA0485.1	3	1	-	10.527701808155921	11.415954581178546	AGCTATAAATCTG
chr1	235880419	235880420	chr1:235880420:T:C	rs12751360	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr1	235920297	235920298	chr1:235920298:C:A	rs113120710	C	A	A	Hoxc9_MA0485.1	1	1	-	7.1464842158847	5.0637238953081605	CGCTGTGAATCAC
chr1	235920305	235920306	chr1:235920306:T:C	rs78286346	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	235924023	235924024	chr1:235924024:C:T	rs1885253	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	235989293	235989294	chr1:235989294:C:T	rs116696005	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr1	236044534	236044535	chr1:236044535:C:T	rs6660647	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	236075189	236075190	chr1:236075190:A:G	rs7521008	A	G	.	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	236159683	236159684	chr1:236159684:C:T	rs12072586	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr1	236366801	236366802	chr1:236366802:C:T	rs589563	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	236481048	236481049	chr1:236481049:C:G	rs6699044	C	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr1	236522752	236522753	chr1:236522753:G:A	rs10925158	G	A	A	Hoxc9_MA0485.1	1	1	+	9.206620981632392	7.647177407722334	AGCTATAAATCCA
chr1	236524670	236524671	chr1:236524671:C:T	rs552960731	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr1	236524671	236524672	chr1:236524672:T:A	rs759781090	T	A	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	236524701	236524702	chr1:236524702:A:G	rs1296828464	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	236531828	236531829	chr1:236531829:A:G	rs151174007	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	236531856	236531857	chr1:236531857:T:C	rs73113014	T	C	T	Hoxc9_MA0485.1	4	1	-	11.247958308073306	10.080194594081725	CGCAATAAATCAT
chr1	236543479	236543480	chr1:236543480:C:T	rs2243527	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr1	236987675	236987676	chr1:236987676:G:A	rs1590100	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	237308749	237308750	chr1:237308750:T:C	rs12753804	T	C	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	237857684	237857685	chr1:237857685:T:G	rs2819754	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	237943091	237943092	chr1:237943092:C:G	rs16832101	C	G	g	Hoxc9_MA0485.1	1	1	+	9.477303263523	10.616263744854674	GCAAATAAATCAT
chr1	238089076	238089077	chr1:238089077:C:T	rs12076048	C	T	c	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	238129096	238129097	chr1:238129097:G:A	rs7518258	G	A	G	Hoxc9_MA0485.1	0	1	-	8.366866523803898	8.599210181323265	CACAATAAATCTG
chr1	238174158	238174159	chr1:238174159:G:C	rs12086345	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr1	238252422	238252423	chr1:238252423:C:G	rs1422545095	C	G	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr1	238252433	238252434	chr1:238252434:C:T	rs61829579	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr1	238252450	238252451	chr1:238252451:C:G	rs1383640	C	G	G	Hoxc9_MA0485.1	4	1	-	7.560360358202877	3.5901973909448017	AGCAGTTAATCAC
chr1	238399690	238399691	chr1:238399691:C:T	rs140455713	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	238688294	238688295	chr1:238688295:G:A	rs10802712	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr1	238849874	238849875	chr1:238849875:T:C	rs2689138	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	238998736	238998737	chr1:238998737:C:T	rs9428812	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	239302835	239302836	chr1:239302836:C:T	rs17644359	C	T	C	Hoxc9_MA0485.1	1	1	-	8.446978442153442	6.887534868243382	AGTTGTAAATCTT
chr1	239780226	239780227	chr1:239780227:G:A	rs1578176	G	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr1	239946680	239946681	chr1:239946681:A:T	rs72760788	A	T	a	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	240151101	240151102	chr1:240151102:C:T	rs5000638	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr1	240344111	240344112	chr1:240344112:C:T	rs4460624	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr1	240706317	240706318	chr1:240706318:C:T	rs77934106	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	240712526	240712527	chr1:240712527:G:T	rs61833746	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr1	240712977	240712978	chr1:240712978:A:G	rs10495474	A	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	241028847	241028848	chr1:241028848:T:C	rs7524479	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr1	241213211	241213212	chr1:241213212:T:C	rs2686226	T	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	241213221	241213222	chr1:241213222:A:T	rs72760508	A	T	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	241229493	241229494	chr1:241229494:G:A	rs144657419	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr1	241358173	241358174	chr1:241358174:C:T	rs115418108	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr1	241447234	241447235	chr1:241447235:C:T	rs2994972	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	241988859	241988860	chr1:241988860:A:G	rs28650852	A	G	G	Hoxc9_MA0485.1	8	1	+	7.261509837071716	0.3595513269367569	AGGCATGAATCAC
chr1	242033664	242033665	chr1:242033665:G:A	rs28649433	G	A	A	Hoxc9_MA0485.1	12	1	-	8.483774884789105	8.229777931024552	TTCAGTAAATCAC
chr1	242129491	242129492	chr1:242129492:C:T	rs1898153	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr1	242201322	242201323	chr1:242201323:A:G	rs112070498	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr1	242240383	242240384	chr1:242240384:A:G	rs150153579	A	G	A	Hoxc9_MA0485.1	5	1	-	9.76735682623046	5.282045463591975	TACTATAAATCAT
chr1	242242601	242242602	chr1:242242602:C:T	rs454731	C	T	T	Hoxc9_MA0485.1	12	1	+	8.323914798433258	8.069917844668705	ACCCATTAATCAC
chr1	242473963	242473964	chr1:242473964:T:G	rs10926749	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr1	242547391	242547392	chr1:242547392:T:G	rs1039527	T	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr1	242547513	242547514	chr1:242547514:T:C	rs7551410	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr1	242675128	242675129	chr1:242675129:A:G	rs114136845	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr1	242675147	242675148	chr1:242675148:A:G	rs4658493	A	G	G	Hoxc9_MA0485.1	5	1	-	7.887230115641031	3.4019187530025445	AGCCATTAATCTG
chr1	242692479	242692480	chr1:242692480:T:C	rs12127991	T	C	T	Hoxc9_MA0485.1	1	1	+	9.595317011472867	10.539116850717733	GTCAATAAATCTT
chr1	242739312	242739313	chr1:242739313:A:G	rs6429371	A	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr1	242836633	242836634	chr1:242836634:C:T	rs12091799	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	243351656	243351657	chr1:243351657:A:G	rs77240535	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	243596711	243596712	chr1:243596712:T:C	rs10159392	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	243792817	243792818	chr1:243792818:A:T	rs10927075	A	T	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr1	244035597	244035598	chr1:244035598:C:T	rs116200810	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	244272375	244272376	chr1:244272376:C:T	rs640239	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr1	244319697	244319698	chr1:244319698:T:A	rs3102465	T	A	T	Hoxc9_MA0485.1	11	1	-	9.654957863904631	8.797368478695608	GACTGTAAATCAT
chr1	244366100	244366101	chr1:244366101:A:G	rs4658635	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	244839727	244839728	chr1:244839728:T:G	rs10927333	T	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr1	245099802	245099803	chr1:245099803:A:T	rs4658697	A	T	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr1	245263058	245263059	chr1:245263059:T:G	rs1049496149	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr1	245391481	245391482	chr1:245391482:T:A	rs7525759	T	A	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr1	245409813	245409814	chr1:245409814:G:A	rs112322831	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	245437583	245437584	chr1:245437584:A:G	rs138665794	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr1	245567263	245567264	chr1:245567264:C:T	rs116182432	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	245675339	245675340	chr1:245675340:A:G	rs10754469	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr1	245689085	245689086	chr1:245689086:C:T	rs3766648	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr1	246142595	246142596	chr1:246142596:A:G	rs73141339	A	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr1	246147254	246147255	chr1:246147255:G:A	rs6426281	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr1	246147282	246147283	chr1:246147283:T:C	rs6426282	T	C	C	Hoxc9_MA0485.1	0	1	-	8.715258818649007	9.24807395194001	AGCAATAAATATC
chr1	246156179	246156180	chr1:246156180:A:G	rs4654092	A	G	A	Hoxc9_MA0485.1	8	1	+	8.20899890396518	1.3070403938302206	GCCTATGAATCAT
chr1	246177864	246177865	chr1:246177865:C:T	rs12125969	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr1	246219467	246219468	chr1:246219468:A:G	rs6426285	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr1	246329758	246329759	chr1:246329759:C:T	rs7514346	C	T	T	Hoxc9_MA0485.1	1	1	-	9.354812335788454	7.795368761878394	GGTAATAAATTAT
chr1	246329771	246329772	chr1:246329772:A:G	rs7518705	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr1	246622145	246622146	chr1:246622146:C:A	rs3124077	C	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr1	246837795	246837796	chr1:246837796:C:G	rs545061873	C	G	C	Hoxc9_MA0485.1	3	1	+	7.149045471924139	1.6326489999384466	GGACGTGAATCAT
chr1	247007959	247007960	chr1:247007960:G:A	chr1:247007960:G:A	G	A	g	Hoxc9_MA0485.1	22	0	+	0	0	.
chr1	247360448	247360449	chr1:247360449:C:G	rs6660678	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr1	247547564	247547565	chr1:247547565:G:A	rs1105489	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr1	247872956	247872957	chr1:247872957:C:T	rs112685423	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr1	247896976	247896977	chr1:247896977:C:T	rs10888270	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr1	248446110	248446111	chr1:248446111:G:A	rs951891	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr1	248892875	248892876	chr1:248892876:C:G	rs77971603	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr1	248927033	248927034	chr1:248927034:C:T	chr1:248927034:C:T	C	T	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr10	106109	106110	chr10:106110:C:G	rs9286071	C	G	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	423539	423540	chr10:423540:C:T	rs61837188	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	454951	454952	chr10:454952:T:C	rs35476671	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	482614	482615	chr10:482615:A:G	rs75564266	A	G	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	488753	488754	chr10:488754:G:A	rs139350494	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	514843	514844	chr10:514844:T:G	rs78608396	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	683794	683795	chr10:683795:C:T	rs79919851	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr10	683821	683822	chr10:683822:A:C	rs1890677	A	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	843922	843923	chr10:843923:T:G	rs55934920	T	G	T	Hoxc9_MA0485.1	12	1	+	8.252291428899412	7.788232603749086	AGCCACAAATCAT
chr10	1181656	1181657	chr10:1181657:A:G	rs10794729	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	1353959	1353960	chr10:1353960:C:T	rs2892333	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	1362885	1362886	chr10:1362886:C:T	rs78666830	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	1413499	1413500	chr10:1413500:A:C	rs112696988	A	C	a	Hoxc9_MA0485.1	7	1	+	9.105770648708884	2.201541579503304	TACCATAAATTAC
chr10	1414581	1414582	chr10:1414582:C:T	rs192621282	C	T	t	Hoxc9_MA0485.1	12	1	+	10.93558325828824	10.681586304523687	AGCTGTAAATCAC
chr10	1474796	1474797	chr10:1474797:C:A	rs192661629	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	1476486	1476487	chr10:1476487:C:T	rs7906088	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	1585291	1585292	chr10:1585292:T:C	rs2813391	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	1585301	1585302	chr10:1585302:G:A	rs2676196	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	1627216	1627217	chr10:1627217:G:A	rs1875008	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	1650237	1650238	chr10:1650238:G:T	rs4880899	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	1938528	1938529	chr10:1938529:T:C	rs78230563	T	C	c	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	1938533	1938534	chr10:1938534:T:C	rs72770677	T	C	c	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	1938563	1938564	chr10:1938564:A:G	rs12264805	A	G	g	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	2249437	2249438	chr10:2249438:T:G	rs2065527	T	G	t	Hoxc9_MA0485.1	11	1	-	11.468398391579242	9.415408536680161	GGCTGTAAATCAC
chr10	2445620	2445621	chr10:2445621:T:C	rs145955403	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	2508954	2508955	chr10:2508955:G:C	rs2452187	G	C	C	Hoxc9_MA0485.1	1	1	+	11.04728945917156	9.908328977839886	TGCCGTAAATCAT
chr10	2585227	2585228	chr10:2585228:C:T	rs72771199	C	T	c	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	2744874	2744875	chr10:2744875:G:T	rs7898512	G	T	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	2893264	2893265	chr10:2893265:A:T	rs76440556	A	T	A	Hoxc9_MA0485.1	9	1	-	7.119740382322369	3.292097813822342	CTCCATGAATCAC
chr10	2898021	2898022	chr10:2898022:C:T	rs6601991	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	2898056	2898057	chr10:2898057:T:A	rs55804005	T	A	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	2905557	2905558	chr10:2905558:G:T	rs940623769	G	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	2923995	2923996	chr10:2923996:A:G	rs1909682	A	G	G	Hoxc9_MA0485.1	7	1	+	7.933465810408145	1.0292367412025665	ACCTATCAATCTC
chr10	2929705	2929706	chr10:2929706:C:A	rs2936895	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	3045574	3045575	chr10:3045575:T:A	rs115515701	T	A	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr10	3045603	3045604	chr10:3045604:C:T	rs7083428	C	T	C	Hoxc9_MA0485.1	12	1	+	8.397950404882966	8.143953451118414	AACCATGAATCAC
chr10	3045604	3045605	chr10:3045605:G:A	rs528423059	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	3099774	3099775	chr10:3099775:G:A	rs569153816	G	A	g	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	3099777	3099778	chr10:3099778:C:G	rs11251716	C	G	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	3248865	3248866	chr10:3248866:T:C	rs2764987	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	3258387	3258388	chr10:3258388:G:C	rs12049688	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	3292868	3292869	chr10:3292869:T:C	rs12766986	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	3418685	3418686	chr10:3418686:T:G	chr10:3418686:T:G	T	G	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr10	3459165	3459166	chr10:3459166:C:T	rs11251903	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	3482561	3482562	chr10:3482562:G:A	rs7923379	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	3750651	3750652	chr10:3750652:G:C	rs2129440	G	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	3845496	3845497	chr10:3845497:G:A	rs10904104	G	A	G	Hoxc9_MA0485.1	0	1	-	8.125883756435943	8.35822741395531	CGCCATAAATTCT
chr10	3968916	3968917	chr10:3968917:T:C	rs114734660	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	3980257	3980258	chr10:3980258:C:T	rs4880653	C	T	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	4073808	4073809	chr10:4073809:C:A	rs12268483	C	A	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	4073830	4073831	chr10:4073831:T:C	rs140153734	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	4199379	4199380	chr10:4199380:A:G	rs11252395	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	4260670	4260671	chr10:4260671:T:C	rs12414707	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	4264818	4264819	chr10:4264819:C:T	rs1923394	C	T	c	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	4372253	4372254	chr10:4372254:G:A	rs74832135	G	A	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	4419887	4419888	chr10:4419888:C:A	rs1751286	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	4544109	4544110	chr10:4544110:G:A	rs313476	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	4669570	4669571	chr10:4669571:A:G	rs115663192	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	4677696	4677697	chr10:4677697:G:A	rs74111639	G	A	G	Hoxc9_MA0485.1	12	1	+	8.611829094370341	8.48614873753687	GTTAATAAATCAG
chr10	5075079	5075080	chr10:5075080:G:T	rs7922762	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	5346185	5346186	chr10:5346186:T:G	rs7475825	T	G	G	Hoxc9_MA0485.1	11	1	+	7.438766677157769	3.8838226634984228	GACCTTAAATCTC
chr10	5446990	5446991	chr10:5446991:T:C	chr10:5446991:T:C	T	C	T	Hoxc9_MA0485.1	6	1	-	9.622315289109673	6.588109522600251	GCACATAAATCAA
chr10	5563749	5563750	chr10:5563750:C:G	rs4880733	C	G	G	Hoxc9_MA0485.1	0	1	+	8.863138125706408	10.15084653489153	CCTCATAAATCTC
chr10	5563770	5563771	chr10:5563771:C:T	rs74416291	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	5583050	5583051	chr10:5583051:A:T	rs7909015	A	T	T	Hoxc9_MA0485.1	7	1	+	8.083682289890884	2.8878310809743084	ACCAATGAATCAC
chr10	5583057	5583058	chr10:5583058:G:C	rs7923141	G	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	5632562	5632563	chr10:5632563:G:A	rs117143307	G	A	N	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	5639175	5639176	chr10:5639176:G:A	rs12573500	G	A	a	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	5815515	5815516	chr10:5815516:G:T	rs61016063	G	T	C	Hoxc9_MA0485.1	6	1	-	8.122384308250155	10.295715603581138	AGGCATCAATCAC
chr10	5841201	5841202	chr10:5841202:A:G	rs2137422	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	5841228	5841229	chr10:5841229:G:C	rs1106039	G	C	c	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	6163955	6163956	chr10:6163956:C:T	rs1015392302	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	6163958	6163959	chr10:6163959:A:T	rs592866	A	T	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	6244622	6244623	chr10:6244623:T:A	rs7916509	T	A	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	6292842	6292843	chr10:6292843:C:A	rs57027903	C	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	6299356	6299357	chr10:6299357:T:G	chr10:6299357:T:G	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	6299573	6299574	chr10:6299574:G:A	rs17153320	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	6309997	6309998	chr10:6309998:G:T	rs17153511	G	T	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	6471403	6471404	chr10:6471404:T:C	rs114325965	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr10	6681060	6681061	chr10:6681061:G:A	rs7895632	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	6850278	6850279	chr10:6850279:C:G	rs11254803	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr10	6882155	6882156	chr10:6882156:C:T	rs17401968	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	6912545	6912546	chr10:6912546:G:C	rs952725002	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	6912584	6912585	chr10:6912585:T:C	rs9423991	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	6912585	6912586	chr10:6912586:C:T	rs866715419	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	6955250	6955251	chr10:6955251:G:A	rs870871	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	7136160	7136161	chr10:7136161:C:T	rs181829098	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	7183588	7183589	chr10:7183589:C:T	rs2762612	C	T	C	Hoxc9_MA0485.1	2	1	+	8.612224367719863	7.235205890558639	TGCCATAAATTCC
chr10	7311480	7311481	chr10:7311481:C:A	rs10905151	C	A	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	7350873	7350874	chr10:7350874:T:G	rs10795542	T	G	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	7432966	7432967	chr10:7432967:T:C	rs2253682	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	7606822	7606823	chr10:7606823:C:G	rs2050348	C	G	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	7654677	7654678	chr10:7654678:A:G	rs7091139	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	7984645	7984646	chr10:7984646:C:T	rs7894336	C	T	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	8159821	8159822	chr10:8159822:C:T	rs7098651	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	8499542	8499543	chr10:8499543:G:C	rs4994719	G	C	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	8534197	8534198	chr10:8534198:C:T	rs17143959	C	T	C	Hoxc9_MA0485.1	1	1	+	8.360730575655307	7.416930736410442	TCTAATAAATCTC
chr10	8703456	8703457	chr10:8703457:T:C	rs1970170	T	C	T	Hoxc9_MA0485.1	3	1	-	7.982037373932928	3.200392109517707	TGCAATGAATCAG
chr10	8731803	8731804	chr10:8731804:T:C	rs115120659	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	8985839	8985840	chr10:8985840:A:T	rs10905497	A	T	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	9018493	9018494	chr10:9018494:C:A	rs768991	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	9057337	9057338	chr10:9057338:A:G	rs2797287	A	G	G	Hoxc9_MA0485.1	1	1	+	8.830925348954224	10.390368922864283	CACAATAAATCTT
chr10	9065171	9065172	chr10:9065172:G:A	rs17145169	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	9245157	9245158	chr10:9245158:G:A	rs75383719	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	9579282	9579283	chr10:9579283:C:G	rs11256264	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	9609280	9609281	chr10:9609281:A:G	rs11592618	A	G	G	Hoxc9_MA0485.1	3	1	-	8.546591587395653	9.434844360418277	TGCTATGAATCAC
chr10	9621442	9621443	chr10:9621443:A:G	rs4747833	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr10	9710081	9710082	chr10:9710082:T:C	rs34499326	T	C	T	Hoxc9_MA0485.1	4	1	-	10.064636080855689	8.896872366864104	GTTCATAAATCAC
chr10	9926932	9926933	chr10:9926933:A:G	rs55662684	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	10130908	10130909	chr10:10130909:A:G	rs73566388	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	10138946	10138947	chr10:10138947:C:T	rs72781408	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	10365065	10365066	chr10:10365066:G:A	rs928520	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	10365931	10365932	chr10:10365932:C:T	rs76230550	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	10680649	10680650	chr10:10680650:C:T	rs1359889	C	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	10680694	10680695	chr10:10680695:C:T	rs1359888	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	10826454	10826455	chr10:10826455:A:G	rs6602455	A	G	A	Hoxc9_MA0485.1	8	1	+	9.318851250093477	2.4168927399585187	AGCAATAAATAAT
chr10	10831431	10831432	chr10:10831432:C:G	rs953962660	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	10871010	10871011	chr10:10871011:T:G	rs7068620	T	G	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr10	10916026	10916027	chr10:10916027:C:T	rs6602466	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	11024849	11024850	chr10:11024850:T:A	rs7073548	T	A	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	11048953	11048954	chr10:11048954:G:A	rs976936	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	11091587	11091588	chr10:11091588:C:T	rs189898634	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	11091615	11091616	chr10:11091616:A:G	rs76945157	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr10	11277280	11277281	chr10:11277281:A:G	rs17150017	A	G	A	Hoxc9_MA0485.1	8	1	+	8.720073667472812	1.8181151573378544	TGCCATCAATCTG
chr10	11279636	11279637	chr10:11279637:A:G	rs7076080	A	G	a	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	11306048	11306049	chr10:11306049:C:T	rs114634342	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	11415166	11415167	chr10:11415167:A:G	rs2440111	A	G	G	Hoxc9_MA0485.1	12	1	-	7.755469574457704	8.009466528222255	GACAGTAAATCCT
chr10	11442389	11442390	chr10:11442390:G:A	rs2499910	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	11475054	11475055	chr10:11475055:T:C	rs11257115	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	11535318	11535319	chr10:11535319:C:A	rs12219987	C	A	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr10	11685785	11685786	chr10:11685786:C:T	rs1466696	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	11719526	11719527	chr10:11719527:T:G	rs77721181	T	G	T	Hoxc9_MA0485.1	7	1	-	7.928033532807194	1.0238044636016168	TCCCATAAATAAG
chr10	11725741	11725742	chr10:11725742:G:A	rs117840128	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	11770163	11770164	chr10:11770164:T:C	rs7086494	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	11773803	11773804	chr10:11773804:C:A	rs7080682	C	A	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	11773845	11773846	chr10:11773846:G:A	rs12245566	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	11782850	11782851	chr10:11782851:C:A	rs7098491	C	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	11783616	11783617	chr10:11783617:A:G	rs10508431	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	11825463	11825464	chr10:11825464:A:G	rs61846304	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr10	11831885	11831886	chr10:11831886:G:C	rs146778670	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr10	11913338	11913339	chr10:11913339:A:G	rs80157155	A	G	A	Hoxc9_MA0485.1	11	1	+	7.24752771601212	2.8349943171437504	GCCCCTAAATCAC
chr10	11913345	11913346	chr10:11913346:G:A	rs72775983	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	12180556	12180557	chr10:12180557:C:A	chr10:12180557:C:A	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	12180556	12180557	chr10:12180557:C:T	rs3780865	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	12341617	12341618	chr10:12341618:C:G	rs3935934	C	G	C	Hoxc9_MA0485.1	0	1	-	8.277312292958035	6.989603883772914	GGCATTAAATCAA
chr10	12388976	12388977	chr10:12388977:C:T	rs61847398	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	12414880	12414881	chr10:12414881:T:G	rs74328894	T	G	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	12513511	12513512	chr10:12513512:C:A	rs1077273	C	A	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	12513511	12513512	chr10:12513512:C:T	chr10:12513512:C:T	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	12526430	12526431	chr10:12526431:T:A	rs2815645	T	A	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	12634288	12634289	chr10:12634289:T:C	rs72771758	T	C	T	Hoxc9_MA0485.1	4	1	-	7.328789013996764	6.161025300005179	CCCAATGAATCAC
chr10	12783596	12783597	chr10:12783597:C:T	rs12248437	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	12825392	12825393	chr10:12825393:G:T	rs114427147	G	T	T	Hoxc9_MA0485.1	0	1	+	8.611829094370341	7.5564643427045874	GTTAATAAATCAG
chr10	13046914	13046915	chr10:13046915:T:G	rs72777491	T	G	T	Hoxc9_MA0485.1	7	1	-	9.76824372159718	2.864014652391603	AGTAATAAATCTT
chr10	13280644	13280645	chr10:13280645:C:A	rs11258305	C	A	c	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	13505404	13505405	chr10:13505405:C:T	rs61833902	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	13617163	13617164	chr10:13617164:G:A	rs76256462	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	13681310	13681311	chr10:13681311:G:A	rs17615605	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	13686337	13686338	chr10:13686338:C:T	rs729292	C	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	13729875	13729876	chr10:13729876:A:G	rs72769534	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	13746218	13746219	chr10:13746219:T:C	rs4750404	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	13750991	13750992	chr10:13750992:T:C	rs3949883	T	C	T	Hoxc9_MA0485.1	8	1	-	10.274151920651956	3.3721934105169975	ACCAATAAATCAA
chr10	13860659	13860660	chr10:13860660:C:G	rs61833457	C	G	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	13943936	13943937	chr10:13943937:G:A	rs74122403	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	13987894	13987895	chr10:13987895:C:T	rs7918501	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	14072183	14072184	chr10:14072184:A:G	rs1000962	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	14081044	14081045	chr10:14081045:G:T	rs735439	G	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	14145847	14145848	chr10:14145848:T:C	rs6602709	T	C	C	Hoxc9_MA0485.1	3	1	+	8.691406033966466	9.57965880698909	GGATGTAAATCTC
chr10	14296087	14296088	chr10:14296088:C:G	rs1218464	C	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr10	14296726	14296727	chr10:14296727:G:C	rs913816	G	C	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	14296935	14296936	chr10:14296936:C:A	rs881440	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	14458102	14458103	chr10:14458103:G:A	rs7910798	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	14468405	14468406	chr10:14468406:G:A	rs73597397	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	14554647	14554648	chr10:14554648:G:A	rs116051448	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	14562783	14562784	chr10:14562784:C:T	rs80309617	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	14562785	14562786	chr10:14562786:C:T	rs78008522	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	14589701	14589702	chr10:14589702:G:A	rs564586684	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	14605463	14605464	chr10:14605464:T:C	rs75133650	T	C	T	Hoxc9_MA0485.1	8	1	-	7.695689875287827	0.7937313651528685	CCCCATAAATAAG
chr10	14706070	14706071	chr10:14706071:T:C	rs12782386	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	14706073	14706074	chr10:14706074:T:G	rs12782389	T	G	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	15123821	15123822	chr10:15123822:G:A	rs542099638	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	15170318	15170319	chr10:15170319:G:A	rs148420303	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	15294817	15294818	chr10:15294818:A:C	rs45486796	A	C	A	Hoxc9_MA0485.1	9	1	-	8.271605052174266	1.3833792378006335	GCCTGTAAATTAT
chr10	15431480	15431481	chr10:15431481:C:T	rs11598396	C	T	C	Hoxc9_MA0485.1	12	1	+	10.90883942472591	10.654842470961357	ATCCATAAATCAC
chr10	15769122	15769123	chr10:15769123:T:G	rs143123247	T	G	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	16314497	16314498	chr10:16314498:C:T	rs7070469	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	16481375	16481376	chr10:16481376:A:G	rs902073	A	G	G	Hoxc9_MA0485.1	11	1	+	7.806208778210078	3.39367537934171	GGCCATGAATAAC
chr10	16892144	16892145	chr10:16892145:T:C	chr10:16892145:T:C	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	16950132	16950133	chr10:16950133:T:G	rs74668791	T	G	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	16988854	16988855	chr10:16988855:T:C	rs2942366	T	C	T	Hoxc9_MA0485.1	9	1	+	7.745143592750686	0.8569177783770534	GCCCATTAATCTT
chr10	17010042	17010043	chr10:17010043:C:T	rs10904863	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	17125422	17125423	chr10:17125423:G:A	rs7916688	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	17201289	17201290	chr10:17201290:T:C	rs143754388	T	C	T	Hoxc9_MA0485.1	12	1	-	10.778163821283048	10.903844178116518	GGCAGTAAATCAA
chr10	17201321	17201322	chr10:17201322:A:G	rs184751682	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	17202307	17202308	chr10:17202308:G:T	rs17466418	G	T	G	Hoxc9_MA0485.1	2	1	-	8.914641976332272	6.995239003928519	ACCCATAAATAAT
chr10	17217863	17217864	chr10:17217864:T:C	rs7920112	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	17233450	17233451	chr10:17233451:C:T	rs45437393	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	17406345	17406346	chr10:17406346:T:G	rs77982192	T	G	T	Hoxc9_MA0485.1	5	1	+	7.950608577163369	1.052065601443776	TCCCATAAATTTG
chr10	17476160	17476161	chr10:17476161:C:T	rs7069819	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	17505281	17505282	chr10:17505282:C:G	rs11254632	C	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	17544609	17544610	chr10:17544610:T:C	rs12255594	T	C	T	Hoxc9_MA0485.1	6	1	-	11.580797353905073	8.546591587395653	TGCTATAAATCAC
chr10	17562420	17562421	chr10:17562421:A:G	rs2154258	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	17585098	17585099	chr10:17585099:C:T	rs12770060	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	17647611	17647612	chr10:17647612:T:C	rs78405687	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	17653184	17653185	chr10:17653185:A:G	rs77537869	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	17769288	17769289	chr10:17769289:T:C	chr10:17769289:T:C	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	17801718	17801719	chr10:17801719:A:G	rs34869787	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr10	17833816	17833817	chr10:17833817:T:A	rs2477664	T	A	A	Hoxc9_MA0485.1	7	1	-	7.116640768382109	1.9207895594655344	GCTCATGAATCTC
chr10	17924366	17924367	chr10:17924367:G:A	rs375477285	G	A	g	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	17954933	17954934	chr10:17954934:C:A	rs692635	C	A	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	17984168	17984169	chr10:17984169:T:C	rs2437264	T	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	17984189	17984190	chr10:17984190:A:G	rs74118073	A	G	A	Hoxc9_MA0485.1	8	1	+	8.044643522142014	1.1426850120070546	TGCAGTAAATTAG
chr10	18005796	18005797	chr10:18005797:C:G	rs2437273	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr10	18096712	18096713	chr10:18096713:T:G	rs11597102	T	G	-	Hoxc9_MA0485.1	3	1	-	8.703378238817223	9.438129446387691	TGCAATCAATCTC
chr10	18096730	18096731	chr10:18096731:A:T	rs951546494	A	T	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	18369122	18369123	chr10:18369123:C:T	rs7072176	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	18369123	18369124	chr10:18369124:T:A	rs59389737	T	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	18918612	18918613	chr10:18918613:G:C	rs1887923	G	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	19480580	19480581	chr10:19480581:A:G	rs10764037	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	19638994	19638995	chr10:19638995:C:T	rs79711488	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	19931460	19931461	chr10:19931461:A:G	rs113161918	A	G	A	Hoxc9_MA0485.1	2	1	+	8.156037984079262	7.379556814761709	GCATGTAAATCAT
chr10	19954006	19954007	chr10:19954007:G:C	rs11011697	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	20015845	20015846	chr10:20015846:C:T	rs11011738	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	20237862	20237863	chr10:20237863:T:C	rs2681939	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	20315447	20315448	chr10:20315448:G:T	rs11011957	G	T	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	20371404	20371405	chr10:20371405:T:G	rs61704976	T	G	T	Hoxc9_MA0485.1	4	1	-	8.842908617095791	3.7049819358461322	AGGAATAAATCAG
chr10	20371426	20371427	chr10:20371427:C:A	rs11012006	C	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	20486501	20486502	chr10:20486502:A:C	rs1856582	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr10	20858488	20858489	chr10:20858489:G:A	rs703093	G	A	G	Hoxc9_MA0485.1	10	1	-	8.994010567664294	7.190174663355543	AGTAGTAAATCAG
chr10	20990961	20990962	chr10:20990962:C:A	chr10:20990962:C:A	C	A	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	21080074	21080075	chr10:21080075:T:A	rs10828184	T	A	A	Hoxc9_MA0485.1	11	1	+	8.933981993306059	9.791571378515082	GAACATAAATCTT
chr10	21089668	21089669	chr10:21089669:T:A	rs1977449	T	A	T	Hoxc9_MA0485.1	8	1	-	8.537058241852616	1.635099731717656	ACCTATCAATCAT
chr10	21285810	21285811	chr10:21285811:C:T	rs7070580	C	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr10	21340469	21340470	chr10:21340470:A:C	rs188947084	A	C	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	21399113	21399114	chr10:21399114:G:A	rs76660990	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	22022375	22022376	chr10:22022376:T:C	rs10740998	T	C	C	Hoxc9_MA0485.1	4	1	-	8.213364958351743	7.04560124436016	CACTATAAATCTG
chr10	22230586	22230587	chr10:22230587:G:T	rs114145454	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr10	22326416	22326417	chr10:22326417:T:C	rs190796224	T	C	t	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	22823843	22823844	chr10:22823844:T:C	rs78784059	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	23006973	23006974	chr10:23006974:T:C	rs11013233	T	C	T	Hoxc9_MA0485.1	9	1	+	8.418054910856759	1.5298290964831274	AACAGTAAATCTT
chr10	23203321	23203322	chr10:23203322:C:T	rs537822412	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	23344506	23344507	chr10:23344507:T:C	chr10:23344507:T:C	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	23572206	23572207	chr10:23572207:G:A	rs10764404	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	23585476	23585477	chr10:23585477:G:A	rs12257107	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	24239047	24239048	chr10:24239048:T:G	chr10:24239048:T:G	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	24266888	24266889	chr10:24266889:T:C	rs6482381	T	C	t	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	24389097	24389098	chr10:24389098:A:G	rs6482391	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	24428631	24428632	chr10:24428632:C:T	rs12766881	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	24502493	24502494	chr10:24502494:G:A	rs1556404	G	A	A	Hoxc9_MA0485.1	4	1	+	8.586680767480537	9.75444448147212	TCCCGTAAATCTG
chr10	24822257	24822258	chr10:24822258:G:T	rs111490693	G	T	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	25403944	25403945	chr10:25403945:T:C	rs1754271	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	25438605	25438606	chr10:25438606:G:A	rs1773656	G	A	G	Hoxc9_MA0485.1	6	1	-	7.902846206689138	6.547453036482605	AGCCATCAATTTT
chr10	25628833	25628834	chr10:25628834:G:A	rs12249396	G	A	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	25766950	25766951	chr10:25766951:C:T	rs138401978	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	25898993	25898994	chr10:25898994:T:C	rs11014841	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	26215757	26215758	chr10:26215758:A:G	rs8190586	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	26379228	26379229	chr10:26379229:G:A	rs11015073	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	26683490	26683491	chr10:26683491:G:T	rs546229972	G	T	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	26683501	26683502	chr10:26683502:C:T	rs1748345	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	26951182	26951183	chr10:26951183:A:G	rs77317118	A	G	A	Hoxc9_MA0485.1	5	1	-	7.918048619087036	3.4327372564485485	GGTTGTCAATCAC
chr10	27434103	27434104	chr10:27434104:C:T	rs7342136	C	T	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	27621042	27621043	chr10:27621043:A:T	rs10829294	A	T	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	27622708	27622709	chr10:27622709:A:G	rs11015913	A	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	27622741	27622742	chr10:27622742:C:A	rs11015914	C	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr10	27957414	27957415	chr10:27957415:C:T	rs7922435	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr10	28254786	28254787	chr10:28254787:C:T	rs11006956	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	28254805	28254806	chr10:28254806:G:T	rs11006957	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	28645479	28645480	chr10:28645480:T:A	rs76632415	T	A	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	28682708	28682709	chr10:28682709:A:G	rs571227675	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	28704547	28704548	chr10:28704548:A:G	rs72631851	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	28818981	28818982	chr10:28818982:C:T	rs534279068	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	28858900	28858901	chr10:28858901:T:G	rs12265370	T	G	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr10	28980451	28980452	chr10:28980452:C:G	rs788048	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	28995805	28995806	chr10:28995806:T:A	rs11007345	T	A	T	Hoxc9_MA0485.1	4	1	-	9.493709429579875	5.825094187263278	AGAAATAAATCAA
chr10	29243221	29243222	chr10:29243222:C:T	rs11007480	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	29344678	29344679	chr10:29344679:G:A	rs79573091	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	29480163	29480164	chr10:29480164:G:C	rs3952847	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	29496261	29496262	chr10:29496262:G:A	rs11007625	G	A	a	Hoxc9_MA0485.1	2	1	-	7.660195464418936	6.283176987257712	CACCATCAATCAA
chr10	29588032	29588033	chr10:29588033:A:T	rs188468466	A	T	A	Hoxc9_MA0485.1	5	1	-	8.20557445381971	1.3070314781001129	TGCAATTAATCAC
chr10	29588035	29588036	chr10:29588036:G:T	rs192311900	G	T	G	Hoxc9_MA0485.1	2	1	-	8.20557445381971	6.286171481415953	TGCAATTAATCAC
chr10	29733621	29733622	chr10:29733622:G:A	rs7913784	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	29746661	29746662	chr10:29746662:C:T	rs71491406	C	T	C	Hoxc9_MA0485.1	10	1	+	7.476107851548403	5.6722719472396514	GGCAGTGAATCTT
chr10	29865597	29865598	chr10:29865598:C:T	rs76854040	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	29973433	29973434	chr10:29973434:C:T	rs2767624	C	T	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	30062083	30062084	chr10:30062084:G:A	rs147651271	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	30062095	30062096	chr10:30062096:T:A	rs73598344	T	A	T	Hoxc9_MA0485.1	9	1	+	9.848479426450766	6.020836857950742	TGCAGTAAATCAG
chr10	30124179	30124180	chr10:30124180:A:G	rs2478838	A	G	A	Hoxc9_MA0485.1	11	1	+	9.096840168038593	4.684306769170225	TGAAATAAATCAG
chr10	30188614	30188615	chr10:30188615:C:T	rs11597383	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	30345614	30345615	chr10:30345615:A:G	rs6481673	A	G	.	Hoxc9_MA0485.1	9	1	-	10.985827766714229	4.097601952340596	GGCAATAAATTAC
chr10	30490181	30490182	chr10:30490182:T:C	rs76524638	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	30541228	30541229	chr10:30541229:G:A	rs3124180	G	A	g	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	30561694	30561695	chr10:30561695:T:C	rs76868982	T	C	T	Hoxc9_MA0485.1	11	1	-	8.94123411275005	4.528700713881682	CCCAGTAAATCAT
chr10	30676155	30676156	chr10:30676156:G:A	rs11008171	G	A	g	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	30791390	30791391	chr10:30791391:C:G	rs74135841	C	G	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	30830784	30830785	chr10:30830785:C:T	rs10826875	C	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	30863021	30863022	chr10:30863022:T:C	rs2934653	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	30902056	30902057	chr10:30902057:C:T	rs148501468	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr10	30997600	30997601	chr10:30997601:G:A	rs55913151	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	31056999	31057000	chr10:31057000:G:A	rs2994681	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr10	31081159	31081160	chr10:31081160:A:G	rs11008340	A	G	a	Hoxc9_MA0485.1	16	0	+	0	0	.
chr10	31156990	31156991	chr10:31156991:A:G	rs793107	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	31156997	31156998	chr10:31156998:T:C	rs1764444	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	31289098	31289099	chr10:31289099:T:C	rs7072449	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	31427574	31427575	chr10:31427575:A:G	rs112700178	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	32180726	32180727	chr10:32180727:T:C	rs2998057	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	32269525	32269526	chr10:32269526:C:A	rs12772050	C	A	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	32953367	32953368	chr10:32953368:G:A	rs140563523	G	A	G	Hoxc9_MA0485.1	3	1	-	7.727070003931925	6.838817230909302	GGACATGAATCAA
chr10	32985499	32985500	chr10:32985500:A:G	rs1187089	A	G	G	Hoxc9_MA0485.1	11	1	-	10.128238381505206	8.932837911815147	GGCAATAAATTTC
chr10	33067083	33067084	chr10:33067084:A:G	rs117133346	A	G	A	Hoxc9_MA0485.1	12	1	-	10.83803469600192	11.092031649766472	TGTCATAAATCAT
chr10	33096632	33096633	chr10:33096633:C:A	rs2755993	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	33096634	33096635	chr10:33096635:G:C	rs2666256	G	C	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	33307117	33307118	chr10:33307118:A:T	rs4934901	A	T	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	33368395	33368396	chr10:33368396:A:G	rs75525052	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	33425885	33425886	chr10:33425886:A:G	rs10827259	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	33658560	33658561	chr10:33658561:G:T	rs7079605	G	T	T	Hoxc9_MA0485.1	0	1	+	9.261927201400683	8.206562449734928	GGCAATAAATAAA
chr10	33709484	33709485	chr10:33709485:A:G	rs4316456	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	33764077	33764078	chr10:33764078:C:G	rs2812605	C	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr10	33858366	33858367	chr10:33858367:T:C	rs10508791	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	34001196	34001197	chr10:34001197:A:G	rs11009617	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr10	34025229	34025230	chr10:34025230:G:C	rs73259096	G	C	g	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	34080088	34080089	chr10:34080089:C:T	rs10827323	C	T	C	Hoxc9_MA0485.1	4	1	-	9.650436105142557	10.81819981913414	AGACGTAAATCAT
chr10	34080108	34080109	chr10:34080109:T:C	rs10827324	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	34150593	34150594	chr10:34150594:G:C	rs11595985	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr10	34181375	34181376	chr10:34181376:T:C	rs1660627	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	34224901	34224902	chr10:34224902:C:T	rs2570326	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	34364397	34364398	chr10:34364398:C:T	rs539874707	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	34547505	34547506	chr10:34547506:G:A	rs76231738	G	A	G	Hoxc9_MA0485.1	12	1	-	9.267347399467614	9.013350445703061	CGTAATAAATCTC
chr10	34582073	34582074	chr10:34582074:C:T	rs542333331	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	34638648	34638649	chr10:34638649:A:G	chr10:34638649:A:G	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	34727646	34727647	chr10:34727647:T:C	rs11009892	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr10	34844687	34844688	chr10:34844688:C:A	rs11009978	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr10	34924581	34924582	chr10:34924582:T:C	rs2504261	T	C	T	Hoxc9_MA0485.1	4	1	-	8.449378057037094	7.281614343045511	AGGAATAAATCTT
chr10	35037860	35037861	chr10:35037861:G:A	rs2384283	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	35089730	35089731	chr10:35089731:A:G	rs79035143	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	35089772	35089773	chr10:35089773:C:T	rs141222936	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	35461304	35461305	chr10:35461305:A:G	rs2504365	A	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	35633975	35633976	chr10:35633976:T:G	rs910967	T	G	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	35686674	35686675	chr10:35686675:T:A	rs73272463	T	A	T	Hoxc9_MA0485.1	8	1	-	8.242660345860306	1.3407018357253493	TGACATAAATCCT
chr10	36021821	36021822	chr10:36021822:G:T	rs10508824	G	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	36257186	36257187	chr10:36257187:C:T	rs1219597	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	36282000	36282001	chr10:36282001:G:C	rs74526647	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	36469976	36469977	chr10:36469977:G:A	rs4934821	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	36555318	36555319	chr10:36555319:G:A	rs193120047	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	36559797	36559798	chr10:36559798:C:T	rs1332768	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	36629666	36629667	chr10:36629667:G:A	rs11010742	G	A	G	Hoxc9_MA0485.1	0	1	+	10.08956354335892	9.55674841006792	GGTCATAAATTAT
chr10	36634976	36634977	chr10:36634977:C:T	rs79274493	C	T	C	Hoxc9_MA0485.1	4	1	-	8.627042691905887	9.79480640589747	ACCCGTAAATTAT
chr10	36802563	36802564	chr10:36802564:A:G	rs1464576101	A	G	a	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	36818326	36818327	chr10:36818327:C:A	rs12572077	C	A	c	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	36818337	36818338	chr10:36818338:G:C	rs2695081	G	C	g	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	37720354	37720355	chr10:37720355:G:A	rs17660553	G	A	.	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr10	37935494	37935495	chr10:37935495:C:T	rs1208566	C	T	-	Hoxc9_MA0485.1	0	1	-	7.395578806801334	6.862763673510331	GGCAGTCAATCCC
chr10	37938115	37938116	chr10:37938116:G:A	rs150499862	G	A	g	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	39045568	39045569	chr10:39045569:T:C	rs1276857442	T	C	.	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	39372407	39372408	chr10:39372408:C:T	rs1225842032	C	T	.	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	39372428	39372429	chr10:39372429:G:A	rs71183119	G	A	.	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	42187877	42187878	chr10:42187878:G:A	rs191890307	G	A	.	Hoxc9_MA0485.1	2	1	-	9.632619726875006	8.255601249713783	GGCCATGAATCTC
chr10	43220975	43220976	chr10:43220976:T:A	rs76285332	T	A	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	43302193	43302194	chr10:43302194:G:C	rs2503868	G	C	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	43595991	43595992	chr10:43595992:G:T	rs11238592	G	T	g	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	43794250	43794251	chr10:43794251:C:T	rs11238709	C	T	.	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	43794253	43794254	chr10:43794254:C:T	rs149205508	C	T	.	Hoxc9_MA0485.1	17	0	-	0	0	.
chr10	43854131	43854132	chr10:43854132:G:A	rs78129090	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	43910378	43910379	chr10:43910379:G:A	rs75864535	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	43946290	43946291	chr10:43946291:T:C	rs141227858	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	43963265	43963266	chr10:43963266:C:T	rs898549	C	T	C	Hoxc9_MA0485.1	4	1	-	8.142446299091857	9.310210013083442	CTCCGTAAATCAA
chr10	44052055	44052056	chr10:44052056:C:T	rs77419579	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	44066473	44066474	chr10:44066474:G:A	rs17155040	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	44105889	44105890	chr10:44105890:C:T	rs12766571	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	44316519	44316520	chr10:44316520:A:C	rs67379075	A	C	C	Hoxc9_MA0485.1	4	1	+	7.650407170129396	2.5124804888797363	AGCCATGAATCCT
chr10	44316539	44316540	chr10:44316540:C:T	rs145918626	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	44386886	44386887	chr10:44386887:C:G	rs2839682	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	44473327	44473328	chr10:44473328:G:A	rs4948893	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	44576441	44576442	chr10:44576442:C:T	rs7083920	C	T	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	44675163	44675164	chr10:44675164:G:A	rs77462963	G	A	G	Hoxc9_MA0485.1	1	1	+	8.242418888598744	6.682975314688684	GGCAGTAAATTTG
chr10	44894654	44894655	chr10:44894655:C:A	rs10900127	C	A	C	Hoxc9_MA0485.1	2	1	+	8.994076998175457	7.074674025771703	GGCAATAAATATT
chr10	44978832	44978833	chr10:44978833:C:T	rs2274887	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	44978844	44978845	chr10:44978845:C:A	rs74469250	C	A	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	45154665	45154666	chr10:45154666:C:A	rs3851259	C	A	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	45179704	45179705	chr10:45179705:T:G	rs11239374	T	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	45515056	45515057	chr10:45515057:T:C	rs35504302	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	45551063	45551064	chr10:45551064:T:C	rs34138033	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	45575322	45575323	chr10:45575323:C:T	rs11239565	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	45674521	45674522	chr10:45674522:C:T	rs79083998	C	T	.	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	46051033	46051034	chr10:46051034:G:A	rs73318166	G	A	g	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	46297621	46297622	chr10:46297622:T:A	rs4539251	T	A	.	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr10	46514985	46514986	chr10:46514986:G:A	rs9733650	G	A	g	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	46526083	46526084	chr10:46526084:A:T	rs111209257	A	T	-	Hoxc9_MA0485.1	4	1	+	7.759904996236036	4.091289753919436	ACACATCAATCAC
chr10	46526085	46526086	chr10:46526086:C:T	rs111200266	C	T	-	Hoxc9_MA0485.1	6	1	+	7.759904996236036	6.404511826029499	ACACATCAATCAC
chr10	47059064	47059065	chr10:47059065:G:C	rs1055407205	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	47080882	47080883	chr10:47080883:C:T	rs786781	C	T	T	Hoxc9_MA0485.1	4	1	-	8.083644727541028	9.251408441532611	CCCAGTAAATCTT
chr10	47175428	47175429	chr10:47175429:C:T	rs117179121	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	47181349	47181350	chr10:47181350:A:G	rs61843411	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	47218938	47218939	chr10:47218939:C:T	rs9421755	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	47287575	47287576	chr10:47287576:C:T	rs11204220	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	47315637	47315638	chr10:47315638:G:A	rs79640695	G	A	G	Hoxc9_MA0485.1	2	1	-	9.137743857361976	7.760725380200751	GGCCTTAAATCAG
chr10	47768238	47768239	chr10:47768239:C:G	rs1433677073	C	G	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	48535217	48535218	chr10:48535218:C:T	rs1814470	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	48912661	48912662	chr10:48912662:T:C	rs6537583	T	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	48913276	48913277	chr10:48913277:G:A	rs2663055	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	48945928	48945929	chr10:48945929:T:G	chr10:48945929:T:G	T	G	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	49011043	49011044	chr10:49011044:C:T	rs2255360	C	T	T	Hoxc9_MA0485.1	4	1	-	8.106939753386	9.274703467377583	TTCCGTAAATCTT
chr10	49077000	49077001	chr10:49077001:C:T	rs61848380	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	49143838	49143839	chr10:49143839:T:C	rs2377982	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	49201053	49201054	chr10:49201054:G:A	rs12570293	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	49277477	49277478	chr10:49277478:T:G	rs7911514	T	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	49426732	49426733	chr10:49426733:C:T	rs61850970	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	49426735	49426736	chr10:49426736:C:G	rs2025446	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	49447132	49447133	chr10:49447133:A:G	rs7080607	A	G	A	Hoxc9_MA0485.1	4	1	+	9.679239337802468	8.511475623810883	ACACATAAATCAT
chr10	49562585	49562586	chr10:49562586:A:G	rs10857507	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	49845394	49845395	chr10:49845395:T:C	rs139298953	T	C	t	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	49884012	49884013	chr10:49884013:T:C	rs7086002	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	50367690	50367691	chr10:50367691:A:G	rs10508927	A	G	A	Hoxc9_MA0485.1	4	1	+	7.891771993646578	6.724008279654995	ATCCATCAATCAA
chr10	50453105	50453106	chr10:50453106:A:G	rs1203381	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	50471369	50471370	chr10:50471370:A:G	rs143855538	A	G	A	Hoxc9_MA0485.1	6	1	+	7.292523522766438	4.258317756257015	CCACGTAAATCAG
chr10	50471389	50471390	chr10:50471390:A:G	rs146878051	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	50549942	50549943	chr10:50549943:C:T	rs3011790	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	50552950	50552951	chr10:50552951:C:A	rs777142802	C	A	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	50556711	50556712	chr10:50556712:C:T	rs3011793	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	50645265	50645266	chr10:50645266:A:G	rs4503481	A	G	A	Hoxc9_MA0485.1	8	1	+	7.943688554072071	1.0417300439371124	GGCCATAAATACA
chr10	50794582	50794583	chr10:50794583:A:G	rs76820804	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	51011057	51011058	chr10:51011058:A:G	rs76806799	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	51046824	51046825	chr10:51046825:T:C	rs9633564	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	51118190	51118191	chr10:51118191:A:G	rs7897669	A	G	a	Hoxc9_MA0485.1	0	1	-	8.641407558427671	8.409063900908302	TGCCATAAAACAC
chr10	51397875	51397876	chr10:51397876:C:G	rs190629823	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	51640271	51640272	chr10:51640272:A:G	rs75295207	A	G	A	Hoxc9_MA0485.1	6	1	+	9.791571378515082	6.757365612005661	GAACATAAATCAT
chr10	51685392	51685393	chr10:51685393:C:T	rs7913405	C	T	C	Hoxc9_MA0485.1	1	1	-	9.463396067558277	7.903952493648215	GGTCATAAATAAC
chr10	51686001	51686002	chr10:51686002:A:G	rs10998900	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	51905231	51905232	chr10:51905232:C:A	rs1937672	C	A	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr10	52030700	52030701	chr10:52030701:C:T	rs10762541	C	T	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr10	52574941	52574942	chr10:52574942:C:G	rs117446437	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	52618880	52618881	chr10:52618881:C:T	rs10508973	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr10	52618917	52618918	chr10:52618918:G:A	rs10508974	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	52631253	52631254	chr10:52631254:C:T	rs11002822	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	52744591	52744592	chr10:52744592:G:A	rs4935342	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	52990849	52990850	chr10:52990850:T:C	rs2244637	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	53030186	53030187	chr10:53030187:C:T	rs2264661	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	53091164	53091165	chr10:53091165:C:T	rs79301467	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	53397101	53397102	chr10:53397102:G:T	rs2173520	G	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	53491737	53491738	chr10:53491738:T:C	rs452199	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	53608427	53608428	chr10:53608428:G:A	rs78728548	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	53687891	53687892	chr10:53687892:T:C	rs16913771	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	53839787	53839788	chr10:53839788:T:A	rs7914433	T	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	53899889	53899890	chr10:53899890:C:G	rs77371413	C	G	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	53992023	53992024	chr10:53992024:A:C	rs12761393	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	54713098	54713099	chr10:54713099:T:A	rs17592418	T	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	55063680	55063681	chr10:55063681:C:T	rs10740611	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr10	55198987	55198988	chr10:55198988:A:C	rs2384630	A	C	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	55764627	55764628	chr10:55764628:G:A	rs2140400	G	A	a	Hoxc9_MA0485.1	28	0	-	0	0	.
chr10	55960636	55960637	chr10:55960637:A:T	rs10763277	A	T	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr10	56035715	56035716	chr10:56035716:A:C	rs1587516	A	C	A	Hoxc9_MA0485.1	9	1	-	8.971159811205123	2.082933996831491	TGAAATAAATCAA
chr10	56035738	56035739	chr10:56035739:A:C	rs1587515	A	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	56296763	56296764	chr10:56296764:A:G	rs16908640	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	56744732	56744733	chr10:56744733:A:G	rs10219056	A	G	a	Hoxc9_MA0485.1	11	1	-	8.830925348954224	7.6355248792641675	CACAATAAATCTT
chr10	56754879	56754880	chr10:56754880:G:C	rs11005501	G	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	56771474	56771475	chr10:56771475:T:G	rs7909754	T	G	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	57260390	57260391	chr10:57260391:T:G	rs1679493	T	G	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	57322296	57322297	chr10:57322297:A:G	rs12415435	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	57336577	57336578	chr10:57336578:G:C	rs182723053	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr10	57336616	57336617	chr10:57336617:A:G	rs2928467	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	57476042	57476043	chr10:57476043:A:G	rs79744788	A	G	A	Hoxc9_MA0485.1	12	1	-	8.619430037424962	8.873426991189515	CACCATAAATTAT
chr10	57602640	57602641	chr10:57602641:G:A	rs7100285	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	57645424	57645425	chr10:57645425:T:C	rs149365870	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	57694605	57694606	chr10:57694606:T:A	rs4558094	T	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	57959993	57959994	chr10:57959994:G:A	rs77840558	G	A	G	Hoxc9_MA0485.1	0	1	-	8.39579005510058	8.628133712619949	CGTTATAAATCTG
chr10	58028890	58028891	chr10:58028891:A:G	rs914767	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	58028913	58028914	chr10:58028914:G:C	rs60184203	G	C	C	Hoxc9_MA0485.1	1	1	-	8.964323007099777	10.103283488431451	TCTAATAAATCAT
chr10	58086357	58086358	chr10:58086358:A:G	rs1759339	A	G	G	Hoxc9_MA0485.1	2	1	-	9.990884526105622	11.367903003266845	GGTAGTAAATCAT
chr10	58153108	58153109	chr10:58153109:A:G	rs3862864	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	58526106	58526107	chr10:58526107:A:G	rs1649022	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	58613186	58613187	chr10:58613187:C:T	rs757848774	C	T	C	Hoxc9_MA0485.1	0	1	-	8.28994362499292	7.757128491701917	GGGAATAAATTAC
chr10	58734394	58734395	chr10:58734395:G:A	rs12243547	G	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	58841085	58841086	chr10:58841086:A:C	rs3099153	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	58927531	58927532	chr10:58927532:T:A	rs4948321	T	A	T	Hoxc9_MA0485.1	11	1	-	8.219843844242568	7.362254459033547	GGCAGTAAATAAG
chr10	59265397	59265398	chr10:59265398:G:A	rs73298134	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	59462794	59462795	chr10:59462795:T:C	rs1450771	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	59854524	59854525	chr10:59854525:C:T	rs1709343	C	T	T	Hoxc9_MA0485.1	10	1	+	8.698039548406182	6.8942036440974315	GCTAATAAATCTG
chr10	59979379	59979380	chr10:59979380:T:C	rs10761424	T	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	59979382	59979383	chr10:59979383:A:G	rs10761425	A	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	60087787	60087788	chr10:60087788:G:C	rs10761451	G	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	60141023	60141024	chr10:60141024:C:G	rs16914794	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	60141047	60141048	chr10:60141048:C:T	rs72820432	C	T	C	Hoxc9_MA0485.1	0	1	-	9.280970970809438	8.748155837518437	GACCATAAATAAC
chr10	60296709	60296710	chr10:60296710:T:C	rs9633531	T	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	60424078	60424079	chr10:60424079:A:G	rs950826	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr10	60475414	60475415	chr10:60475415:A:G	rs17810349	A	G	a	Hoxc9_MA0485.1	6	1	+	8.526232314734585	5.492026548225165	GTCCATAAATTTT
chr10	60573906	60573907	chr10:60573907:C:T	rs151007800	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	60778061	60778062	chr10:60778062:A:G	rs141637446	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	60778067	60778068	chr10:60778068:A:G	rs893764670	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	60797366	60797367	chr10:60797367:T:C	rs2456767	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	60797378	60797379	chr10:60797379:G:A	rs16915552	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	60979063	60979064	chr10:60979064:C:T	rs78547823	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	61110106	61110107	chr10:61110107:C:T	rs61853113	C	T	c	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	61301410	61301411	chr10:61301411:C:T	rs3107447	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	61339349	61339350	chr10:61339350:A:C	rs1915428	A	C	A	Hoxc9_MA0485.1	3	1	+	8.679103571390973	9.413854778961442	GCCAGTAAATTAC
chr10	61355356	61355357	chr10:61355357:C:T	rs78695492	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	61636281	61636282	chr10:61636282:T:A	rs10994843	T	A	T	Hoxc9_MA0485.1	11	1	+	9.74032903705954	10.597918422268563	GTCCATAAATCTA
chr10	61662468	61662469	chr10:61662469:A:G	rs144069768	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	61689089	61689090	chr10:61689090:A:T	rs61850472	A	T	A	Hoxc9_MA0485.1	9	1	-	8.953049741882113	5.125407173382089	GTTCATAAATCTT
chr10	61755215	61755216	chr10:61755216:G:A	rs375113741	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	61935239	61935240	chr10:61935240:A:G	rs2393783	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	61935288	61935289	chr10:61935289:C:G	rs6479779	C	G	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	61940135	61940136	chr10:61940136:A:C	rs7073837	A	C	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	61940161	61940162	chr10:61940162:T:C	rs79274707	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	62041962	62041963	chr10:62041963:T:G	rs10821945	T	G	T	Hoxc9_MA0485.1	6	1	-	8.59844305303154	6.425111757700557	ATCAATAAATCTG
chr10	62281448	62281449	chr10:62281449:C:T	rs7478117	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	62472282	62472283	chr10:62472283:T:C	rs1955331	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	62669546	62669547	chr10:62669547:C:T	rs7092853	C	T	T	Hoxc9_MA0485.1	12	1	+	8.570806139680274	8.316809185915721	GGACATGAATCAC
chr10	62669558	62669559	chr10:62669559:G:A	rs11812737	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	62857179	62857180	chr10:62857180:T:C	rs224313	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	63055392	63055393	chr10:63055393:G:A	rs12247165	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr10	63256308	63256309	chr10:63256309:G:T	rs139734876	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	63355903	63355904	chr10:63355904:T:C	rs113262551	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	63562707	63562708	chr10:63562708:A:G	rs72837096	A	G	A	Hoxc9_MA0485.1	8	1	+	9.239781106652647	2.3378225965176878	AGCAATCAATCAA
chr10	63573526	63573527	chr10:63573527:C:T	rs547863751	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	63629647	63629648	chr10:63629648:T:C	rs183602733	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	63799225	63799226	chr10:63799226:A:G	rs10995626	A	G	A	Hoxc9_MA0485.1	9	1	-	8.242660345860306	1.3544345314866766	TGACATAAATCCT
chr10	63866627	63866628	chr10:63866628:A:G	rs534157484	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	64038090	64038091	chr10:64038091:C:T	rs71508986	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	64396563	64396564	chr10:64396564:A:T	rs1462890997	A	T	A	Hoxc9_MA0485.1	9	1	-	9.730830650435015	5.903188081934991	AACCATAAATCTA
chr10	65110245	65110246	chr10:65110246:A:G	rs10996217	A	G	g	Hoxc9_MA0485.1	9	1	+	8.387410604663119	5.3268273587895125	TGCCATAAAACAT
chr10	65276856	65276857	chr10:65276857:C:T	rs971863	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	65811611	65811612	chr10:65811612:A:C	rs10996679	A	C	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	65868478	65868479	chr10:65868479:C:T	rs74968435	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	66142679	66142680	chr10:66142680:A:C	rs10509249	A	C	A	Hoxc9_MA0485.1	0	1	+	11.432156171392387	10.677262895498266	AACCATAAATCAC
chr10	66219100	66219101	chr10:66219101:G:A	rs10822753	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	66305911	66305912	chr10:66305912:T:G	rs10822801	T	G	G	Hoxc9_MA0485.1	1	1	+	8.852076264036917	10.934836584613453	GTCTATAAATCTA
chr10	66539331	66539332	chr10:66539332:T:C	rs113911208	T	C	T	Hoxc9_MA0485.1	11	1	+	7.493905545557232	6.298505075867174	CCCAGTAAATCTA
chr10	66539347	66539348	chr10:66539348:T:A	rs2660009	T	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	66550826	66550827	chr10:66550827:T:C	rs728235	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	66596207	66596208	chr10:66596208:G:A	rs1158119	G	A	G	Hoxc9_MA0485.1	1	1	+	11.471425023694367	9.911981449784307	GGCCATAAATCCC
chr10	67694084	67694085	chr10:67694085:T:C	rs12261511	T	C	T	Hoxc9_MA0485.1	3	1	+	8.522433900169645	9.410686673192268	TCATATAAATCAC
chr10	68032180	68032181	chr10:68032181:G:C	rs482806	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	68300455	68300456	chr10:68300456:A:C	rs10047388	A	C	c	Hoxc9_MA0485.1	10	1	+	8.72911206810968	11.413112401983629	AGCAATAAATAAA
chr10	68829160	68829161	chr10:68829161:G:A	rs185389058	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	68861744	68861745	chr10:68861745:C:A	rs7078797	C	A	a	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	69175758	69175759	chr10:69175759:C:T	rs12777604	C	T	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	69216140	69216141	chr10:69216141:C:T	rs5030937	C	T	T	Hoxc9_MA0485.1	12	1	-	8.272147801699	8.14646744486553	TAACATAAATCAG
chr10	69216159	69216160	chr10:69216160:C:T	rs5030938	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	69239735	69239736	chr10:69239736:C:T	rs7085830	C	T	C	Hoxc9_MA0485.1	1	1	-	7.964783401322452	6.405339827412392	GGCTATAAAACAA
chr10	69410025	69410026	chr10:69410026:G:A	rs12268055	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	69410027	69410028	chr10:69410028:G:A	rs113306961	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	69463951	69463952	chr10:69463952:A:G	rs12413394	A	G	g	Hoxc9_MA0485.1	4	1	+	9.572324136280265	8.404560422288682	TGCCATAAATCCA
chr10	69680453	69680454	chr10:69680454:G:A	rs10998910	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	69799966	69799967	chr10:69799967:C:T	rs2642608	C	T	C	Hoxc9_MA0485.1	2	1	-	7.914924864648911	8.691406033966466	GGGTGTAAATCTC
chr10	69801689	69801690	chr10:69801690:A:C	rs71480609	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	69868350	69868351	chr10:69868351:G:A	rs10999004	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr10	69868352	69868353	chr10:69868353:T:G	rs10762321	T	G	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	70273482	70273483	chr10:70273483:T:C	rs59514134	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	70432430	70432431	chr10:70432431:A:G	rs144307002	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	70590900	70590901	chr10:70590901:A:G	rs181936003	A	G	A	Hoxc9_MA0485.1	3	1	+	9.731300217287552	4.94965495287233	GCAAATAAATCAC
chr10	70927364	70927365	chr10:70927365:G:A	rs71477520	G	A	G	Hoxc9_MA0485.1	12	1	-	8.378439427352337	8.124442473587784	GGTAATGAATCAC
chr10	71088143	71088144	chr10:71088144:C:A	rs754973457	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	71130683	71130684	chr10:71130684:C:G	rs10823687	C	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	71284053	71284054	chr10:71284054:G:A	rs79599098	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	71324135	71324136	chr10:71324136:T:C	rs4348816	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	71577400	71577401	chr10:71577401:A:T	rs10999893	A	T	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	71585909	71585910	chr10:71585910:G:A	rs4372366	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	71588200	71588201	chr10:71588201:A:G	rs138622309	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	71669000	71669001	chr10:71669001:G:A	rs1625164	G	A	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	71786303	71786304	chr10:71786304:T:C	rs11000000	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	71850498	71850499	chr10:71850499:T:C	rs74234126	T	C	T	Hoxc9_MA0485.1	4	1	-	8.055129341819361	6.887365627827777	AGACATCAATCAA
chr10	71851253	71851254	chr10:71851254:A:G	rs143987544	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	71851285	71851286	chr10:71851286:G:A	rs145948209	G	A	G	Hoxc9_MA0485.1	12	1	+	8.608298835752167	8.482618478918697	AGATATAAATCTG
chr10	72009784	72009785	chr10:72009785:G:A	rs4148944	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	72009831	72009832	chr10:72009832:C:T	rs4148945	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	72375534	72375535	chr10:72375535:A:C	rs148491171	A	C	A	Hoxc9_MA0485.1	4	1	+	9.499824361375124	4.361897680125468	GGTCATAAATTAA
chr10	72418918	72418919	chr10:72418919:C:T	rs11000293	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	73246827	73246828	chr10:73246828:T:A	chr10:73246828:T:A	T	A	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	73480218	73480219	chr10:73480219:C:T	rs11000671	C	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	73747105	73747106	chr10:73747106:A:G	rs11000764	A	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	73918956	73918957	chr10:73918957:G:A	rs2227578	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	74089087	74089088	chr10:74089088:G:A	rs184420024	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	74145341	74145342	chr10:74145342:C:T	rs1342240774	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	74477739	74477740	chr10:74477740:C:T	rs7100550	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	75015659	75015660	chr10:75015660:G:A	rs12221048	G	A	g	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	75049062	75049063	chr10:75049063:T:C	rs7904278	T	C	T	Hoxc9_MA0485.1	4	1	-	9.438060815550365	8.270297101558782	TGACATAAATCTT
chr10	75111189	75111190	chr10:75111190:T:C	rs142322452	T	C	T	Hoxc9_MA0485.1	12	1	+	10.731830812949676	10.985827766714229	GGCAATAAATTAT
chr10	75188431	75188432	chr10:75188432:C:A	rs540672779	C	A	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	75238472	75238473	chr10:75238473:A:G	rs7894555	A	G	G	Hoxc9_MA0485.1	8	1	+	6.905412438973362	0.003453928838402287	GACCGTGAATCTC
chr10	75262702	75262703	chr10:75262703:C:T	rs12766938	C	T	c	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	75283864	75283865	chr10:75283865:G:A	rs190129228	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	75408356	75408357	chr10:75408357:A:C	rs548683202	A	C	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	75469220	75469221	chr10:75469221:A:G	rs145745844	A	G	A	Hoxc9_MA0485.1	2	1	-	9.046247464572492	10.423265941733714	CATCATAAATCAT
chr10	75708193	75708194	chr10:75708194:C:T	rs115486541	C	T	C	Hoxc9_MA0485.1	1	1	-	10.65821912608951	9.09877555217945	CGCAATAAATCAA
chr10	76071772	76071773	chr10:76071773:T:C	chr10:76071773:T:C	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	76115719	76115720	chr10:76115720:A:G	rs11001615	A	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	76191010	76191011	chr10:76191011:T:C	rs544522427	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr10	76319774	76319775	chr10:76319775:A:G	rs2758965	A	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	76319813	76319814	chr10:76319814:G:A	rs10824398	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	76353247	76353248	chr10:76353248:A:G	rs16933426	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	76581782	76581783	chr10:76581783:G:A	rs12098310	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	76711487	76711488	chr10:76711488:G:A	rs80059933	G	A	G	Hoxc9_MA0485.1	12	1	+	8.05748510305818	7.931804746224711	GGGCATAAATCCG
chr10	76963658	76963659	chr10:76963659:T:C	rs76758043	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	77030301	77030302	chr10:77030302:G:T	rs74140257	G	T	G	Hoxc9_MA0485.1	3	1	-	8.957439866132594	8.222688658562125	GGACATAAATTAA
chr10	77052126	77052127	chr10:77052127:A:G	rs115260706	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	77064309	77064310	chr10:77064310:T:C	rs1247763	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	77386444	77386445	chr10:77386445:A:G	rs71475653	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	77418285	77418286	chr10:77418286:G:C	rs28735	G	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	77455668	77455669	chr10:77455669:T:C	rs166991	T	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	77579390	77579391	chr10:77579391:A:G	rs148775652	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	77627353	77627354	chr10:77627354:C:T	rs734949	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	77633573	77633574	chr10:77633574:C:A	rs2619617	C	A	A	Hoxc9_MA0485.1	4	1	-	7.4428044736004155	4.941952945275401	CGCAGTCAATCAG
chr10	77633582	77633583	chr10:77633583:G:A	rs2673409	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	77708852	77708853	chr10:77708853:G:A	rs2619645	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	78087232	78087233	chr10:78087233:G:A	rs114169041	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr10	78448081	78448082	chr10:78448082:T:G	rs370277301	T	G	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	78448088	78448089	chr10:78448089:G:T	rs737150	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	78569634	78569635	chr10:78569635:T:C	rs164234	T	C	C	Hoxc9_MA0485.1	7	1	-	7.557032146982159	0.6528030777765805	GATCATCAATCTC
chr10	78777723	78777724	chr10:78777724:A:G	rs61852775	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr10	78785232	78785233	chr10:78785233:G:A	rs61852808	G	A	G	Hoxc9_MA0485.1	1	1	+	8.706498765239772	7.14705519132971	AGTAATCAATCAC
chr10	78785257	78785258	chr10:78785258:A:G	rs72812065	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	78876587	78876588	chr10:78876588:T:C	rs77239032	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	78985891	78985892	chr10:78985892:G:C	rs745494	G	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	79079511	79079512	chr10:79079512:G:A	rs4980024	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	79405980	79405981	chr10:79405981:A:G	rs10740505	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	79451269	79451270	chr10:79451270:G:A	rs56362036	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	79457418	79457419	chr10:79457419:C:T	rs11593844	C	T	c	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	79489036	79489037	chr10:79489037:C:T	rs75121429	C	T	.	Hoxc9_MA0485.1	6	1	+	8.055611226604189	6.700218056397653	GCCAGTCAATCAT
chr10	79836743	79836744	chr10:79836744:G:T	rs10749148	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr10	80203940	80203941	chr10:80203941:A:T	rs75831912	A	T	a	Hoxc9_MA0485.1	2	1	-	9.209399113793724	8.667014618551192	GGTCATAAATAAT
chr10	80510275	80510276	chr10:80510276:G:A	rs882682	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	80598597	80598598	chr10:80598598:G:A	rs11186224	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	81307511	81307512	chr10:81307512:T:C	rs11189308	T	C	T	Hoxc9_MA0485.1	5	1	+	10.026524562870877	5.541213200232392	GGAAATAAATCAA
chr10	81315017	81315018	chr10:81315018:A:G	rs1021991	A	G	A	Hoxc9_MA0485.1	5	1	-	10.843749034312102	6.3584376716736175	CCCCATAAATCAT
chr10	81503685	81503686	chr10:81503686:T:C	rs4478934	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	81524535	81524536	chr10:81524536:A:G	rs10786574	A	G	G	Hoxc9_MA0485.1	4	1	+	9.094572386487854	7.92680867249627	GGCTATAAATATC
chr10	81633430	81633431	chr10:81633431:G:A	rs17710692	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	83374199	83374200	chr10:83374200:C:T	rs10886221	C	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr10	83469628	83469629	chr10:83469629:C:T	rs10787946	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	83608493	83608494	chr10:83608494:G:A	rs10886741	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	83872061	83872062	chr10:83872062:A:C	rs10788288	A	C	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	84185098	84185099	chr10:84185099:T:A	rs13697	T	A	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	84198461	84198462	chr10:84198462:C:T	rs17103203	C	T	C	Hoxc9_MA0485.1	10	1	+	11.290274224345076	9.486438320036324	AGCCATAAATCTA
chr10	84234623	84234624	chr10:84234624:G:A	rs6585848	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	84352316	84352317	chr10:84352317:C:A	rs76960397	C	A	c	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	84567220	84567221	chr10:84567221:C:T	rs10887320	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr10	84876221	84876222	chr10:84876222:G:A	rs7902520	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	85195121	85195122	chr10:85195122:A:G	rs17370747	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	85213739	85213740	chr10:85213740:C:A	rs55750333	C	A	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	85524533	85524534	chr10:85524534:T:C	rs115323077	T	C	T	Hoxc9_MA0485.1	5	1	+	7.110967321903343	2.625655959264857	AGCCATAAAACCC
chr10	85524549	85524550	chr10:85524550:C:T	rs145970480	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	85601032	85601033	chr10:85601033:T:C	rs41313469	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	85994440	85994441	chr10:85994441:G:A	rs7095652	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	86103860	86103861	chr10:86103861:A:G	rs138722565	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	86308698	86308699	chr10:86308699:C:T	rs182018819	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	86341609	86341610	chr10:86341610:T:C	rs10509530	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	86364448	86364449	chr10:86364449:G:T	rs115393734	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	86665869	86665870	chr10:86665870:C:T	rs540403228	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr10	87096374	87096375	chr10:87096375:A:G	rs549856803	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	87401566	87401567	chr10:87401567:T:C	rs117548383	T	C	T	Hoxc9_MA0485.1	9	1	+	9.477371894360326	2.5891460799866914	GCCAATCAATCAC
chr10	87547834	87547835	chr10:87547835:A:G	rs7919087	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	87694362	87694363	chr10:87694363:A:G	rs12253888	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	87763271	87763272	chr10:87763272:C:T	rs541199400	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	88029131	88029132	chr10:88029132:G:C	rs2785080	G	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	88111216	88111217	chr10:88111217:A:G	rs72816183	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	88266251	88266252	chr10:88266252:T:G	rs73348657	T	G	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	88401828	88401829	chr10:88401829:T:C	rs79065028	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	88471960	88471961	chr10:88471961:T:C	rs1183901	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	88490236	88490237	chr10:88490237:G:C	rs2576175	G	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	88642627	88642628	chr10:88642628:A:G	rs10749594	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	88913289	88913290	chr10:88913290:G:A	rs34270879	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	88913307	88913308	chr10:88913308:G:A	rs9988723	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	89000349	89000350	chr10:89000350:T:C	rs2182408	T	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	89217212	89217213	chr10:89217213:T:G	chr10:89217213:T:G	T	G	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	89346724	89346725	chr10:89346725:C:T	rs73367441	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	89522540	89522541	chr10:89522541:T:C	rs11185738	T	C	T	Hoxc9_MA0485.1	4	1	-	8.082736276181157	6.914972562189572	TGCCATTAATCTC
chr10	89606953	89606954	chr10:89606954:T:C	rs11185784	T	C	t	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	90175224	90175225	chr10:90175225:G:A	rs7100722	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	90175248	90175249	chr10:90175249:C:T	rs75525048	C	T	C	Hoxc9_MA0485.1	10	1	+	7.705947118086946	5.902111213778194	GCAAGTAAATCTC
chr10	90407747	90407748	chr10:90407748:T:C	rs1341827	T	C	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	90603336	90603337	chr10:90603337:C:T	rs1299939	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	90642172	90642173	chr10:90642173:C:T	rs2420187	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	90787550	90787551	chr10:90787551:G:A	rs7090415	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	90816690	90816691	chr10:90816691:T:C	rs11186320	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	90847007	90847008	chr10:90847008:G:A	rs553820535	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	91526027	91526028	chr10:91526028:C:T	rs539318863	C	T	c	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	91604287	91604288	chr10:91604288:C:T	rs137902726	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	92240360	92240361	chr10:92240361:G:A	rs566091246	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	92593847	92593848	chr10:92593848:T:C	rs138093491	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	92880480	92880481	chr10:92880481:T:C	chr10:92880481:T:C	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	93061102	93061103	chr10:93061103:A:G	rs1538648	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	93320164	93320165	chr10:93320165:T:C	rs78775273	T	C	T	Hoxc9_MA0485.1	4	1	-	10.15394614883179	8.986182434840206	CTCCATAAATCAC
chr10	93377280	93377281	chr10:93377281:C:T	rs201851210	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	93408876	93408877	chr10:93408877:A:G	rs2296142	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr10	93437568	93437569	chr10:93437569:C:T	rs765521758	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	93442624	93442625	chr10:93442625:C:G	rs149120398	C	G	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	93512658	93512659	chr10:93512659:G:A	rs564825724	G	A	G	Hoxc9_MA0485.1	1	1	-	8.906553632874846	7.962753793629983	ACCTATAAATTAT
chr10	93512661	93512662	chr10:93512662:T:A	rs11187489	T	A	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	93548911	93548912	chr10:93548912:G:A	rs77653245	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr10	93747193	93747194	chr10:93747194:G:A	rs17109271	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	93760273	93760274	chr10:93760274:A:G	rs1555869	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	94194469	94194470	chr10:94194470:A:G	rs144362794	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr10	94199709	94199710	chr10:94199710:G:A	rs2797993	G	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	94211708	94211709	chr10:94211709:T:G	rs12769135	T	G	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	95249899	95249900	chr10:95249900:G:A	rs10882573	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	95445508	95445509	chr10:95445509:T:C	chr10:95445509:T:C	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	95446088	95446089	chr10:95446089:C:G	rs964902481	C	G	C	Hoxc9_MA0485.1	11	1	+	7.765074197823564	5.405530653854275	GGCAGTAAATTCC
chr10	95831539	95831540	chr10:95831540:T:C	rs1891536	T	C	T	Hoxc9_MA0485.1	8	1	-	8.552997199787617	1.6510386896526568	AGTTATCAATCAC
chr10	96188849	96188850	chr10:96188850:T:C	rs10748664	T	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	96671637	96671638	chr10:96671638:A:G	rs78340939	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	96673779	96673780	chr10:96673780:G:A	rs1401093444	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	97105528	97105529	chr10:97105529:A:G	rs2817692	A	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	97211267	97211268	chr10:97211268:G:A	rs1253425	G	A	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	97278775	97278776	chr10:97278776:T:C	chr10:97278776:T:C	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	97278804	97278805	chr10:97278805:G:A	rs701821	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	97278806	97278807	chr10:97278807:C:A	rs565564465	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	97514678	97514679	chr10:97514679:C:T	rs11596272	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	97515511	97515512	chr10:97515512:A:G	rs113973007	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	97733509	97733510	chr10:97733510:A:G	rs72835970	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	97765435	97765436	chr10:97765436:C:T	rs79492186	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	98212365	98212366	chr10:98212366:T:G	rs10883053	T	G	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	98245524	98245525	chr10:98245525:C:T	rs10786405	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	98404340	98404341	chr10:98404341:T:C	rs77732155	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	98490294	98490295	chr10:98490295:G:T	rs75853200	G	T	G	Hoxc9_MA0485.1	1	1	+	6.625871902873855	4.543111582297317	GGCCAGAAATCAC
chr10	98672559	98672560	chr10:98672560:T:C	rs78902012	T	C	T	Hoxc9_MA0485.1	5	1	+	9.089569058495043	4.6042576958565595	TGCCATAAATTTG
chr10	98717515	98717516	chr10:98717516:C:G	rs11189768	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr10	98990452	98990453	chr10:98990453:G:A	rs10883241	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr10	99024976	99024977	chr10:99024977:A:C	rs72838806	A	C	A	Hoxc9_MA0485.1	3	1	+	9.318851250093477	10.053602457663947	AGCAATAAATAAT
chr10	99371097	99371098	chr10:99371098:A:G	rs2002059	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	99619165	99619166	chr10:99619166:T:C	rs7908026	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	99676755	99676756	chr10:99676756:T:C	rs77987946	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	99938737	99938738	chr10:99938738:G:A	rs6584334	G	A	.	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	99938751	99938752	chr10:99938752:G:C	rs115967577	G	C	.	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	99938761	99938762	chr10:99938762:T:A	rs75835964	T	A	.	Hoxc9_MA0485.1	9	1	+	9.304184896446854	5.47654232794683	AGTAATAAATCTG
chr10	99984075	99984076	chr10:99984076:G:A	rs552256860	G	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr10	100647415	100647416	chr10:100647416:C:T	rs7068072	C	T	C	Hoxc9_MA0485.1	0	1	+	6.895513894235276	7.127857551754644	CGCCATGAATCCT
chr10	100897139	100897140	chr10:100897140:T:C	rs10509746	T	C	C	Hoxc9_MA0485.1	11	1	-	8.964323007099777	4.5517896082314095	TCTAATAAATCAT
chr10	101301975	101301976	chr10:101301976:A:C	rs609107	A	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	101356321	101356322	chr10:101356322:C:T	rs11190957	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr10	101551755	101551756	chr10:101551756:T:C	rs3127239	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	101559415	101559416	chr10:101559416:T:C	rs140957486	T	C	T	Hoxc9_MA0485.1	0	1	-	10.038936104017322	10.571751237308323	AGTCATAAATCTG
chr10	101626923	101626924	chr10:101626924:T:G	rs3095790	T	G	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	101660471	101660472	chr10:101660472:A:C	rs1292696276	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	101838552	101838553	chr10:101838553:C:G	rs144853920	C	G	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	101938947	101938948	chr10:101938948:G:A	rs34014631	G	A	G	Hoxc9_MA0485.1	0	1	+	10.244881479870175	9.712066346579173	GGTAGTAAATCAC
chr10	102641780	102641781	chr10:102641781:A:T	rs530209439	A	T	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	102665546	102665547	chr10:102665547:A:T	rs3961456	A	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	102719627	102719628	chr10:102719628:C:A	rs17784294	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	102901487	102901488	chr10:102901488:C:T	rs17884001	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	102997995	102997996	chr10:102997996:T:C	rs35791366	T	C	T	Hoxc9_MA0485.1	8	1	-	8.731954247304598	1.8299957371696398	AGCCATAAATATG
chr10	103121644	103121645	chr10:103121645:T:C	rs10883834	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	103247770	103247771	chr10:103247771:C:T	rs4917386	C	T	C	Hoxc9_MA0485.1	4	1	-	6.99136953304013	8.159133247031713	GCCCGTCAATCCC
chr10	103403774	103403775	chr10:103403775:C:T	rs17735615	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	103427947	103427948	chr10:103427948:A:C	chr10:103427948:A:C	A	C	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	103427950	103427951	chr10:103427951:C:T	chr10:103427951:C:T	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	103427988	103427989	chr10:103427989:G:A	rs11191686	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	103486092	103486093	chr10:103486093:C:T	rs184940756	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr10	103675257	103675258	chr10:103675258:G:A	rs76915837	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr10	103733386	103733387	chr10:103733387:C:T	rs117140591	C	T	C	Hoxc9_MA0485.1	2	1	+	10.050357117380742	8.67333864021952	AGCTATAAATCCC
chr10	103844829	103844830	chr10:103844830:C:T	rs145937576	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	103936624	103936625	chr10:103936625:T:C	rs7071685	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	103949791	103949792	chr10:103949792:C:T	rs1114994	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr10	104122135	104122136	chr10:104122136:G:A	chr10:104122136:G:A	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	104122166	104122167	chr10:104122167:T:A	chr10:104122167:T:A	T	A	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	104123636	104123637	chr10:104123637:A:C	rs1338777	A	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	104123665	104123666	chr10:104123666:A:G	rs141044712	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	104216693	104216694	chr10:104216694:T:C	rs601019	T	C	C	Hoxc9_MA0485.1	4	1	-	7.828535808480775	6.66077209448919	TGCTATGAATCAG
chr10	104245970	104245971	chr10:104245971:G:T	rs11191970	G	T	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	104245976	104245977	chr10:104245977:T:C	rs612406	T	C	-	Hoxc9_MA0485.1	0	1	+	9.454948866392069	9.222605208872702	TGCAGTAAATCTT
chr10	104681149	104681150	chr10:104681150:C:G	rs17184053	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr10	104895932	104895933	chr10:104895933:C:T	rs186009745	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	104961851	104961852	chr10:104961852:G:A	rs7909012	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	105063203	105063204	chr10:105063204:A:G	rs73342230	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	105147479	105147480	chr10:105147480:A:G	rs10160134	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	105658769	105658770	chr10:105658770:A:G	rs11192543	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr10	105758858	105758859	chr10:105758859:T:C	rs6584694	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	106136428	106136429	chr10:106136429:A:C	rs4495831	A	C	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr10	106254259	106254260	chr10:106254260:C:A	rs11192804	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	106516638	106516639	chr10:106516639:C:A	rs11599633	C	A	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	106615091	106615092	chr10:106615092:G:A	rs7095267	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	106800278	106800279	chr10:106800279:A:G	rs822000	A	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	106820197	106820198	chr10:106820198:C:T	rs953591	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr10	106894639	106894640	chr10:106894640:C:A	rs80204615	C	A	C	Hoxc9_MA0485.1	10	1	+	9.242623285847563	6.558622951973614	AGCCATCAATCTG
chr10	107039998	107039999	chr10:107039999:G:A	rs11193183	G	A	G	Hoxc9_MA0485.1	1	1	+	8.484444923984029	6.925001350073969	CGCCATGAATCAG
chr10	107092020	107092021	chr10:107092021:A:T	rs9783169	A	T	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	107340244	107340245	chr10:107340245:C:T	rs12782752	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	107685766	107685767	chr10:107685767:C:T	rs2246222	C	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	107970638	107970639	chr10:107970639:C:T	rs10884579	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	108361488	108361489	chr10:108361489:C:T	rs10884631	C	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	108448492	108448493	chr10:108448493:C:T	rs1329504	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	108634438	108634439	chr10:108634439:C:T	rs2497174	C	T	T	Hoxc9_MA0485.1	2	1	+	8.274157968770465	6.897139491609242	AGCTGTAAATTTC
chr10	108903186	108903187	chr10:108903187:T:C	rs73346633	T	C	T	Hoxc9_MA0485.1	1	1	+	8.793949213571667	9.73774905281653	TTCAATAAATCTC
chr10	109237811	109237812	chr10:109237812:T:C	rs17126045	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	109450984	109450985	chr10:109450985:G:T	rs80343163	G	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	109628648	109628649	chr10:109628649:T:G	rs61881856	T	G	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	109770795	109770796	chr10:109770796:T:C	rs1268466	T	C	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	109994874	109994875	chr10:109994875:T:C	rs17126931	T	C	T	Hoxc9_MA0485.1	6	1	-	9.622315289109673	6.588109522600251	GCACATAAATCAA
chr10	110078749	110078750	chr10:110078750:T:C	rs10787224	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	110161550	110161551	chr10:110161551:G:A	rs113568791	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr10	110161567	110161568	chr10:110161568:A:G	rs74154991	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	110398770	110398771	chr10:110398771:C:T	rs561374102	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr10	110398771	110398772	chr10:110398772:G:A	rs113376210	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	110609783	110609784	chr10:110609784:C:T	rs562978996	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	110609949	110609950	chr10:110609950:T:C	rs17827061	T	C	T	Hoxc9_MA0485.1	4	1	-	7.973534707971797	6.8057709939802145	GGAAATAAATCCA
chr10	110667942	110667943	chr10:110667943:C:T	rs113450459	C	T	C	Hoxc9_MA0485.1	4	1	-	8.178816587949225	9.34658030194081	GTTCGTAAATCAG
chr10	110844409	110844410	chr10:110844410:A:C	rs79019242	A	C	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr10	111221107	111221108	chr10:111221108:T:C	rs7917244	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	111261304	111261305	chr10:111261305:G:A	rs9804290	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	111317252	111317253	chr10:111317253:A:G	rs7912815	A	G	A	Hoxc9_MA0485.1	8	1	+	8.122318905428406	1.2203603952934459	TGACATCAATCAT
chr10	111317265	111317266	chr10:111317266:C:T	rs7912918	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	111392536	111392537	chr10:111392537:G:A	rs10885155	G	A	G	Hoxc9_MA0485.1	12	1	-	10.048803359662022	9.79480640589747	ACCCATAAATTAC
chr10	111611792	111611793	chr10:111611793:T:G	rs35396261	T	G	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	111756391	111756392	chr10:111756392:G:A	rs12413721	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	111926586	111926587	chr10:111926587:C:T	rs2080647	C	T	T	Hoxc9_MA0485.1	1	1	-	8.883900560146527	7.324456986236467	GGCTATGAATCAG
chr10	112020690	112020691	chr10:112020691:T:C	rs11195790	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	112184512	112184513	chr10:112184513:A:G	rs2419604	A	G	A	Hoxc9_MA0485.1	9	1	-	8.665375110622746	1.777149296249115	TGCTATAAATTTT
chr10	112184540	112184541	chr10:112184541:A:C	rs114764519	A	C	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	112360145	112360146	chr10:112360146:A:T	rs71483147	A	T	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr10	112498963	112498964	chr10:112498964:G:A	rs10885356	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	112692939	112692940	chr10:112692940:T:C	rs111727901	T	C	T	Hoxc9_MA0485.1	11	1	+	7.963494472330958	6.7680940026409	GTCAGTAAATCTG
chr10	112784171	112784172	chr10:112784172:T:A	rs138185531	T	A	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	112789436	112789437	chr10:112789437:G:A	rs4918773	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	112797409	112797410	chr10:112797410:C:G	rs76569056	C	G	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr10	112842984	112842985	chr10:112842985:G:A	rs10885388	G	A	G	Hoxc9_MA0485.1	3	1	-	10.162325931604439	9.274073158581816	TCCCGTAAATCAC
chr10	112939290	112939291	chr10:112939291:C:T	rs11196161	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	113028351	113028352	chr10:113028352:G:A	rs564503600	G	A	G	Hoxc9_MA0485.1	4	1	+	9.050739592630864	10.218503306622447	TCCCGTAAATCTT
chr10	113182518	113182519	chr10:113182519:T:C	rs7900784	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	113272648	113272649	chr10:113272649:T:A	rs10787482	T	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	113340546	113340547	chr10:113340547:A:G	rs10885432	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	113382500	113382501	chr10:113382501:G:C	rs7089082	G	C	G	Hoxc9_MA0485.1	0	1	+	9.375723750386793	8.088015341201672	GGGAATAAATCAG
chr10	113382522	113382523	chr10:113382523:C:T	rs139385895	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr10	114022506	114022507	chr10:114022507:C:T	rs115384982	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr10	114022511	114022512	chr10:114022512:A:G	rs10490905	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	114242507	114242508	chr10:114242508:A:G	rs11597476	A	G	A	Hoxc9_MA0485.1	3	1	+	8.37447917828482	3.5928339138695997	ACCAGTAAATCTG
chr10	114462989	114462990	chr10:114462990:G:A	rs7920878	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	114479290	114479291	chr10:114479291:C:T	rs531208430	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	114502358	114502359	chr10:114502359:T:C	rs80180774	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr10	114548222	114548223	chr10:114548223:C:A	rs2497718	C	A	C	Hoxc9_MA0485.1	3	1	+	10.36010129806117	9.625350090490702	GCCCGTAAATCTC
chr10	114749045	114749046	chr10:114749046:T:G	rs11196898	T	G	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	114749124	114749125	chr10:114749125:G:A	rs79145028	G	A	G	Hoxc9_MA0485.1	10	1	-	11.710974350918836	9.907138446610084	GACCATAAATCAT
chr10	114867400	114867401	chr10:114867401:T:G	rs7094072	T	G	T	Hoxc9_MA0485.1	4	1	-	10.587952827522166	5.4500261462725055	GATCATAAATCAC
chr10	115772787	115772788	chr10:115772788:G:A	chr10:115772788:G:A	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	115942574	115942575	chr10:115942575:A:G	rs56045626	A	G	a	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	116054229	116054230	chr10:116054230:C:G	rs180559	C	G	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	116101179	116101180	chr10:116101180:G:C	rs2694779	G	C	G	Hoxc9_MA0485.1	6	1	+	8.224937861900182	9.085812333078621	GGTTATGAATCAC
chr10	116527886	116527887	chr10:116527887:A:G	rs10787707	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	116587749	116587750	chr10:116587750:A:G	rs11197742	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	116656381	116656382	chr10:116656382:T:A	rs11197785	T	A	A	Hoxc9_MA0485.1	2	1	+	8.92249259080985	8.380108095567318	AGTTATAAATTAC
chr10	116683399	116683400	chr10:116683400:C:G	rs3010460	C	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	116690828	116690829	chr10:116690829:A:G	rs149079214	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	116776980	116776981	chr10:116776981:C:T	rs1900501	C	T	C	Hoxc9_MA0485.1	4	1	-	9.722799069617295	10.890562783608878	TGCAGTAAATCAA
chr10	116947997	116947998	chr10:116947998:A:T	rs141818650	A	T	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	116948373	116948374	chr10:116948374:C:T	rs114349382	C	T	C	Hoxc9_MA0485.1	12	1	+	7.557032146982159	7.3030351932176085	GATCATCAATCTC
chr10	117346991	117346992	chr10:117346992:T:G	rs2532796	T	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	117364192	117364193	chr10:117364193:T:C	rs1297142941	T	C	-	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	117367138	117367139	chr10:117367139:T:C	rs12247698	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr10	117457559	117457560	chr10:117457560:G:A	rs1224283945	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr10	117503534	117503535	chr10:117503535:C:T	chr10:117503535:C:T	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	117583179	117583180	chr10:117583180:T:C	rs6585442	T	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	117668429	117668430	chr10:117668430:G:A	rs7894825	G	A	A	Hoxc9_MA0485.1	12	1	+	7.926359330007958	7.800678973174487	AACAATAAATCCG
chr10	118047740	118047741	chr10:118047741:A:G	rs80342815	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	118222240	118222241	chr10:118222241:A:G	rs1764192	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	118307937	118307938	chr10:118307938:G:A	rs17618810	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	118311196	118311197	chr10:118311197:G:A	rs3213691	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr10	118434140	118434141	chr10:118434141:G:T	rs12240742	G	T	-	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	118450655	118450656	chr10:118450656:G:A	rs7088823	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	118497217	118497218	chr10:118497218:C:T	rs41336047	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	118873688	118873689	chr10:118873689:A:T	rs7905725	A	T	A	Hoxc9_MA0485.1	4	1	+	9.455774932222722	5.787159689906127	AGCTATAAATTAA
chr10	118893444	118893445	chr10:118893445:C:T	rs7092342	C	T	C	Hoxc9_MA0485.1	12	1	-	10.633027804347588	10.507347447514118	GGCCATCAATCAG
chr10	119319310	119319311	chr10:119319311:C:T	rs574387785	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr10	119319332	119319333	chr10:119319333:G:A	rs4237511	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	119412713	119412714	chr10:119412714:T:C	chr10:119412714:T:C	T	C	T	Hoxc9_MA0485.1	5	1	+	9.012063500528505	4.526752137890019	GGCCTTAAATCAA
chr10	119412726	119412727	chr10:119412727:A:G	rs78989097	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	120049104	120049105	chr10:120049105:G:T	rs12246811	G	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	120116208	120116209	chr10:120116209:C:T	rs7894011	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	120347700	120347701	chr10:120347701:G:C	rs11199292	G	C	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	120376119	120376120	chr10:120376120:T:C	rs12217896	T	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	120376121	120376122	chr10:120376122:G:A	rs10886677	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	120430329	120430330	chr10:120430330:T:G	rs1326656	T	G	G	Hoxc9_MA0485.1	4	1	-	8.743631878038578	3.605705196788919	ACTTATAAATCAA
chr10	120487726	120487727	chr10:120487727:G:T	rs2901241	G	T	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr10	120500079	120500080	chr10:120500080:A:G	rs12784524	A	G	G	Hoxc9_MA0485.1	7	1	+	8.320094271885138	1.4158652026795593	GGACATCAATCTT
chr10	121001365	121001366	chr10:121001366:A:T	rs12253761	A	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr10	121025529	121025530	chr10:121025530:A:G	rs10788137	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr10	121025536	121025537	chr10:121025537:G:T	rs10886842	G	T	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	121172489	121172490	chr10:121172490:T:C	rs754227	T	C	C	Hoxc9_MA0485.1	4	1	-	8.934050624143383	7.766286910151799	GACCATCAATCTC
chr10	121188235	121188236	chr10:121188236:C:T	rs145743977	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr10	121244999	121245000	chr10:121245000:C:A	rs56663395	C	A	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	121245288	121245289	chr10:121245289:A:G	rs2201024	A	G	a	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr10	121295316	121295317	chr10:121295317:G:A	rs182068620	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	121554015	121554016	chr10:121554016:T:C	rs17102202	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	121999599	121999600	chr10:121999600:T:C	rs183465268	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr10	122113740	122113741	chr10:122113741:A:C	rs531267249	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	122222456	122222457	chr10:122222457:G:A	rs7072025	G	A	G	Hoxc9_MA0485.1	0	1	-	6.871424837846591	7.1037684953659594	CCCCATCAATCCC
chr10	122560599	122560600	chr10:122560600:A:G	rs74629622	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr10	122560677	122560678	chr10:122560678:T:C	rs2981745	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr10	122569700	122569701	chr10:122569701:G:A	rs2981786	G	A	g	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	123230481	123230482	chr10:123230482:C:G	rs149072017	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	123288094	123288095	chr10:123288095:T:C	rs182259489	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	123452128	123452129	chr10:123452129:G:C	rs9328846	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr10	123500263	123500264	chr10:123500264:A:G	rs10902937	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr10	123575432	123575433	chr10:123575433:C:T	rs1317737	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	123732343	123732344	chr10:123732344:G:A	rs8181355	G	A	G	Hoxc9_MA0485.1	4	1	+	8.531936340507958	9.699700054499543	GATTGTAAATCAC
chr10	123778841	123778842	chr10:123778842:T:G	rs76494178	T	G	T	Hoxc9_MA0485.1	8	1	-	8.18019567130527	3.3297934993606106	GGCTGTGAATCAT
chr10	123803963	123803964	chr10:123803964:G:C	rs60604705	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	123914877	123914878	chr10:123914878:A:G	rs28449601	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	123930913	123930914	chr10:123930914:G:A	rs149698956	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	124005843	124005844	chr10:124005844:T:G	rs76209320	T	G	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr10	124110969	124110970	chr10:124110970:A:G	rs925307433	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	124146849	124146850	chr10:124146850:T:G	rs927531152	T	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr10	124149838	124149839	chr10:124149839:C:T	rs36168116	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr10	124149857	124149858	chr10:124149858:G:A	rs924181883	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	124271072	124271073	chr10:124271073:G:A	rs10794172	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	124581371	124581372	chr10:124581372:A:C	rs4962389	A	C	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr10	124581380	124581381	chr10:124581381:G:A	rs4962663	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr10	124588955	124588956	chr10:124588956:G:A	rs115428534	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	124589020	124589021	chr10:124589021:G:T	rs12357619	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr10	124590078	124590079	chr10:124590079:T:C	rs10430737	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr10	124608638	124608639	chr10:124608639:G:A	rs11245314	G	A	A	Hoxc9_MA0485.1	10	1	-	7.533375448354859	5.729539544046108	CTCAGTAAATCAG
chr10	124886768	124886769	chr10:124886769:C:T	rs563625523	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	125032691	125032692	chr10:125032692:T:C	rs35060373	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	125194912	125194913	chr10:125194913:C:T	rs56091729	C	T	C	Hoxc9_MA0485.1	1	1	+	7.6058590195183795	6.662059180273514	ACCCATTAATCAG
chr10	125392752	125392753	chr10:125392753:T:C	rs4962296	T	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	125554142	125554143	chr10:125554143:G:A	rs146979264	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr10	125554144	125554145	chr10:125554145:C:G	rs11244550	C	G	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr10	125881411	125881412	chr10:125881412:C:T	rs73381281	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr10	126055123	126055124	chr10:126055124:C:T	rs1710290	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	126064635	126064636	chr10:126064636:G:A	rs56381421	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr10	126064639	126064640	chr10:126064640:T:C	rs2279089	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	126253435	126253436	chr10:126253436:G:C	rs2279753	G	C	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	126456348	126456349	chr10:126456349:G:A	rs12246117	G	A	G	Hoxc9_MA0485.1	1	1	+	7.6437824551943425	6.084338881284283	GGCCATAAAACCC
chr10	126525597	126525598	chr10:126525598:C:G	rs7358129	C	G	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	126544349	126544350	chr10:126544350:C:A	rs2033699	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr10	126650076	126650077	chr10:126650077:C:A	rs73370866	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr10	126958549	126958550	chr10:126958550:G:A	rs1018820392	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	126958966	126958967	chr10:126958967:C:T	rs1022676072	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	127024716	127024717	chr10:127024717:G:A	rs11595439	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	127149026	127149027	chr10:127149027:T:C	rs181493344	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	127221308	127221309	chr10:127221309:A:T	rs12146152	A	T	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	127247358	127247359	chr10:127247359:G:A	rs12766027	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	127319456	127319457	chr10:127319457:C:T	rs10829749	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr10	127585561	127585562	chr10:127585562:A:G	rs1984113	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	127588093	127588094	chr10:127588094:T:A	rs1931720	T	A	A	Hoxc9_MA0485.1	3	1	-	9.344400604206458	9.190899038754305	GACAGTAAATCAG
chr10	127833002	127833003	chr10:127833003:A:G	rs146295819	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	127840401	127840402	chr10:127840402:A:G	rs61874796	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr10	127880409	127880410	chr10:127880410:T:C	rs6482992	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	127885482	127885483	chr10:127885483:A:G	rs7077238	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr10	128377497	128377498	chr10:128377498:T:C	rs11016203	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr10	128392218	128392219	chr10:128392219:G:T	rs7901381	G	T	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr10	128634498	128634499	chr10:128634499:T:C	rs12244073	T	C	T	Hoxc9_MA0485.1	6	1	-	9.479856180119201	6.44565041360978	AGAAATAAATCTC
chr10	128743212	128743213	chr10:128743213:C:T	rs4751003	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	128744607	128744608	chr10:128744608:C:T	rs72854612	C	T	C	Hoxc9_MA0485.1	4	1	-	8.066342278790414	9.234105992781998	GGCTGTAAATAAG
chr10	128824848	128824849	chr10:128824849:A:T	rs1408533	A	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr10	128882597	128882598	chr10:128882598:C:T	rs79348487	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr10	128883331	128883332	chr10:128883332:T:C	rs117222325	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr10	128892920	128892921	chr10:128892921:T:C	rs34694726	T	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	129108567	129108568	chr10:129108568:T:C	rs61859259	T	C	T	Hoxc9_MA0485.1	8	1	-	8.156736923712355	1.254778413577395	GTCCATCAATCTT
chr10	129116575	129116576	chr10:129116576:C:T	rs10741180	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	129123579	129123580	chr10:129123580:C:T	rs117356471	C	T	C	Hoxc9_MA0485.1	1	1	-	6.862763673510331	5.30332009960027	AGCAGTCAATCCC
chr10	129165235	129165236	chr10:129165236:A:G	rs2209592	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr10	129372269	129372270	chr10:129372270:C:T	rs77530674	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr10	129372274	129372275	chr10:129372275:C:T	rs79317721	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr10	129519679	129519680	chr10:129519680:T:C	rs3802689	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	129523526	129523527	chr10:129523527:G:A	rs11813530	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	129759668	129759669	chr10:129759669:G:A	rs3793905	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	129773707	129773708	chr10:129773708:C:T	rs10829629	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	129892026	129892027	chr10:129892027:G:A	rs145007430	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	129951618	129951619	chr10:129951619:C:G	rs493238	C	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr10	129967318	129967319	chr10:129967319:C:T	rs117304624	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr10	130128177	130128178	chr10:130128178:T:A	rs17232143	T	A	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr10	130225137	130225138	chr10:130225138:T:G	rs10829717	T	G	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr10	130242598	130242599	chr10:130242599:T:C	rs1043892293	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	130252511	130252512	chr10:130252512:C:T	rs7085097	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	130282470	130282471	chr10:130282471:C:T	rs12098605	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr10	130353913	130353914	chr10:130353914:C:T	rs12569655	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr10	130364499	130364500	chr10:130364500:G:C	rs55871010	G	C	C	Hoxc9_MA0485.1	6	1	-	7.971602514829814	7.110728043651377	GGCCATCAATTTG
chr10	130403789	130403790	chr10:130403790:C:T	rs10430606	C	T	C	Hoxc9_MA0485.1	0	1	-	8.360863880043452	7.828048746752452	GCTCATAAATTAA
chr10	130452325	130452326	chr10:130452326:T:C	rs359063	T	C	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr10	130565904	130565905	chr10:130565905:G:C	rs12782432	G	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	130568265	130568266	chr10:130568266:C:T	rs4751239	C	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr10	130627565	130627566	chr10:130627566:G:A	rs80149969	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr10	130810428	130810429	chr10:130810429:G:C	rs1655172	G	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr10	130844521	130844522	chr10:130844522:C:T	rs1703714	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	130934062	130934063	chr10:130934063:A:G	rs1703726	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr10	130935632	130935633	chr10:130935633:G:A	rs11017586	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr10	131075880	131075881	chr10:131075881:G:A	rs117316278	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	131182668	131182669	chr10:131182669:G:A	rs999191	G	A	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr10	131427487	131427488	chr10:131427488:G:C	rs3123165	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr10	131687515	131687516	chr10:131687516:G:C	rs117309500	G	C	G	Hoxc9_MA0485.1	2	1	-	9.668234027436279	6.97234988571497	TTCCATAAATCAG
chr10	131840135	131840136	chr10:131840136:A:G	rs11818079	A	G	A	Hoxc9_MA0485.1	8	1	+	7.262559074585929	0.3606005644509692	CTCCATCAATCAG
chr10	131856770	131856771	chr10:131856771:G:T	rs983555073	G	T	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	131911074	131911075	chr10:131911075:G:C	rs1051095856	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr10	131911115	131911116	chr10:131911116:A:G	rs36138182	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr10	132001232	132001233	chr10:132001233:C:G	rs11146518	C	G	G	Hoxc9_MA0485.1	2	1	+	9.084922302718777	6.389038160997465	CACAATAAATCTC
chr10	132016670	132016671	chr10:132016671:C:A	rs147324567	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr10	132106668	132106669	chr10:132106669:C:T	rs2379229	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr10	132112603	132112604	chr10:132112604:C:T	rs7923067	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr10	132175613	132175614	chr10:132175614:C:T	rs2814167	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr10	132333158	132333159	chr10:132333159:G:C	rs148156609	G	C	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr10	132335833	132335834	chr10:132335834:C:A	chr10:132335834:C:A	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr10	132391785	132391786	chr10:132391786:G:T	rs55763960	G	T	G	Hoxc9_MA0485.1	10	1	-	6.3812027701707414	3.6972024362967915	GGCTGTGAATCCC
chr10	132563795	132563796	chr10:132563796:C:T	rs77874356	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr10	132618656	132618657	chr10:132618657:C:G	rs112875307	C	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr10	132678399	132678400	chr10:132678400:A:G	rs2786891	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr10	132787981	132787982	chr10:132787982:G:A	rs545697909	G	A	g	Hoxc9_MA0485.1	27	0	-	0	0	.
chr10	132883163	132883164	chr10:132883164:G:C	rs2387075	G	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr10	132892572	132892573	chr10:132892573:C:T	rs7076681	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr10	133104329	133104330	chr10:133104330:T:C	rs7070794	T	C	T	Hoxc9_MA0485.1	5	1	+	7.8575176432729785	3.372206280634491	GTGTATAAATCAC
chr10	133278297	133278298	chr10:133278298:C:T	rs1573041	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr10	133285325	133285326	chr10:133285326:T:C	rs3008335	T	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr10	133285340	133285341	chr10:133285341:C:T	rs2995327	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr10	133516111	133516112	chr10:133516112:C:T	rs2026047	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	233738	233739	chr11:233739:C:T	rs34700713	C	T	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	246233	246234	chr11:246234:A:G	rs10902114	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr11	270465	270466	chr11:270466:G:A	rs151178852	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	320804	320805	chr11:320805:G:T	rs1136853	G	T	G	Hoxc9_MA0485.1	12	1	-	7.643057128988846	6.7993209932404985	CACCATGAATCAC
chr11	320835	320836	chr11:320836:C:T	rs34481144	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr11	511515	511516	chr11:511516:C:T	rs59363309	C	T	C	Hoxc9_MA0485.1	4	1	-	7.465429137845894	8.633192851837478	GCCCGTGAATCAG
chr11	738301	738302	chr11:738302:C:T	rs558101808	C	T	C	Hoxc9_MA0485.1	1	1	-	9.996678408971151	8.437234835061089	GGCCATAAATAAA
chr11	863378	863379	chr11:863379:C:T	rs187647589	C	T	C	Hoxc9_MA0485.1	12	1	+	7.009469720182568	6.755472766418017	GGTCCTAAATCAC
chr11	957539	957540	chr11:957540:C:A	rs115709405	C	A	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr11	1336571	1336572	chr11:1336572:T:A	rs182548852	T	A	t	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr11	1339394	1339395	chr11:1339395:A:G	rs78491070	A	G	a	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	1543582	1543583	chr11:1543583:G:A	rs149098670	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr11	1564754	1564755	chr11:1564755:A:G	rs10768211	A	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	1649056	1649057	chr11:1649057:C:T	rs16926670	C	T	c	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	1662889	1662890	chr11:1662890:C:G	rs935422769	C	G	c	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	1808374	1808375	chr11:1808375:T:C	rs11603400	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	1808375	1808376	chr11:1808376:G:A	rs11600367	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	2075996	2075997	chr11:2075997:G:A	rs146146949	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	2143568	2143569	chr11:2143569:G:C	rs4366464	G	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	2152216	2152217	chr11:2152217:T:G	rs7924316	T	G	t	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	2409257	2409258	chr11:2409258:A:G	rs189919692	A	G	A	Hoxc9_MA0485.1	8	1	+	7.775603466628456	0.8736449564934973	GCCCATGAATCTG
chr11	2409366	2409367	chr11:2409367:G:A	rs800347	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	2436119	2436120	chr11:2436120:A:G	rs11022821	A	G	A	Hoxc9_MA0485.1	4	1	+	8.310004925607105	7.142241211615522	CCCAATAAATCCC
chr11	2575428	2575429	chr11:2575429:G:C	rs145738632	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	2702899	2702900	chr11:2702900:C:T	rs231840	C	T	C	Hoxc9_MA0485.1	3	1	+	8.409899338690252	7.521646565667628	TGCCGTCAATCAG
chr11	2746736	2746737	chr11:2746737:G:A	rs231899	G	A	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	3078155	3078156	chr11:3078156:C:T	rs7939078	C	T	-	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	3099050	3099051	chr11:3099051:A:C	rs7124388	A	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	3107714	3107715	chr11:3107715:G:A	rs58961916	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	3123441	3123442	chr11:3123442:T:C	rs10833283	T	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	3156283	3156284	chr11:3156284:C:T	rs78179526	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	3237291	3237292	chr11:3237292:C:G	rs11601864	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	3424697	3424698	chr11:3424698:T:C	rs1812031	T	C	-	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	3877502	3877503	chr11:3877503:C:G	rs117473136	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	3996169	3996170	chr11:3996170:C:T	rs114178422	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr11	4132000	4132001	chr11:4132001:T:C	rs4910889	T	C	T	Hoxc9_MA0485.1	0	1	+	9.519169031441836	9.286825373922467	TGGCATAAATCAT
chr11	4134809	4134810	chr11:4134810:T:A	rs4910599	T	A	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	4185620	4185621	chr11:4185621:A:G	rs114157880	A	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	4606870	4606871	chr11:4606871:A:C	rs759093929	A	C	A	Hoxc9_MA0485.1	3	1	+	9.97749848476682	10.71224969233729	AGCAGTAAATCTT
chr11	4699726	4699727	chr11:4699727:C:T	rs1565762	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	4887769	4887770	chr11:4887770:A:G	rs2595982	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr11	4922535	4922536	chr11:4922536:A:G	rs1023723	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	4978812	4978813	chr11:4978813:T:C	rs1455954	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	5004386	5004387	chr11:5004387:G:A	rs11822694	G	A	G	Hoxc9_MA0485.1	0	1	+	7.136588594392911	6.603773461101908	GGCAGCAAATCAC
chr11	5026349	5026350	chr11:5026350:T:C	rs2445246	T	C	C	Hoxc9_MA0485.1	7	1	-	7.055864992710872	0.15163592350529526	GGCTGTAAATCGC
chr11	5132030	5132031	chr11:5132031:A:G	rs2472530	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	5145256	5145257	chr11:5145257:C:T	rs2472524	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	5232355	5232356	chr11:5232356:G:A	rs74049332	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	5258124	5258125	chr11:5258125:C:A	rs5010981	C	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	5421145	5421146	chr11:5421146:G:C	rs61894107	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	5550873	5550874	chr11:5550874:G:A	rs1874828	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	5683900	5683901	chr11:5683901:C:A	rs6578675	C	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	5683914	5683915	chr11:5683915:C:G	rs6578676	C	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	5736831	5736832	chr11:5736832:T:C	rs7397032	T	C	t	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	5737866	5737867	chr11:5737867:C:A	rs78900468	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	5737866	5737867	chr11:5737867:C:T	chr11:5737867:C:T	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	5737867	5737868	chr11:5737868:G:A	rs7938089	G	A	g	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	5749104	5749105	chr11:5749105:A:G	rs2133267	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	6503634	6503635	chr11:6503635:C:T	rs11040901	C	T	c	Hoxc9_MA0485.1	10	1	+	7.261509837071716	5.457673932762964	AGGCATGAATCAC
chr11	6609178	6609179	chr11:6609179:T:C	rs11826498	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	6627705	6627706	chr11:6627706:C:T	rs11040937	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	6723130	6723131	chr11:6723131:G:A	rs7942521	G	A	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	6848187	6848188	chr11:6848188:C:T	rs2741796	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	6848188	6848189	chr11:6848189:G:A	rs2741795	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	6987755	6987756	chr11:6987756:A:G	rs2857907	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	7096569	7096570	chr11:7096570:G:C	rs10839720	G	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	7466223	7466224	chr11:7466224:C:T	rs182853472	C	T	C	Hoxc9_MA0485.1	6	1	+	7.58423371256369	6.228840542357154	ACTCATCAATCAG
chr11	7484294	7484295	chr11:7484295:C:T	rs4758189	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	8000262	8000263	chr11:8000263:A:C	rs7939213	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	8041871	8041872	chr11:8041872:A:G	rs1918849	A	G	A	Hoxc9_MA0485.1	9	1	-	7.110728043651377	0.22250222927774466	GGCCATGAATTTG
chr11	8227310	8227311	chr11:8227311:G:C	rs12287681	G	C	g	Hoxc9_MA0485.1	29	0	+	0	0	.
chr11	8295508	8295509	chr11:8295509:G:C	rs10743066	G	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr11	8295529	8295530	chr11:8295530:T:A	rs11041852	T	A	T	Hoxc9_MA0485.1	5	1	+	7.550697812413019	0.6521548366934242	GCCCATCAATTTC
chr11	8295542	8295543	chr11:8295543:C:T	rs71474980	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	8347399	8347400	chr11:8347400:T:C	rs4258369	T	C	T	Hoxc9_MA0485.1	8	1	-	8.030447581412867	1.1284890712779057	TGTTATCAATCAC
chr11	8383600	8383601	chr11:8383601:G:A	rs12790154	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	8594846	8594847	chr11:8594847:G:A	rs117426848	G	A	G	Hoxc9_MA0485.1	6	1	-	9.744775031324965	8.38938186111843	GGCTATCAATCAG
chr11	8606137	8606138	chr11:8606138:T:C	rs79230711	T	C	T	Hoxc9_MA0485.1	8	1	-	8.316809185915721	1.4148506757807624	GGACATGAATCAT
chr11	8611003	8611004	chr11:8611004:A:G	rs11822779	A	G	A	Hoxc9_MA0485.1	4	1	+	10.386289806351158	9.218526092359575	TTCCATAAATCAC
chr11	8928920	8928921	chr11:8928921:T:C	rs2568074	T	C	T	Hoxc9_MA0485.1	8	1	-	9.431680610858713	2.5297221007237516	GGACATCAATCAC
chr11	9026965	9026966	chr11:9026966:G:A	rs2056902	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	9093451	9093452	chr11:9093452:C:T	rs4910440	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	9289292	9289293	chr11:9289293:G:A	rs11042266	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	9375966	9375967	chr11:9375967:C:A	rs4465370	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr11	9375968	9375969	chr11:9375969:T:C	rs4362147	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr11	9568292	9568293	chr11:9568293:G:C	rs10840262	G	C	C	Hoxc9_MA0485.1	2	1	-	9.581455289056192	6.885571147334885	AGCTATAAATTAG
chr11	9591803	9591804	chr11:9591804:T:A	rs12416887	T	A	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	9956585	9956586	chr11:9956586:A:C	rs7103902	A	C	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr11	10038517	10038518	chr11:10038518:G:A	rs140978931	G	A	G	Hoxc9_MA0485.1	10	1	-	8.784417823871365	6.980581919562614	TGGAATAAATCAT
chr11	10164741	10164742	chr11:10164742:G:A	rs17293593	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	10310348	10310349	chr11:10310349:A:G	rs550518652	A	G	A	Hoxc9_MA0485.1	12	1	+	8.855963918751193	8.981644275584664	GATTATAAATCAA
chr11	10328990	10328991	chr11:10328991:G:A	rs7129220	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	10493489	10493490	chr11:10493490:G:A	rs75286033	G	A	A	Hoxc9_MA0485.1	3	1	-	6.355677300770858	5.467424527748235	GGCCGTCAAACAC
chr11	10565724	10565725	chr11:10565725:C:G	rs55657367	C	G	C	Hoxc9_MA0485.1	11	1	+	7.122806928232809	4.76326338426352	GGTCGTAAATTCC
chr11	10669858	10669859	chr11:10669859:G:C	rs735045	G	C	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	10669889	10669890	chr11:10669890:G:A	rs903824	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	10792065	10792066	chr11:10792066:T:G	rs7103582	T	G	T	Hoxc9_MA0485.1	11	1	-	9.218720247372987	7.1657303924739075	GACAGTAAATCAA
chr11	10822342	10822343	chr11:10822343:C:T	rs7115367	C	T	C	Hoxc9_MA0485.1	12	1	+	8.668664356078247	8.414667402313695	TCCCATAAATTTC
chr11	10843883	10843884	chr11:10843884:A:G	rs115907700	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	10864839	10864840	chr11:10864840:A:G	rs72858342	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	10993404	10993405	chr11:10993405:C:T	rs7941808	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	10993446	10993447	chr11:10993447:A:G	rs78578229	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr11	11152395	11152396	chr11:11152396:G:A	rs12573909	G	A	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr11	11210460	11210461	chr11:11210461:G:T	rs11043167	G	T	G	Hoxc9_MA0485.1	2	1	-	10.330174455784674	8.410771483380918	AGCCATAAATTTC
chr11	11294081	11294082	chr11:11294082:A:G	rs56062366	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	11420820	11420821	chr11:11420821:G:A	rs1487124	G	A	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	11478246	11478247	chr11:11478247:A:G	rs6484940	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	11587946	11587947	chr11:11587947:T:G	rs10831647	T	G	T	Hoxc9_MA0485.1	5	1	+	9.314052152091554	2.415509176371958	ACCAATAAATTAC
chr11	11809313	11809314	chr11:11809314:C:G	rs897364	C	G	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr11	11809550	11809551	chr11:11809551:A:G	rs12795665	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	11813548	11813549	chr11:11813549:G:A	rs189848015	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	11813573	11813574	chr11:11813574:C:T	rs186143272	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr11	11813755	11813756	chr11:11813756:G:C	rs906324487	G	C	G	Hoxc9_MA0485.1	0	1	+	8.157500823988505	6.869792414803384	GAGCATAAATCTT
chr11	11979080	11979081	chr11:11979081:G:A	rs16910272	G	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	11979110	11979111	chr11:11979111:G:C	rs2035934	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	12201799	12201800	chr11:12201800:G:A	rs72866056	G	A	G	Hoxc9_MA0485.1	1	1	+	7.892936405784671	6.333492831874611	GGCCATAAAATAC
chr11	12201810	12201811	chr11:12201811:C:T	rs901283	C	T	C	Hoxc9_MA0485.1	12	1	+	7.892936405784671	7.638939452020121	GGCCATAAAATAC
chr11	12220019	12220020	chr11:12220020:G:C	rs16910796	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	12281900	12281901	chr11:12281901:T:G	rs151099817	T	G	T	Hoxc9_MA0485.1	11	1	-	11.134583485055895	9.081593630156814	ACCCATAAATCAG
chr11	12287556	12287557	chr11:12287557:C:T	rs150630658	C	T	C	Hoxc9_MA0485.1	0	1	-	7.252281534940449	6.719466401649447	GGCCGTTAATCTG
chr11	12420704	12420705	chr11:12420705:T:C	rs1559843	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	12421049	12421050	chr11:12421050:G:A	rs10500757	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	12568203	12568204	chr11:12568204:A:G	rs7950684	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	12568232	12568233	chr11:12568233:C:T	rs7935994	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr11	12707047	12707048	chr11:12707048:C:G	rs7949728	C	G	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	13039465	13039466	chr11:13039466:C:T	rs138654835	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	13039482	13039483	chr11:13039483:T:C	rs4757096	T	C	T	Hoxc9_MA0485.1	11	1	-	10.81819981913414	6.405666420265772	AGACATAAATCAT
chr11	13083554	13083555	chr11:13083555:C:A	rs67675041	C	A	c	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	13271361	13271362	chr11:13271362:T:C	rs1384030	T	C	C	Hoxc9_MA0485.1	4	1	-	7.242788333337454	6.07502461934587	ACCCATGAATCTG
chr11	13385235	13385236	chr11:13385236:A:G	rs144199271	A	G	a	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	13388250	13388251	chr11:13388251:A:T	rs1044432	A	T	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	13746996	13746997	chr11:13746997:A:G	rs1214811	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	13873553	13873554	chr11:13873554:T:C	rs1020903597	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	13983376	13983377	chr11:13983377:T:C	rs139641385	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	14023226	14023227	chr11:14023227:G:A	rs113667147	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	14026310	14026311	chr11:14026311:A:G	rs10832161	A	G	A	Hoxc9_MA0485.1	4	1	+	9.208281032060263	8.04051731806868	TACCATAAATCTA
chr11	14077170	14077171	chr11:14077171:T:A	rs2697830	T	A	T	Hoxc9_MA0485.1	4	1	-	10.041721877832162	6.3731066355155646	TGCCATCAATCAT
chr11	14248889	14248890	chr11:14248890:A:C	rs190700435	A	C	A	Hoxc9_MA0485.1	11	1	+	8.575458805512973	6.522468950613893	CTCAATAAATCAA
chr11	14793686	14793687	chr11:14793687:A:G	rs10832302	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	15151507	15151508	chr11:15151508:T:C	rs34251262	T	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	15213946	15213947	chr11:15213947:C:G	rs7129739	C	G	C	Hoxc9_MA0485.1	10	1	+	7.565327765159954	2.7642569574126763	CGCCATAAAACAA
chr11	15472581	15472582	chr11:15472582:C:T	rs147042202	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	15561865	15561866	chr11:15561866:C:T	rs7126988	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr11	15631272	15631273	chr11:15631273:G:A	rs11023661	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	15985692	15985693	chr11:15985693:C:G	rs11023815	C	G	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	16217829	16217830	chr11:16217830:T:C	rs10766303	T	C	T	Hoxc9_MA0485.1	11	1	-	7.982037373932928	3.56950397506456	TGCAATGAATCAG
chr11	16217843	16217844	chr11:16217844:C:G	rs17538814	C	G	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr11	16228636	16228637	chr11:16228637:C:T	rs1401454	C	T	T	Hoxc9_MA0485.1	10	1	+	8.837388475789588	7.033552571480837	TGCTGTAAATCTG
chr11	16297309	16297310	chr11:16297310:C:T	rs10832590	C	T	C	Hoxc9_MA0485.1	12	1	+	8.582453902042406	8.328456948277854	TTCCATAAATTAC
chr11	16361572	16361573	chr11:16361573:A:T	rs11023928	A	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	16608745	16608746	chr11:16608746:A:T	rs10741703	A	T	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr11	16738572	16738573	chr11:16738573:T:C	rs747104422	T	C	T	Hoxc9_MA0485.1	0	1	+	7.982037373932928	7.749693716413561	TGCAATGAATCAG
chr11	16891586	16891587	chr11:16891587:A:T	rs61475718	A	T	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	16935983	16935984	chr11:16935984:A:G	rs17773188	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	17005750	17005751	chr11:17005751:G:A	rs34819854	G	A	G	Hoxc9_MA0485.1	2	1	+	8.63091625841921	9.407397427736766	TGGTATAAATCAT
chr11	17015984	17015985	chr11:17015985:G:A	rs187037561	G	A	G	Hoxc9_MA0485.1	3	1	-	8.438702571350161	7.550449798327539	TCCCATCAATCAG
chr11	17591228	17591229	chr11:17591229:C:T	rs720459	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	17988173	17988174	chr11:17988174:C:T	rs2137777	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	18495369	18495370	chr11:18495370:A:G	rs2132302	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	18635210	18635211	chr11:18635211:G:A	rs77324643	G	A	G	Hoxc9_MA0485.1	10	1	-	7.354476203675009	5.550640299366258	TGCTATCAATCCC
chr11	18851989	18851990	chr11:18851990:C:T	rs4322371	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	19225103	19225104	chr11:19225104:T:G	rs793275	T	G	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	19316481	19316482	chr11:19316482:C:T	rs10734274	C	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	19573915	19573916	chr11:19573916:T:A	rs1487203	T	A	T	Hoxc9_MA0485.1	7	1	-	7.961047792476095	2.7651965835595194	GCCAGTAAATTAG
chr11	19573933	19573934	chr11:19573934:G:A	rs548666679	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr11	19740628	19740629	chr11:19740629:A:G	rs10766586	A	G	A	Hoxc9_MA0485.1	1	1	-	8.148735117954834	9.0925349571997	ATCAGTAAATCTC
chr11	19813442	19813443	chr11:19813443:A:G	rs10766596	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	19910530	19910531	chr11:19910531:G:T	rs7928556	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	19955958	19955959	chr11:19955959:G:A	rs117795526	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	20047715	20047716	chr11:20047716:A:G	rs77126536	A	G	A	Hoxc9_MA0485.1	9	1	-	8.213152666033588	1.3249268516599564	GACAATCAATCAA
chr11	20460101	20460102	chr11:20460102:T:C	rs17232653	T	C	t	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	20546494	20546495	chr11:20546495:T:C	rs7480002	T	C	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	20627857	20627858	chr11:20627858:G:A	rs3819252	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	21028413	21028414	chr11:21028414:C:A	rs16907292	C	A	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	21263104	21263105	chr11:21263105:A:C	rs1791825	A	C	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr11	21493275	21493276	chr11:21493276:C:T	rs75758207	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	21616805	21616806	chr11:21616806:T:C	rs7944006	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	21825156	21825157	chr11:21825157:G:A	rs1894058	G	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr11	22009019	22009020	chr11:22009020:T:C	rs10734310	T	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	22459162	22459163	chr11:22459163:C:T	rs7924828	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	22471295	22471296	chr11:22471296:C:T	rs75510551	C	T	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr11	22497602	22497603	chr11:22497603:G:T	rs73477579	G	T	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	22509077	22509078	chr11:22509078:G:C	rs7942692	G	C	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr11	22834792	22834793	chr11:22834793:A:G	rs35699552	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	22901143	22901144	chr11:22901144:A:G	rs1019215	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	23056989	23056990	chr11:23056990:A:C	rs2433488	A	C	C	Hoxc9_MA0485.1	8	1	+	9.320386486660695	4.469984314716034	AATAATAAATCAC
chr11	23124083	23124084	chr11:23124084:A:T	rs971536	A	T	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr11	23295577	23295578	chr11:23295578:T:C	rs1384475	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	23413214	23413215	chr11:23413215:T:C	rs141509230	T	C	t	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	23590578	23590579	chr11:23590579:A:C	rs11027387	A	C	A	Hoxc9_MA0485.1	9	1	-	8.597513837061893	1.7092880226882599	AGTCATCAATCAA
chr11	23992699	23992700	chr11:23992700:A:T	rs897869641	A	T	A	Hoxc9_MA0485.1	5	1	-	8.061110969226467	1.1625679935068716	TGTCATCAATCTC
chr11	24203132	24203133	chr11:24203133:A:G	rs12293729	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr11	24234619	24234620	chr11:24234620:C:G	rs2068454	C	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr11	24415504	24415505	chr11:24415505:G:A	rs56037957	G	A	g	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	24585374	24585375	chr11:24585375:G:T	rs10742044	G	T	G	Hoxc9_MA0485.1	0	1	+	8.234363654171467	7.178998902505714	GCTTGTAAATCAG
chr11	24867818	24867819	chr11:24867819:T:C	rs11605315	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	24872154	24872155	chr11:24872155:A:G	rs16913446	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	25559612	25559613	chr11:25559613:C:T	rs7120522	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	26119796	26119797	chr11:26119797:A:C	rs147779759	A	C	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	26119804	26119805	chr11:26119805:A:T	rs141111944	A	T	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	26234933	26234934	chr11:26234934:G:A	rs12161776	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	26297504	26297505	chr11:26297505:C:T	rs16915437	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	26326933	26326934	chr11:26326934:T:A	rs11827865	T	A	A	Hoxc9_MA0485.1	2	1	+	9.429948576781735	8.887564081539203	GCTAATAAATCAA
chr11	26665351	26665352	chr11:26665352:A:C	rs17309342	A	C	A	Hoxc9_MA0485.1	9	1	-	8.522930717906014	1.6347049035323813	CTTCATAAATCAT
chr11	26960104	26960105	chr11:26960105:G:C	rs72874716	G	C	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	27022929	27022930	chr11:27022930:G:A	rs9971528	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr11	27031851	27031852	chr11:27031852:C:T	rs4923412	C	T	C	Hoxc9_MA0485.1	1	1	-	8.454357592615036	6.894914018704977	GGCCATCAATCCA
chr11	27147897	27147898	chr11:27147898:C:T	rs1020272	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	27190993	27190994	chr11:27190994:A:C	rs7395215	A	C	A	Hoxc9_MA0485.1	1	1	+	8.143953451118414	8.564436543696802	AACCATGAATCAT
chr11	27202068	27202069	chr11:27202069:G:A	rs10835127	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	27202072	27202073	chr11:27202073:T:C	rs6484272	T	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	27242284	27242285	chr11:27242285:C:G	rs11604730	C	G	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	27613577	27613578	chr11:27613578:C:T	rs550481637	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	27626823	27626824	chr11:27626824:A:T	rs36029218	A	T	A	Hoxc9_MA0485.1	12	1	-	7.685264545313772	7.095525363329975	GGCAATAACTCAT
chr11	27718363	27718364	chr11:27718364:G:T	rs75707145	G	T	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr11	27718401	27718402	chr11:27718402:C:T	rs10835215	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	28269030	28269031	chr11:28269031:T:C	rs17571754	T	C	T	Hoxc9_MA0485.1	12	1	+	10.46276217940252	10.716759133167072	GGATATAAATCAT
chr11	28537793	28537794	chr11:28537794:A:G	rs11030368	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	28742215	28742216	chr11:28742216:C:T	rs17657172	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	28820761	28820762	chr11:28820762:G:A	rs117805911	G	A	G	Hoxc9_MA0485.1	0	1	+	8.175952667036091	7.64313753374509	GCCAGTAAATCCT
chr11	28859503	28859504	chr11:28859504:A:T	chr11:28859504:A:T	A	T	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	28872745	28872746	chr11:28872746:A:G	rs7950534	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	29315634	29315635	chr11:29315635:T:C	rs7942993	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	30169689	30169690	chr11:30169690:G:T	rs7128357	G	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr11	30368584	30368585	chr11:30368585:A:G	rs594937	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr11	30423132	30423133	chr11:30423133:G:C	rs485083	G	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	30730609	30730610	chr11:30730610:G:T	rs10835706	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	30741114	30741115	chr11:30741115:C:T	rs625653	C	T	T	Hoxc9_MA0485.1	10	1	+	10.527701808155921	8.72386590384717	AGCTATAAATCTG
chr11	30758330	30758331	chr11:30758331:A:G	rs138181837	A	G	A	Hoxc9_MA0485.1	3	1	+	8.28835162936192	3.5067063649466994	TCCAATAAATCCT
chr11	30846818	30846819	chr11:30846819:G:A	rs273554	G	A	A	Hoxc9_MA0485.1	12	1	+	8.840509002212139	8.714828645378669	AGTTGTAAATCAG
chr11	31787773	31787774	chr11:31787774:C:T	rs12421026	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	31794622	31794623	chr11:31794623:C:G	chr11:31794623:C:G	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr11	31804057	31804058	chr11:31804058:G:T	rs73477677	G	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	32210657	32210658	chr11:32210658:G:A	rs10767923	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	32508962	32508963	chr11:32508963:A:G	rs16923363	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	32631050	32631051	chr11:32631051:T:C	rs12284205	T	C	T	Hoxc9_MA0485.1	12	1	+	9.80114074046661	10.055137694231163	AATCATAAATCAT
chr11	32752281	32752282	chr11:32752282:T:C	rs150456427	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	32892270	32892271	chr11:32892271:G:A	rs116106856	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	33692807	33692808	chr11:33692808:A:G	rs189090915	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	33724255	33724256	chr11:33724256:T:C	rs563609750	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	33776144	33776145	chr11:33776145:G:A	rs4756002	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	33778986	33778987	chr11:33778987:A:T	rs11032380	A	T	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	33779020	33779021	chr11:33779021:G:A	rs565212450	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr11	33862111	33862112	chr11:33862112:G:A	rs879414	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr11	33876729	33876730	chr11:33876730:A:G	rs10768033	A	G	A	Hoxc9_MA0485.1	3	1	+	8.139206956270108	3.3575616918548863	TGCAGTCAATCAT
chr11	34020922	34020923	chr11:34020923:G:A	rs12272859	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr11	34226266	34226267	chr11:34226267:C:T	rs4756117	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr11	34342066	34342067	chr11:34342067:C:T	rs74841780	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	34411352	34411353	chr11:34411353:G:A	rs11032669	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	34426038	34426039	chr11:34426039:T:G	rs11032695	T	G	T	Hoxc9_MA0485.1	1	1	-	9.049549061401061	9.47003215397945	GACCATAAATTTT
chr11	34442324	34442325	chr11:34442325:G:A	rs17881482	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr11	34442327	34442328	chr11:34442328:T:C	rs7120960	T	C	t	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr11	34583887	34583888	chr11:34583888:T:G	rs5028798	T	G	G	Hoxc9_MA0485.1	5	1	+	9.920091263390889	3.0215482876712936	ATCAATAAATCAT
chr11	34788462	34788463	chr11:34788463:G:A	rs10742326	G	A	-	Hoxc9_MA0485.1	12	1	+	7.785875821252406	7.660195464418936	CACCATCAATCAG
chr11	34860672	34860673	chr11:34860673:G:A	rs2941057	G	A	G	Hoxc9_MA0485.1	12	1	-	8.156106614916586	7.902109661152035	GCCTGTCAATCAC
chr11	34866453	34866454	chr11:34866454:T:G	rs200664864	T	G	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	35089744	35089745	chr11:35089745:T:C	rs11032995	T	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	35102480	35102481	chr11:35102481:A:G	rs77717342	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	35102492	35102493	chr11:35102493:T:C	rs4756190	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	35134952	35134953	chr11:35134953:T:G	rs353560	T	G	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	35165858	35165859	chr11:35165859:T:A	rs35796444	T	A	T	Hoxc9_MA0485.1	5	1	+	8.100377718546476	1.2018347428268794	ACCCATGAATCAG
chr11	35182799	35182800	chr11:35182800:G:A	rs77673209	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr11	35220089	35220090	chr11:35220090:C:G	rs10836342	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	35348789	35348790	chr11:35348790:G:A	rs59377579	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	35407795	35407796	chr11:35407796:G:A	rs76987231	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	35536120	35536121	chr11:35536121:C:T	rs632358	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	35568200	35568201	chr11:35568201:G:A	rs116422040	G	A	G	Hoxc9_MA0485.1	10	1	-	9.105658385198124	7.301822480889374	GGTAATAAATCCT
chr11	35593305	35593306	chr11:35593306:C:T	rs1914298	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	35605812	35605813	chr11:35605813:T:C	rs4755418	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr11	35616122	35616123	chr11:35616123:C:T	rs12418696	C	T	C	Hoxc9_MA0485.1	3	1	+	8.320221041054074	7.43196826803145	AGCCATAAAACAA
chr11	35812935	35812936	chr11:35812936:G:A	rs56693720	G	A	.	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	36069160	36069161	chr11:36069161:A:G	rs59795791	A	G	A	Hoxc9_MA0485.1	4	1	+	10.076177502020121	8.908413788028538	AGCCATAAATTTT
chr11	36272284	36272285	chr11:36272285:C:G	rs3812767	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	36357981	36357982	chr11:36357982:A:G	rs7129794	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	36431299	36431300	chr11:36431300:G:A	rs751926	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	36620279	36620280	chr11:36620280:C:G	rs16929170	C	G	C	Hoxc9_MA0485.1	12	1	-	9.058905670681442	9.776961449596321	TGCTATAAATTAG
chr11	36941828	36941829	chr11:36941829:A:G	rs10836641	A	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	37026828	37026829	chr11:37026829:T:C	rs10836663	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	37088192	37088193	chr11:37088193:C:T	rs568275022	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	37088295	37088296	chr11:37088296:A:G	rs145735567	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	37203985	37203986	chr11:37203986:A:G	rs72951398	A	G	a	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	37633619	37633620	chr11:37633620:A:G	rs1461888	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	37633661	37633662	chr11:37633662:T:C	rs11034300	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr11	37869517	37869518	chr11:37869518:C:G	rs149033211	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr11	38417515	38417516	chr11:38417516:C:G	rs12362288	C	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	38554263	38554264	chr11:38554264:C:G	rs79837559	C	G	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	39092661	39092662	chr11:39092662:G:A	rs10837114	G	A	G	Hoxc9_MA0485.1	1	1	+	8.812427840545922	7.252984266635862	GGAAATAAATTAT
chr11	39154773	39154774	chr11:39154774:A:T	rs12577145	A	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	39247906	39247907	chr11:39247907:T:C	rs1021645	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	39288470	39288471	chr11:39288471:A:G	rs7124898	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	39679264	39679265	chr11:39679265:G:C	rs1477860	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	40290384	40290385	chr11:40290385:A:G	rs77383812	A	G	a	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	40356067	40356068	chr11:40356068:T:C	rs34034994	T	C	T	Hoxc9_MA0485.1	11	1	-	12.385454397261777	7.972920998393406	GCCCATAAATCAC
chr11	41081922	41081923	chr11:41081923:A:G	rs11036220	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr11	41499332	41499333	chr11:41499333:G:A	rs7114220	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	41533130	41533131	chr11:41533131:C:T	rs10837668	C	T	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr11	41727435	41727436	chr11:41727436:T:C	rs1902501	T	C	T	Hoxc9_MA0485.1	8	1	-	10.622712580383652	3.720754070248695	TGCAATAAATCTT
chr11	41785082	41785083	chr11:41785083:C:T	chr11:41785083:C:T	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr11	41999236	41999237	chr11:41999237:A:G	rs145966239	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	42539236	42539237	chr11:42539237:A:T	rs7940910	A	T	A	Hoxc9_MA0485.1	7	1	+	9.757565007894673	4.561713798978098	ACTCATAAATCAG
chr11	42602004	42602005	chr11:42602005:C:A	rs11036958	C	A	c	Hoxc9_MA0485.1	12	1	+	12.666825493384426	11.823089357636077	GGCCATAAATCTC
chr11	42863602	42863603	chr11:42863603:T:C	rs10768895	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	42958024	42958025	chr11:42958025:C:T	rs35151277	C	T	c	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	42974983	42974984	chr11:42974984:A:G	rs73523401	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	43378733	43378734	chr11:43378734:C:T	rs17508618	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr11	44064136	44064137	chr11:44064137:C:A	rs7127924	C	A	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	44225179	44225180	chr11:44225180:C:A	rs7109486	C	A	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	44326905	44326906	chr11:44326906:C:T	rs77288696	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	44374986	44374987	chr11:44374987:T:C	rs1158267	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	44386326	44386327	chr11:44386327:G:T	rs78458520	G	T	G	Hoxc9_MA0485.1	3	1	-	9.009271329189934	8.274520121619465	TTTCATAAATCAC
chr11	44419419	44419420	chr11:44419420:C:T	rs7936636	C	T	c	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	44548425	44548426	chr11:44548426:T:A	rs111310659	T	A	T	Hoxc9_MA0485.1	11	1	-	8.633192851837478	7.775603466628456	GCCCATGAATCAG
chr11	44635597	44635598	chr11:44635598:C:G	rs57250710	C	G	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	44796363	44796364	chr11:44796364:G:T	rs75806076	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	44850186	44850187	chr11:44850187:C:T	rs835796	C	T	N	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	44850227	44850228	chr11:44850228:A:G	rs835797	A	G	a	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	44894477	44894478	chr11:44894478:G:C	rs190100454	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	44928511	44928512	chr11:44928512:C:T	rs114613401	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	44956562	44956563	chr11:44956563:G:C	rs58928063	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	45366945	45366946	chr11:45366946:G:C	rs2242043	G	C	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	45385942	45385943	chr11:45385943:A:G	rs7928480	A	G	A	Hoxc9_MA0485.1	6	1	+	8.561757253196852	5.527551486687431	AGCTATAAATATC
chr11	45768705	45768706	chr11:45768706:A:G	rs79269877	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	45825403	45825404	chr11:45825404:C:T	rs77031894	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	45918918	45918919	chr11:45918919:C:G	chr11:45918919:C:G	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	46191859	46191860	chr11:46191860:G:A	rs12808446	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr11	46741266	46741267	chr11:46741267:G:A	rs61884324	G	A	g	Hoxc9_MA0485.1	6	1	+	7.9013774917788195	10.93558325828824	AGCTGTGAATCAC
chr11	47052927	47052928	chr11:47052928:T:C	rs7127741	T	C	C	Hoxc9_MA0485.1	4	1	-	8.364632799725616	7.196869085734034	GGGTATAAATCTG
chr11	47395194	47395195	chr11:47395195:C:T	rs1377416	C	T	C	Hoxc9_MA0485.1	10	1	+	7.4659682427393	5.662132338430548	ACCCTTAAATCAG
chr11	47651917	47651918	chr11:47651918:T:A	rs61897975	T	A	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	47860187	47860188	chr11:47860188:A:G	rs7929725	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	47934570	47934571	chr11:47934571:T:G	rs912710466	T	G	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	47934590	47934591	chr11:47934591:G:C	chr11:47934591:G:C	G	C	G	Hoxc9_MA0485.1	2	1	-	8.604928724070973	5.9090445823496625	AGCCTTAAATCAG
chr11	47947005	47947006	chr11:47947006:A:G	rs117506841	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	47966718	47966719	chr11:47966719:G:A	rs997009196	G	A	G	Hoxc9_MA0485.1	12	1	+	8.288268724248978	8.162588367415507	ATCAGTAAATCAG
chr11	48088395	48088396	chr11:48088396:A:G	rs2904315	A	G	A	Hoxc9_MA0485.1	11	1	+	10.411217268854392	5.998683869986023	TGCCATAAATTAT
chr11	48110997	48110998	chr11:48110998:C:T	rs113006324	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	49269051	49269052	chr11:49269052:C:G	rs1164688	C	G	g	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	50298361	50298362	chr11:50298362:C:T	rs1327420982	C	T	c	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	54627853	54627854	chr11:54627854:G:T	rs4881761	G	T	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	55442814	55442815	chr11:55442815:C:T	rs55667318	C	T	c	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	56597930	56597931	chr11:56597931:G:C	rs11228672	G	C	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	56842389	56842390	chr11:56842390:T:C	rs764858	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	56843210	56843211	chr11:56843211:C:T	rs7105581	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	56847601	56847602	chr11:56847602:A:G	rs17640103	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	56916664	56916665	chr11:56916665:G:A	rs75871661	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	57289377	57289378	chr11:57289378:C:T	rs11605053	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	57289417	57289418	chr11:57289418:C:T	rs558345051	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	57289418	57289419	chr11:57289419:G:A	rs10896599	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	57385741	57385742	chr11:57385742:C:G	rs943689444	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	57402402	57402403	chr11:57402403:A:T	rs77699414	A	T	T	Hoxc9_MA0485.1	7	1	+	7.388260117911161	2.192408908994585	AGTCATCAATCCC
chr11	57499838	57499839	chr11:57499839:C:A	rs2584856	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	57741105	57741106	chr11:57741106:A:G	rs151107141	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	58063977	58063978	chr11:58063978:A:C	rs67305834	A	C	A	Hoxc9_MA0485.1	6	1	+	10.147557289436028	7.974225994105047	GGTTATAAATCTT
chr11	58337717	58337718	chr11:58337718:C:A	rs73484144	C	A	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	58532880	58532881	chr11:58532881:T:C	rs2515353	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	58573010	58573011	chr11:58573011:C:T	rs7110210	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	59097070	59097071	chr11:59097071:T:A	rs11229800	T	A	t	Hoxc9_MA0485.1	11	1	+	7.537545470798905	8.395134856007926	GGTCATGAATCTG
chr11	59147240	59147241	chr11:59147241:T:G	rs79167356	T	G	T	Hoxc9_MA0485.1	1	1	-	7.367199258631501	7.787682351209888	GATCGTAAATCCC
chr11	59281311	59281312	chr11:59281312:C:T	rs35470396	C	T	C	Hoxc9_MA0485.1	4	1	-	9.573289211005616	10.741052924997199	ACCCGTAAATCTT
chr11	59365324	59365325	chr11:59365325:G:C	rs7941190	G	C	G	Hoxc9_MA0485.1	10	1	-	8.53240354862983	3.7313327408825527	AACTGTAAATCAA
chr11	59398048	59398049	chr11:59398049:C:T	rs10896968	C	T	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr11	59551143	59551144	chr11:59551144:C:T	rs73484843	C	T	.	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr11	59716219	59716220	chr11:59716220:A:C	rs518427	A	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	59754677	59754678	chr11:59754678:G:A	rs533166	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	59756619	59756620	chr11:59756620:C:T	rs76068108	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	60332889	60332890	chr11:60332890:T:G	rs2868120	T	G	G	Hoxc9_MA0485.1	5	1	+	7.683806067440467	0.7852630917208713	CCGCATAAATCAG
chr11	60477102	60477103	chr11:60477103:A:G	chr11:60477103:A:G	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	60915664	60915665	chr11:60915665:C:T	rs78748308	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	60915682	60915683	chr11:60915683:G:A	chr11:60915683:G:A	G	A	G	Hoxc9_MA0485.1	12	1	-	8.546591587395653	8.2925946336311	TGCTATGAATCAC
chr11	61113193	61113194	chr11:61113194:A:T	rs7932247	A	T	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	61183821	61183822	chr11:61183822:A:G	rs4939503	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	61678879	61678880	chr11:61678880:A:G	rs4963304	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	61830815	61830816	chr11:61830816:C:T	rs174572	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	61860338	61860339	chr11:61860339:T:C	rs174609	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	61860360	61860361	chr11:61860361:A:G	rs174610	A	G	G	Hoxc9_MA0485.1	9	1	-	7.552445552634791	0.6642197382611585	GCATGTAAATCTC
chr11	61954245	61954246	chr11:61954246:C:T	rs78054615	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	62080803	62080804	chr11:62080804:A:C	rs12420131	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr11	62185382	62185383	chr11:62185383:G:A	rs7940224	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	62189597	62189598	chr11:62189598:G:A	rs2232931	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	62431762	62431763	chr11:62431763:A:G	rs183017820	A	G	A	Hoxc9_MA0485.1	4	1	+	9.056820170944613	7.889056456953029	GAAAATAAATCAT
chr11	62431786	62431787	chr11:62431787:C:T	chr11:62431787:C:T	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	62480002	62480003	chr11:62480003:G:A	rs626828	G	A	G	Hoxc9_MA0485.1	11	1	-	7.670791238759442	8.866191708449499	TCCTATAAATCCG
chr11	62574772	62574773	chr11:62574773:C:T	chr11:62574773:C:T	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	62994949	62994950	chr11:62994950:C:T	rs953894	C	T	T	Hoxc9_MA0485.1	4	1	-	7.776793047077738	8.944556761069322	ACCAGTCAATCAC
chr11	63036052	63036053	chr11:63036053:G:C	rs1944037	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	63099726	63099727	chr11:63099727:C:T	rs10897349	C	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	63479126	63479127	chr11:63479127:G:A	rs187923748	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	63495221	63495222	chr11:63495222:T:C	rs9971506	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	63583754	63583755	chr11:63583755:T:C	rs188786140	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	64130898	64130899	chr11:64130899:T:C	rs76523632	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr11	64164667	64164668	chr11:64164668:G:A	rs11607903	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	64269398	64269399	chr11:64269399:G:A	rs562915973	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	64406778	64406779	chr11:64406779:T:G	rs111870490	T	G	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr11	64492480	64492481	chr11:64492481:A:C	rs1794120	A	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	64492485	64492486	chr11:64492486:A:G	rs1783813	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	64762889	64762890	chr11:64762890:A:G	rs3759052	A	G	A	Hoxc9_MA0485.1	5	1	-	8.388196439024743	3.9028850763862564	AGACATAAATAAC
chr11	64778992	64778993	chr11:64778993:C:T	rs73494232	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	64779019	64779020	chr11:64779020:A:G	rs575793877	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	64862345	64862346	chr11:64862346:C:T	rs4930281	C	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	65871902	65871903	chr11:65871903:C:T	rs2234458	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	66139062	66139063	chr11:66139063:A:G	rs535395	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	66146360	66146361	chr11:66146361:A:T	rs10896085	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	66269092	66269093	chr11:66269093:C:T	rs117827012	C	T	c	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	66372321	66372322	chr11:66372322:A:T	rs374661012	A	T	-	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	66678328	66678329	chr11:66678329:A:G	chr11:66678329:A:G	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	66882125	66882126	chr11:66882126:T:G	rs76693359	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	67600501	67600502	chr11:67600502:G:A	rs982953824	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	67620023	67620024	chr11:67620024:T:A	rs12801378	T	A	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	67654466	67654467	chr11:67654467:A:G	rs11828473	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr11	67702044	67702045	chr11:67702045:A:G	rs7929286	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	67774334	67774335	chr11:67774335:A:T	rs60353355	A	T	-	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr11	68413197	68413198	chr11:68413198:C:T	rs72934434	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	68413205	68413206	chr11:68413206:G:A	rs181355434	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	68442140	68442141	chr11:68442141:G:A	rs76311938	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	68467353	68467354	chr11:68467354:T:C	rs73516848	T	C	T	Hoxc9_MA0485.1	3	1	-	7.2139607993301675	2.4323155349149457	GGTAGTCAATCTC
chr11	68737438	68737439	chr11:68737439:C:T	rs7103131	C	T	C	Hoxc9_MA0485.1	4	1	-	7.746800233968547	8.914563947960128	GGCCGTGAATCTG
chr11	68745777	68745778	chr11:68745778:A:G	rs10791994	A	G	G	Hoxc9_MA0485.1	4	1	+	8.437234835061089	7.269471121069507	GACCATAAATAAA
chr11	68903243	68903244	chr11:68903244:G:A	rs603076	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr11	69061460	69061461	chr11:69061461:G:A	rs896978	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	69061480	69061481	chr11:69061481:C:T	rs72919428	C	T	C	Hoxc9_MA0485.1	0	1	-	7.298517229707564	6.76570209641656	GCCTGTCAATCTC
chr11	69455463	69455464	chr11:69455464:C:T	rs74664822	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	69564419	69564420	chr11:69564420:G:A	rs2046493	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	69583303	69583304	chr11:69583304:G:A	rs75445226	G	A	G	Hoxc9_MA0485.1	0	1	+	11.792425969822476	11.259610836531474	GGCTATAAATCAA
chr11	69583327	69583328	chr11:69583328:T:A	rs77516128	T	A	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	69639367	69639368	chr11:69639368:A:T	rs36225069	A	T	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	69639378	69639379	chr11:69639379:G:A	rs1030518817	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	69836601	69836602	chr11:69836602:G:T	rs10752572	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	69845012	69845013	chr11:69845013:T:C	rs73525644	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	69986610	69986611	chr11:69986611:T:C	rs1492513	T	C	C	Hoxc9_MA0485.1	0	1	-	8.340895698787527	8.87371083207853	ACAAATAAATCTC
chr11	70093495	70093496	chr11:70093496:C:T	rs117987680	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	70122817	70122818	chr11:70122818:C:T	rs75375906	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	70255919	70255920	chr11:70255920:T:G	rs1260606166	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	70291617	70291618	chr11:70291618:C:T	chr11:70291618:C:T	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	70335278	70335279	chr11:70335279:C:T	rs73517173	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	70407479	70407480	chr11:70407480:T:C	rs569732	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	70606889	70606890	chr11:70606890:G:A	rs948191	G	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr11	70862301	70862302	chr11:70862302:T:C	rs76907029	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	71153299	71153300	chr11:71153300:G:A	rs191621131	G	A	-	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr11	71379841	71379842	chr11:71379842:T:C	rs1792259	T	C	T	Hoxc9_MA0485.1	1	1	-	7.9310118381878665	9.490455412097928	CACAGTAAATCAA
chr11	71383185	71383186	chr11:71383186:G:A	rs1660839	G	A	g	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	71383199	71383200	chr11:71383200:C:T	rs1660840	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	71448528	71448529	chr11:71448529:T:G	rs1026182896	T	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	71489273	71489274	chr11:71489274:T:C	rs949178	T	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	71568984	71568985	chr11:71568985:C:A	rs111626347	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	71569004	71569005	chr11:71569005:C:T	rs559984723	C	T	C	Hoxc9_MA0485.1	3	1	+	8.789630264801444	7.9013774917788195	AGCCGTGAATCAC
chr11	71569005	71569006	chr11:71569006:G:A	rs150828882	G	A	G	Hoxc9_MA0485.1	4	1	+	8.789630264801444	9.957393978793029	AGCCGTGAATCAC
chr11	71579623	71579624	chr11:71579624:C:G	rs2015464	C	G	c	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	71579642	71579643	chr11:71579643:G:A	rs141497880	G	A	G	Hoxc9_MA0485.1	3	1	-	8.789630264801444	7.9013774917788195	AGCCGTGAATCAC
chr11	71580692	71580693	chr11:71580693:T:C	rs117066300	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	71775573	71775574	chr11:71775574:T:C	rs10898562	T	C	t	Hoxc9_MA0485.1	9	1	+	10.622712580383652	3.734486766010022	TGCAATAAATCTT
chr11	71785330	71785331	chr11:71785331:T:G	rs9666153	T	G	g	Hoxc9_MA0485.1	1	1	-	8.280966018858532	8.701449111436919	GATCATAAATCCT
chr11	72123451	72123452	chr11:72123452:A:G	rs60401386	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	72431307	72431308	chr11:72431308:G:A	rs7129526	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	72679594	72679595	chr11:72679595:A:G	rs341053	A	G	A	Hoxc9_MA0485.1	11	1	+	10.541087849494724	6.128554450626356	GGTTATAAATCAG
chr11	72722052	72722053	chr11:72722053:A:C	rs1552224	A	C	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	73141872	73141873	chr11:73141873:T:C	rs764999746	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	73976018	73976019	chr11:73976019:A:G	rs45605931	A	G	A	Hoxc9_MA0485.1	8	1	+	9.462875279764932	2.56091676962997	AGCCATTAATCAC
chr11	74001506	74001507	chr11:74001507:G:A	rs8179179	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	74071263	74071264	chr11:74071264:A:G	rs826038	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	74091790	74091791	chr11:74091791:T:C	rs117334924	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr11	74325707	74325708	chr11:74325708:C:T	rs634243	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	74325742	74325743	chr11:74325743:G:A	chr11:74325743:G:A	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	74382946	74382947	chr11:74382947:C:T	rs10898983	C	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	74752366	74752367	chr11:74752367:C:T	rs3132908	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	74818986	74818987	chr11:74818987:G:T	rs487666	G	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	75247902	75247903	chr11:75247903:G:T	rs1783472	G	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	75256852	75256853	chr11:75256853:G:A	rs150139125	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	75264617	75264618	chr11:75264618:G:A	rs2282600	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	75385018	75385019	chr11:75385019:C:T	rs676703	C	T	T	Hoxc9_MA0485.1	4	1	-	9.31858979585609	10.486353509847673	TCCCGTAAATCAA
chr11	75715256	75715257	chr11:75715257:T:C	rs80020106	T	C	T	Hoxc9_MA0485.1	5	1	+	8.857717927639479	4.372406565000994	GCCCATAAATAAA
chr11	75796188	75796189	chr11:75796189:A:C	rs12222542	A	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	75939875	75939876	chr11:75939876:A:G	rs12785513	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	76121270	76121271	chr11:76121271:T:C	rs628957	T	C	T	Hoxc9_MA0485.1	8	1	-	9.773165985206388	2.8712074750714267	TGGCATAAATCAC
chr11	76493336	76493337	chr11:76493337:G:A	rs7940390	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	76608292	76608293	chr11:76608293:C:T	rs151224530	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	76614065	76614066	chr11:76614066:A:G	rs58547072	A	G	G	Hoxc9_MA0485.1	7	1	+	7.079554277417257	0.17532520821167885	GGGCATCAATCTG
chr11	76636089	76636090	chr11:76636090:G:A	rs117930687	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	76636122	76636123	chr11:76636123:G:T	rs11600548	G	T	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	76642551	76642552	chr11:76642552:C:T	rs562038750	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	76709481	76709482	chr11:76709482:T:G	rs4619182	T	G	G	Hoxc9_MA0485.1	6	1	-	11.18765760425236	9.014326308921376	GTCCATAAATCAT
chr11	76709501	76709502	chr11:76709502:G:A	rs4261306	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	76731828	76731829	chr11:76731829:A:G	rs7936177	A	G	A	Hoxc9_MA0485.1	2	1	+	8.030721370004967	7.25424020068741	ACAAGTAAATCAC
chr11	76731855	76731856	chr11:76731856:C:G	rs7950053	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr11	76742989	76742990	chr11:76742990:T:C	rs7936685	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	77004257	77004258	chr11:77004258:G:A	rs7105694	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	77029503	77029504	chr11:77029504:A:C	rs7123723	A	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	77037137	77037138	chr11:77037138:A:G	rs1894008	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	77037154	77037155	chr11:77037155:G:A	rs11237061	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	77715049	77715050	chr11:77715050:G:A	rs501153	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	78022342	78022343	chr11:78022343:A:C	rs35414616	A	C	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr11	78063552	78063553	chr11:78063553:T:C	rs2282639	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	78079606	78079607	chr11:78079607:T:C	rs534418	T	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	78079608	78079609	chr11:78079609:G:C	rs8875	G	C	G	Hoxc9_MA0485.1	0	1	+	8.367756554163742	7.08004814497862	GGTTATCAATCAG
chr11	78079988	78079989	chr11:78079989:T:C	rs111749341	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	78142433	78142434	chr11:78142434:C:T	rs617700	C	T	C	Hoxc9_MA0485.1	4	1	-	8.789630264801444	9.957393978793029	AGCCGTGAATCAC
chr11	78172431	78172432	chr11:78172432:G:A	rs527462	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	78225017	78225018	chr11:78225018:A:C	rs1385601	A	C	C	Hoxc9_MA0485.1	8	1	+	8.95178883510377	4.101386663159111	CGCCATCAATCTT
chr11	78380103	78380104	chr11:78380104:C:A	rs2373115	C	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	78649123	78649124	chr11:78649124:C:T	rs1792134	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	78809058	78809059	chr11:78809059:C:T	rs144108770	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	78809256	78809257	chr11:78809257:C:T	rs76769454	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr11	79090245	79090246	chr11:79090246:G:A	rs7127492	G	A	G	Hoxc9_MA0485.1	12	1	+	8.026311174937504	7.900630818104035	GGCTATGAATCTG
chr11	79277193	79277194	chr11:79277194:C:T	rs115002180	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	79670775	79670776	chr11:79670776:A:G	rs6592863	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	80122242	80122243	chr11:80122243:A:G	rs1528632	A	G	A	Hoxc9_MA0485.1	11	1	+	8.1003534171991	3.687820018330731	GCTAATCAATCAC
chr11	80414547	80414548	chr11:80414548:C:A	rs2448281	C	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	80520571	80520572	chr11:80520572:G:C	rs115298435	G	C	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	80580982	80580983	chr11:80580983:T:C	rs7942871	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	80586942	80586943	chr11:80586943:C:A	rs12361601	C	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	80838420	80838421	chr11:80838421:G:A	rs11232361	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	81208607	81208608	chr11:81208608:G:C	rs61888606	G	C	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	81232029	81232030	chr11:81232030:C:A	rs4463867	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	81542106	81542107	chr11:81542107:A:G	rs1945685	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	81542113	81542114	chr11:81542114:A:G	rs1945684	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	82083138	82083139	chr11:82083139:C:T	rs528772965	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	82867415	82867416	chr11:82867416:G:A	rs140910710	G	A	g	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	82989367	82989368	chr11:82989368:C:T	rs3793985	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	83156735	83156736	chr11:83156736:G:A	rs545462543	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	83256570	83256571	chr11:83256571:C:T	rs630855	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	83544240	83544241	chr11:83544241:T:C	rs116983205	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	83602089	83602090	chr11:83602090:T:C	rs611766	T	C	C	Hoxc9_MA0485.1	12	1	+	9.83978257553712	10.093779529301672	GGGAATAAATCAT
chr11	83607053	83607054	chr11:83607054:G:C	rs114806906	G	C	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr11	83722968	83722969	chr11:83722969:A:C	rs7948906	A	C	A	Hoxc9_MA0485.1	5	1	-	9.996678408971151	3.098135433251558	GGCCATAAATAAA
chr11	83729547	83729548	chr11:83729548:T:G	rs11233734	T	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	83786184	83786185	chr11:83786185:T:C	rs12796763	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	83896749	83896750	chr11:83896750:T:C	rs708239	T	C	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	83917707	83917708	chr11:83917708:G:A	rs790363	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr11	83964504	83964505	chr11:83964505:C:A	rs1384758	C	A	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	84015880	84015881	chr11:84015881:A:G	rs10898189	A	G	A	Hoxc9_MA0485.1	3	1	-	8.903318605492458	9.791571378515082	GAATATAAATCAT
chr11	84563341	84563342	chr11:84563342:G:T	rs948142	G	T	T	Hoxc9_MA0485.1	0	1	-	8.757859923094513	9.512753198988632	CAACATAAATCAC
chr11	85755824	85755825	chr11:85755825:G:A	rs17148431	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	85965522	85965523	chr11:85965523:T:G	rs17744938	T	G	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	86015774	86015775	chr11:86015775:T:C	rs648270	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr11	86042308	86042309	chr11:86042309:C:T	rs17745248	C	T	c	Hoxc9_MA0485.1	1	1	-	9.76824372159718	8.20880014768712	AGTAATAAATCTT
chr11	86053394	86053395	chr11:86053395:T:A	rs9804530	T	A	T	Hoxc9_MA0485.1	9	1	+	8.246414976330655	4.418772407830632	GTCTATAAATCCT
chr11	86172260	86172261	chr11:86172261:C:T	rs7949297	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	86441038	86441039	chr11:86441039:G:A	rs116465009	G	A	G	Hoxc9_MA0485.1	10	1	-	7.903431705854868	6.0995958015461165	AACCATTAATCAC
chr11	86486836	86486837	chr11:86486837:G:A	rs11234666	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	86607420	86607421	chr11:86607421:C:T	rs567842127	C	T	C	Hoxc9_MA0485.1	0	1	-	8.883900560146527	8.351085426855525	GGCTATGAATCAG
chr11	86667010	86667011	chr11:86667011:G:A	rs622933	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	86891422	86891423	chr11:86891423:A:G	rs12225381	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr11	86891431	86891432	chr11:86891432:T:A	rs72959672	T	A	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr11	86917811	86917812	chr11:86917812:A:T	rs17758621	A	T	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr11	86952777	86952778	chr11:86952778:A:T	rs76149367	A	T	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	86984857	86984858	chr11:86984858:A:T	rs17758742	A	T	A	Hoxc9_MA0485.1	8	1	+	8.24652121307199	1.3445627029370324	AGCTATAAATTCC
chr11	86995497	86995498	chr11:86995498:T:C	rs557466331	T	C	t	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	87108670	87108671	chr11:87108671:G:A	rs2445551	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	87115920	87115921	chr11:87115921:G:A	rs2512496	G	A	A	Hoxc9_MA0485.1	1	1	-	8.734062516087048	7.790262676842185	GCATATAAATCAA
chr11	87176455	87176456	chr11:87176456:C:A	rs476642	C	A	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	87305231	87305232	chr11:87305232:A:T	rs75499880	A	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	87810722	87810723	chr11:87810723:C:T	rs1939206	C	T	C	Hoxc9_MA0485.1	1	1	+	9.364034447835976	8.42023460859111	ACTCATAAATCTT
chr11	87840294	87840295	chr11:87840295:T:C	rs2508481	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	88013572	88013573	chr11:88013573:C:T	rs75302502	C	T	C	Hoxc9_MA0485.1	2	1	-	7.878682644462054	8.655163813779609	AAGCATAAATCTC
chr11	88310555	88310556	chr11:88310556:T:C	rs588374	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	88620723	88620724	chr11:88620724:A:G	rs12785879	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	89633451	89633452	chr11:89633452:T:C	rs10830303	T	C	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	89725299	89725300	chr11:89725300:A:G	rs10830363	A	G	.	Hoxc9_MA0485.1	12	1	+	9.70966564924594	9.83534600607941	GTCTATAAATCAA
chr11	90184897	90184898	chr11:90184898:A:G	rs72956882	A	G	A	Hoxc9_MA0485.1	5	1	-	8.667582292087827	4.1822709294493405	GTCTGTAAATCAG
chr11	90563176	90563177	chr11:90563177:G:A	rs10830539	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	90699668	90699669	chr11:90699669:G:T	rs1792609	G	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	90740760	90740761	chr11:90740761:A:G	rs17262804	A	G	A	Hoxc9_MA0485.1	5	1	-	9.531820947564686	5.046509584926199	ATTCATAAATCAC
chr11	90908304	90908305	chr11:90908305:C:T	rs1917501	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	91081057	91081058	chr11:91081058:A:C	rs10501749	A	C	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	91101206	91101207	chr11:91101207:C:A	rs12792024	C	A	C	Hoxc9_MA0485.1	1	1	-	8.250836250739505	6.168075930162969	GGCTATAAATATA
chr11	91163673	91163674	chr11:91163674:A:G	rs138033327	A	G	A	Hoxc9_MA0485.1	3	1	-	10.187839918808848	11.07609269183147	TCCTATAAATCAT
chr11	91985116	91985117	chr11:91985117:A:G	rs17494494	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	92101757	92101758	chr11:92101758:A:G	rs16916990	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	92162917	92162918	chr11:92162918:T:G	chr11:92162918:T:G	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	92180689	92180690	chr11:92180690:C:T	rs12286345	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	92180723	92180724	chr11:92180724:C:T	rs12286391	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	92298091	92298092	chr11:92298092:G:C	rs1202381	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	92470161	92470162	chr11:92470162:A:C	rs115479958	A	C	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	92500422	92500423	chr11:92500423:C:A	rs648386	C	A	C	Hoxc9_MA0485.1	0	1	-	7.543613102567583	6.48824835090183	GGGCATCAATCTT
chr11	92533962	92533963	chr11:92533963:G:A	rs4753063	G	A	G	Hoxc9_MA0485.1	0	1	+	9.48597111191445	8.95315597862345	GGTCATAAATTTC
chr11	92740171	92740172	chr11:92740172:G:T	rs2676166	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	92747727	92747728	chr11:92747728:T:C	rs2634180	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	92794803	92794804	chr11:92794804:C:G	rs10501797	C	G	C	Hoxc9_MA0485.1	10	1	+	9.084922302718777	4.283851494971499	CACAATAAATCTC
chr11	92803386	92803387	chr11:92803387:A:G	rs3912649	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	92862504	92862505	chr11:92862505:G:A	rs3912662	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	92920593	92920594	chr11:92920594:T:C	rs7130688	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	93020453	93020454	chr11:93020454:T:C	rs117841438	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	93206111	93206112	chr11:93206112:T:G	rs7936931	T	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	93250072	93250073	chr11:93250073:C:T	rs76451710	C	T	c	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	93267707	93267708	chr11:93267708:C:A	rs116910554	C	A	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr11	93624715	93624716	chr11:93624716:T:G	rs12279634	T	G	T	Hoxc9_MA0485.1	0	1	-	8.055129341819361	7.300236065925241	AGACATCAATCAA
chr11	93668241	93668242	chr11:93668242:C:G	rs7925086	C	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr11	94287146	94287147	chr11:94287147:A:C	rs12281327	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	94630553	94630554	chr11:94630554:C:T	rs628715	C	T	.	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	94648086	94648087	chr11:94648087:C:A	rs4567415	C	A	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr11	94657015	94657016	chr11:94657016:G:A	rs115902819	G	A	G	Hoxc9_MA0485.1	2	1	-	9.98615964910308	8.609141171941856	CCCCATAAATCTT
chr11	94673976	94673977	chr11:94673977:G:A	rs526060	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	94877411	94877412	chr11:94877412:G:C	rs498376	G	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	95245323	95245324	chr11:95245324:G:A	rs114759418	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	95359280	95359281	chr11:95359281:C:G	chr11:95359281:C:G	C	G	c	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	95514730	95514731	chr11:95514731:C:A	rs145773880	C	A	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr11	95515338	95515339	chr11:95515339:T:C	rs16922043	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	95964055	95964056	chr11:95964056:A:G	rs7938725	A	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	96028981	96028982	chr11:96028982:G:A	rs10734173	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr11	96091596	96091597	chr11:96091597:T:C	rs7108260	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	96197360	96197361	chr11:96197361:A:C	rs480544	A	C	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr11	96204989	96204990	chr11:96204990:A:G	rs4753191	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	96242465	96242466	chr11:96242466:G:A	rs561122	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	96242760	96242761	chr11:96242761:G:T	rs544656	G	T	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr11	96905295	96905296	chr11:96905296:A:G	rs34639466	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	96907369	96907370	chr11:96907370:T:C	rs2198343	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	96942263	96942264	chr11:96942264:G:T	rs635343	G	T	t	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	97345355	97345356	chr11:97345356:T:A	rs7927318	T	A	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	97558954	97558955	chr11:97558955:C:T	rs112667044	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	97646247	97646248	chr11:97646248:T:C	rs11212078	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	97757314	97757315	chr11:97757315:A:G	rs7926840	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	97904786	97904787	chr11:97904787:G:T	rs10789741	G	T	G	Hoxc9_MA0485.1	1	1	-	8.39209235795752	7.971609265379134	TCCCATAAATAAT
chr11	98053858	98053859	chr11:98053859:A:G	rs681858	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	98061463	98061464	chr11:98061464:A:G	rs11213844	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	99098757	99098758	chr11:99098758:A:C	rs17565290	A	C	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	99165161	99165162	chr11:99165162:G:A	rs7949592	G	A	G	Hoxc9_MA0485.1	1	1	+	8.515734750294119	6.956291176384058	GGTTGTAAATCTG
chr11	100005918	100005919	chr11:100005919:A:G	rs7113025	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	100190644	100190645	chr11:100190645:G:A	rs1002122	G	A	g	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	100235324	100235325	chr11:100235325:A:T	rs34730425	A	T	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	100328719	100328720	chr11:100328720:T:C	rs1442444	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	100445845	100445846	chr11:100445846:T:C	rs189659256	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	100445887	100445888	chr11:100445888:G:C	rs187064364	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	100769445	100769446	chr11:100769446:A:G	rs78598508	A	G	A	Hoxc9_MA0485.1	8	1	+	8.857717927639479	1.955759417504521	GCCCATAAATAAA
chr11	100855669	100855670	chr11:100855670:A:G	rs17095689	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	100877223	100877224	chr11:100877224:A:G	rs61890819	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	100906188	100906189	chr11:100906189:C:T	rs623600	C	T	C	Hoxc9_MA0485.1	2	1	-	9.250043393553323	10.026524562870877	GGGAATAAATCAA
chr11	100919041	100919042	chr11:100919042:A:C	rs1940220	A	C	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	100926161	100926162	chr11:100926162:G:C	rs79357798	G	C	G	Hoxc9_MA0485.1	3	1	-	10.761275770441346	5.244879298455657	GGACATAAATCAA
chr11	101115865	101115866	chr11:101115866:T:C	rs471715	T	C	T	Hoxc9_MA0485.1	1	1	+	10.299404831229737	11.2432046704746	GTCTATAAATCAT
chr11	101178615	101178616	chr11:101178616:T:C	rs1942836	T	C	T	Hoxc9_MA0485.1	12	1	-	8.080678556997324	8.206358913830794	CCCCATCAATCAA
chr11	101354675	101354676	chr11:101354676:T:C	rs4754751	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	102141853	102141854	chr11:102141854:G:C	rs78710279	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	102230409	102230410	chr11:102230410:A:T	chr11:102230410:A:T	A	T	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	102322845	102322846	chr11:102322846:T:C	rs17879998	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	102391512	102391513	chr11:102391513:G:T	rs11827872	G	T	g	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	102490021	102490022	chr11:102490022:C:T	rs2186992	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr11	102761885	102761886	chr11:102761886:A:G	rs56095949	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	102869629	102869630	chr11:102869630:G:A	chr11:102869630:G:A	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	102994271	102994272	chr11:102994272:T:C	rs10502011	T	C	t	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr11	103184549	103184550	chr11:103184550:A:T	rs17374401	A	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	103249698	103249699	chr11:103249699:C:T	rs11225628	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	103432553	103432554	chr11:103432554:C:T	rs505677	C	T	C	Hoxc9_MA0485.1	4	1	-	10.261576908525763	11.429340622517346	GGTCGTAAATCAG
chr11	103432557	103432558	chr11:103432558:C:T	rs505672	C	T	C	Hoxc9_MA0485.1	0	1	-	10.261576908525763	9.728761775234762	GGTCGTAAATCAG
chr11	103454256	103454257	chr11:103454257:G:C	rs313877	G	C	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr11	103525236	103525237	chr11:103525237:A:G	rs191098132	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	103652089	103652090	chr11:103652090:A:G	rs72978795	A	G	A	Hoxc9_MA0485.1	5	1	-	10.502994929167649	6.017683566529165	AGTCATAAATCTT
chr11	103793151	103793152	chr11:103793152:T:G	rs140273216	T	G	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	103870961	103870962	chr11:103870962:G:A	rs73600055	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	103947666	103947667	chr11:103947667:T:C	rs35045740	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	104096599	104096600	chr11:104096600:T:C	rs7951754	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	104153317	104153318	chr11:104153318:A:C	rs4403779	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr11	104232098	104232099	chr11:104232099:C:A	rs12789167	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	104232134	104232135	chr11:104232135:G:A	rs10791679	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	104247355	104247356	chr11:104247356:G:A	rs17336260	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	104694813	104694814	chr11:104694814:T:A	rs139993181	T	A	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	104701343	104701344	chr11:104701344:G:C	rs1944525	G	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	105023087	105023088	chr11:105023088:C:A	rs114585661	C	A	.	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	105073499	105073500	chr11:105073500:G:T	rs470237	G	T	.	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	105230776	105230777	chr11:105230777:T:C	rs17104030	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	105332166	105332167	chr11:105332167:G:A	rs76347863	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	105455879	105455880	chr11:105455880:C:T	rs61900581	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	105508037	105508038	chr11:105508038:T:C	rs72986164	T	C	T	Hoxc9_MA0485.1	5	1	+	12.737602791537896	8.252291428899412	AGCCATAAATCAT
chr11	105542536	105542537	chr11:105542537:G:C	rs2513258	G	C	g	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	105613933	105613934	chr11:105613934:C:A	rs7931946	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	106177887	106177888	chr11:106177888:A:G	rs7112436	A	G	A	Hoxc9_MA0485.1	9	1	-	8.055129341819361	1.1669035274457285	AGACATCAATCAA
chr11	106203483	106203484	chr11:106203484:G:A	rs116903540	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	106211850	106211851	chr11:106211851:C:T	rs1396153	C	T	t	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr11	106287137	106287138	chr11:106287138:G:A	rs61900918	G	A	G	Hoxc9_MA0485.1	4	1	+	7.298517229707564	8.466280943699148	GCCTGTCAATCTC
chr11	106425303	106425304	chr11:106425304:T:A	rs2458345	T	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	106462678	106462679	chr11:106462679:G:A	rs2511416	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	106553280	106553281	chr11:106553281:C:T	rs7935510	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	106990750	106990751	chr11:106990751:A:T	rs2445099	A	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr11	107565578	107565579	chr11:107565579:G:A	rs142208363	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr11	107593209	107593210	chr11:107593210:T:G	rs11212292	T	G	G	Hoxc9_MA0485.1	5	1	+	8.453227739500143	1.5546847637805463	GAAAATAAATCTC
chr11	107774735	107774736	chr11:107774736:A:G	rs12792230	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	107780882	107780883	chr11:107780883:T:C	rs1680249	T	C	T	Hoxc9_MA0485.1	8	1	-	8.430337022833466	1.5283785126985074	TCCTGTAAATCAA
chr11	107840739	107840740	chr11:107840740:C:G	rs12270291	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	107921448	107921449	chr11:107921449:A:T	rs190154679	A	T	A	Hoxc9_MA0485.1	1	1	+	8.442655033128021	7.919338286461543	CATCATAAATCTC
chr11	107970267	107970268	chr11:107970268:A:G	rs2089175	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	108221696	108221697	chr11:108221697:G:A	rs190491586	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	108249711	108249712	chr11:108249712:G:A	rs599164	G	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	108364387	108364388	chr11:108364388:C:A	rs3092993	C	A	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	108571242	108571243	chr11:108571243:G:C	rs73550537	G	C	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr11	108571255	108571256	chr11:108571256:A:C	rs17693972	A	C	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr11	108594071	108594072	chr11:108594072:C:G	rs11212727	C	G	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	108718651	108718652	chr11:108718652:G:A	rs11212763	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	108751666	108751667	chr11:108751667:G:A	rs1975910	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	108751695	108751696	chr11:108751696:C:T	rs1975911	C	T	C	Hoxc9_MA0485.1	1	1	-	9.56929750416514	8.00985393025508	TGCTGTAAATCAA
chr11	108983880	108983881	chr11:108983881:C:T	rs10890916	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	109112896	109112897	chr11:109112897:C:T	rs73000683	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	109236973	109236974	chr11:109236974:C:T	rs4753865	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	109383345	109383346	chr11:109383346:G:C	rs138439250	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	109734246	109734247	chr11:109734247:G:C	rs10891009	G	C	C	Hoxc9_MA0485.1	1	1	-	8.939033391747545	10.077993873079217	ACCTGTAAATCTC
chr11	109864474	109864475	chr11:109864475:C:A	rs147188128	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	109993823	109993824	chr11:109993824:C:T	rs10891043	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	110425878	110425879	chr11:110425879:G:A	rs11213396	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	110425889	110425890	chr11:110425890:A:C	rs80171271	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	110506065	110506066	chr11:110506066:C:A	rs7942703	C	A	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	110713738	110713739	chr11:110713739:G:A	rs59323966	G	A	G	Hoxc9_MA0485.1	2	1	+	8.268502349226841	9.044983518544395	ACGTATAAATCAC
chr11	110763421	110763422	chr11:110763422:G:A	rs889889	G	A	A	Hoxc9_MA0485.1	1	1	+	8.720070439457237	7.160626865547177	AGGCATAAATCTG
chr11	110782668	110782669	chr11:110782669:C:T	rs67647007	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	110801123	110801124	chr11:110801124:G:A	rs226094	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	110808360	110808361	chr11:110808361:G:A	rs77940886	G	A	G	Hoxc9_MA0485.1	4	1	+	6.815975050297626	7.983738764289211	TGCCGCAAATCAC
chr11	110963257	110963258	chr11:110963258:G:A	rs11213677	G	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	111106849	111106850	chr11:111106850:A:C	rs224770	A	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr11	111206316	111206317	chr11:111206317:G:A	rs7110958	G	A	A	Hoxc9_MA0485.1	10	1	-	9.066389532896142	7.2625536285873915	AATAATAAATCAT
chr11	111457219	111457220	chr11:111457220:A:G	rs7121944	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	111459994	111459995	chr11:111459995:A:G	rs73553252	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	111480458	111480459	chr11:111480459:T:C	rs1944117	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	111607995	111607996	chr11:111607996:A:T	rs12362685	A	T	A	Hoxc9_MA0485.1	2	1	-	11.303660265683876	10.761275770441346	GGTCATAAATCAA
chr11	111635302	111635303	chr11:111635303:G:A	rs11213962	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	111635349	111635350	chr11:111635350:A:C	rs1282996911	A	C	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	111715280	111715281	chr11:111715281:C:T	rs112249900	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	111921056	111921057	chr11:111921057:T:C	rs11214043	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	112123492	112123493	chr11:112123493:G:A	rs77203424	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	112175163	112175164	chr11:112175164:A:G	rs112351737	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	112177327	112177328	chr11:112177328:C:T	rs7121554	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	112221541	112221542	chr11:112221542:T:C	rs143934028	T	C	t	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	112290422	112290423	chr11:112290423:T:C	chr11:112290423:T:C	T	C	T	Hoxc9_MA0485.1	8	1	-	7.751395106769842	0.8494365966348829	CGCCACAAATCAC
chr11	112422260	112422261	chr11:112422261:G:A	rs1540072	G	A	G	Hoxc9_MA0485.1	3	1	-	7.865754685637148	6.977501912614525	GGCCATAAATGTC
chr11	112576745	112576746	chr11:112576746:T:G	rs10082586	T	G	G	Hoxc9_MA0485.1	12	1	+	9.958126148166242	9.494067323015916	GCCCATCAATCAT
chr11	112677170	112677171	chr11:112677171:T:A	rs2125734	T	A	T	Hoxc9_MA0485.1	11	1	-	8.842908617095791	7.985319231886769	AGGAATAAATCAG
chr11	112932174	112932175	chr11:112932175:T:C	rs11214422	T	C	C	Hoxc9_MA0485.1	4	1	-	9.251408441532611	8.083644727541028	CCCAATAAATCTT
chr11	113100822	113100823	chr11:113100823:C:T	rs11214488	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	113389613	113389614	chr11:113389614:C:T	rs11823773	C	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	113663818	113663819	chr11:113663819:T:C	rs61905028	T	C	C	Hoxc9_MA0485.1	0	1	-	8.180809698652832	8.713624831943834	AGACATCAATCAG
chr11	113731127	113731128	chr11:113731128:G:T	rs7927569	G	T	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr11	113774494	113774495	chr11:113774495:G:A	rs1000559	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	113899632	113899633	chr11:113899633:G:A	rs1176758	G	A	A	Hoxc9_MA0485.1	1	1	-	7.897134487509641	6.953334648264776	ACCAGTAAATCCC
chr11	114142445	114142446	chr11:114142446:C:T	rs61004552	C	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr11	114142473	114142474	chr11:114142474:A:T	rs181548991	A	T	A	Hoxc9_MA0485.1	3	1	-	10.209493215054032	10.362994780506186	CCCTATAAATCAC
chr11	114168143	114168144	chr11:114168144:C:T	rs672849	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr11	114204900	114204901	chr11:114204901:G:C	rs1022605736	G	C	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	114651479	114651480	chr11:114651480:G:C	rs61906459	G	C	G	Hoxc9_MA0485.1	10	1	-	10.622712580383652	5.821641772636376	TGCAATAAATCTT
chr11	114713977	114713978	chr11:114713978:T:C	rs1792428	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	114978277	114978278	chr11:114978278:A:G	rs4573711	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr11	115291655	115291656	chr11:115291656:T:C	rs11215467	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr11	115324936	115324937	chr11:115324937:C:T	rs78494977	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	115528619	115528620	chr11:115528620:T:C	rs693245	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	115617021	115617022	chr11:115617022:C:T	rs2846895	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	115617024	115617025	chr11:115617025:A:G	rs924530539	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr11	115791345	115791346	chr11:115791346:A:G	rs4938219	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	115944707	115944708	chr11:115944708:T:C	rs138106378	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	116134452	116134453	chr11:116134453:T:C	rs576425	T	C	T	Hoxc9_MA0485.1	5	1	+	8.42510661762642	3.9397952549879345	GCCAGTAAATTAT
chr11	116223199	116223200	chr11:116223200:C:T	rs1348011	C	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr11	116366978	116366979	chr11:116366979:G:A	rs79733808	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	116387844	116387845	chr11:116387845:T:A	rs142975267	T	A	t	Hoxc9_MA0485.1	7	1	-	11.002523195369818	5.806671986453247	GGCCATAAATTAG
chr11	116566642	116566643	chr11:116566643:A:C	rs57192657	A	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	116635378	116635379	chr11:116635379:G:A	rs987046663	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	116657826	116657827	chr11:116657827:C:T	rs74444640	C	T	C	Hoxc9_MA0485.1	3	1	+	8.282246312227892	7.393993539205267	AGCCGTAAATATC
chr11	116727531	116727532	chr11:116727532:T:C	rs10892023	T	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	116842869	116842870	chr11:116842870:C:T	rs140501596	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	116842913	116842914	chr11:116842914:C:G	rs579163	C	G	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr11	116852454	116852455	chr11:116852455:T:C	rs583219	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	116959544	116959545	chr11:116959545:T:C	rs7120963	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr11	117077609	117077610	chr11:117077610:G:A	rs150169767	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	117478685	117478686	chr11:117478686:A:G	rs56057635	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr11	117483096	117483097	chr11:117483097:C:T	rs55900121	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	117530576	117530577	chr11:117530577:C:A	rs57434987	C	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr11	117539043	117539044	chr11:117539044:T:C	rs142414349	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	117719606	117719607	chr11:117719607:G:T	rs7106419	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	117744080	117744081	chr11:117744081:T:C	rs869005	T	C	T	Hoxc9_MA0485.1	12	1	+	10.625833106806203	10.879830060570756	AGTAATAAATCAT
chr11	117814504	117814505	chr11:117814505:G:C	rs10892177	G	C	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr11	117814989	117814990	chr11:117814990:C:T	rs2282503	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr11	117885932	117885933	chr11:117885933:C:T	rs76730773	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	117885937	117885938	chr11:117885938:C:A	chr11:117885938:C:A	C	A	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	117885937	117885938	chr11:117885938:C:T	rs182432248	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	117903678	117903679	chr11:117903679:A:G	rs59590191	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	117927182	117927183	chr11:117927183:A:G	rs34850032	A	G	a	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	118047246	118047247	chr11:118047247:T:C	rs659092	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	118141594	118141595	chr11:118141595:G:A	rs11216781	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	118566368	118566369	chr11:118566369:A:C	rs112787374	A	C	A	Hoxc9_MA0485.1	6	1	+	10.199015679658674	8.025684384327691	AGCAATAAATTAT
chr11	118566378	118566379	chr11:118566379:T:C	rs115951984	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	118672853	118672854	chr11:118672854:C:T	rs10892251	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr11	118672879	118672880	chr11:118672880:C:G	rs72999499	C	G	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr11	118688468	118688469	chr11:118688469:T:C	rs486462	T	C	t	Hoxc9_MA0485.1	4	1	-	10.622712580383652	9.454948866392069	TGCAATAAATCTT
chr11	119051595	119051596	chr11:119051596:C:G	rs781945134	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr11	119557108	119557109	chr11:119557109:A:G	chr11:119557109:A:G	A	G	A	Hoxc9_MA0485.1	12	1	+	8.70525928342714	8.83093964026061	GGATGTAAATCAA
chr11	119886231	119886232	chr11:119886232:G:C	rs11217554	G	C	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr11	119974736	119974737	chr11:119974737:G:A	rs80159023	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	119974744	119974745	chr11:119974745:A:G	rs11606412	A	G	A	Hoxc9_MA0485.1	4	1	+	9.075646906357997	7.907883192366412	ACACATAAATCTC
chr11	120023042	120023043	chr11:120023043:G:C	rs10502233	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	120097116	120097117	chr11:120097117:G:A	rs61897959	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	120779118	120779119	chr11:120779119:T:C	rs17124317	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	120925245	120925246	chr11:120925246:A:C	rs117508216	A	C	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr11	121240748	121240749	chr11:121240749:C:A	rs948381	C	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	121245928	121245929	chr11:121245929:A:G	rs7129292	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr11	121268856	121268857	chr11:121268857:T:C	rs10790426	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	121458670	121458671	chr11:121458671:C:T	rs79308088	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	121514804	121514805	chr11:121514805:A:G	rs141310066	A	G	A	Hoxc9_MA0485.1	6	1	+	9.131641117238154	6.097435350728731	GTCTGTAAATCAT
chr11	121577628	121577629	chr11:121577629:G:A	rs3781836	G	A	g	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	121964855	121964856	chr11:121964856:A:G	chr11:121964856:A:G	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	122009075	122009076	chr11:122009076:C:T	rs67570480	C	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	122096190	122096191	chr11:122096191:T:A	rs186293189	T	A	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr11	122341186	122341187	chr11:122341187:T:C	rs79915723	T	C	T	Hoxc9_MA0485.1	1	1	+	8.922386354068513	9.866186193313377	GTTTATAAATCAT
chr11	122514219	122514220	chr11:122514220:C:T	rs11218652	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	122580890	122580891	chr11:122580891:A:T	rs1893999	A	T	a	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	122601123	122601124	chr11:122601124:C:T	rs1815953	C	T	T	Hoxc9_MA0485.1	12	1	+	8.797069739994217	8.543072786229665	ATTAATAAATCAC
chr11	122738241	122738242	chr11:122738242:T:C	rs7111632	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr11	122738242	122738243	chr11:122738243:G:A	rs7126129	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	122862163	122862164	chr11:122862164:G:T	rs2177196	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr11	123064701	123064702	chr11:123064702:T:C	rs73017811	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	123112219	123112220	chr11:123112220:A:G	rs4936777	A	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	123134905	123134906	chr11:123134906:C:T	rs12287633	C	T	C	Hoxc9_MA0485.1	11	1	+	8.195305659119041	9.3907061288091	TGTCATAAATCCA
chr11	123173274	123173275	chr11:123173275:T:C	rs189783172	T	C	T	Hoxc9_MA0485.1	4	1	-	8.445901397887544	7.278137683895962	AGCCATAAAACAG
chr11	123206510	123206511	chr11:123206511:T:A	rs471973	T	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr11	123231523	123231524	chr11:123231524:T:G	rs73616405	T	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr11	123231557	123231558	chr11:123231558:T:G	rs116441589	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr11	123522137	123522138	chr11:123522138:G:A	rs61123830	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	123524747	123524748	chr11:123524748:G:C	rs4936821	G	C	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr11	123567409	123567410	chr11:123567410:A:C	rs850293	A	C	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr11	123693002	123693003	chr11:123693003:T:C	rs1074339	T	C	C	Hoxc9_MA0485.1	5	1	+	8.967009228084123	4.481697865445638	AGTCATAAATTAA
chr11	123695888	123695889	chr11:123695889:C:G	rs11219240	C	G	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	123777886	123777887	chr11:123777887:C:T	rs7130648	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr11	123822595	123822596	chr11:123822596:A:G	rs144110860	A	G	A	Hoxc9_MA0485.1	11	1	+	10.228460637150343	5.815927238281975	AGACATAAATCAA
chr11	123822602	123822603	chr11:123822603:G:A	rs78082664	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	123926306	123926307	chr11:123926307:A:T	rs12226080	A	T	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	124170237	124170238	chr11:124170238:T:C	rs2512258	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	124172938	124172939	chr11:124172939:T:A	rs2508880	T	A	A	Hoxc9_MA0485.1	4	1	-	8.765209964235058	5.096594721918463	AGACATAAATCCT
chr11	124203159	124203160	chr11:124203160:A:G	rs10893160	A	G	a	Hoxc9_MA0485.1	8	1	+	8.842911845111367	1.940953334976407	TGCAATCAATCAG
chr11	124302668	124302669	chr11:124302669:C:T	rs10893205	C	T	.	Hoxc9_MA0485.1	17	0	+	0	0	.
chr11	124311652	124311653	chr11:124311653:G:A	rs4936920	G	A	.	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	124405417	124405418	chr11:124405418:C:G	rs561369	C	G	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr11	124405451	124405452	chr11:124405452:C:T	rs560678	C	T	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr11	124518540	124518541	chr11:124518541:G:A	rs10893239	G	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr11	125190502	125190503	chr11:125190503:G:C	rs77928709	G	C	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr11	125308542	125308543	chr11:125308543:T:C	rs111710977	T	C	T	Hoxc9_MA0485.1	4	1	-	8.781635278072102	7.61387156408052	TGTAATAAATCTG
chr11	125345726	125345727	chr11:125345727:T:A	chr11:125345727:T:A	T	A	T	Hoxc9_MA0485.1	4	1	-	9.522964495831769	5.854349253515173	TGCTATAAATTAT
chr11	125389705	125389706	chr11:125389706:C:T	rs79181720	C	T	C	Hoxc9_MA0485.1	0	1	-	10.499634904355315	9.966819771064312	GCCCGTAAATCAG
chr11	125433666	125433667	chr11:125433667:G:T	rs114105666	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr11	126086430	126086431	chr11:126086431:C:T	rs11220344	C	T	C	Hoxc9_MA0485.1	2	1	+	8.31302221451669	6.936003737355468	TCCCATCAATCAA
chr11	126086440	126086441	chr11:126086441:A:C	rs4937086	A	C	C	Hoxc9_MA0485.1	12	1	+	8.31302221451669	9.15675835026504	TCCCATCAATCAA
chr11	126194152	126194153	chr11:126194153:G:A	rs12422037	G	A	G	Hoxc9_MA0485.1	12	1	-	7.946082120023874	7.692085166259323	CGTTGTAAATCTC
chr11	126211507	126211508	chr11:126211508:T:C	rs2282580	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr11	126511831	126511832	chr11:126511832:G:C	rs6590215	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr11	126620785	126620786	chr11:126620786:A:G	rs116843648	A	G	A	Hoxc9_MA0485.1	8	1	+	8.964323007099777	2.062364496964818	TCTAATAAATCAT
chr11	126629434	126629435	chr11:126629435:A:C	rs531009	A	C	C	Hoxc9_MA0485.1	5	1	-	7.270103419576629	0.37156044385703385	CCCCATAAAACAC
chr11	126629457	126629458	chr11:126629458:C:A	rs113904001	C	A	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr11	126703880	126703881	chr11:126703881:T:C	rs147265788	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	126725859	126725860	chr11:126725860:T:C	rs73571596	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr11	126900171	126900172	chr11:126900172:T:C	rs1894223	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr11	127050337	127050338	chr11:127050338:T:G	rs59955660	T	G	G	Hoxc9_MA0485.1	11	1	+	8.767915332999571	5.212971319340226	GGTCATAAATTTG
chr11	127101430	127101431	chr11:127101431:A:C	rs12225946	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	127117602	127117603	chr11:127117603:C:T	rs12364670	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	127493754	127493755	chr11:127493755:G:C	rs1431577	G	C	G	Hoxc9_MA0485.1	0	1	-	7.973230796300341	9.260939205485464	CGCAATTAATCAC
chr11	127523521	127523522	chr11:127523522:T:C	rs28584579	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr11	127560967	127560968	chr11:127560968:A:G	rs77529780	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	127578393	127578394	chr11:127578394:A:T	rs11821514	A	T	A	Hoxc9_MA0485.1	0	1	+	9.455774932222722	8.933225313847972	AGCTATAAATTAA
chr11	127601505	127601506	chr11:127601506:A:G	rs12417805	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr11	127882610	127882611	chr11:127882611:A:C	rs76140255	A	C	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr11	127883141	127883142	chr11:127883142:C:T	rs71479968	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	128210629	128210630	chr11:128210630:A:G	rs78421285	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr11	128210665	128210666	chr11:128210666:G:A	rs747163	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr11	128210793	128210794	chr11:128210794:C:T	rs140281121	C	T	C	Hoxc9_MA0485.1	12	1	+	9.773165985206388	9.519169031441836	TGGCATAAATCAC
chr11	128315954	128315955	chr11:128315955:G:C	rs10893844	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr11	128335806	128335807	chr11:128335807:T:C	rs61907741	T	C	T	Hoxc9_MA0485.1	0	1	-	7.650407170129396	8.183222303420395	AGCCATGAATCCT
chr11	128349967	128349968	chr11:128349968:G:A	rs11221258	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	128379957	128379958	chr11:128379958:A:G	rs7123087	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr11	128507584	128507585	chr11:128507585:A:G	rs7118744	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	128658758	128658759	chr11:128658759:C:G	rs11826788	C	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	128745590	128745591	chr11:128745591:A:G	rs1238566	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr11	128790124	128790125	chr11:128790125:C:A	rs608764	C	A	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr11	128825654	128825655	chr11:128825655:C:G	rs75575482	C	G	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr11	128828297	128828298	chr11:128828298:T:C	rs73575648	T	C	C	Hoxc9_MA0485.1	8	1	-	7.3788278734040675	0.4768693632691083	TGCTGTGAATCAC
chr11	128949998	128949999	chr11:128949999:C:T	rs2846687	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	129061659	129061660	chr11:129061660:G:A	rs73013464	G	A	G	Hoxc9_MA0485.1	3	1	-	7.149045471924139	6.260792698901516	GGACGTGAATCAT
chr11	129206273	129206274	chr11:129206274:C:T	rs2323579	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	129378020	129378021	chr11:129378021:A:T	rs1493544	A	T	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr11	129440623	129440624	chr11:129440624:G:T	rs61911241	G	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr11	130184494	130184495	chr11:130184495:G:A	rs4479000	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr11	130359358	130359359	chr11:130359359:C:T	rs11222067	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr11	130483566	130483567	chr11:130483567:G:A	rs7106030	G	A	A	Hoxc9_MA0485.1	3	1	-	8.76472590390065	7.8764731308780265	GCACATAAATCTA
chr11	130847803	130847804	chr11:130847804:C:T	rs79582389	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	130847809	130847810	chr11:130847810:C:A	rs142970532	C	A	C	Hoxc9_MA0485.1	3	1	+	7.149045471924139	6.414294264353669	GGACGTGAATCAT
chr11	130847821	130847822	chr11:130847822:C:T	rs7104367	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	131001060	131001061	chr11:131001061:T:C	rs1433980	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr11	131300110	131300111	chr11:131300111:G:A	rs11222567	G	A	g	Hoxc9_MA0485.1	22	0	+	0	0	.
chr11	131307583	131307584	chr11:131307584:A:G	rs113677680	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	131504375	131504376	chr11:131504376:A:C	rs1000909648	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	131506481	131506482	chr11:131506482:C:T	rs73026139	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr11	131522117	131522118	chr11:131522118:A:T	rs388076	A	T	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr11	131522128	131522129	chr11:131522129:C:T	rs414864	C	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	131533325	131533326	chr11:131533326:G:A	rs112951817	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	131811609	131811610	chr11:131811610:T:G	chr11:131811610:T:G	T	G	T	Hoxc9_MA0485.1	7	1	-	7.6582600802780805	0.7540310110725014	TGACATCAATCAG
chr11	132186091	132186092	chr11:132186092:C:T	rs7123193	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr11	132293609	132293610	chr11:132293610:A:G	rs12293070	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	132982904	132982905	chr11:132982905:T:C	rs76825080	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr11	133173982	133173983	chr11:133173983:G:A	rs112590453	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr11	133173999	133174000	chr11:133174000:G:A	rs520024	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr11	133507371	133507372	chr11:133507372:C:T	rs73587651	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr11	133836800	133836801	chr11:133836801:G:A	rs2723613	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr11	133917049	133917050	chr11:133917050:A:C	rs3802922	A	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr11	133966709	133966710	chr11:133966710:T:A	rs329683	T	A	A	Hoxc9_MA0485.1	8	1	-	12.131457443497224	5.229498933362268	GCCCATAAATCAT
chr11	134124380	134124381	chr11:134124381:G:A	rs470952	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr11	134332697	134332698	chr11:134332698:G:A	rs370351769	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr11	134340766	134340767	chr11:134340767:T:C	rs11223762	T	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr11	134404781	134404782	chr11:134404782:A:G	rs1866769	A	G	A	Hoxc9_MA0485.1	11	1	-	9.075646906357997	7.880246436667939	ACACATAAATCTC
chr11	134525409	134525410	chr11:134525410:A:T	rs112625207	A	T	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr11	134537976	134537977	chr11:134537977:G:A	rs114963768	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr11	134595849	134595850	chr11:134595850:C:T	rs4937920	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr11	134607130	134607131	chr11:134607131:G:A	rs73040383	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	134608865	134608866	chr11:134608866:C:T	rs67343751	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr11	134654632	134654633	chr11:134654633:G:A	rs75091985	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr11	134686685	134686686	chr11:134686686:C:T	rs3737494	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr11	134686727	134686728	chr11:134686728:T:C	rs3737493	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr11	134710875	134710876	chr11:134710876:A:G	rs11602026	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr11	134781758	134781759	chr11:134781759:G:A	rs1394507309	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr11	134888625	134888626	chr11:134888626:T:A	rs4937975	T	A	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	112172	112173	chr12:112173:A:G	rs76444570	A	G	.	Hoxc9_MA0485.1	5	1	-	11.303660265683876	6.8183489030453925	GGTCATAAATCAA
chr12	226755	226756	chr12:226756:C:A	rs555044	C	A	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	293480	293481	chr12:293481:A:G	rs57022939	A	G	a	Hoxc9_MA0485.1	18	0	-	0	0	.
chr12	386050	386051	chr12:386051:G:T	rs10774152	G	T	g	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	576396	576397	chr12:576397:G:A	rs772250298	G	A	G	Hoxc9_MA0485.1	1	1	+	11.720578974284697	10.161135400374636	GGCCATAAATTAC
chr12	607606	607607	chr12:607607:T:C	rs778089362	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	618001	618002	chr12:618002:G:T	rs74396113	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	750670	750671	chr12:750671:C:A	rs11064514	C	A	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	789233	789234	chr12:789234:C:A	rs724709	C	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	949766	949767	chr12:949767:A:T	rs1274468239	A	T	-	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	949796	949797	chr12:949797:G:A	chr12:949797:G:A	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	1096535	1096536	chr12:1096536:A:G	rs10505721	A	G	G	Hoxc9_MA0485.1	7	1	+	7.021899771183617	0.11767070197804003	CCCAGTCAATCAC
chr12	1096538	1096539	chr12:1096539:C:G	rs75753958	C	G	C	Hoxc9_MA0485.1	10	1	+	7.021899771183617	2.220828963436339	CCCAGTCAATCAC
chr12	1117694	1117695	chr12:1117695:C:T	rs61914260	C	T	C	Hoxc9_MA0485.1	0	1	-	8.094163487409098	7.561348354118096	GGCAGTAAATAAA
chr12	1171931	1171932	chr12:1171932:T:A	rs16928249	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	1208130	1208131	chr12:1208131:C:G	rs7954213	C	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	1217953	1217954	chr12:1217954:G:A	rs59594246	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	1217962	1217963	chr12:1217963:T:C	rs60449600	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	1350562	1350563	chr12:1350563:A:T	chr12:1350563:A:T	A	T	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	1350578	1350579	chr12:1350579:G:A	rs12423105	G	A	A	Hoxc9_MA0485.1	12	1	+	9.698004493113736	9.572324136280265	TGCCATAAATCCG
chr12	1491811	1491812	chr12:1491812:A:T	rs1064125	A	T	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	1491857	1491858	chr12:1491858:A:G	rs4766374	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	1573010	1573011	chr12:1573011:C:T	rs10773961	C	T	T	Hoxc9_MA0485.1	3	1	+	10.781006000477964	9.89275322745534	GGCCGTAAATCTG
chr12	1629785	1629786	chr12:1629786:G:A	rs570677502	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr12	1629804	1629805	chr12:1629805:G:C	rs375286028	G	C	G	Hoxc9_MA0485.1	2	1	-	8.79075917941302	6.094875037691714	CCCCATAAATCCT
chr12	1728841	1728842	chr12:1728842:G:T	rs9739162	G	T	G	Hoxc9_MA0485.1	10	1	-	8.134767158796823	5.450766824922874	ATCTGTAAATCAG
chr12	1844929	1844930	chr12:1844930:C:G	rs4766424	C	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	1879357	1879358	chr12:1879358:G:A	rs58041839	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	1914319	1914320	chr12:1914320:C:G	rs16928921	C	G	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	2018084	2018085	chr12:2018085:C:T	rs113503723	C	T	C	Hoxc9_MA0485.1	2	1	+	9.853668828073568	8.476650350912346	AACAATAAATCAA
chr12	2018086	2018087	chr12:2018087:A:G	rs2429136	A	G	A	Hoxc9_MA0485.1	4	1	+	9.853668828073568	8.685905114081985	AACAATAAATCAA
chr12	2047737	2047738	chr12:2047738:T:C	rs7138372	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	2117532	2117533	chr12:2117533:A:C	rs10848617	A	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	2213757	2213758	chr12:2213758:G:A	rs77810332	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	2213978	2213979	chr12:2213979:G:A	rs55961529	G	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr12	2290128	2290129	chr12:2290129:G:T	rs116698755	G	T	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	2302031	2302032	chr12:2302032:C:A	rs16929233	C	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	2307513	2307514	chr12:2307514:T:C	rs117639423	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	2324732	2324733	chr12:2324733:T:C	rs2239045	T	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	2414188	2414189	chr12:2414189:A:G	rs7312105	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	2414203	2414204	chr12:2414204:A:G	rs7312107	A	G	A	Hoxc9_MA0485.1	5	1	-	9.218720247372987	4.733408884734502	GACAGTAAATCAA
chr12	2645364	2645365	chr12:2645365:A:G	rs117660151	A	G	A	Hoxc9_MA0485.1	5	1	-	9.13810102784691	4.652789665208423	GGCCATTAATCTC
chr12	2668601	2668602	chr12:2668602:A:G	rs6489375	A	G	-	Hoxc9_MA0485.1	4	1	+	8.168010188930019	7.000246474938435	TCCAATCAATCAT
chr12	2684852	2684853	chr12:2684853:A:C	rs113171262	A	C	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	2719597	2719598	chr12:2719598:C:T	rs34372482	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	2785252	2785253	chr12:2785253:T:C	rs34915583	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr12	2977055	2977056	chr12:2977056:A:G	rs73246967	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr12	3039073	3039074	chr12:3039074:C:T	rs7969943	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	3144601	3144602	chr12:3144602:C:T	rs7298272	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr12	3146160	3146161	chr12:3146161:G:A	rs10848813	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr12	3146195	3146196	chr12:3146196:A:G	rs7133793	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	3151574	3151575	chr12:3151575:G:T	rs75707558	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	3223118	3223119	chr12:3223119:T:C	rs41423644	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	3273396	3273397	chr12:3273397:C:T	rs479105	C	T	C	Hoxc9_MA0485.1	3	1	+	7.937143662626279	7.048890889603656	GGGCATCAATCAG
chr12	3471422	3471423	chr12:3471423:A:G	rs76896716	A	G	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	3541276	3541277	chr12:3541277:C:T	rs11062713	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	3947529	3947530	chr12:3947530:T:C	rs6489506	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	3950955	3950956	chr12:3950956:G:A	rs7956027	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	4137135	4137136	chr12:4137136:T:C	rs1978311	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	4320481	4320482	chr12:4320482:C:T	rs73042190	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	4380068	4380069	chr12:4380069:T:C	rs3812822	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	4412733	4412734	chr12:4412734:A:G	rs929710	A	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	4412746	4412747	chr12:4412747:G:A	rs929709	G	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	4569047	4569048	chr12:4569048:A:C	rs11063234	A	C	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr12	4597564	4597565	chr12:4597565:C:A	rs12317865	C	A	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr12	4821193	4821194	chr12:4821194:G:A	rs12423234	G	A	a	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	5085581	5085582	chr12:5085582:C:T	rs1842192	C	T	C	Hoxc9_MA0485.1	2	1	+	7.650407170129396	6.2733886929681715	AGCCATGAATCCT
chr12	5317821	5317822	chr12:5317822:A:G	rs75837397	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	5342964	5342965	chr12:5342965:T:C	rs7307314	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	5378084	5378085	chr12:5378085:C:T	rs145261109	C	T	C	Hoxc9_MA0485.1	0	1	-	9.442775356328871	8.90996022303787	GGCCATAAAACAT
chr12	5378279	5378280	chr12:5378280:G:A	rs113083952	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	5452955	5452956	chr12:5452956:G:A	rs77424168	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	5523759	5523760	chr12:5523760:T:G	rs35492614	T	G	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr12	5792496	5792497	chr12:5792497:A:G	rs7969834	A	G	G	Hoxc9_MA0485.1	3	1	+	8.483774884789105	3.7021296203738823	TTCAGTAAATCAC
chr12	5881551	5881552	chr12:5881552:C:T	rs148618407	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	5976346	5976347	chr12:5976347:A:G	rs216855	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	6021043	6021044	chr12:6021044:A:G	rs73261078	A	G	G	Hoxc9_MA0485.1	12	1	-	11.145262198758402	11.399259152522955	AGCAATAAATCTT
chr12	6143041	6143042	chr12:6143042:T:G	rs2159369	T	G	-	Hoxc9_MA0485.1	0	1	+	10.622712580383652	11.678077332049405	TGCAATAAATCTT
chr12	6143046	6143047	chr12:6143047:T:G	rs2159368	T	G	-	Hoxc9_MA0485.1	5	1	+	10.622712580383652	3.724169604664059	TGCAATAAATCTT
chr12	6230282	6230283	chr12:6230283:T:C	rs1418470964	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	6371802	6371803	chr12:6371803:T:C	rs4764587	T	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	6436827	6436828	chr12:6436828:A:C	rs12817967	A	C	C	Hoxc9_MA0485.1	4	1	+	10.4418368725734	5.30391019132374	TCCTATAAATCAC
chr12	7485878	7485879	chr12:7485879:A:C	rs78288163	A	C	.	Hoxc9_MA0485.1	3	1	+	9.56096439601067	10.295715603581138	AGGAATAAATCAC
chr12	7527527	7527528	chr12:7527528:G:A	rs57750193	G	A	G	Hoxc9_MA0485.1	0	1	+	11.441654558016912	10.90883942472591	GTCCATAAATCAC
chr12	7658497	7658498	chr12:7658498:A:G	rs1292498337	A	G	a	Hoxc9_MA0485.1	9	1	-	12.147863609554099	5.259637795180468	AGCCATAAATCAA
chr12	7686007	7686008	chr12:7686008:C:T	rs12310721	C	T	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	8077392	8077393	chr12:8077393:G:C	rs767119	G	C	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	8157994	8157995	chr12:8157995:A:G	rs4284474	A	G	.	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	8610408	8610409	chr12:8610409:G:A	rs1561559	G	A	A	Hoxc9_MA0485.1	2	1	-	11.088338150065608	9.711319672904386	GGCAATAAATCTA
chr12	8697479	8697480	chr12:8697480:T:A	rs562811686	T	A	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr12	8996968	8996969	chr12:8996969:G:A	rs750129856	G	A	G	Hoxc9_MA0485.1	1	1	+	8.919372064387298	7.359928490477237	TGCTATAAATTTC
chr12	9189332	9189333	chr12:9189333:T:G	rs6487662	T	G	G	Hoxc9_MA0485.1	5	1	+	9.026974017044886	2.128431041325293	GACCATAAATAAT
chr12	9197113	9197114	chr12:9197114:A:G	rs59948620	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	9326361	9326362	chr12:9326362:G:T	rs4316551	G	T	g	Hoxc9_MA0485.1	2	1	-	8.47315819553812	6.553755223134368	ACCCATAAATTTG
chr12	9364767	9364768	chr12:9364768:G:A	rs12366431	G	A	g	Hoxc9_MA0485.1	17	0	-	0	0	.
chr12	9615952	9615953	chr12:9615953:A:T	rs58158418	A	T	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	9771147	9771148	chr12:9771148:A:T	rs7316342	A	T	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	9876747	9876748	chr12:9876748:C:T	rs6488236	C	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	9902611	9902612	chr12:9902612:T:C	rs7304779	T	C	t	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	9920090	9920091	chr12:9920091:T:C	rs10845005	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	10101643	10101644	chr12:10101644:C:T	rs11053585	C	T	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	10140078	10140079	chr12:10140079:T:C	rs190698640	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	10153691	10153692	chr12:10153692:T:C	rs11053642	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	10309283	10309284	chr12:10309284:A:G	rs10734825	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	10320918	10320919	chr12:10320919:T:C	rs11053744	T	C	T	Hoxc9_MA0485.1	6	1	-	9.075646906357997	6.041441139848574	ACACATAAATCTC
chr12	10363866	10363867	chr12:10363867:G:A	rs149162276	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	11160260	11160261	chr12:11160261:C:T	rs6488355	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	11363587	11363588	chr12:11363588:G:A	rs61930115	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr12	11486128	11486129	chr12:11486129:A:G	rs2965704	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	11506787	11506788	chr12:11506788:T:G	rs17209715	T	G	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr12	11628940	11628941	chr12:11628941:G:C	rs138987986	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	11745164	11745165	chr12:11745165:G:C	rs1009954	G	C	g	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	11752625	11752626	chr12:11752626:C:T	rs200112014	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	11822883	11822884	chr12:11822884:A:G	rs17819001	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	11880936	11880937	chr12:11880937:C:T	rs4763731	C	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	11983515	11983516	chr12:11983516:A:G	rs12316914	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	12003387	12003388	chr12:12003388:A:C	rs7305426	A	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	12311882	12311883	chr12:12311883:C:T	rs36094202	C	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	12314092	12314093	chr12:12314093:A:C	rs9669619	A	C	A	Hoxc9_MA0485.1	7	1	+	8.360043785014408	1.4558147158088302	TGCTGTAAATCCC
chr12	12314101	12314102	chr12:12314102:G:A	rs34900069	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	12323751	12323752	chr12:12323752:T:C	rs60871036	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	12323759	12323760	chr12:12323760:A:G	rs57468925	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	12323767	12323768	chr12:12323768:A:C	rs74384877	A	C	A	Hoxc9_MA0485.1	7	1	+	8.884913212183763	1.980684142978184	TGGTATAAATCAC
chr12	12520702	12520703	chr12:12520703:G:A	rs3815591	G	A	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	12585216	12585217	chr12:12585217:A:C	rs73063476	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	12645403	12645404	chr12:12645404:T:C	rs34051318	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	12676979	12676980	chr12:12676980:C:T	rs2417221	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	12791807	12791808	chr12:12791808:C:T	rs34810457	C	T	C	Hoxc9_MA0485.1	3	1	+	9.304736546395416	8.416483773372795	TCCCGTAAATCTC
chr12	12916256	12916257	chr12:12916257:C:T	rs778487892	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr12	13369658	13369659	chr12:13369659:C:T	rs2060300	C	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	13595818	13595819	chr12:13595819:G:C	rs182073569	G	C	G	Hoxc9_MA0485.1	12	1	-	8.91139663604907	8.19334085713419	ACCTATAAATCCC
chr12	13892783	13892784	chr12:13892784:G:A	rs10845858	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	13911526	13911527	chr12:13911527:C:T	rs4764039	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr12	13982340	13982341	chr12:13982341:T:A	rs1024893	T	A	T	Hoxc9_MA0485.1	9	1	+	9.668234027436279	5.840591458936255	TTCCATAAATCAG
chr12	14073255	14073256	chr12:14073256:G:A	rs73055516	G	A	A	Hoxc9_MA0485.1	2	1	-	11.290274224345076	9.913255747183852	AGCCATAAATCTA
chr12	14622279	14622280	chr12:14622280:T:C	rs2287538	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	14802541	14802542	chr12:14802542:A:T	rs79193474	A	T	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	14999212	14999213	chr12:14999213:G:T	rs12231027	G	T	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr12	15117230	15117231	chr12:15117231:C:G	rs11056358	C	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	15179407	15179408	chr12:15179408:G:C	rs2193172	G	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	15179418	15179419	chr12:15179419:C:T	rs759529	C	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	15672966	15672967	chr12:15672967:T:C	rs7486849	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	15842334	15842335	chr12:15842335:A:C	rs555169197	A	C	A	Hoxc9_MA0485.1	7	1	+	10.077993873079217	3.1737648038736395	AGCTGTAAATCTC
chr12	15983017	15983018	chr12:15983018:G:C	rs1868805	G	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr12	16026982	16026983	chr12:16026983:G:A	rs10846269	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	16071895	16071896	chr12:16071896:T:A	rs1901234	T	A	T	Hoxc9_MA0485.1	8	1	-	9.69612738864417	2.79416887850921	ACCAGTAAATCAT
chr12	16071910	16071911	chr12:16071911:G:A	rs2417527	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	16530916	16530917	chr12:16530917:G:A	rs565855213	G	A	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	18244571	18244572	chr12:18244572:G:A	rs10743261	G	A	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	18920101	18920102	chr12:18920102:C:T	rs75001290	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	18976142	18976143	chr12:18976143:C:T	rs73337133	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	19235100	19235101	chr12:19235101:G:A	rs57986592	G	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	19356970	19356971	chr12:19356971:A:T	rs10082906	A	T	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	19516395	19516396	chr12:19516396:A:G	rs7971147	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	19516396	19516397	chr12:19516397:G:T	rs7971443	G	T	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	19545504	19545505	chr12:19545505:G:A	rs12424628	G	A	g	Hoxc9_MA0485.1	25	0	+	0	0	.
chr12	19648657	19648658	chr12:19648658:G:T	rs73078957	G	T	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	19648660	19648661	chr12:19648661:G:T	rs6486986	G	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	19683199	19683200	chr12:19683200:A:G	rs4424735	A	G	A	Hoxc9_MA0485.1	8	1	+	10.991760633306248	4.0898021231712915	AGCTATAAATCTT
chr12	19823672	19823673	chr12:19823673:T:C	rs2638419	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	19825930	19825931	chr12:19825931:A:G	rs12831504	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	20018538	20018539	chr12:20018539:A:C	rs16922512	A	C	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	20141037	20141038	chr12:20141038:C:T	rs7967482	C	T	T	Hoxc9_MA0485.1	1	1	+	10.475620786809552	9.531820947564686	ACTCATAAATCAC
chr12	20183217	20183218	chr12:20183218:C:T	rs16922722	C	T	C	Hoxc9_MA0485.1	10	1	+	8.082736276181157	6.278900371872404	TGCCATTAATCTC
chr12	20420301	20420302	chr12:20420302:G:A	rs10841515	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	20439333	20439334	chr12:20439334:G:A	rs73239573	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	20750535	20750536	chr12:20750536:T:G	rs972506	T	G	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr12	21414158	21414159	chr12:21414159:C:T	rs142018962	C	T	C	Hoxc9_MA0485.1	11	1	+	8.400022778524145	9.595423248214203	AGCAATAAATTCC
chr12	21434906	21434907	chr12:21434907:G:T	rs61927853	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	21444311	21444312	chr12:21444312:A:G	rs714356	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	21656872	21656873	chr12:21656873:C:T	rs1677074	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	21662346	21662347	chr12:21662347:G:T	rs71539437	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	21719477	21719478	chr12:21719478:A:G	rs74067649	A	G	A	Hoxc9_MA0485.1	11	1	+	10.876842838536348	6.464309439667979	GGCCATAAATTAA
chr12	21819884	21819885	chr12:21819885:T:A	rs12298537	T	A	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	22068774	22068775	chr12:22068775:T:C	rs10841933	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	22275901	22275902	chr12:22275902:A:G	rs59820150	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	22275918	22275919	chr12:22275919:C:T	rs61921859	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	22286980	22286981	chr12:22286981:C:T	rs7132027	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	22287003	22287004	chr12:22287004:A:G	rs56083944	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr12	22335273	22335274	chr12:22335274:T:C	chr12:22335274:T:C	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	22409631	22409632	chr12:22409632:A:G	rs73074692	A	G	A	Hoxc9_MA0485.1	4	1	+	9.688514734163247	8.520751020171662	CACAATAAATCAT
chr12	22529746	22529747	chr12:22529747:G:T	rs7303512	G	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr12	23120059	23120060	chr12:23120060:T:C	rs1406772	T	C	T	Hoxc9_MA0485.1	5	1	+	8.480429305081671	3.995117942443186	ACAAATAAATCAG
chr12	23222160	23222161	chr12:23222161:C:A	rs17365263	C	A	C	Hoxc9_MA0485.1	12	1	-	9.002671732000552	9.466730557150878	CCTCATAAATCAG
chr12	23584391	23584392	chr12:23584392:C:T	rs11046991	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr12	23585896	23585897	chr12:23585897:C:T	rs73089384	C	T	c	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	23585926	23585927	chr12:23585927:A:C	rs373457828	A	C	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	24070288	24070289	chr12:24070289:A:T	chr12:24070289:A:T	A	T	A	Hoxc9_MA0485.1	11	1	+	8.784417823871365	7.926828438662344	TGGAATAAATCAT
chr12	24472242	24472243	chr12:24472243:C:T	rs11047466	C	T	C	Hoxc9_MA0485.1	4	1	-	7.24207724134918	8.409840955340762	GGCTGTCAATCCC
chr12	24609226	24609227	chr12:24609227:G:C	rs7137330	G	C	G	Hoxc9_MA0485.1	12	1	+	9.599247718089694	10.317303497004573	CGACATAAATCAG
chr12	24839834	24839835	chr12:24839835:T:C	rs12310217	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	24911343	24911344	chr12:24911344:A:G	rs79448996	A	G	A	Hoxc9_MA0485.1	7	1	+	7.751395106769842	0.8471660375642645	CGCCACAAATCAC
chr12	25159104	25159105	chr12:25159105:T:C	rs11047868	T	C	T	Hoxc9_MA0485.1	5	1	+	9.44570310073499	4.9603917380965035	GATTATAAATCAT
chr12	25186908	25186909	chr12:25186909:A:G	rs11047880	A	G	A	Hoxc9_MA0485.1	12	1	-	8.915684897572088	9.169681851336641	AGAAGTAAATCAT
chr12	25186936	25186937	chr12:25186937:T:G	rs11836162	T	G	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	25370265	25370266	chr12:25370266:A:C	rs10842544	A	C	A	Hoxc9_MA0485.1	3	1	+	10.390368922864283	11.125120130434752	CGCAATAAATCTT
chr12	25687434	25687435	chr12:25687435:T:C	rs6487508	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	25694232	25694233	chr12:25694233:T:G	rs535481859	T	G	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	25743633	25743634	chr12:25743634:A:C	rs4963635	A	C	C	Hoxc9_MA0485.1	0	1	+	8.340895698787527	7.586002422893407	ACAAATAAATCTC
chr12	25830330	25830331	chr12:25830331:G:A	rs7955324	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	25863133	25863134	chr12:25863134:G:A	rs576916033	G	A	G	Hoxc9_MA0485.1	4	1	+	7.295232143738148	8.462995857729732	GCCTGTGAATCAC
chr12	25897247	25897248	chr12:25897248:C:T	rs1177523	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	26078122	26078123	chr12:26078123:G:T	rs141216216	G	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	26120154	26120155	chr12:26120155:C:G	rs1048155	C	G	C	Hoxc9_MA0485.1	2	1	+	9.359938094164338	6.664053952443031	AGCTGTAAATCTG
chr12	26185360	26185361	chr12:26185361:A:C	rs10842688	A	C	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	26286368	26286369	chr12:26286369:G:A	rs7954146	G	A	G	Hoxc9_MA0485.1	2	1	-	7.175287448544609	5.7982689713833855	CCCTATGAATCAC
chr12	26287937	26287938	chr12:26287938:G:A	rs561034332	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	26443410	26443411	chr12:26443411:A:G	rs3759116	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	26623291	26623292	chr12:26623292:G:A	rs11048622	G	A	G	Hoxc9_MA0485.1	6	1	+	8.316809185915721	11.351014952425142	GGACATGAATCAT
chr12	26851721	26851722	chr12:26851722:T:C	rs113203278	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	26939606	26939607	chr12:26939607:A:G	rs574388061	A	G	A	Hoxc9_MA0485.1	4	1	+	9.277823993800133	8.110060279808549	ATTCATAAATCAT
chr12	27193398	27193399	chr12:27193399:A:G	rs11048910	A	G	A	Hoxc9_MA0485.1	8	1	+	8.108683297337997	1.206724787203037	GCTTGTAAATCAA
chr12	27193410	27193411	chr12:27193411:C:T	rs7316240	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	27311590	27311591	chr12:27311591:A:C	rs12581569	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	27607905	27607906	chr12:27607906:A:G	rs11049065	A	G	A	Hoxc9_MA0485.1	1	1	+	9.825847619454885	11.385291193364944	AACTATAAATCAG
chr12	27635540	27635541	chr12:27635541:A:G	rs1002422	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	27866090	27866091	chr12:27866091:G:A	rs79881709	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	28035839	28035840	chr12:28035840:T:A	rs2347594	T	A	A	Hoxc9_MA0485.1	0	1	-	8.340895698787527	7.818346080412775	ACAAATAAATCTC
chr12	28072303	28072304	chr12:28072304:A:C	rs565434926	A	C	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr12	28104607	28104608	chr12:28104608:G:A	rs78175654	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	28189462	28189463	chr12:28189463:T:A	rs79415174	T	A	T	Hoxc9_MA0485.1	6	1	-	8.411497777753057	4.882773312215537	GAGCATAAATCTC
chr12	28456073	28456074	chr12:28456074:G:A	rs11049621	G	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	28486786	28486787	chr12:28486787:A:G	rs12370338	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	28558611	28558612	chr12:28558612:A:G	rs11049713	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	28578967	28578968	chr12:28578968:A:G	rs1511549	A	G	G	Hoxc9_MA0485.1	3	1	+	8.968645817458006	4.187000553042784	AGCAATGAATCAT
chr12	28893172	28893173	chr12:28893173:T:G	rs10843270	T	G	G	Hoxc9_MA0485.1	6	1	-	10.103283488431451	7.929952193100468	TGTAATAAATCAT
chr12	29104569	29104570	chr12:29104570:G:A	rs73067724	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	29299479	29299480	chr12:29299480:T:C	rs6487802	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	29385627	29385628	chr12:29385628:C:T	rs10771521	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	29516834	29516835	chr12:29516835:T:C	rs11050264	T	C	T	Hoxc9_MA0485.1	4	1	-	10.890562783608878	9.722799069617295	TGCAATAAATCAA
chr12	29527940	29527941	chr12:29527941:G:A	rs60743264	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	29537564	29537565	chr12:29537565:T:G	rs61923874	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	29614901	29614902	chr12:29614902:A:G	rs12819780	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	29672683	29672684	chr12:29672684:A:G	rs11050361	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	29698986	29698987	chr12:29698987:T:G	rs11050396	T	G	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	30010257	30010258	chr12:30010258:C:T	rs10506051	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	30015900	30015901	chr12:30015901:T:C	rs12819535	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	30184856	30184857	chr12:30184857:C:T	rs4459396	C	T	T	Hoxc9_MA0485.1	4	1	-	7.336167886175699	8.503931600167284	CACCGTCAATCAC
chr12	30184871	30184872	chr12:30184872:C:T	rs12814977	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	30236045	30236046	chr12:30236046:G:A	rs10400585	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	30302591	30302592	chr12:30302592:T:C	rs2703364	T	C	t	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	30358085	30358086	chr12:30358086:C:G	rs75837587	C	G	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	30418189	30418190	chr12:30418190:C:A	rs885106	C	A	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr12	30451016	30451017	chr12:30451017:A:G	rs77970469	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr12	30594664	30594665	chr12:30594665:T:C	rs1258285	T	C	C	Hoxc9_MA0485.1	9	1	+	7.936396663873096	1.048170849499464	GGACTTAAATCAC
chr12	30647105	30647106	chr12:30647106:G:C	rs3910561	G	C	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	30695263	30695264	chr12:30695264:G:T	rs954765676	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	30939439	30939440	chr12:30939440:T:C	rs2241325	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	30991601	30991602	chr12:30991602:T:C	rs76655009	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	31216455	31216456	chr12:31216456:A:T	rs7975008	A	T	.	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	31474649	31474650	chr12:31474650:C:T	rs1012154	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	31522202	31522203	chr12:31522203:T:C	rs139854995	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	31522250	31522251	chr12:31522251:G:A	rs4931512	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	31578948	31578949	chr12:31578949:A:G	rs554639366	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	31595045	31595046	chr12:31595046:T:C	rs78495432	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	31705911	31705912	chr12:31705912:A:G	rs34841509	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	31731897	31731898	chr12:31731898:G:A	rs12317948	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	31804909	31804910	chr12:31804910:C:T	rs4931560	C	T	c	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	31808606	31808607	chr12:31808607:C:T	rs7298443	C	T	C	Hoxc9_MA0485.1	1	1	-	8.597513837061893	7.038070263151831	AGTCATCAATCAA
chr12	31838983	31838984	chr12:31838984:T:G	rs12300775	T	G	t	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	31856687	31856688	chr12:31856688:T:G	rs11051630	T	G	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	31876642	31876643	chr12:31876643:A:G	rs1259724	A	G	g	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	31876647	31876648	chr12:31876648:G:C	rs118122546	G	C	g	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	31923801	31923802	chr12:31923802:T:C	rs1259769	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	32156005	32156006	chr12:32156006:C:A	rs10844142	C	A	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr12	32197804	32197805	chr12:32197805:A:G	rs7135483	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	32244580	32244581	chr12:32244581:A:G	rs10844159	A	G	A	Hoxc9_MA0485.1	4	1	+	10.051250039516887	8.883486325525304	ATCCATAAATCTC
chr12	32312172	32312173	chr12:32312173:G:T	rs7972212	G	T	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	32312173	32312174	chr12:32312174:C:T	rs7972023	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	32366271	32366272	chr12:32366272:G:C	rs113726585	G	C	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	32390551	32390552	chr12:32390552:T:C	rs73296057	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	32463863	32463864	chr12:32463864:A:G	rs2047641	A	G	A	Hoxc9_MA0485.1	12	1	-	8.619713878313977	8.87371083207853	GCAAATAAATCTT
chr12	32512615	32512616	chr12:32512616:A:G	rs11608343	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	32512622	32512623	chr12:32512623:G:T	rs16919974	G	T	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	32543075	32543076	chr12:32543076:A:G	rs7305459	A	G	G	Hoxc9_MA0485.1	1	1	+	8.791443402591804	10.350886976501865	CACCGTAAATCAG
chr12	32572804	32572805	chr12:32572805:T:C	rs16920058	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	32577623	32577624	chr12:32577624:C:A	rs7961549	C	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	32668131	32668132	chr12:32668132:G:A	rs7316283	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	32809213	32809214	chr12:32809214:G:A	rs11052259	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	32873909	32873910	chr12:32873910:T:C	rs60549952	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	33644454	33644455	chr12:33644455:T:C	rs946127886	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	33644492	33644493	chr12:33644493:A:G	rs1948152	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	33729729	33729730	chr12:33729730:G:A	rs2171289	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	34390943	34390944	chr12:34390944:T:C	rs7398471	T	C	.	Hoxc9_MA0485.1	4	1	-	7.0762691914478415	5.908505477456258	GGGCATGAATCAG
chr12	34394508	34394509	chr12:34394509:C:A	rs112248975	C	A	.	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	34406591	34406592	chr12:34406592:T:C	rs74077627	T	C	.	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr12	34597197	34597198	chr12:34597198:C:T	rs74072726	C	T	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr12	34598096	34598097	chr12:34598097:G:C	rs11832570	G	C	.	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	34607865	34607866	chr12:34607866:G:T	rs59819642	G	T	.	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	38197042	38197043	chr12:38197043:G:T	rs112018549	G	T	g	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	38442995	38442996	chr12:38442996:C:T	rs191044778	C	T	A	Hoxc9_MA0485.1	6	1	+	8.44938128505267	7.093988114846136	TGCAATCAATCTT
chr12	38557734	38557735	chr12:38557735:G:A	rs73267165	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr12	38890353	38890354	chr12:38890354:C:G	rs60605001	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	39443164	39443165	chr12:39443165:T:C	rs532130145	T	C	T	Hoxc9_MA0485.1	11	1	-	8.789630264801444	4.3770968659330745	AGCCGTGAATCAC
chr12	39443177	39443178	chr12:39443178:G:C	rs186718931	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	39830500	39830501	chr12:39830501:A:G	rs7962260	A	G	G	Hoxc9_MA0485.1	4	1	+	7.348769528621772	6.181005814630187	CCCCATCAATCTG
chr12	39912940	39912941	chr12:39912941:C:T	rs12813530	C	T	C	Hoxc9_MA0485.1	1	1	-	10.661061305284425	9.101617731374365	CGCCATAAATCTG
chr12	39940064	39940065	chr12:39940065:C:G	rs77222415	C	G	C	Hoxc9_MA0485.1	11	1	+	10.684612936638814	8.325069392669526	AGCCATAAATCCT
chr12	40210265	40210266	chr12:40210266:A:G	rs2638229	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	40210272	40210273	chr12:40210273:T:G	rs2638230	T	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	40238296	40238297	chr12:40238297:T:G	rs10878246	T	G	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	40238297	40238298	chr12:40238298:C:T	rs10878247	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	40602210	40602211	chr12:40602211:T:C	rs1918943	T	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	40673079	40673080	chr12:40673080:C:T	rs77429930	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	40733960	40733961	chr12:40733961:C:G	rs74078570	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	40794408	40794409	chr12:40794409:C:A	rs17541461	C	A	C	Hoxc9_MA0485.1	0	1	-	8.090463758155922	7.03509900649017	GGCTATAAAACAG
chr12	40980894	40980895	chr12:40980895:C:A	rs10784981	C	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	41045643	41045644	chr12:41045644:G:A	rs280374	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	41304539	41304540	chr12:41304540:G:A	rs11180727	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	41340005	41340006	chr12:41340006:T:G	rs10880043	T	G	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	41605033	41605034	chr12:41605034:C:T	rs10082917	C	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	41605067	41605068	chr12:41605068:A:G	rs441162	A	G	a	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	41862352	41862353	chr12:41862353:A:T	rs2079902	A	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr12	41941024	41941025	chr12:41941025:A:G	rs11181267	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	42335604	42335605	chr12:42335605:C:T	rs3810793	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr12	42343936	42343937	chr12:42343937:A:G	rs58826545	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	42369945	42369946	chr12:42369946:G:C	rs754012	G	C	C	Hoxc9_MA0485.1	12	1	-	9.121048428706384	8.402992649791505	GGCATTAAATCAC
chr12	42478302	42478303	chr12:42478303:A:G	rs1669923	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	42758829	42758830	chr12:42758830:G:T	rs11829548	G	T	G	Hoxc9_MA0485.1	1	1	-	8.271605052174266	7.85112195959588	GCCTGTAAATTAT
chr12	42758830	42758831	chr12:42758831:C:T	rs11834256	C	T	C	Hoxc9_MA0485.1	0	1	-	8.271605052174266	7.738789918883264	GCCTGTAAATTAT
chr12	42905266	42905267	chr12:42905267:A:T	rs963139599	A	T	A	Hoxc9_MA0485.1	4	1	+	9.092192537770275	5.423577295453677	TGTTATAAATCTT
chr12	42920457	42920458	chr12:42920458:A:G	rs73129823	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	43151790	43151791	chr12:43151791:T:C	rs185105067	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr12	43885376	43885377	chr12:43885377:A:C	rs192846233	A	C	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	43885407	43885408	chr12:43885408:T:C	rs2464103	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	44372456	44372457	chr12:44372457:C:T	rs60037016	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	44604622	44604623	chr12:44604623:C:T	rs2060842	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	44715079	44715080	chr12:44715080:G:A	rs4544065	G	A	G	Hoxc9_MA0485.1	0	1	+	12.071607892108101	11.538792758817099	GGCAATAAATCAG
chr12	44764031	44764032	chr12:44764032:G:A	rs11182655	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	46108082	46108083	chr12:46108083:T:G	rs10880917	T	G	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	46174104	46174105	chr12:46174105:C:G	rs7967767	C	G	G	Hoxc9_MA0485.1	2	1	+	9.172387239039615	6.476503097318306	GACAATAAATTAT
chr12	46174125	46174126	chr12:46174126:G:A	rs12426131	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	46198122	46198123	chr12:46198123:T:C	rs7954255	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	46352230	46352231	chr12:46352231:A:C	rs79502328	A	C	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr12	46387658	46387659	chr12:46387659:C:T	rs923788	C	T	C	Hoxc9_MA0485.1	1	1	-	7.962334984368202	6.40289141045814	CGGAATAAATCAA
chr12	46402644	46402645	chr12:46402645:G:A	rs12321512	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	46518048	46518049	chr12:46518049:G:T	rs996865059	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	46537926	46537927	chr12:46537927:T:A	rs17121410	T	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	46722913	46722914	chr12:46722914:T:A	chr12:46722914:T:A	T	A	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	47102554	47102555	chr12:47102555:G:A	rs2040674	G	A	A	Hoxc9_MA0485.1	1	1	+	7.588312012678523	6.028868438768462	AGCCATAAAACTG
chr12	47828923	47828924	chr12:47828924:A:C	rs112976925	A	C	A	Hoxc9_MA0485.1	8	1	+	9.234105992781998	4.383703820837339	GGCTATAAATAAG
chr12	48189747	48189748	chr12:48189748:C:T	rs571891215	C	T	C	Hoxc9_MA0485.1	1	1	-	9.134773986094615	7.575330412184554	AGCCATAAATTCC
chr12	48863818	48863819	chr12:48863819:T:A	rs4760597	T	A	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	49558997	49558998	chr12:49558998:G:A	rs191487493	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	49711853	49711854	chr12:49711854:T:C	rs12317778	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	49965682	49965683	chr12:49965683:G:A	rs1964676	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	50233056	50233057	chr12:50233057:A:C	rs758427119	A	C	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	50545933	50545934	chr12:50545934:C:T	rs137942310	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	50550748	50550749	chr12:50550749:G:T	rs77921900	G	T	G	Hoxc9_MA0485.1	0	1	+	10.49342556721612	9.438060815550365	GGACATAAATCTT
chr12	50762796	50762797	chr12:50762797:A:G	rs4768866	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	51263030	51263031	chr12:51263031:C:T	rs186477814	C	T	C	Hoxc9_MA0485.1	10	1	+	9.848479426450766	8.044643522142014	TGCAGTAAATCAG
chr12	51263032	51263033	chr12:51263033:G:C	rs1410393896	G	C	G	Hoxc9_MA0485.1	12	1	+	9.848479426450766	10.566535205365645	TGCAGTAAATCAG
chr12	51908957	51908958	chr12:51908958:C:T	rs11169951	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	51963107	51963108	chr12:51963108:A:G	rs772222	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	51967868	51967869	chr12:51967869:C:G	rs111930700	C	G	C	Hoxc9_MA0485.1	2	1	+	7.939673926041725	5.2437897843204135	GGCTGTTAATCAC
chr12	51971075	51971076	chr12:51971076:C:T	rs191661350	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	51971083	51971084	chr12:51971084:G:T	chr12:51971084:G:T	G	T	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	52033365	52033366	chr12:52033366:G:T	rs547333498	G	T	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	52033385	52033386	chr12:52033386:C:T	rs79591354	C	T	C	Hoxc9_MA0485.1	10	1	+	7.609163957678981	5.805328053370229	CTTCGTAAATCAC
chr12	52598394	52598395	chr12:52598395:T:C	rs12422469	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	52632781	52632782	chr12:52632782:T:C	rs626758	T	C	C	Hoxc9_MA0485.1	4	1	-	9.165349684641322	7.997585970649738	AGCTATAAATAAT
chr12	52641675	52641676	chr12:52641676:C:T	rs685190	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	52970229	52970230	chr12:52970230:A:G	rs7306790	A	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	52995664	52995665	chr12:52995665:G:C	rs9705954	G	C	g	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	53004713	53004714	chr12:53004714:A:T	rs114510852	A	T	A	Hoxc9_MA0485.1	6	1	+	8.546437930846547	5.017713465309028	TGCCTTAAATCAT
chr12	53171429	53171430	chr12:53171430:A:G	rs767048688	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	53327666	53327667	chr12:53327667:A:C	rs112778209	A	C	A	Hoxc9_MA0485.1	7	1	+	10.731830812949676	3.8276017437441	GGCAATAAATTAT
chr12	53671173	53671174	chr12:53671174:C:A	rs4759280	C	A	A	Hoxc9_MA0485.1	6	1	-	9.601956339061406	9.107437640033309	GGCTATGAATCAC
chr12	53695174	53695175	chr12:53695175:C:T	rs138583677	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	53709292	53709293	chr12:53709293:C:T	rs58995234	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	53709340	53709341	chr12:53709341:C:G	rs78005218	C	G	c	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	53727758	53727759	chr12:53727759:T:C	rs79326490	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	53727800	53727801	chr12:53727801:A:G	rs78404378	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr12	53770495	53770496	chr12:53770496:T:C	chr12:53770496:T:C	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	54052246	54052247	chr12:54052247:T:A	chr12:54052247:T:A	T	A	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	54052247	54052248	chr12:54052248:G:A	chr12:54052248:G:A	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	54081412	54081413	chr12:54081413:C:G	rs115895351	C	G	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	54081420	54081421	chr12:54081421:A:G	rs1968896	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	54112466	54112467	chr12:54112467:G:A	rs143536658	G	A	-	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr12	54133682	54133683	chr12:54133683:C:G	rs4759343	C	G	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	54133700	54133701	chr12:54133701:C:T	rs554404203	C	T	C	Hoxc9_MA0485.1	3	1	+	8.186770002730189	7.298517229707564	GCCCGTCAATCTC
chr12	54134660	54134661	chr12:54134661:G:A	rs10161544	G	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr12	54353505	54353506	chr12:54353506:G:A	rs118003468	G	A	G	Hoxc9_MA0485.1	12	1	-	11.089084823740395	10.835087869975842	AGCAGTAAATCAC
chr12	54359190	54359191	chr12:54359191:C:G	rs571763213	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	54359195	54359196	chr12:54359196:C:A	rs114239968	C	A	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	54359198	54359199	chr12:54359199:G:C	rs557598661	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	54359327	54359328	chr12:54359328:G:A	chr12:54359328:G:A	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	54394410	54394411	chr12:54394411:T:C	rs73322224	T	C	T	Hoxc9_MA0485.1	10	1	+	7.950608577163369	9.75444448147212	TCCCATAAATTTG
chr12	54448557	54448558	chr12:54448558:C:T	rs1309192698	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	54651052	54651053	chr12:54651053:A:T	rs7296446	A	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	54651054	54651055	chr12:54651055:A:T	rs7296448	A	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	54683967	54683968	chr12:54683968:C:T	rs1107740	C	T	C	Hoxc9_MA0485.1	12	1	+	7.904662577748234	7.650665623983683	AGCTGTCAATCTC
chr12	54698589	54698590	chr12:54698590:A:T	rs12316925	A	T	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr12	54744722	54744723	chr12:54744723:C:T	rs7296402	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	55001561	55001562	chr12:55001562:T:A	rs77879814	T	A	T	Hoxc9_MA0485.1	3	1	-	9.568910102132316	9.415408536680161	GGCAGTAAATCCC
chr12	55333332	55333333	chr12:55333333:C:T	rs7959457	C	T	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	55656783	55656784	chr12:55656784:A:G	rs73117248	A	G	A	Hoxc9_MA0485.1	2	1	+	8.466886833947402	7.690405664629847	TTACATAAATCAC
chr12	55662371	55662372	chr12:55662372:T:C	rs10876848	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	55666906	55666907	chr12:55666907:C:T	rs78874486	C	T	C	Hoxc9_MA0485.1	0	1	-	9.568910102132316	9.036094968841313	GGCAGTAAATCCC
chr12	55713986	55713987	chr12:55713987:G:A	rs7975919	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	55799448	55799449	chr12:55799449:A:C	rs11171681	A	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr12	56632123	56632124	chr12:56632124:A:C	rs59333125	A	C	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	56688675	56688676	chr12:56688676:G:T	rs1169219170	G	T	G	Hoxc9_MA0485.1	0	1	+	8.207960036395209	7.152595284729457	GGGAGTAAATCAG
chr12	57159215	57159216	chr12:57159216:C:T	rs34505337	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr12	57317545	57317546	chr12:57317546:G:A	rs112639655	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	57521830	57521831	chr12:57521831:G:A	chr12:57521831:G:A	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	57642722	57642723	chr12:57642723:A:G	rs774888	A	G	G	Hoxc9_MA0485.1	5	1	-	6.936735585153697	2.4514242225152105	GGGCATGAATCTC
chr12	57834804	57834805	chr12:57834805:C:G	rs7489290	C	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	58067980	58067981	chr12:58067981:G:A	rs1580977	G	A	G	Hoxc9_MA0485.1	12	1	+	8.13553428708855	8.00985393025508	TACTGTAAATCAG
chr12	58917040	58917041	chr12:58917041:A:C	rs55978318	A	C	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	58917612	58917613	chr12:58917613:C:G	rs11172822	C	G	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	58926674	58926675	chr12:58926675:T:C	rs7969722	T	C	T	Hoxc9_MA0485.1	8	1	-	9.519169031441836	2.6172105213068755	TGGCATAAATCAT
chr12	59339122	59339123	chr12:59339123:C:T	rs9668852	C	T	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	59426046	59426047	chr12:59426047:C:T	rs17122517	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	59643364	59643365	chr12:59643365:G:A	rs17122770	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	59699754	59699755	chr12:59699755:T:G	rs11173115	T	G	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	59725796	59725797	chr12:59725797:G:A	chr12:59725797:G:A	G	A	C	Hoxc9_MA0485.1	0	1	+	8.486544236876922	7.953729103585922	GCTCATAAATTAG
chr12	59725796	59725797	chr12:59725797:G:C	rs1795885	G	C	C	Hoxc9_MA0485.1	0	1	+	8.486544236876922	7.198835827691801	GCTCATAAATTAG
chr12	59859085	59859086	chr12:59859086:C:T	rs4623939	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	60036658	60036659	chr12:60036659:G:T	rs2886151	G	T	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	60140801	60140802	chr12:60140802:T:G	rs11173338	T	G	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	60158895	60158896	chr12:60158896:T:C	rs4758855	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	60290719	60290720	chr12:60290720:C:A	rs11173389	C	A	c	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	60488209	60488210	chr12:60488210:C:G	rs57389490	C	G	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr12	60594393	60594394	chr12:60594394:G:A	rs61925033	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	60872849	60872850	chr12:60872850:C:T	rs73118843	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr12	60997886	60997887	chr12:60997887:A:G	rs2690347	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	60997887	60997888	chr12:60997888:C:A	rs2690346	C	A	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	60997919	60997920	chr12:60997920:T:C	rs572263051	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr12	61394208	61394209	chr12:61394209:G:A	rs11173952	G	A	A	Hoxc9_MA0485.1	2	1	-	9.796360163616189	8.419341686454967	AGCTATAAATCCT
chr12	61713305	61713306	chr12:61713306:T:C	rs7397342	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	62013291	62013292	chr12:62013292:G:T	rs140780788	G	T	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	62217478	62217479	chr12:62217479:A:G	rs10219761	A	G	G	Hoxc9_MA0485.1	5	1	-	7.912930092479393	3.4276187298409067	GTCCATTAATCAC
chr12	62471510	62471511	chr12:62471511:G:A	rs12810119	G	A	G	Hoxc9_MA0485.1	1	1	-	8.821649952593445	7.877850113348581	ACACATAAATCTT
chr12	62520506	62520507	chr12:62520507:G:T	rs12298863	G	T	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	62527169	62527170	chr12:62527170:A:G	rs7964791	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	62601559	62601560	chr12:62601560:G:A	rs4763180	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	62646829	62646830	chr12:62646830:C:T	rs12317552	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	62650575	62650576	chr12:62650576:G:A	rs4763186	G	A	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	62656114	62656115	chr12:62656115:G:A	rs139003319	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	62702506	62702507	chr12:62702507:C:T	rs7358547	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	62702511	62702512	chr12:62702512:T:A	rs6581458	T	A	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	62712927	62712928	chr12:62712928:G:A	rs4763192	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	62715123	62715124	chr12:62715124:G:A	rs3843661	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	62717271	62717272	chr12:62717272:C:G	rs73312424	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	62818394	62818395	chr12:62818395:G:A	rs589637	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr12	62835181	62835182	chr12:62835182:A:C	rs73135681	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	63045872	63045873	chr12:63045873:T:C	rs112085829	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr12	63110055	63110056	chr12:63110056:T:A	rs10877956	T	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	63110065	63110066	chr12:63110066:C:T	rs10877957	C	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	63260662	63260663	chr12:63260663:A:C	rs74100823	A	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr12	63320566	63320567	chr12:63320567:A:G	rs11174933	A	G	A	Hoxc9_MA0485.1	4	1	+	9.134667749353278	7.966904035361697	GTCCATAAATCCT
chr12	63326596	63326597	chr12:63326597:C:T	rs1146117	C	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	63362865	63362866	chr12:63362866:G:C	rs34913063	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	63480114	63480115	chr12:63480115:G:A	rs1733676	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	63529060	63529061	chr12:63529061:T:C	rs12319507	T	C	t	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	63699158	63699159	chr12:63699159:G:C	rs61934540	G	C	g	Hoxc9_MA0485.1	10	1	-	8.030721370004967	3.2296505622576874	ACAAGTAAATCAC
chr12	63885522	63885523	chr12:63885523:C:G	rs142456332	C	G	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	64036632	64036633	chr12:64036633:C:A	rs111287280	C	A	C	Hoxc9_MA0485.1	11	1	+	9.667589119385616	11.720578974284697	GGCCATAAATTCC
chr12	64056614	64056615	chr12:64056615:C:A	rs1162788	C	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	64269228	64269229	chr12:64269229:G:A	rs7313429	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr12	64549441	64549442	chr12:64549442:T:A	rs7970071	T	A	T	Hoxc9_MA0485.1	7	1	-	8.994010567664294	3.7981593587477187	AGTAGTAAATCAG
chr12	64666114	64666115	chr12:64666115:C:T	rs7959471	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	64682854	64682855	chr12:64682855:C:A	rs867281485	C	A	C	Hoxc9_MA0485.1	10	1	+	8.139203728254532	5.455203394380583	AGGAGTAAATCAT
chr12	65025453	65025454	chr12:65025454:C:A	rs7980071	C	A	C	Hoxc9_MA0485.1	12	1	+	8.109113470608335	7.265377334859988	GCCAATAAATATC
chr12	65494900	65494901	chr12:65494901:A:G	rs187511126	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	65494912	65494913	chr12:65494913:T:G	rs10784469	T	G	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	65511345	65511346	chr12:65511346:C:T	rs79487293	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr12	65532487	65532488	chr12:65532488:C:G	rs117819820	C	G	C	Hoxc9_MA0485.1	1	1	+	8.810901247736671	9.949861729068344	ACCAATAAATCCT
chr12	65533818	65533819	chr12:65533819:C:A	rs116102984	C	A	c	Hoxc9_MA0485.1	10	1	+	10.890562783608878	8.206562449734928	TGCAATAAATCAA
chr12	65593708	65593709	chr12:65593709:A:C	rs4307765	A	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	65950113	65950114	chr12:65950114:C:A	rs76456255	C	A	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr12	66164353	66164354	chr12:66164354:G:T	rs113561300	G	T	G	Hoxc9_MA0485.1	0	1	+	11.471425023694367	10.416060272028615	GGCCATAAATCCC
chr12	66499151	66499152	chr12:66499152:T:A	rs987562	T	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	66600708	66600709	chr12:66600709:G:T	rs6581706	G	T	G	Hoxc9_MA0485.1	2	1	-	10.45290639668189	8.533503424278136	GTCAATAAATCAT
chr12	66695549	66695550	chr12:66695550:G:A	rs716226	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	66742149	66742150	chr12:66742150:T:C	rs762255210	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	67277380	67277381	chr12:67277381:A:T	rs766784488	A	T	A	Hoxc9_MA0485.1	9	1	-	8.611829094370341	4.784186525870315	GTTAATAAATCAG
chr12	67430774	67430775	chr12:67430775:G:A	rs73140712	G	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	67434859	67434860	chr12:67434860:C:T	rs2870936	C	T	C	Hoxc9_MA0485.1	4	1	-	7.645437576373619	8.813201290365203	GCCTGTAAATAAC
chr12	67434873	67434874	chr12:67434874:G:C	rs56719903	G	C	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	67506608	67506609	chr12:67506609:G:T	rs73128389	G	T	G	Hoxc9_MA0485.1	2	1	-	10.527701808155921	8.608298835752167	AGCTATAAATCTG
chr12	67811823	67811824	chr12:67811824:A:G	rs1819844	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr12	67967162	67967163	chr12:67967163:A:G	rs1548653	A	G	A	Hoxc9_MA0485.1	4	1	+	8.310004925607105	7.142241211615522	CCCAATAAATCCC
chr12	68100450	68100451	chr12:68100451:C:T	rs55859520	C	T	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr12	68259486	68259487	chr12:68259487:A:G	rs1044885942	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	68264253	68264254	chr12:68264254:A:G	rs756213	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	68264754	68264755	chr12:68264755:G:A	rs10878798	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr12	68429059	68429060	chr12:68429060:A:G	rs17105481	A	G	A	Hoxc9_MA0485.1	8	1	+	7.507977769127164	0.606019258992204	TGCAATCAATCCC
chr12	68529581	68529582	chr12:68529582:A:G	rs2468429	A	G	A	Hoxc9_MA0485.1	8	1	+	9.083120222966064	2.1811617128311065	GGACATAAATTAG
chr12	68531091	68531092	chr12:68531092:T:C	rs2584097	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	68983212	68983213	chr12:68983213:C:G	rs10878884	C	G	G	Hoxc9_MA0485.1	0	1	+	9.042359809858215	10.330068219043337	CTCCATAAATCTT
chr12	69006765	69006766	chr12:69006766:C:G	rs7971801	C	G	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	69053501	69053502	chr12:69053502:A:G	rs78094212	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	69056984	69056985	chr12:69056985:T:C	rs12815427	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	69225611	69225612	chr12:69225612:A:G	rs6581887	A	G	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr12	69275153	69275154	chr12:69275154:C:T	rs575627	C	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	69405701	69405702	chr12:69405702:T:C	rs150199667	T	C	T	Hoxc9_MA0485.1	4	1	-	7.540328016598168	6.372564302606585	GGGCATGAATCAT
chr12	69405708	69405709	chr12:69405709:G:T	rs138731697	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	69405718	69405719	chr12:69405719:A:G	rs79636486	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	69412146	69412147	chr12:69412147:G:A	rs7296229	G	A	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	69456477	69456478	chr12:69456478:G:A	rs11177680	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	69686894	69686895	chr12:69686895:A:G	rs183612471	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	69948174	69948175	chr12:69948175:T:C	rs7972006	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	70032221	70032222	chr12:70032222:T:C	rs578244516	T	C	T	Hoxc9_MA0485.1	12	1	-	8.563729922825742	8.689410279659212	TGCTATCAATCAA
chr12	70081107	70081108	chr12:70081108:G:A	rs3098308	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr12	70237557	70237558	chr12:70237558:C:T	rs7138424	C	T	T	Hoxc9_MA0485.1	4	1	-	10.217527479373361	11.385291193364944	AGCTGTAAATCAG
chr12	70237576	70237577	chr12:70237577:G:A	rs12819904	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr12	70753925	70753926	chr12:70753926:G:T	rs1996089	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	70812419	70812420	chr12:70812420:C:A	rs559112351	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	70812813	70812814	chr12:70812814:C:G	rs11178437	C	G	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr12	70852916	70852917	chr12:70852917:C:T	rs74102029	C	T	C	Hoxc9_MA0485.1	4	1	-	10.963693729505641	12.131457443497224	GCCCGTAAATCAT
chr12	71139841	71139842	chr12:71139842:C:T	rs79443892	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	71173175	71173176	chr12:71173176:T:C	rs1510937	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr12	71806888	71806889	chr12:71806889:A:G	rs1305734239	A	G	A	Hoxc9_MA0485.1	5	1	-	9.791571378515082	5.306260015876597	GAACATAAATCAT
chr12	71983282	71983283	chr12:71983283:G:A	rs67752672	G	A	G	Hoxc9_MA0485.1	1	1	+	8.179812740389659	6.620369166479599	GGCAATGAATCTG
chr12	72227414	72227415	chr12:72227415:C:A	rs2367895	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr12	72333937	72333938	chr12:72333938:G:A	rs3858590	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	73612818	73612819	chr12:73612819:A:G	rs77064246	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	73642542	73642543	chr12:73642543:G:C	rs2586912	G	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	74142659	74142660	chr12:74142660:C:T	rs12309949	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	74608736	74608737	chr12:74608737:G:A	rs1493815	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	74889664	74889665	chr12:74889665:A:T	rs7313553	A	T	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr12	74889704	74889705	chr12:74889705:C:T	rs79943935	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	75708352	75708353	chr12:75708353:A:C	rs12304941	A	C	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	75750787	75750788	chr12:75750788:C:T	rs148204856	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	75812347	75812348	chr12:75812348:A:T	rs74574910	A	T	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	75965815	75965816	chr12:75965816:C:T	rs180840590	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	76267310	76267311	chr12:76267311:G:A	rs1554276	G	A	g	Hoxc9_MA0485.1	11	1	-	10.938609890403367	12.134010360093425	AGCCATAAATCCC
chr12	76296295	76296296	chr12:76296296:C:T	rs10859484	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	76317200	76317201	chr12:76317201:A:G	rs940303	A	G	a	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	76461169	76461170	chr12:76461170:A:G	rs7301198	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	76511228	76511229	chr12:76511229:C:G	rs7305363	C	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	76696312	76696313	chr12:76696313:G:A	rs11115052	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	76871946	76871947	chr12:76871947:G:C	rs1011547762	G	C	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr12	77019171	77019172	chr12:77019172:A:G	rs111473453	A	G	A	Hoxc9_MA0485.1	6	1	+	10.18394399987607	7.149738233366647	AGATATAAATCAC
chr12	77102292	77102293	chr12:77102293:G:A	rs61930294	G	A	G	Hoxc9_MA0485.1	2	1	-	8.830925348954224	7.453906871793	CACAATAAATCTT
chr12	77167069	77167070	chr12:77167070:T:G	rs771628	T	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	77190142	77190143	chr12:77190143:G:A	rs73401549	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	77346184	77346185	chr12:77346185:A:G	rs11104829	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	77401970	77401971	chr12:77401971:T:C	rs11105099	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	77728286	77728287	chr12:77728287:T:C	rs151288618	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	77970999	77971000	chr12:77971000:T:G	rs11107616	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	78181807	78181808	chr12:78181808:G:C	rs300519	G	C	g	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	78181814	78181815	chr12:78181815:T:C	rs114151032	T	C	t	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	78191943	78191944	chr12:78191944:C:T	rs387311	C	T	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	78208004	78208005	chr12:78208005:G:A	rs300493	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	78888870	78888871	chr12:78888871:G:C	rs118157333	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	79056977	79056978	chr12:79056978:G:A	rs73148248	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	79174562	79174563	chr12:79174563:A:G	rs2694685	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	79725771	79725772	chr12:79725772:A:G	rs73136686	A	G	A	Hoxc9_MA0485.1	9	1	-	8.462995857729732	1.5747700433560987	GCCTATGAATCAC
chr12	80429663	80429664	chr12:80429664:T:C	rs10862111	T	C	T	Hoxc9_MA0485.1	6	1	-	9.859169747958049	6.824963981448628	GGATATAAATCTC
chr12	80446146	80446147	chr12:80446147:A:G	rs7296335	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	80678149	80678150	chr12:80678150:G:T	rs1731784	G	T	T	Hoxc9_MA0485.1	2	1	-	9.542242892276404	7.62283991987265	ACCAATAAATCTG
chr12	80749683	80749684	chr12:80749684:C:T	rs11114594	C	T	C	Hoxc9_MA0485.1	12	1	+	8.153558074484277	7.899561120719725	AGCCATGAATTAC
chr12	80749684	80749685	chr12:80749685:A:G	rs11114595	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	80863118	80863119	chr12:80863119:T:C	rs1882169	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	80913216	80913217	chr12:80913217:A:T	rs1402347	A	T	A	Hoxc9_MA0485.1	11	1	+	8.784584131335286	7.926994746126264	AACCATAAATTAA
chr12	81181915	81181916	chr12:81181916:C:T	rs12425311	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	81207846	81207847	chr12:81207847:A:G	rs10735439	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	81298041	81298042	chr12:81298042:C:T	rs12809956	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	82458438	82458439	chr12:82458439:T:G	rs74429590	T	G	T	Hoxc9_MA0485.1	0	1	-	8.700975395917995	7.946082120023874	AGTTGTAAATCTC
chr12	83084817	83084818	chr12:83084818:A:G	rs12316050	A	G	G	Hoxc9_MA0485.1	4	1	+	8.547637596894289	7.379873882902705	CTCTATAAATCAG
chr12	83084826	83084827	chr12:83084827:T:A	rs73134093	T	A	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	83197525	83197526	chr12:83197526:T:C	rs1517815	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	83347765	83347766	chr12:83347766:A:T	rs6539739	A	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	83476206	83476207	chr12:83476207:C:T	chr12:83476207:C:T	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	83476212	83476213	chr12:83476213:A:G	rs1965961	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	83562819	83562820	chr12:83562820:G:A	rs7975893	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	83865865	83865866	chr12:83865866:G:A	rs991068	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	84154670	84154671	chr12:84154671:A:G	rs10779077	A	G	a	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	84294772	84294773	chr12:84294773:T:G	rs7306299	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	84314226	84314227	chr12:84314227:A:C	rs12307352	A	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	84661782	84661783	chr12:84661783:T:C	rs10779122	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	84891442	84891443	chr12:84891443:G:A	rs2123186	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	85017244	85017245	chr12:85017245:C:T	rs12301980	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	85591998	85591999	chr12:85591999:A:G	rs2199517	A	G	G	Hoxc9_MA0485.1	8	1	+	8.298966843159295	1.3970083330243352	CCTCGTAAATCAT
chr12	85617621	85617622	chr12:85617622:C:G	rs7136236	C	G	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	85726318	85726319	chr12:85726319:T:C	rs17013316	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	85740810	85740811	chr12:85740811:A:G	rs61928659	A	G	A	Hoxc9_MA0485.1	8	1	+	8.044643522142014	1.1426850120070546	TGCAGTAAATTAG
chr12	85759134	85759135	chr12:85759135:A:G	rs10779207	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	85807924	85807925	chr12:85807925:T:C	rs7132683	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr12	86213152	86213153	chr12:86213153:A:G	rs61949006	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	86660832	86660833	chr12:86660833:C:A	rs1469383	C	A	C	Hoxc9_MA0485.1	1	1	-	10.862741574990194	8.779981254413656	TGCTATAAATCAG
chr12	86883234	86883235	chr12:86883235:C:A	rs138268075	C	A	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	86892603	86892604	chr12:86892604:G:T	rs10858518	G	T	G	Hoxc9_MA0485.1	3	1	-	7.194285939128391	6.459534731557922	CGCCGTCAATCTA
chr12	87315095	87315096	chr12:87315096:C:T	rs7966191	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	87315106	87315107	chr12:87315107:T:C	rs7952911	T	C	T	Hoxc9_MA0485.1	8	1	-	8.964529138595022	2.0625706284600622	TTCCGTAAATCAT
chr12	87337112	87337113	chr12:87337113:T:C	rs78000293	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	87662021	87662022	chr12:87662022:T:C	rs78446050	T	C	T	Hoxc9_MA0485.1	8	1	-	10.46276217940252	3.56080366926756	GGATATAAATCAT
chr12	87995848	87995849	chr12:87995849:T:A	chr12:87995849:T:A	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr12	88877610	88877611	chr12:88877611:T:C	rs1440709255	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	88896890	88896891	chr12:88896891:G:A	rs416149	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr12	89231102	89231103	chr12:89231103:G:T	rs10506968	G	T	G	Hoxc9_MA0485.1	0	1	+	9.744216691773817	8.688851940108062	GATCATAAATCAA
chr12	89238716	89238717	chr12:89238717:C:T	rs4842485	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	89253901	89253902	chr12:89253902:T:C	rs17354345	T	C	T	Hoxc9_MA0485.1	5	1	+	8.567721629666217	4.082410267027731	ACCCATCAATCTT
chr12	89384857	89384858	chr12:89384858:A:G	rs34663878	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	89825845	89825846	chr12:89825846:T:C	rs79745607	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	89969376	89969377	chr12:89969377:C:T	rs73351975	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	89993104	89993105	chr12:89993105:G:A	rs17192551	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	90292440	90292441	chr12:90292441:G:A	rs7953788	G	A	g	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr12	90399491	90399492	chr12:90399492:C:T	rs1384603	C	T	C	Hoxc9_MA0485.1	10	1	+	9.899949195067238	8.096113290758487	CTCCATAAATCAT
chr12	90448192	90448193	chr12:90448193:A:C	rs11105620	A	C	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	90532012	90532013	chr12:90532013:T:A	rs4465421	T	A	A	Hoxc9_MA0485.1	12	1	+	8.873954935825003	8.284215753841206	AGGCGTAAATCAT
chr12	90532016	90532017	chr12:90532017:A:G	rs4283051	A	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	90622365	90622366	chr12:90622366:G:A	rs2520500	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	90990843	90990844	chr12:90990844:A:G	rs1920765	A	G	G	Hoxc9_MA0485.1	2	1	-	9.21831996086433	10.595338438025554	TCTAATAAATCAC
chr12	91098716	91098717	chr12:91098717:G:A	chr12:91098717:G:A	G	A	G	Hoxc9_MA0485.1	2	1	-	9.819673510289244	8.442655033128021	CACCATAAATCTC
chr12	91127511	91127512	chr12:91127512:C:T	rs111581932	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	91239958	91239959	chr12:91239959:T:C	chr12:91239959:T:C	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	91332573	91332574	chr12:91332574:G:A	rs7486914	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr12	91370277	91370278	chr12:91370278:C:A	rs11106115	C	A	c	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	91579585	91579586	chr12:91579586:G:A	rs7962133	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	91579588	91579589	chr12:91579589:G:T	rs73218614	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	91664094	91664095	chr12:91664095:G:A	rs12307942	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	91690976	91690977	chr12:91690977:T:A	rs9634203	T	A	T	Hoxc9_MA0485.1	7	1	-	10.612033866681143	5.41618265776457	TCCCATAAATCAG
chr12	91778801	91778802	chr12:91778802:G:T	chr12:91778802:G:T	G	T	G	Hoxc9_MA0485.1	12	1	+	8.346762616497298	8.810821441647624	TCTTATAAATCAG
chr12	91845389	91845390	chr12:91845390:A:G	rs76280667	A	G	A	Hoxc9_MA0485.1	3	1	+	8.1003534171991	3.3187081527838775	GCTAATCAATCAC
chr12	91954791	91954792	chr12:91954792:A:G	rs886466815	A	G	A	Hoxc9_MA0485.1	4	1	+	8.945273986727296	7.777510272735712	CACTATAAATCAA
chr12	91980802	91980803	chr12:91980803:T:C	rs78814084	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	92059779	92059780	chr12:92059780:C:A	rs117704523	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	92144896	92144897	chr12:92144897:G:A	rs28399538	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	92363307	92363308	chr12:92363308:T:C	chr12:92363308:T:C	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	92404162	92404163	chr12:92404163:T:C	rs972255866	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	92537692	92537693	chr12:92537693:C:T	rs7978255	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	92746397	92746398	chr12:92746398:A:G	rs78003783	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	93323269	93323270	chr12:93323270:G:A	rs11611045	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	93383199	93383200	chr12:93383200:A:C	rs10859490	A	C	C	Hoxc9_MA0485.1	3	1	-	8.317959383837387	3.6898156848743193	TGTTGTAAATCAG
chr12	93540620	93540621	chr12:93540621:C:A	rs141068737	C	A	C	Hoxc9_MA0485.1	0	1	-	8.459809879417264	7.404445127751512	GACCATAAATTTA
chr12	93544713	93544714	chr12:93544714:T:C	rs10859516	T	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	93573320	93573321	chr12:93573321:G:A	rs575617803	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	93812783	93812784	chr12:93812784:G:A	rs73222743	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	93812803	93812804	chr12:93812804:T:A	rs12299049	T	A	T	Hoxc9_MA0485.1	11	1	-	9.304567827362465	8.446978442153442	AGTTGTAAATCAT
chr12	93842678	93842679	chr12:93842679:A:G	rs17041107	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr12	93842715	93842716	chr12:93842716:G:A	rs55700143	G	A	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	93886795	93886796	chr12:93886796:A:G	rs17021672	A	G	a	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	93978665	93978666	chr12:93978666:A:T	rs115817838	A	T	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	94090369	94090370	chr12:94090370:G:A	rs722152	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	94146410	94146411	chr12:94146411:C:G	rs2242151	C	G	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr12	94428493	94428494	chr12:94428494:C:T	rs6538499	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	94428512	94428513	chr12:94428513:G:T	rs68122601	G	T	T	Hoxc9_MA0485.1	0	1	-	8.683232942477996	9.438126218372116	CGGCATAAATCTC
chr12	94490157	94490158	chr12:94490158:G:A	rs11107554	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	94790380	94790381	chr12:94790381:T:C	rs4761666	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	94798354	94798355	chr12:94798355:T:G	rs10745696	T	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	94853982	94853983	chr12:94853983:T:A	rs7312282	T	A	.	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	95073490	95073491	chr12:95073491:G:A	rs537480249	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	95372140	95372141	chr12:95372141:G:A	rs4762404	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	95417257	95417258	chr12:95417258:A:G	rs773364290	A	G	A	Hoxc9_MA0485.1	4	1	+	8.842577877412392	7.674814163420808	AACTATAAATCTA
chr12	95766397	95766398	chr12:95766398:T:C	rs10859938	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	95766616	95766617	chr12:95766617:C:T	rs12312156	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	95769519	95769520	chr12:95769520:G:A	rs11836590	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr12	95785010	95785011	chr12:95785011:C:G	rs76629482	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	95877827	95877828	chr12:95877828:C:T	rs879845	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	95877879	95877880	chr12:95877880:G:T	rs879846	G	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	96026434	96026435	chr12:96026435:T:C	rs763874	T	C	C	Hoxc9_MA0485.1	5	1	+	9.364034447835976	4.878723085197491	ACTCATAAATCTT
chr12	96041049	96041050	chr12:96041050:A:G	rs17025123	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	96072879	96072880	chr12:96072880:G:C	rs77177460	G	C	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr12	96402410	96402411	chr12:96402411:T:C	rs577813174	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr12	96489808	96489809	chr12:96489809:C:T	rs555535124	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	96520834	96520835	chr12:96520835:A:G	rs17316068	A	G	A	Hoxc9_MA0485.1	6	1	+	8.437234835061089	5.40302906855167	GACCATAAATAAA
chr12	96649128	96649129	chr12:96649129:C:T	rs10507075	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	97185783	97185784	chr12:97185784:C:G	rs3843653	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	97373975	97373976	chr12:97373976:C:A	rs79917200	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr12	97456842	97456843	chr12:97456843:T:A	rs1017610518	T	A	T	Hoxc9_MA0485.1	1	1	+	8.674231562355663	9.19754830902214	ATTCATAAATCTC
chr12	97566282	97566283	chr12:97566283:C:T	rs17334962	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	97902242	97902243	chr12:97902243:C:G	rs12229056	C	G	C	Hoxc9_MA0485.1	12	1	+	8.453227739500143	7.735171960585265	GAAAATAAATCTC
chr12	98502723	98502724	chr12:98502724:G:A	rs3825263	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	98868777	98868778	chr12:98868778:G:A	rs201370	G	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	98999589	98999590	chr12:98999590:T:C	rs7965027	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	98999621	98999622	chr12:98999622:G:T	rs7978587	G	T	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr12	99018094	99018095	chr12:99018095:T:C	rs61933365	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr12	99383781	99383782	chr12:99383782:G:A	rs7315074	G	A	G	Hoxc9_MA0485.1	0	1	+	8.56353650329597	8.030721370004967	GCAAGTAAATCAC
chr12	99759097	99759098	chr12:99759098:T:G	rs4132669	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	100234285	100234286	chr12:100234286:C:T	rs77872999	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	100360174	100360175	chr12:100360175:A:G	rs34351561	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	100375789	100375790	chr12:100375790:A:T	rs73374485	A	T	A	Hoxc9_MA0485.1	7	1	+	8.01308369266214	2.8172324837455656	TGCCGTGAATCAT
chr12	100447801	100447802	chr12:100447802:C:T	rs76183978	C	T	C	Hoxc9_MA0485.1	0	1	-	8.167105447354366	7.634290314063363	GGGCATAAATTTC
chr12	100491328	100491329	chr12:100491329:G:A	rs4764980	G	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	100716286	100716287	chr12:100716287:A:G	rs61946502	A	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	101156397	101156398	chr12:101156398:T:C	rs2279834	T	C	t	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	101230697	101230698	chr12:101230698:T:C	rs117662513	T	C	t	Hoxc9_MA0485.1	4	1	-	8.050355354619944	6.88259164062836	GGCAACAAATCAT
chr12	101581361	101581362	chr12:101581362:A:C	rs11110867	A	C	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr12	101624195	101624196	chr12:101624196:A:G	rs825067	A	G	G	Hoxc9_MA0485.1	6	1	+	9.195231066514603	6.161025300005179	CCCAGTAAATCAC
chr12	101783542	101783543	chr12:101783543:G:C	rs10860785	G	C	G	Hoxc9_MA0485.1	1	1	+	10.737061218156724	9.598100736825051	TGCTATAAATCAA
chr12	101823763	101823764	chr12:101823764:G:C	rs80220064	G	C	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	102298305	102298306	chr12:102298306:C:T	rs2971583	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr12	102564040	102564041	chr12:102564041:A:C	rs855206	A	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	102745895	102745896	chr12:102745896:T:C	rs10507150	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	102962239	102962240	chr12:102962240:A:G	rs1052774453	A	G	A	Hoxc9_MA0485.1	4	1	+	10.15394614883179	8.986182434840206	CTCCATAAATCAC
chr12	103044017	103044018	chr12:103044018:G:A	rs17041417	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	103379661	103379662	chr12:103379662:G:A	rs73185877	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	103580853	103580854	chr12:103580854:A:G	rs17494141	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr12	103767705	103767706	chr12:103767706:T:C	rs79261387	T	C	-	Hoxc9_MA0485.1	8	1	-	7.557968921956568	0.6560104118216084	GCAAATCAATCAC
chr12	103794606	103794607	chr12:103794607:C:G	rs7312606	C	G	G	Hoxc9_MA0485.1	1	1	-	8.91292322885832	7.773962747526645	GGATATAAATTAC
chr12	103838494	103838495	chr12:103838495:A:T	rs76169521	A	T	A	Hoxc9_MA0485.1	6	1	+	10.190783645811031	6.662059180273514	ATCCATAAATCAG
chr12	103861440	103861441	chr12:103861441:A:G	rs12815289	A	G	A	Hoxc9_MA0485.1	5	1	-	9.064818395412177	4.579507032773688	TCTTATAAATCAC
chr12	103933212	103933213	chr12:103933213:A:G	rs1920413	A	G	G	Hoxc9_MA0485.1	8	1	+	9.187978947070611	2.286020436935652	GAACATAAATCTC
chr12	103951474	103951475	chr12:103951475:A:G	rs11111854	A	G	A	Hoxc9_MA0485.1	12	1	+	9.086726879300127	9.212407236133597	TGCAATAAATTAA
chr12	103991669	103991670	chr12:103991670:A:G	rs2583274	A	G	G	Hoxc9_MA0485.1	4	1	+	10.232982395912416	9.065218681920834	GACTATAAATCAA
chr12	104084102	104084103	chr12:104084103:G:A	rs80283150	G	A	G	Hoxc9_MA0485.1	10	1	-	8.044196184042379	6.240360279733628	AGCTGTCAATCAG
chr12	104262347	104262348	chr12:104262348:G:A	rs4964735	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	104288262	104288263	chr12:104288263:A:G	rs12302458	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	104301082	104301083	chr12:104301083:C:T	rs4964779	C	T	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	104368899	104368900	chr12:104368900:T:C	rs4964788	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	104423424	104423425	chr12:104423425:A:G	rs2468906	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr12	104593053	104593054	chr12:104593054:G:T	rs7954312	G	T	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr12	104689290	104689291	chr12:104689291:A:G	rs58731514	A	G	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	104955545	104955546	chr12:104955546:A:G	rs78612656	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	104957485	104957486	chr12:104957486:A:G	rs576091141	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	105085783	105085784	chr12:105085784:G:A	rs6539191	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	105109637	105109638	chr12:105109638:T:G	rs17036655	T	G	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	105289284	105289285	chr12:105289285:A:G	rs10861380	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	105513132	105513133	chr12:105513133:G:A	rs77393523	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	105562913	105562914	chr12:105562914:G:A	rs2694398	G	A	G	Hoxc9_MA0485.1	0	1	+	8.15565505316365	7.62283991987265	GCAAATAAATCTG
chr12	105864970	105864971	chr12:105864971:T:C	rs7963923	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	105920266	105920267	chr12:105920267:G:A	rs7132142	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	105948345	105948346	chr12:105948346:T:C	rs61942471	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	105981954	105981955	chr12:105981955:C:T	rs2569972	C	T	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	106030753	106030754	chr12:106030754:G:A	rs76355102	G	A	G	Hoxc9_MA0485.1	4	1	+	8.87117239002574	10.038936104017322	AGTCGTAAATCTG
chr12	106075392	106075393	chr12:106075393:C:T	rs934085	C	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	106774224	106774225	chr12:106774225:C:A	rs3759312	C	A	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	107145534	107145535	chr12:107145535:T:A	rs76807028	T	A	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	107546136	107546137	chr12:107546137:G:T	rs150972954	G	T	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	107635408	107635409	chr12:107635409:C:A	rs73187339	C	A	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	107823095	107823096	chr12:107823096:T:C	rs7488632	T	C	t	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	107885149	107885150	chr12:107885150:T:A	rs11113566	T	A	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	108130260	108130261	chr12:108130261:G:T	rs11113750	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr12	108130292	108130293	chr12:108130293:G:A	rs74401555	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	108344766	108344767	chr12:108344767:G:A	rs8181629	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	108365665	108365666	chr12:108365666:G:T	rs1089941	G	T	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	108374735	108374736	chr12:108374736:G:T	rs117269689	G	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr12	108374736	108374737	chr12:108374737:G:A	rs966854605	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	108444586	108444587	chr12:108444587:A:G	rs10861922	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr12	108449576	108449577	chr12:108449577:C:T	rs76824678	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	108482651	108482652	chr12:108482652:G:A	rs75265082	G	A	G	Hoxc9_MA0485.1	3	1	-	9.28819574545772	8.399942972435099	TGTCATAAATTAC
chr12	108491334	108491335	chr12:108491335:A:G	rs888554	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	108547670	108547671	chr12:108547671:T:C	rs11113985	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	108563429	108563430	chr12:108563430:A:G	rs11113992	A	G	A	Hoxc9_MA0485.1	8	1	+	11.625313991179347	4.723355481044391	TGCCATAAATCAA
chr12	108723299	108723300	chr12:108723300:C:A	rs144737336	C	A	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	108935341	108935342	chr12:108935342:C:T	rs11114106	C	T	C	Hoxc9_MA0485.1	6	1	-	7.836054932109804	10.870260698619227	GGAAATGAATCAC
chr12	108948559	108948560	chr12:108948560:A:G	rs555239470	A	G	a	Hoxc9_MA0485.1	4	1	+	9.351248630752357	8.183484916760772	GCCCATGAATCAC
chr12	108955392	108955393	chr12:108955393:T:C	rs139547980	T	C	t	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	109278525	109278526	chr12:109278526:G:A	rs11066073	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	109622092	109622093	chr12:109622093:G:A	rs78719719	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr12	109631076	109631077	chr12:109631077:G:A	rs80345566	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr12	109734327	109734328	chr12:109734328:C:T	rs4766484	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	110718141	110718142	chr12:110718142:C:T	rs10774603	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	110750976	110750977	chr12:110750977:G:A	rs73194043	G	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	110934283	110934284	chr12:110934284:G:A	rs185941430	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	111181473	111181474	chr12:111181474:G:A	rs114481092	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	111216770	111216771	chr12:111216771:A:G	rs7298386	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr12	111608671	111608672	chr12:111608672:T:C	rs2339818	T	C	t	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	111767533	111767534	chr12:111767534:A:G	chr12:111767534:A:G	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	111825597	111825598	chr12:111825598:G:A	rs7137270	G	A	g	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	112177977	112177978	chr12:112177978:T:A	rs2037745	T	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	112322669	112322670	chr12:112322670:T:G	rs11066257	T	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	112424252	112424253	chr12:112424253:T:G	rs548320888	T	G	T	Hoxc9_MA0485.1	8	1	-	7.149653207654866	2.2992510357102067	AGCCTTCAATCAC
chr12	112587776	112587777	chr12:112587777:A:G	rs66729304	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr12	112751111	112751112	chr12:112751112:A:G	rs118182067	A	G	A	Hoxc9_MA0485.1	3	1	+	8.616497423181887	3.8348521587666635	GCCAATGAATCAC
chr12	112926116	112926117	chr12:112926117:A:C	rs6489869	A	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr12	112926166	112926167	chr12:112926167:G:A	rs6489870	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	112988374	112988375	chr12:112988375:G:A	rs2040807	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	112996712	112996713	chr12:112996713:A:G	rs1635142	A	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	113058507	113058508	chr12:113058508:C:T	rs1732785	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	113110353	113110354	chr12:113110354:G:A	rs1824276	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr12	113130725	113130726	chr12:113130726:G:A	rs113003385	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr12	113130771	113130772	chr12:113130772:C:A	rs2305911	C	A	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	113464809	113464810	chr12:113464810:T:C	rs115294776	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	113702662	113702663	chr12:113702663:G:T	rs11066690	G	T	T	Hoxc9_MA0485.1	2	1	-	7.942700558156851	6.023297585753096	GGCCATTAATCCC
chr12	113856213	113856214	chr12:113856214:G:C	rs11066791	G	C	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	114051256	114051257	chr12:114051257:G:A	rs11066910	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	114140141	114140142	chr12:114140142:A:C	rs16943732	A	C	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	114238664	114238665	chr12:114238665:C:T	rs1270886	C	T	C	Hoxc9_MA0485.1	0	1	-	7.586213485052295	7.0533983517612935	GCCAGTAAATCCA
chr12	114288269	114288270	chr12:114288270:G:A	rs12579617	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	114615221	114615222	chr12:114615222:G:A	rs12296971	G	A	G	Hoxc9_MA0485.1	10	1	-	8.579066346434079	6.775230442125326	AGCCATAAATCGC
chr12	114672387	114672388	chr12:114672388:T:C	rs76404097	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr12	114672765	114672766	chr12:114672766:G:T	rs567223	G	T	T	Hoxc9_MA0485.1	12	1	+	9.083120222966064	9.54717904811639	GGACATAAATTAG
chr12	114697624	114697625	chr12:114697625:T:C	rs1354156	T	C	T	Hoxc9_MA0485.1	8	1	-	7.238169790822938	0.3362112806879802	GCCAATAAATCGC
chr12	114760686	114760687	chr12:114760687:G:C	rs4767255	G	C	C	Hoxc9_MA0485.1	4	1	+	7.256823412945997	3.2866604456879216	GTCCGTCAATCAA
chr12	114760714	114760715	chr12:114760715:G:A	rs11832790	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	114768290	114768291	chr12:114768291:G:A	rs113604400	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	114851162	114851163	chr12:114851163:A:G	rs57407068	A	G	A	Hoxc9_MA0485.1	12	1	-	8.676583980502722	8.930580934267274	AGTCATAAATAAT
chr12	115160941	115160942	chr12:115160942:G:A	rs35366	G	A	A	Hoxc9_MA0485.1	2	1	-	10.876842838536348	9.499824361375124	GGCCATAAATTAA
chr12	115244571	115244572	chr12:115244572:A:G	rs185607179	A	G	A	Hoxc9_MA0485.1	11	1	-	8.255601249713783	7.060200780023725	GGTCATGAATCTC
chr12	115244621	115244622	chr12:115244622:G:A	rs73204233	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	115383505	115383506	chr12:115383506:C:T	rs10507259	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	115791208	115791209	chr12:115791209:T:C	rs12833702	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr12	115823787	115823788	chr12:115823788:C:T	rs191931152	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	116455889	116455890	chr12:116455890:A:C	rs115117194	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	116534548	116534549	chr12:116534549:A:C	rs568784237	A	C	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr12	116548089	116548090	chr12:116548090:G:C	rs10774872	G	C	C	Hoxc9_MA0485.1	10	1	-	9.247643778669671	4.446572970922394	GGTTGTAAATCAA
chr12	116562304	116562305	chr12:116562305:C:T	rs78683855	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	116819577	116819578	chr12:116819578:G:A	chr12:116819578:G:A	G	A	g	Hoxc9_MA0485.1	26	0	-	0	0	.
chr12	116819591	116819592	chr12:116819592:G:A	rs535395896	G	A	g	Hoxc9_MA0485.1	12	1	-	7.40988542486585	7.155888471101299	AGCCATTAATCCC
chr12	116819623	116819624	chr12:116819624:A:G	rs544510875	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	116853785	116853786	chr12:116853786:C:A	rs903771	C	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr12	116892677	116892678	chr12:116892678:T:C	rs10850728	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	117325645	117325646	chr12:117325646:G:A	rs12579387	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr12	117377677	117377678	chr12:117377678:C:T	rs71469801	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	117404657	117404658	chr12:117404658:C:T	rs7310750	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	117486011	117486012	chr12:117486012:A:C	rs1093310	A	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	117513344	117513345	chr12:117513345:A:G	rs4767550	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	117537979	117537980	chr12:117537980:T:C	rs7954458	T	C	C	Hoxc9_MA0485.1	9	1	+	8.039598445228084	1.151372630854452	GTCCATAAATAAG
chr12	117568077	117568078	chr12:117568078:T:C	rs816207	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	117969000	117969001	chr12:117969001:G:T	rs549886915	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	117969002	117969003	chr12:117969003:G:A	rs370002004	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	118404921	118404922	chr12:118404922:G:A	rs76672940	G	A	G	Hoxc9_MA0485.1	1	1	+	8.160791621677967	6.601348047767908	CGAAGTAAATCAT
chr12	118686156	118686157	chr12:118686157:A:G	rs2730746	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	118715808	118715809	chr12:118715809:T:C	rs2730756	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr12	119412861	119412862	chr12:119412862:C:T	rs11614625	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	119613444	119613445	chr12:119613445:G:A	rs142690684	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr12	119613463	119613464	chr12:119613464:A:G	rs2893796	A	G	A	Hoxc9_MA0485.1	3	1	+	10.152204919704348	5.370559655289127	GGAAATAAATCAG
chr12	119737985	119737986	chr12:119737986:C:T	rs2952444	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	120127383	120127384	chr12:120127384:G:A	rs2422	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	120257337	120257338	chr12:120257338:T:C	rs1151832	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	120692242	120692243	chr12:120692243:A:G	rs7306541	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	120835339	120835340	chr12:120835340:C:G	rs532703	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	120955384	120955385	chr12:120955385:C:T	rs1532594	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	120955386	120955387	chr12:120955387:G:A	rs7296416	G	A	G	Hoxc9_MA0485.1	12	1	-	7.021899771183617	6.767902817419066	CCCAGTCAATCAC
chr12	121114409	121114410	chr12:121114410:C:T	rs585847	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	121114416	121114417	chr12:121114417:G:A	rs934355	G	A	G	Hoxc9_MA0485.1	12	1	-	8.000756921824458	7.746759968059906	ATCAATCAATCAC
chr12	121184219	121184220	chr12:121184220:C:T	rs1626329	C	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	121392139	121392140	chr12:121392140:C:T	rs7961855	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	121392168	121392169	chr12:121392169:T:C	rs7976840	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr12	121415360	121415361	chr12:121415361:T:C	rs11065565	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	121743277	121743278	chr12:121743278:T:C	rs2720031	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	121792446	121792447	chr12:121792447:C:T	rs186467418	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	122350305	122350306	chr12:122350306:C:T	rs74501399	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	122423790	122423791	chr12:122423791:C:T	rs1041123358	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	122863154	122863155	chr12:122863155:C:G	rs4759438	C	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	122863156	122863157	chr12:122863157:G:T	rs535373962	G	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	122917994	122917995	chr12:122917995:A:T	rs551371420	A	T	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	123094614	123094615	chr12:123094615:C:T	rs60235187	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	123409362	123409363	chr12:123409363:T:C	rs28642812	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	123730456	123730457	chr12:123730457:A:G	rs7398851	A	G	A	Hoxc9_MA0485.1	5	1	-	8.778001991418163	4.292690628779675	AAAAATAAATCAC
chr12	123889756	123889757	chr12:123889757:G:A	rs117905946	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr12	124006981	124006982	chr12:124006982:G:C	rs1187415	G	C	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	124110947	124110948	chr12:124110948:C:T	rs10846604	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	124259363	124259364	chr12:124259364:C:T	rs12301479	C	T	C	Hoxc9_MA0485.1	0	1	+	7.968300918001243	8.200644575520611	CGTCATCAATCAG
chr12	124637788	124637789	chr12:124637789:C:T	rs74424093	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr12	124678693	124678694	chr12:124678694:C:T	rs73411243	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	124680971	124680972	chr12:124680972:C:T	rs10846708	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	124753431	124753432	chr12:124753432:G:A	rs61933425	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr12	124791240	124791241	chr12:124791241:T:C	rs34137827	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr12	124809010	124809011	chr12:124809011:G:A	rs7134858	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	124927427	124927428	chr12:124927428:A:G	rs117025451	A	G	A	Hoxc9_MA0485.1	9	1	+	7.839756049846874	4.779172803973267	GCCCATAAAACAG
chr12	124927433	124927434	chr12:124927434:T:A	rs56750915	T	A	t	Hoxc9_MA0485.1	15	0	+	0	0	.
chr12	124927434	124927435	chr12:124927435:C:T	rs79462111	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	124927442	124927443	chr12:124927443:G:A	rs150164286	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr12	125006610	125006611	chr12:125006611:A:G	rs79818898	A	G	A	Hoxc9_MA0485.1	8	1	+	7.242788333337454	0.3408298232024939	ACCCATGAATCTG
chr12	125014453	125014454	chr12:125014454:C:T	rs7977396	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr12	125014461	125014462	chr12:125014462:C:T	rs7977512	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	125105808	125105809	chr12:125105809:C:T	rs76353490	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	125105820	125105821	chr12:125105821:G:A	rs553022831	G	A	G	Hoxc9_MA0485.1	2	1	-	12.385454397261777	11.008435920100553	GCCCATAAATCAC
chr12	125105836	125105837	chr12:125105837:A:G	rs57489122	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr12	125220672	125220673	chr12:125220673:A:G	rs117952436	A	G	A	Hoxc9_MA0485.1	8	1	+	8.730512882785536	1.8285543726505766	GGCAGTCAATCAG
chr12	125220679	125220680	chr12:125220680:G:C	rs61943062	G	C	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr12	125290927	125290928	chr12:125290928:T:C	rs4765036	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr12	126061769	126061770	chr12:126061770:T:C	rs758548	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	126061816	126061817	chr12:126061817:T:C	rs758549	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr12	126316623	126316624	chr12:126316624:C:A	chr12:126316624:C:A	C	A	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	126328125	126328126	chr12:126328126:T:A	rs918041	T	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	126398016	126398017	chr12:126398017:T:G	rs79820000	T	G	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	126417620	126417621	chr12:126417621:T:C	rs12309917	T	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	126803626	126803627	chr12:126803627:T:C	rs11612526	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr12	126844161	126844162	chr12:126844162:G:A	rs1324178949	G	A	G	Hoxc9_MA0485.1	1	1	+	8.037991006389271	6.47854743247921	AGACATGAATCAC
chr12	126950372	126950373	chr12:126950373:G:C	rs1378827	G	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr12	127240620	127240621	chr12:127240621:T:C	rs78327780	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr12	127469536	127469537	chr12:127469537:A:G	rs7966510	A	G	A	Hoxc9_MA0485.1	5	1	-	10.587952827522166	6.102641464883679	GATCATAAATCAC
chr12	127623933	127623934	chr12:127623934:A:G	rs35545187	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr12	127650905	127650906	chr12:127650906:C:T	rs12821709	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr12	127889426	127889427	chr12:127889427:G:C	rs1352354	G	C	g	Hoxc9_MA0485.1	4	1	+	8.451330960499911	4.481167993241837	GGCTGTCAATCAA
chr12	127984887	127984888	chr12:127984888:T:C	rs7309559	T	C	t	Hoxc9_MA0485.1	32	0	-	0	0	.
chr12	127990941	127990942	chr12:127990942:G:A	rs55869305	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	128076359	128076360	chr12:128076360:T:C	rs10847513	T	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr12	128166604	128166605	chr12:128166605:C:G	rs2037085	C	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	128297440	128297441	chr12:128297441:C:T	rs11059634	C	T	C	Hoxc9_MA0485.1	4	1	-	8.88103964567044	10.048803359662022	ACCCGTAAATTAC
chr12	128303009	128303010	chr12:128303010:C:G	rs771275216	C	G	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr12	128524442	128524443	chr12:128524443:A:G	rs1870290	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	128776889	128776890	chr12:128776890:T:C	rs1009858	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr12	128829879	128829880	chr12:128829880:G:A	rs79640789	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr12	128891946	128891947	chr12:128891947:G:A	rs73153425	G	A	g	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr12	128948923	128948924	chr12:128948924:C:T	rs34820503	C	T	c	Hoxc9_MA0485.1	1	1	+	7.775603466628456	6.831803627383591	GCCCATGAATCTG
chr12	129016511	129016512	chr12:129016512:G:T	rs491872	G	T	t	Hoxc9_MA0485.1	14	0	-	0	0	.
chr12	129328553	129328554	chr12:129328554:G:C	rs4759445	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	129610834	129610835	chr12:129610835:G:A	rs7973346	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	129622735	129622736	chr12:129622736:A:T	rs155724	A	T	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr12	129622764	129622765	chr12:129622765:C:T	rs10847914	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	129701305	129701306	chr12:129701306:T:A	rs1567509	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr12	129772566	129772567	chr12:129772567:A:G	rs192118017	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	129890354	129890355	chr12:129890355:C:T	rs1021759	C	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr12	130013778	130013779	chr12:130013779:C:T	rs80105856	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr12	130023060	130023061	chr12:130023061:A:G	rs145916889	A	G	a	Hoxc9_MA0485.1	4	1	+	10.622712580383652	9.454948866392069	TGCAATAAATCTT
chr12	130073812	130073813	chr12:130073813:T:C	rs744912	T	C	T	Hoxc9_MA0485.1	11	1	-	9.791571378515082	5.379037979646713	GAACATAAATCAT
chr12	130073826	130073827	chr12:130073827:G:C	rs744911	G	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr12	130122557	130122558	chr12:130122558:G:A	rs75507050	G	A	g	Hoxc9_MA0485.1	16	0	+	0	0	.
chr12	130335727	130335728	chr12:130335728:T:G	chr12:130335728:T:G	T	G	t	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr12	130491851	130491852	chr12:130491852:A:G	chr12:130491852:A:G	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr12	130555668	130555669	chr12:130555669:G:A	rs78412518	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr12	130646784	130646785	chr12:130646785:G:A	rs35648761	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr12	130763574	130763575	chr12:130763575:A:G	rs73454935	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr12	130829668	130829669	chr12:130829669:T:C	rs4334059	T	C	C	Hoxc9_MA0485.1	4	1	+	7.068058573807304	5.598747134874243	GGCATTAAATCCC
chr12	131121688	131121689	chr12:131121689:T:A	rs7963230	T	A	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr12	131140388	131140389	chr12:131140389:T:C	rs3741464	T	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr12	131141760	131141761	chr12:131141761:T:C	rs7489187	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr12	131151560	131151561	chr12:131151561:T:C	rs4075564	T	C	T	Hoxc9_MA0485.1	9	1	+	9.317265960238144	2.4290401458645112	TACAATAAATCTC
chr12	131188706	131188707	chr12:131188707:G:A	rs4430590	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	131215597	131215598	chr12:131215598:T:G	chr12:131215598:T:G	T	G	-	Hoxc9_MA0485.1	18	0	+	0	0	.
chr12	131407388	131407389	chr12:131407389:T:C	rs7979822	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr12	131445940	131445941	chr12:131445941:A:G	rs12582960	A	G	N	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	131446072	131446073	chr12:131446073:C:A	rs4907458	C	A	N	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr12	131447335	131447336	chr12:131447336:T:G	rs34683442	T	G	t	Hoxc9_MA0485.1	23	0	-	0	0	.
chr12	131471970	131471971	chr12:131471971:T:C	rs10773900	T	C	N	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	131510107	131510108	chr12:131510108:G:A	rs7971947	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr12	131555710	131555711	chr12:131555711:C:T	rs113739339	C	T	T	Hoxc9_MA0485.1	3	1	+	7.763001824182385	6.8747490511597595	GACCGTGAATCAC
chr12	131555725	131555726	chr12:131555726:A:G	rs6598142	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr12	131570038	131570039	chr12:131570039:G:A	rs7314980	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr12	131599422	131599423	chr12:131599423:T:C	rs7138341	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr12	131603709	131603710	chr12:131603710:G:A	rs68185968	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	131614019	131614020	chr12:131614020:C:T	rs2398549	C	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr12	131639480	131639481	chr12:131639481:G:A	rs35951166	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr12	131735246	131735247	chr12:131735247:G:A	rs12315014	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr12	131735261	131735262	chr12:131735262:T:G	rs10902439	T	G	T	Hoxc9_MA0485.1	4	1	-	8.577983916566891	3.4400572353172345	GCGCATAAATCTT
chr12	131837004	131837005	chr12:131837005:G:A	rs11611807	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr12	131963397	131963398	chr12:131963398:C:T	rs58728522	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr12	132141414	132141415	chr12:132141415:G:A	rs34067942	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	132230693	132230694	chr12:132230694:C:T	rs915945745	C	T	c	Hoxc9_MA0485.1	32	0	+	0	0	.
chr12	132243826	132243827	chr12:132243827:C:A	rs76080820	C	A	C	Hoxc9_MA0485.1	3	1	+	8.511544254648207	7.776793047077738	ACCCGTCAATCAC
chr12	132289096	132289097	chr12:132289097:G:A	rs75237016	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr12	132289102	132289103	chr12:132289103:C:T	rs28433145	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr12	132545344	132545345	chr12:132545345:G:A	rs78410702	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr12	132842506	132842507	chr12:132842507:C:A	rs66746091	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr12	132939783	132939784	chr12:132939784:T:G	rs1298811	T	G	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr12	133212197	133212198	chr12:133212198:G:A	rs142303095	G	A	G	Hoxc9_MA0485.1	0	1	-	8.686356696916121	8.91870035443549	CGTCATCAATCAC
chr13	18594896	18594897	chr13:18594897:A:G	rs4769922	A	G	.	Hoxc9_MA0485.1	4	1	+	8.417203069737115	7.249439355745532	GGCAATTAATCAA
chr13	19618868	19618869	chr13:19618869:A:G	rs4769818	A	G	A	Hoxc9_MA0485.1	5	1	-	9.317265960238144	4.831954597599657	TACAATAAATCTC
chr13	19782800	19782801	chr13:19782801:T:A	rs9508887	T	A	T	Hoxc9_MA0485.1	4	1	-	8.852076264036917	5.18346102172032	GTCTATAAATCTA
chr13	20120103	20120104	chr13:20120104:G:A	rs117604988	G	A	G	Hoxc9_MA0485.1	3	1	-	10.218503306622447	9.330250533599825	TCCCATAAATCTT
chr13	20141471	20141472	chr13:20141472:T:C	rs141040647	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr13	20165883	20165884	chr13:20165884:G:C	rs7986635	G	C	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr13	20361181	20361182	chr13:20361182:T:C	rs116642095	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr13	20361217	20361218	chr13:20361218:A:G	rs9552153	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	20846131	20846132	chr13:20846132:G:A	rs2585901	G	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr13	20943185	20943186	chr13:20943186:C:T	rs117583926	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr13	21043866	21043867	chr13:21043867:C:A	rs17061778	C	A	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr13	21473265	21473266	chr13:21473266:C:T	rs2874196	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	21818696	21818697	chr13:21818697:T:C	rs4770203	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr13	21818702	21818703	chr13:21818703:T:C	rs12876544	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr13	21825465	21825466	chr13:21825466:C:G	rs146895923	C	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	21838320	21838321	chr13:21838321:C:G	rs17072666	C	G	C	Hoxc9_MA0485.1	0	1	+	8.142446299091857	9.43015470827698	CTCCGTAAATCAA
chr13	22114969	22114970	chr13:22114970:T:C	rs986363023	T	C	t	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr13	22114981	22114982	chr13:22114982:C:T	rs78499623	C	T	c	Hoxc9_MA0485.1	0	1	+	9.435890369916912	9.668234027436279	CTCCATAAATCAG
chr13	22163459	22163460	chr13:22163460:A:G	rs7983232	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr13	22272223	22272224	chr13:22272224:A:C	rs1275317911	A	C	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	22447968	22447969	chr13:22447969:T:A	rs76655016	T	A	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	22899919	22899920	chr13:22899920:G:A	rs116897626	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr13	22938181	22938182	chr13:22938182:G:C	rs149277430	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr13	23007540	23007541	chr13:23007541:C:T	rs9510520	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr13	23007541	23007542	chr13:23007542:G:A	rs9578524	G	A	g	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	23007552	23007553	chr13:23007553:G:A	rs4770364	G	A	G	Hoxc9_MA0485.1	3	1	-	9.770846176411784	8.882593403389158	AGCCGTAAATCCC
chr13	23128716	23128717	chr13:23128717:C:T	rs9317494	C	T	c	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr13	23179739	23179740	chr13:23179740:C:T	rs1415130	C	T	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	23427269	23427270	chr13:23427270:C:T	rs4770446	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr13	23701493	23701494	chr13:23701494:G:A	rs75330197	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	23778010	23778011	chr13:23778011:T:C	rs74038744	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr13	23932664	23932665	chr13:23932665:T:A	rs80095320	T	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	23934681	23934682	chr13:23934682:C:G	rs933440459	C	G	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr13	23991319	23991320	chr13:23991320:T:C	rs873868	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	24104391	24104392	chr13:24104392:G:C	rs7997748	G	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr13	24104405	24104406	chr13:24104406:A:G	rs17353284	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	24153761	24153762	chr13:24153762:C:T	rs4769329	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr13	24326209	24326210	chr13:24326210:A:C	rs56693520	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	24546024	24546025	chr13:24546025:G:A	rs112858409	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	24622753	24622754	chr13:24622754:G:A	rs9507381	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr13	24687689	24687690	chr13:24687690:T:C	rs1867766	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr13	24892816	24892817	chr13:24892817:T:C	rs3742165	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr13	24949141	24949142	chr13:24949142:G:A	rs149759387	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr13	25557335	25557336	chr13:25557336:G:A	rs61948629	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	25876425	25876426	chr13:25876426:A:G	rs306395	A	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr13	25974012	25974013	chr13:25974013:G:A	rs146652430	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr13	26257496	26257497	chr13:26257497:T:C	rs558824350	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	26542111	26542112	chr13:26542112:A:G	rs56055073	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr13	26583174	26583175	chr13:26583175:G:T	rs17084354	G	T	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr13	26585058	26585059	chr13:26585059:C:G	rs73166040	C	G	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr13	26668903	26668904	chr13:26668904:A:G	rs17547789	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr13	26930826	26930827	chr13:26930827:G:T	rs6491164	G	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr13	27067744	27067745	chr13:27067745:T:A	rs115808788	T	A	A	Hoxc9_MA0485.1	12	1	-	8.116738531765273	8.70647771374907	GGCAGTAAATTTA
chr13	27088828	27088829	chr13:27088829:G:T	rs74041145	G	T	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	27319606	27319607	chr13:27319607:G:A	rs7338535	G	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	27622694	27622695	chr13:27622695:G:A	rs61686087	G	A	G	Hoxc9_MA0485.1	1	1	+	10.14209163096588	8.582648057055819	GGCAATAAATTAA
chr13	27638823	27638824	chr13:27638824:A:C	rs2146583	A	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	27718948	27718949	chr13:27718949:A:G	rs9512826	A	G	G	Hoxc9_MA0485.1	12	1	-	8.657399682284517	8.91139663604907	ACCTATAAATCCT
chr13	27791227	27791228	chr13:27791228:G:C	rs187906595	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr13	27840580	27840581	chr13:27840581:C:T	rs9507964	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr13	27851807	27851808	chr13:27851808:C:A	rs9554175	C	A	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	27976872	27976873	chr13:27976873:C:T	rs9551424	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	27999410	27999411	chr13:27999411:G:C	rs36025121	G	C	C	Hoxc9_MA0485.1	0	1	-	6.988739646163367	8.276448055348489	CCCTGTAAATCCC
chr13	28013357	28013358	chr13:28013358:C:T	rs117990166	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr13	28036703	28036704	chr13:28036704:G:T	rs2491233	G	T	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr13	28084696	28084697	chr13:28084697:C:T	rs9554246	C	T	C	Hoxc9_MA0485.1	0	1	-	8.552976148296915	8.020161015005913	GGCTGTAAATTTT
chr13	28338450	28338451	chr13:28338451:A:G	chr13:28338451:A:G	A	G	A	Hoxc9_MA0485.1	11	1	-	7.999140546515237	6.8037400768251795	GCCCATTAATCTC
chr13	28466869	28466870	chr13:28466870:A:T	rs3751398	A	T	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	29175004	29175005	chr13:29175005:G:A	rs12868391	G	A	G	Hoxc9_MA0485.1	4	1	+	8.053136231115754	9.22089994510734	GTTCGTAAATCAA
chr13	29228135	29228136	chr13:29228136:C:T	rs35858036	C	T	-	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	29369547	29369548	chr13:29369548:C:G	rs9578089	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr13	29679398	29679399	chr13:29679399:C:T	rs116994014	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr13	29709687	29709688	chr13:29709688:C:T	rs79336059	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr13	29808450	29808451	chr13:29808451:G:T	rs17073905	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr13	29818512	29818513	chr13:29818513:G:C	rs17502811	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	29845463	29845464	chr13:29845464:T:G	rs9579488	T	G	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	30052603	30052604	chr13:30052604:T:C	rs9551806	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	30125564	30125565	chr13:30125565:G:A	rs471343	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	30125600	30125601	chr13:30125601:A:C	rs616352	A	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr13	30257284	30257285	chr13:30257285:G:A	rs1054438	G	A	G	Hoxc9_MA0485.1	2	1	-	10.276994099846872	8.89997562268565	ACCCATAAATCTG
chr13	30353095	30353096	chr13:30353096:C:T	rs116585145	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	30375439	30375440	chr13:30375440:A:G	rs148048540	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr13	30681637	30681638	chr13:30681638:T:G	rs61947839	T	G	T	Hoxc9_MA0485.1	11	1	-	8.07496421868714	6.021974363788061	TGTCATCAATCAA
chr13	30872658	30872659	chr13:30872659:G:A	rs146681123	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	31671090	31671091	chr13:31671091:T:G	rs73455186	T	G	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	31966701	31966702	chr13:31966702:A:T	rs73165161	A	T	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	32191646	32191647	chr13:32191647:T:G	rs809559	T	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	32197690	32197691	chr13:32197691:T:C	rs2252552	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr13	32300505	32300506	chr13:32300506:G:C	rs206130	G	C	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr13	32443401	32443402	chr13:32443402:A:G	rs143226960	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	32656980	32656981	chr13:32656981:A:G	rs113028082	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr13	32846483	32846484	chr13:32846484:G:A	rs17077939	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr13	32909155	32909156	chr13:32909156:C:T	rs2320761	C	T	C	Hoxc9_MA0485.1	0	1	-	9.853201619951697	9.320386486660695	GATAATAAATCAC
chr13	33133302	33133303	chr13:33133303:G:T	rs12584696	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr13	33133326	33133327	chr13:33133327:C:T	rs141636897	C	T	C	Hoxc9_MA0485.1	0	1	-	7.92680867249627	7.393993539205267	GGCTGTAAATATC
chr13	33139950	33139951	chr13:33139951:A:G	rs2244824	A	G	G	Hoxc9_MA0485.1	6	1	+	7.8164233214397685	4.782217554930346	GGCCATAACTCTC
chr13	33139968	33139969	chr13:33139969:A:G	rs2244825	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	33180615	33180616	chr13:33180616:C:G	rs1337834161	C	G	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr13	33268786	33268787	chr13:33268787:C:T	rs4941748	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr13	33552378	33552379	chr13:33552379:T:C	rs148523264	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	33818771	33818772	chr13:33818772:G:A	rs3135537	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr13	33997829	33997830	chr13:33997830:G:A	rs9570678	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	34003146	34003147	chr13:34003147:T:C	rs2321749	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	34003172	34003173	chr13:34003173:C:A	rs2321748	C	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr13	34161974	34161975	chr13:34161975:A:G	rs528447663	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	34361673	34361674	chr13:34361674:G:A	rs28601841	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr13	34628366	34628367	chr13:34628367:A:G	rs75730912	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr13	34733936	34733937	chr13:34733937:G:A	rs7324868	G	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr13	34822909	34822910	chr13:34822910:G:A	rs9542402	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr13	34886503	34886504	chr13:34886504:A:C	rs7988535	A	C	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr13	35260533	35260534	chr13:35260534:T:C	rs7988410	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	35716451	35716452	chr13:35716452:C:G	rs147176938	C	G	G	Hoxc9_MA0485.1	0	1	-	8.619713878313977	7.332005469128856	GCAAATAAATCTT
chr13	35761013	35761014	chr13:35761014:A:G	rs9574514	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr13	35920686	35920687	chr13:35920687:T:C	rs7333831	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	35953196	35953197	chr13:35953197:T:C	rs1343189	T	C	T	Hoxc9_MA0485.1	3	1	-	9.060055198327001	4.27840993391178	ACCAATAAATTAT
chr13	36072512	36072513	chr13:36072513:A:G	rs55949529	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr13	36147044	36147045	chr13:36147045:G:C	rs2076799	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr13	36147975	36147976	chr13:36147976:G:A	rs74788608	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	36259628	36259629	chr13:36259629:A:G	rs1170939	A	G	A	Hoxc9_MA0485.1	4	1	+	8.842911845111367	7.675148131119783	TGCAATCAATCAG
chr13	36516336	36516337	chr13:36516337:C:T	rs7330345	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr13	36526559	36526560	chr13:36526560:C:T	rs56119535	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	36677116	36677117	chr13:36677117:A:G	rs7325529	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr13	36967893	36967894	chr13:36967894:G:A	rs17054770	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	37058335	37058336	chr13:37058336:C:T	rs1199965	C	T	C	Hoxc9_MA0485.1	4	1	-	9.16619215976603	10.333955873757613	GATCGTAAATCAT
chr13	37138248	37138249	chr13:37138249:C:T	rs7985176	C	T	c	Hoxc9_MA0485.1	3	1	+	9.459925173954435	8.571672400931812	GGCCGTAAATCCA
chr13	37156175	37156176	chr13:37156176:A:G	rs73177052	A	G	-	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr13	37171956	37171957	chr13:37171957:A:G	rs1336757	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr13	37395575	37395576	chr13:37395576:C:T	rs9547836	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr13	37457766	37457767	chr13:37457767:T:C	rs61947270	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	37460453	37460454	chr13:37460454:A:G	rs78908125	A	G	A	Hoxc9_MA0485.1	5	1	-	10.048803359662022	5.5634919970235375	ACCCATAAATTAC
chr13	37460458	37460459	chr13:37460459:T:G	rs1322804	T	G	G	Hoxc9_MA0485.1	0	1	-	10.048803359662022	9.293910083767903	ACCCATAAATTAC
chr13	37485841	37485842	chr13:37485842:C:T	rs73180681	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	37747937	37747938	chr13:37747938:G:A	rs77021162	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	37890055	37890056	chr13:37890056:T:G	rs9576394	T	G	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	37982107	37982108	chr13:37982108:T:C	rs7985234	T	C	T	Hoxc9_MA0485.1	8	1	-	10.566535205365645	3.664576695230684	TGCAGTAAATCAC
chr13	38002918	38002919	chr13:38002919:C:A	rs7337322	C	A	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr13	38369255	38369256	chr13:38369256:A:G	rs7338958	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	38375338	38375339	chr13:38375339:G:A	rs2485779	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr13	38440893	38440894	chr13:38440894:C:G	rs1933361	C	G	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	39232527	39232528	chr13:39232528:G:A	rs9548697	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr13	39244963	39244964	chr13:39244964:A:G	rs4436669	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	39464041	39464042	chr13:39464042:A:C	rs7990910	A	C	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	39516543	39516544	chr13:39516544:A:G	rs1927209	A	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr13	39572250	39572251	chr13:39572251:T:C	rs912050	T	C	C	Hoxc9_MA0485.1	7	1	-	8.19052893755517	1.2862998683495925	AGCCATAAATGAC
chr13	39656437	39656438	chr13:39656438:C:G	rs147306108	C	G	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	39915570	39915571	chr13:39915571:T:C	rs35545391	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr13	39952630	39952631	chr13:39952631:C:A	rs570945330	C	A	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	40030464	40030465	chr13:40030465:T:C	rs277270	T	C	T	Hoxc9_MA0485.1	11	1	-	8.321047737040086	3.9085143381717184	GGCCACAAATCAG
chr13	40150171	40150172	chr13:40150172:C:T	rs76857265	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	40233961	40233962	chr13:40233962:G:A	rs9549125	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr13	40235320	40235321	chr13:40235321:T:G	rs60603573	T	G	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr13	40559203	40559204	chr13:40559204:T:C	rs1365846966	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	40591592	40591593	chr13:40591593:T:C	chr13:40591593:T:C	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr13	40595823	40595824	chr13:40595824:T:C	rs542084029	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	40805993	40805994	chr13:40805994:A:G	rs3783165	A	G	.	Hoxc9_MA0485.1	4	1	+	9.921556460115251	8.753792746123668	GCCTATAAATCTG
chr13	40961272	40961273	chr13:40961273:T:A	rs61963226	T	A	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr13	41062259	41062260	chr13:41062260:G:T	rs61962755	G	T	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr13	41102315	41102316	chr13:41102316:G:A	rs9566697	G	A	G	Hoxc9_MA0485.1	3	1	-	9.420656321652455	8.53240354862983	AACCGTAAATCAA
chr13	41386050	41386051	chr13:41386051:A:G	rs117256796	A	G	A	Hoxc9_MA0485.1	4	1	+	12.103346972279823	10.93558325828824	AGCTATAAATCAC
chr13	41505273	41505274	chr13:41505274:T:C	rs2770043	T	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	41531183	41531184	chr13:41531184:A:G	rs11617247	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	41666504	41666505	chr13:41666505:C:T	rs9594607	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr13	41877226	41877227	chr13:41877227:T:C	rs2069232	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr13	41961798	41961799	chr13:41961799:G:A	rs9532958	G	A	A	Hoxc9_MA0485.1	10	1	-	10.81819981913414	9.014363914825388	AGACATAAATCAT
chr13	42140336	42140337	chr13:42140337:T:C	rs4941416	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr13	42326347	42326348	chr13:42326348:G:A	rs9533066	G	A	g	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr13	42393090	42393091	chr13:42393091:G:A	rs34264781	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	42671313	42671314	chr13:42671314:C:T	rs1409075	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr13	42720420	42720421	chr13:42720421:A:T	rs9567024	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr13	42745855	42745856	chr13:42745856:T:C	chr13:42745856:T:C	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr13	42883945	42883946	chr13:42883946:G:A	chr13:42883946:G:A	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	42905756	42905757	chr13:42905757:T:C	rs7339053	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr13	42972481	42972482	chr13:42972482:C:T	rs9533322	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	43269432	43269433	chr13:43269433:G:A	rs41288327	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	43363692	43363693	chr13:43363693:T:C	rs148845235	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr13	43836532	43836533	chr13:43836533:T:C	rs9533646	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr13	43910214	43910215	chr13:43910215:C:A	rs7983109	C	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	44018028	44018029	chr13:44018029:T:C	rs116561663	T	C	T	Hoxc9_MA0485.1	3	1	+	7.618035609641338	8.506288382663964	AGCTACAAATCAC
chr13	44121233	44121234	chr13:44121234:T:C	rs6561156	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr13	44148608	44148609	chr13:44148609:A:T	rs548230653	A	T	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr13	44259586	44259587	chr13:44259587:G:T	rs61492041	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr13	44739223	44739224	chr13:44739224:G:A	rs7319194	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr13	44826837	44826838	chr13:44826838:G:T	rs149477532	G	T	t	Hoxc9_MA0485.1	3	1	-	9.68562125171823	8.950870044147761	GACCGTAAATCTT
chr13	44879766	44879767	chr13:44879767:G:T	chr13:44879767:G:T	G	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr13	45179595	45179596	chr13:45179596:C:T	rs79229473	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	45586303	45586304	chr13:45586304:A:G	rs2985950	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	45718851	45718852	chr13:45718852:T:C	rs9526103	T	C	T	Hoxc9_MA0485.1	11	1	-	9.211401558482814	4.798868159614446	AATCATAAATCAA
chr13	45809128	45809129	chr13:45809129:C:T	rs74071685	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr13	45821982	45821983	chr13:45821983:G:A	rs73472516	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr13	46354709	46354710	chr13:46354710:C:T	rs4942515	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	46469241	46469242	chr13:46469242:G:A	rs373690094	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr13	46526269	46526270	chr13:46526270:T:C	rs1326111	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	46604988	46604989	chr13:46604989:C:T	rs75117259	C	T	C	Hoxc9_MA0485.1	1	1	-	7.4043285293352765	5.844884955425216	AGGCATCAATCAG
chr13	46686705	46686706	chr13:46686706:A:G	rs842378	A	G	a	Hoxc9_MA0485.1	8	1	+	9.153469104809538	2.251510594674578	TGCTATCAATCAT
chr13	46844247	46844248	chr13:46844248:G:A	rs9534493	G	A	G	Hoxc9_MA0485.1	12	1	-	7.626318113740711	7.37232115997616	ACCCATCAATCCC
chr13	47181682	47181683	chr13:47181683:G:A	rs12428264	G	A	G	Hoxc9_MA0485.1	1	1	+	8.071946929777555	6.512503355867493	CGTAATAAATCCC
chr13	47298799	47298800	chr13:47298800:G:T	rs9591028	G	T	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr13	47481797	47481798	chr13:47481798:C:T	rs112732515	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr13	47548598	47548599	chr13:47548599:G:A	rs724706	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	47548628	47548629	chr13:47548629:G:C	rs724705	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	47700185	47700186	chr13:47700186:A:G	rs7983683	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	47891601	47891602	chr13:47891602:C:T	rs113185322	C	T	c	Hoxc9_MA0485.1	3	1	+	8.041114612008794	7.152861838986172	AGCCGTTAATCAT
chr13	47934456	47934457	chr13:47934457:T:G	rs11842190	T	G	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr13	48040302	48040303	chr13:48040303:G:T	rs9567985	G	T	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	48069475	48069476	chr13:48069476:T:C	rs9534943	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	48127463	48127464	chr13:48127464:T:A	rs9534960	T	A	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr13	48334723	48334724	chr13:48334724:T:G	rs117941632	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr13	48491187	48491188	chr13:48491188:C:T	rs7323517	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr13	48496375	48496376	chr13:48496376:G:C	rs7326934	G	C	C	Hoxc9_MA0485.1	2	1	-	8.6580839054633	5.9621997637419915	AACTGTAAATCAG
chr13	48532428	48532429	chr13:48532429:G:A	rs115217624	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	48686712	48686713	chr13:48686713:T:G	rs12853985	T	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr13	48776152	48776153	chr13:48776153:A:C	chr13:48776153:A:C	A	C	A	Hoxc9_MA0485.1	5	1	-	8.24582845162948	1.3472854759098876	GGCCGTAAATTCT
chr13	49078284	49078285	chr13:49078285:G:A	rs1359066	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr13	49098404	49098405	chr13:49098405:C:T	rs186485256	C	T	C	Hoxc9_MA0485.1	2	1	+	8.25954839670201	6.882529919540788	TGCAGTAAATCCT
chr13	49401412	49401413	chr13:49401413:T:C	rs145208545	T	C	T	Hoxc9_MA0485.1	11	1	+	8.274157968770465	7.078757499080407	AGCTGTAAATTTC
chr13	49635656	49635657	chr13:49635657:G:A	rs7326882	G	A	G	Hoxc9_MA0485.1	2	1	-	8.842911845111367	7.465893367950142	TGCAATCAATCAG
chr13	49635736	49635737	chr13:49635737:A:G	rs186040479	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr13	50353750	50353751	chr13:50353751:G:T	rs11148178	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	50353754	50353755	chr13:50353755:A:G	rs188033645	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr13	50368808	50368809	chr13:50368809:G:A	rs55901275	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr13	50469451	50469452	chr13:50469452:C:G	rs12866532	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr13	50543425	50543426	chr13:50543426:T:C	rs3116605	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	50578417	50578418	chr13:50578418:C:A	rs73485691	C	A	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr13	50578417	50578418	chr13:50578418:C:G	chr13:50578418:C:G	C	G	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr13	50757920	50757921	chr13:50757921:A:G	rs515854	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	50783656	50783657	chr13:50783657:T:C	rs17399536	T	C	C	Hoxc9_MA0485.1	4	1	-	8.454357592615036	7.286593878623455	GGCCATCAATCCA
chr13	50830208	50830209	chr13:50830209:T:C	rs17528331	T	C	T	Hoxc9_MA0485.1	8	1	-	7.971602514829814	1.069644004694855	GGCCATCAATTTG
chr13	50830231	50830232	chr13:50830232:T:A	rs7984881	T	A	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	50994138	50994139	chr13:50994139:T:C	rs2181730	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr13	51284854	51284855	chr13:51284855:C:T	rs34587119	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	51284856	51284857	chr13:51284857:G:C	rs7991849	G	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr13	51472759	51472760	chr13:51472760:C:A	rs7989674	C	A	a	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr13	51799677	51799678	chr13:51799678:G:C	rs9535761	G	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	51874817	51874818	chr13:51874818:C:T	rs750488624	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr13	51874829	51874830	chr13:51874830:C:T	rs11617792	C	T	C	Hoxc9_MA0485.1	1	1	-	9.163957176802423	7.604513602892362	AGCCATAAAACAC
chr13	51874833	51874834	chr13:51874834:G:A	rs58919798	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	52012785	52012786	chr13:52012786:T:C	rs77505745	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr13	52349536	52349537	chr13:52349537:A:G	rs61957976	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr13	52814614	52814615	chr13:52814615:A:T	rs75322133	A	T	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr13	52826961	52826962	chr13:52826962:C:T	rs666784	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr13	52880352	52880353	chr13:52880353:A:G	rs7981516	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr13	52886862	52886863	chr13:52886863:C:T	rs9596709	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	52981120	52981121	chr13:52981121:C:T	rs2226194	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	53249658	53249659	chr13:53249659:G:A	rs9596771	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr13	53451790	53451791	chr13:53451791:G:A	rs118076942	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	53593814	53593815	chr13:53593815:C:T	rs1832258	C	T	C	Hoxc9_MA0485.1	0	1	+	10.65821912608951	10.890562783608878	CGCAATAAATCAA
chr13	53638097	53638098	chr13:53638098:T:C	rs73501947	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr13	54012608	54012609	chr13:54012609:T:G	rs7987690	T	G	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr13	54464248	54464249	chr13:54464249:T:C	rs12870912	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	55272003	55272004	chr13:55272004:T:A	rs9597145	T	A	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	55667488	55667489	chr13:55667489:A:G	rs17591678	A	G	A	Hoxc9_MA0485.1	8	1	+	7.37232115997616	0.4703626498411991	ACCCATCAATCCT
chr13	57375963	57375964	chr13:57375964:T:C	rs2186032	T	C	T	Hoxc9_MA0485.1	12	1	+	8.689589662907368	8.94358661667192	GGACATAAATTTT
chr13	57612864	57612865	chr13:57612865:T:G	rs148462702	T	G	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	58085431	58085432	chr13:58085432:A:T	rs79437335	A	T	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	58086006	58086007	chr13:58086007:G:A	rs76933946	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	58727082	58727083	chr13:58727083:A:G	rs77746461	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	58850401	58850402	chr13:58850402:C:A	rs6561989	C	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr13	58919565	58919566	chr13:58919566:G:A	rs79897083	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr13	59127697	59127698	chr13:59127698:C:T	rs74084015	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr13	59359044	59359045	chr13:59359045:G:T	rs12428489	G	T	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	59456367	59456368	chr13:59456368:C:T	rs9538434	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	59484116	59484117	chr13:59484117:G:A	rs371017932	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	59644208	59644209	chr13:59644209:G:C	rs9538481	G	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr13	60162921	60162922	chr13:60162922:A:G	rs74332338	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr13	60162932	60162933	chr13:60162933:A:G	rs570081239	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	60254472	60254473	chr13:60254473:A:G	rs138676125	A	G	a	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	60269900	60269901	chr13:60269901:A:G	rs12874253	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	60355699	60355700	chr13:60355700:A:T	rs1341853	A	T	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr13	60399266	60399267	chr13:60399267:G:C	rs754361356	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr13	60441901	60441902	chr13:60441902:C:T	rs150499727	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr13	60441943	60441944	chr13:60441944:A:G	rs9528139	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	60945458	60945459	chr13:60945459:C:T	rs9570404	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr13	61890714	61890715	chr13:61890715:T:C	rs9528421	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr13	62138129	62138130	chr13:62138130:C:A	rs308646	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	62720993	62720994	chr13:62720994:G:A	rs7998961	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	63065890	63065891	chr13:63065891:G:A	rs75976170	G	A	g	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr13	63406947	63406948	chr13:63406948:A:T	rs55782740	A	T	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	63435498	63435499	chr13:63435499:C:A	rs1890901	C	A	c	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	63435532	63435533	chr13:63435533:A:G	rs1340493	A	G	g	Hoxc9_MA0485.1	28	0	+	0	0	.
chr13	63435904	63435905	chr13:63435905:T:G	rs7326081	T	G	c	Hoxc9_MA0485.1	27	0	+	0	0	.
chr13	63593492	63593493	chr13:63593493:G:A	rs75188528	G	A	G	Hoxc9_MA0485.1	1	1	+	10.390368922864283	8.830925348954224	CGCAATAAATCTT
chr13	63839162	63839163	chr13:63839163:A:G	rs2635991	A	G	.	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	64088798	64088799	chr13:64088799:T:C	rs272380	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr13	64205936	64205937	chr13:64205937:A:C	rs4591015	A	C	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr13	64223340	64223341	chr13:64223341:C:T	rs2153620	C	T	t	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	64709288	64709289	chr13:64709289:C:T	rs8002782	C	T	c	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	65400763	65400764	chr13:65400764:T:A	rs1034189	T	A	T	Hoxc9_MA0485.1	9	1	+	8.794697420073753	4.967054851573729	AAACATAAATCAG
chr13	65894319	65894320	chr13:65894320:T:C	rs1380887	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr13	66341768	66341769	chr13:66341769:A:T	rs7996220	A	T	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	66691332	66691333	chr13:66691333:C:T	rs2012246	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	67176324	67176325	chr13:67176325:T:G	rs9571727	T	G	T	Hoxc9_MA0485.1	12	1	+	11.273868058288201	10.809809233137875	GCCCATAAATCTT
chr13	67439415	67439416	chr13:67439416:A:G	rs559518315	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr13	69283475	69283476	chr13:69283476:T:G	rs7989827	T	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	69685166	69685167	chr13:69685167:G:A	rs78433360	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	69685184	69685185	chr13:69685185:C:G	rs77648238	C	G	C	Hoxc9_MA0485.1	1	1	-	8.828914694979568	7.689954213647895	GGCCGTAAATAAA
chr13	69937714	69937715	chr13:69937715:T:C	rs9592667	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr13	69946766	69946767	chr13:69946767:A:C	rs73510191	A	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	71031342	71031343	chr13:71031343:T:C	rs9592764	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr13	71049629	71049630	chr13:71049630:T:C	rs9542562	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr13	71767655	71767656	chr13:71767656:A:T	rs9572785	A	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr13	71860972	71860973	chr13:71860973:C:A	rs77379221	C	A	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	71870663	71870664	chr13:71870664:C:T	rs74096833	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr13	72244988	72244989	chr13:72244989:A:G	rs340530	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr13	72367676	72367677	chr13:72367677:A:G	rs550430	A	G	A	Hoxc9_MA0485.1	0	1	+	10.161774281655877	10.69458941494688	AGTAATAAATCAG
chr13	72367863	72367864	chr13:72367864:T:C	rs7329769	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	72412504	72412505	chr13:72412505:A:G	rs9542940	A	G	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr13	72474614	72474615	chr13:72474615:G:A	rs55973008	G	A	G	Hoxc9_MA0485.1	1	1	+	10.616332375691998	9.056888801781938	GGCAATCAATCAC
chr13	72566206	72566207	chr13:72566207:G:A	rs867157999	G	A	G	Hoxc9_MA0485.1	3	1	-	10.574566786183365	9.686314013160741	AACCATAAATCTC
chr13	72650322	72650323	chr13:72650323:T:C	rs9530053	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr13	72695310	72695311	chr13:72695311:G:A	rs9564914	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr13	72809290	72809291	chr13:72809291:C:G	rs112194511	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr13	73079742	73079743	chr13:73079743:T:C	rs4883922	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	73119415	73119416	chr13:73119416:G:A	rs61967407	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	73139309	73139310	chr13:73139310:G:A	rs7327286	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr13	73173789	73173790	chr13:73173790:C:A	rs146122698	C	A	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr13	73417546	73417547	chr13:73417547:C:T	rs12870778	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr13	73481095	73481096	chr13:73481096:C:T	rs1361058	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	73546070	73546071	chr13:73546071:T:C	rs9565013	T	C	C	Hoxc9_MA0485.1	12	1	+	8.522930717906014	8.776927671670567	CTTCATAAATCAT
chr13	73776443	73776444	chr13:73776444:A:G	rs17090402	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr13	74127837	74127838	chr13:74127838:T:C	rs17222240	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr13	74166323	74166324	chr13:74166324:T:A	rs35958790	T	A	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr13	74166353	74166354	chr13:74166354:A:T	rs11619312	A	T	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr13	74251100	74251101	chr13:74251101:C:G	rs75968373	C	G	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	74351900	74351901	chr13:74351901:A:G	rs111613728	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr13	74529018	74529019	chr13:74529019:T:C	rs9543673	T	C	T	Hoxc9_MA0485.1	4	1	-	9.251408441532611	8.083644727541028	CCCAATAAATCTT
chr13	74629253	74629254	chr13:74629254:T:C	rs11838779	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr13	74675575	74675576	chr13:74675576:T:C	rs779085310	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr13	74979830	74979831	chr13:74979831:A:G	rs1891005	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	75173844	75173845	chr13:75173845:C:T	rs114023377	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr13	75227327	75227328	chr13:75227328:A:G	rs576297502	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	75558347	75558348	chr13:75558348:A:G	rs7319441	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	75597085	75597086	chr13:75597086:A:G	rs6562916	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	75600937	75600938	chr13:75600938:G:A	rs9543992	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr13	75875407	75875408	chr13:75875408:G:C	rs9530476	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr13	75881374	75881375	chr13:75881375:G:A	rs73229981	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr13	76571366	76571367	chr13:76571367:G:A	rs962359	G	A	G	Hoxc9_MA0485.1	0	1	+	9.066424794310475	8.533609661019472	GGAAATAAATTAC
chr13	76769632	76769633	chr13:76769633:C:T	rs139252376	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr13	76770237	76770238	chr13:76770238:G:C	rs115193159	G	C	G	Hoxc9_MA0485.1	2	1	-	9.275644296065781	6.579760154344473	AACAGTAAATCAT
chr13	76801298	76801299	chr13:76801299:A:G	rs4242967	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr13	76813070	76813071	chr13:76813071:G:A	rs145385404	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr13	77152578	77152579	chr13:77152579:C:A	rs1440498929	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	77387693	77387694	chr13:77387694:A:G	rs73531766	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	77474806	77474807	chr13:77474807:C:T	rs9574070	C	T	c	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	77493118	77493119	chr13:77493119:G:T	rs629741	G	T	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	77516726	77516727	chr13:77516727:G:A	rs1407989	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	77929051	77929052	chr13:77929052:T:C	rs12720154	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	77946900	77946901	chr13:77946901:C:G	rs140035337	C	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr13	78239836	78239837	chr13:78239837:G:A	rs17745309	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr13	78290600	78290601	chr13:78290601:A:G	rs1324796	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr13	78507654	78507655	chr13:78507655:G:A	rs9544823	G	A	G	Hoxc9_MA0485.1	1	1	+	8.484444923984029	6.925001350073969	CGCCATGAATCAG
chr13	79070969	79070970	chr13:79070970:G:A	rs632193	G	A	A	Hoxc9_MA0485.1	11	1	-	8.850854323217437	10.046254792907495	GGCAGTAAATCCG
chr13	79384538	79384539	chr13:79384539:A:T	rs9530913	A	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	79692098	79692099	chr13:79692099:G:A	rs35229925	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr13	79860076	79860077	chr13:79860077:T:C	rs9530980	T	C	T	Hoxc9_MA0485.1	6	1	-	7.948481734907527	4.914275968398105	CGGAATAAATCTC
chr13	80011902	80011903	chr13:80011903:A:G	rs11620422	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr13	80360170	80360171	chr13:80360171:T:G	rs531507325	T	G	T	Hoxc9_MA0485.1	9	1	+	10.036093924822406	3.147868110448775	AGTAATAAATCAA
chr13	80878494	80878495	chr13:80878495:G:A	rs2503391	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr13	81203575	81203576	chr13:81203576:G:A	rs7998241	G	A	a	Hoxc9_MA0485.1	18	0	+	0	0	.
chr13	81583990	81583991	chr13:81583991:G:A	rs1334372	G	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	82139341	82139342	chr13:82139342:T:G	rs9546000	T	G	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr13	82673061	82673062	chr13:82673062:A:T	rs9546211	A	T	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr13	83515765	83515766	chr13:83515766:T:C	rs9593797	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	83666299	83666300	chr13:83666300:C:G	rs1331959	C	G	G	Hoxc9_MA0485.1	4	1	-	7.521646565667628	3.551483598409553	TGCTGTCAATCAG
chr13	83675605	83675606	chr13:83675606:T:G	rs2329284	T	G	G	Hoxc9_MA0485.1	0	1	-	8.715258818649007	7.960365542754886	AGCAATAAATATC
chr13	84137431	84137432	chr13:84137432:C:G	rs116099262	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr13	84463177	84463178	chr13:84463178:G:C	rs61961968	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr13	84544175	84544176	chr13:84544176:A:C	rs17078338	A	C	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr13	84544187	84544188	chr13:84544188:G:A	rs117672406	G	A	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr13	84739638	84739639	chr13:84739639:A:G	rs1526010	A	G	A	Hoxc9_MA0485.1	11	1	+	12.737602791537896	8.325069392669526	AGCCATAAATCAT
chr13	84892933	84892934	chr13:84892934:T:C	rs9546910	T	C	-	Hoxc9_MA0485.1	21	0	+	0	0	.
chr13	84894171	84894172	chr13:84894172:G:T	rs151038849	G	T	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	84901113	84901114	chr13:84901114:C:T	rs9531669	C	T	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr13	84925645	84925646	chr13:84925646:A:G	rs9565980	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr13	85283129	85283130	chr13:85283130:T:G	rs1948295	T	G	T	Hoxc9_MA0485.1	0	1	+	8.638000968264649	9.693365719930402	TCCTATAAATTAC
chr13	85349880	85349881	chr13:85349881:C:T	rs11618485	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	85543319	85543320	chr13:85543320:T:G	rs115690920	T	G	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr13	85943906	85943907	chr13:85943907:A:G	rs71442107	A	G	A	Hoxc9_MA0485.1	5	1	-	9.51638648564257	5.031075123004086	TGTCATAAATCTG
chr13	86951690	86951691	chr13:86951691:G:A	rs2685796	G	A	A	Hoxc9_MA0485.1	3	1	-	10.862989589075674	9.974736816053051	GGCCATAAATTTC
chr13	87130804	87130805	chr13:87130805:A:T	rs9524730	A	T	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	87619040	87619041	chr13:87619041:T:C	rs959536	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr13	88002294	88002295	chr13:88002295:T:A	rs2083697	T	A	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	88125513	88125514	chr13:88125514:T:C	rs7982798	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr13	88416946	88416947	chr13:88416947:G:A	rs72634755	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr13	88461602	88461603	chr13:88461603:A:G	rs338704	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr13	88605532	88605533	chr13:88605533:T:C	rs9559629	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr13	88752159	88752160	chr13:88752160:T:G	rs9555780	T	G	t	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	89634502	89634503	chr13:89634503:A:T	chr13:89634503:A:T	A	T	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr13	89663352	89663353	chr13:89663353:T:C	rs7338556	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr13	89686119	89686120	chr13:89686120:G:A	rs73593555	G	A	G	Hoxc9_MA0485.1	12	1	-	10.260298671191283	10.00630171742673	ACCAATAAATCTC
chr13	89726227	89726228	chr13:89726228:T:G	rs441429	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr13	90103402	90103403	chr13:90103403:C:A	rs2805634	C	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr13	90201514	90201515	chr13:90201515:G:C	rs115572184	G	C	G	Hoxc9_MA0485.1	0	1	+	8.27463168428939	6.986923275104271	GCCCATAAATTCT
chr13	90272415	90272416	chr13:90272416:A:C	rs1356172658	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr13	90417631	90417632	chr13:90417632:G:A	rs4540941	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	90773867	90773868	chr13:90773868:T:A	rs17666001	T	A	T	Hoxc9_MA0485.1	9	1	+	7.936531983790618	4.1088894152905935	AGCCATAAATGAT
chr13	90819974	90819975	chr13:90819975:A:G	rs9523102	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr13	90968577	90968578	chr13:90968578:G:A	rs9523213	G	A	G	Hoxc9_MA0485.1	10	1	-	9.49969105698698	7.695855152678228	TGTAATAAATCTC
chr13	91124099	91124100	chr13:91124100:T:C	rs12877375	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr13	91564834	91564835	chr13:91564835:G:A	rs7983224	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	91592257	91592258	chr13:91592258:T:C	rs9560828	T	C	T	Hoxc9_MA0485.1	7	1	-	7.70684715848778	0.8026180892822012	ACCCATGAATCTT
chr13	91622952	91622953	chr13:91622953:A:T	rs7331112	A	T	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr13	91632302	91632303	chr13:91632303:G:A	rs9515962	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	92298735	92298736	chr13:92298736:G:T	rs12859500	G	T	-	Hoxc9_MA0485.1	17	0	-	0	0	.
chr13	92402893	92402894	chr13:92402894:A:G	rs9589536	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr13	93024105	93024106	chr13:93024106:T:G	rs511722	T	G	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	93559972	93559973	chr13:93559973:G:C	rs112769327	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	93559988	93559989	chr13:93559989:T:G	rs9589767	T	G	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr13	93560000	93560001	chr13:93560001:T:C	rs115641786	T	C	T	Hoxc9_MA0485.1	4	1	-	9.89293768037555	8.725173966383966	GGCAATAAATCCA
chr13	93620708	93620709	chr13:93620709:G:C	rs4523817	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr13	94252551	94252552	chr13:94252552:G:A	rs4142200	G	A	A	Hoxc9_MA0485.1	0	1	-	7.40194988455957	7.634293542078939	CGCCATCAATTTC
chr13	94252554	94252555	chr13:94252555:A:G	rs4142201	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	94261788	94261789	chr13:94261789:G:A	rs912973	G	A	A	Hoxc9_MA0485.1	4	1	+	7.375119712579003	8.542883426570585	GGCAGTTAATCAG
chr13	94369925	94369926	chr13:94369926:C:G	rs60471954	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr13	94389722	94389723	chr13:94389723:A:G	rs4773789	A	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr13	94427655	94427656	chr13:94427656:C:T	rs9524487	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr13	94552361	94552362	chr13:94552362:A:T	rs116762039	A	T	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr13	95153743	95153744	chr13:95153744:A:G	rs4148504	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	95258858	95258859	chr13:95258859:G:A	rs2389228	G	A	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr13	95287676	95287677	chr13:95287677:T:C	rs4773872	T	C	C	Hoxc9_MA0485.1	5	1	+	10.144933810160795	5.659622447522312	GGCCATAAATTTG
chr13	95317649	95317650	chr13:95317650:C:T	rs7981674	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr13	95407658	95407659	chr13:95407659:T:A	rs12877455	T	A	T	Hoxc9_MA0485.1	11	1	-	8.387865219623622	7.5302758344146	GCTAGTAAATCAG
chr13	95554285	95554286	chr13:95554286:T:A	rs114121880	T	A	T	Hoxc9_MA0485.1	4	1	-	11.076718531660765	7.408103289344168	GACTATAAATCAC
chr13	96086011	96086012	chr13:96086012:C:A	rs9516635	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr13	96636680	96636681	chr13:96636681:A:C	rs517984	A	C	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr13	96792910	96792911	chr13:96792911:A:T	rs6491306	A	T	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	97260464	97260465	chr13:97260465:C:T	rs73555771	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	97278635	97278636	chr13:97278636:A:G	rs6491347	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr13	97360838	97360839	chr13:97360839:T:C	rs7318956	T	C	T	Hoxc9_MA0485.1	12	1	-	8.971159811205123	9.096840168038593	TGAAATAAATCAA
chr13	97537388	97537389	chr13:97537389:A:G	rs549134746	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr13	97608030	97608031	chr13:97608031:G:A	rs12853743	G	A	g	Hoxc9_MA0485.1	13	0	-	0	0	.
chr13	97880528	97880529	chr13:97880529:A:C	rs7985440	A	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr13	98169358	98169359	chr13:98169359:T:C	rs285092	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr13	98200488	98200489	chr13:98200489:G:A	rs144551012	G	A	G	Hoxc9_MA0485.1	2	1	-	7.1820872557084146	5.805068778547189	GCCCACAAATCAG
chr13	98207981	98207982	chr13:98207982:G:A	rs9517213	G	A	A	Hoxc9_MA0485.1	1	1	-	7.772761287433538	6.828961448188674	GCCAATGAATCAA
chr13	98236371	98236372	chr13:98236372:T:C	rs9582203	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	98274445	98274446	chr13:98274446:T:C	rs9517242	T	C	T	Hoxc9_MA0485.1	12	1	-	8.09658952564183	8.2222698824753	TGCCATTAATCAA
chr13	98348662	98348663	chr13:98348663:T:G	chr13:98348663:T:G	T	G	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	98502748	98502749	chr13:98502749:C:T	rs74109152	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr13	98751363	98751364	chr13:98751364:C:T	rs79818319	C	T	c	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr13	99101896	99101897	chr13:99101897:T:C	rs9517609	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr13	99182568	99182569	chr13:99182569:A:C	chr13:99182569:A:C	A	C	a	Hoxc9_MA0485.1	7	1	+	9.821478086870595	2.917249017665019	TGCCATAAATTAA
chr13	99312572	99312573	chr13:99312573:C:T	rs540484899	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr13	99331754	99331755	chr13:99331755:T:A	rs2146678	T	A	T	Hoxc9_MA0485.1	9	1	+	8.890753510638127	5.0631109421381035	GGTAATAAATTAG
chr13	99426591	99426592	chr13:99426592:T:G	rs61972486	T	G	T	Hoxc9_MA0485.1	9	1	+	8.37685407808537	1.4886282637117365	CGCTGTAAATTAC
chr13	99740102	99740103	chr13:99740103:G:A	rs7989959	G	A	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	99969065	99969066	chr13:99969066:C:T	rs187807358	C	T	C	Hoxc9_MA0485.1	12	1	+	8.15650336015495	7.902506406390399	CCCTATAAATCCC
chr13	100076109	100076110	chr13:100076110:C:T	rs9513703	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr13	100508714	100508715	chr13:100508715:G:T	rs142150669	G	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr13	100508744	100508745	chr13:100508745:C:T	rs146347384	C	T	C	Hoxc9_MA0485.1	0	1	-	7.299806271334622	6.766991138043619	GGGCATTAATCAC
chr13	100763984	100763985	chr13:100763985:T:C	rs61968932	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr13	100818056	100818057	chr13:100818057:T:G	rs75430268	T	G	T	Hoxc9_MA0485.1	7	1	-	11.35746378795412	4.453234718748545	TGCCATAAATCTT
chr13	101246065	101246066	chr13:101246066:C:T	rs9518359	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr13	101292885	101292886	chr13:101292886:G:A	rs78095277	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr13	101325433	101325434	chr13:101325434:C:T	rs496238	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr13	101655265	101655266	chr13:101655266:A:G	rs4772404	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr13	102043361	102043362	chr13:102043362:A:T	rs1926009	A	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr13	102196200	102196201	chr13:102196201:G:A	rs1336706	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr13	102724886	102724887	chr13:102724887:C:T	rs115924356	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr13	102948144	102948145	chr13:102948145:G:A	rs7983085	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr13	103007547	103007548	chr13:103007548:T:G	rs9518900	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr13	103114486	103114487	chr13:103114487:C:T	rs200415054	C	T	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	103349937	103349938	chr13:103349938:A:G	rs8002886	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr13	103349971	103349972	chr13:103349972:C:T	rs61476468	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr13	103657024	103657025	chr13:103657025:G:A	rs979298	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	103942273	103942274	chr13:103942274:C:T	rs7338367	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr13	104008117	104008118	chr13:104008118:T:G	rs369203264	T	G	T	Hoxc9_MA0485.1	0	1	+	9.096840168038593	10.152204919704348	TGAAATAAATCAG
chr13	104058048	104058049	chr13:104058049:C:T	rs9300887	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	104171559	104171560	chr13:104171560:A:G	rs2181478	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr13	104327133	104327134	chr13:104327134:A:T	rs10508143	A	T	T	Hoxc9_MA0485.1	12	1	-	10.330068219043337	9.74032903705954	GTCCATAAATCTT
chr13	104586425	104586426	chr13:104586426:A:T	rs117184061	A	T	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr13	104586457	104586458	chr13:104586458:C:T	rs115026359	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr13	104943583	104943584	chr13:104943584:C:T	rs76466462	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr13	105030340	105030341	chr13:105030341:A:T	rs7339231	A	T	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr13	105353852	105353853	chr13:105353853:G:A	rs9301023	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	105518493	105518494	chr13:105518494:A:G	rs7993194	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr13	105552210	105552211	chr13:105552211:C:T	rs551604717	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr13	105983001	105983002	chr13:105983002:C:T	rs2252003	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr13	106003091	106003092	chr13:106003092:A:G	rs1926451	A	G	A	Hoxc9_MA0485.1	3	1	-	7.903190629569182	8.791443402591804	CACTGTAAATCAG
chr13	106034406	106034407	chr13:106034407:G:A	rs61972641	G	A	G	Hoxc9_MA0485.1	1	1	+	13.524414878593449	11.964971304683388	GGCCATAAATCAC
chr13	106156388	106156389	chr13:106156389:G:A	rs9645905	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr13	106183997	106183998	chr13:106183998:G:C	rs72652612	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	106513489	106513490	chr13:106513490:C:T	rs2893261	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr13	106594890	106594891	chr13:106594891:G:A	rs9520114	G	A	G	Hoxc9_MA0485.1	12	1	-	7.731101763576125	7.477104809811574	AGACGTCAATCAC
chr13	106617715	106617716	chr13:106617716:T:A	rs6492022	T	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr13	106629157	106629158	chr13:106629158:C:G	rs9301146	C	G	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr13	106641703	106641704	chr13:106641704:C:T	rs78382782	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr13	106691863	106691864	chr13:106691864:A:T	rs6492029	A	T	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr13	107069391	107069392	chr13:107069392:T:C	rs2245300	T	C	T	Hoxc9_MA0485.1	3	1	-	10.161774281655877	5.380129017240656	AGTAATAAATCAG
chr13	107837368	107837369	chr13:107837369:T:C	rs4387466	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr13	108860389	108860390	chr13:108860390:T:G	rs196154	T	G	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr13	108893176	108893177	chr13:108893177:T:C	rs7326234	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr13	108893200	108893201	chr13:108893201:G:C	rs9559439	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr13	108972415	108972416	chr13:108972416:A:C	rs36139984	A	C	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr13	109147692	109147693	chr13:109147693:G:T	rs275943	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr13	109172168	109172169	chr13:109172169:A:G	rs9521194	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr13	109356766	109356767	chr13:109356767:C:T	rs58609658	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr13	109466792	109466793	chr13:109466793:T:A	rs61963442	T	A	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	109628541	109628542	chr13:109628542:T:C	rs117685248	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr13	109732084	109732085	chr13:109732085:C:A	rs11069802	C	A	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr13	109780685	109780686	chr13:109780686:A:T	rs1186746224	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr13	109878816	109878817	chr13:109878817:C:T	rs336216	C	T	T	Hoxc9_MA0485.1	1	1	-	11.03581006245865	9.47636648854859	GGTCATAAATCTT
chr13	109998783	109998784	chr13:109998784:C:T	rs11069818	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr13	110189805	110189806	chr13:110189806:T:G	rs3783106	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr13	110189810	110189811	chr13:110189811:T:A	rs3783105	T	A	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr13	110207274	110207275	chr13:110207275:A:T	rs12867220	A	T	A	Hoxc9_MA0485.1	4	1	+	8.977756620870387	5.30914137855379	GTCTATAAATCTG
chr13	110208513	110208514	chr13:110208514:A:G	rs9583467	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr13	110231426	110231427	chr13:110231427:C:T	rs61963281	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr13	110276390	110276391	chr13:110276391:A:T	rs7984097	A	T	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr13	110315793	110315794	chr13:110315794:A:C	rs559003227	A	C	A	Hoxc9_MA0485.1	9	1	-	8.564436543696802	1.676210729323169	ACCCATGAATCAT
chr13	110363432	110363433	chr13:110363433:C:A	rs872587	C	A	A	Hoxc9_MA0485.1	2	1	+	8.945273986727296	7.025871014323541	CACTATAAATCAA
chr13	110612830	110612831	chr13:110612831:C:T	rs330554	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr13	110876660	110876661	chr13:110876661:C:T	rs61282956	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr13	110920416	110920417	chr13:110920417:C:A	rs9515313	C	A	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr13	110948584	110948585	chr13:110948585:G:A	rs4773291	G	A	.	Hoxc9_MA0485.1	3	1	-	8.122318905428406	7.2340661324057836	TGACATCAATCAT
chr13	110984703	110984704	chr13:110984704:T:C	rs9522037	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr13	111006386	111006387	chr13:111006387:T:G	rs78804981	T	G	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr13	111009858	111009859	chr13:111009859:G:T	rs9555752	G	T	G	Hoxc9_MA0485.1	1	1	+	7.765074197823564	5.682313877247026	GGCAGTAAATTCC
chr13	111043804	111043805	chr13:111043805:C:A	rs76059592	C	A	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr13	111043835	111043836	chr13:111043836:T:C	rs753941391	T	C	T	Hoxc9_MA0485.1	12	1	+	8.333697236757425	8.587694190521978	GGCAGTGAATCAT
chr13	111311886	111311887	chr13:111311887:G:A	rs9555787	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr13	111636980	111636981	chr13:111636981:C:T	rs1891067	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr13	111930007	111930008	chr13:111930008:C:T	rs4907734	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr13	112029545	112029546	chr13:112029546:G:A	rs2031294	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr13	112078108	112078109	chr13:112078109:A:G	rs75815126	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr13	112113479	112113480	chr13:112113480:A:T	rs76650766	A	T	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	112248501	112248502	chr13:112248502:A:C	rs72667520	A	C	A	Hoxc9_MA0485.1	7	1	+	7.293261357723319	0.38903228851774074	GGCTACAAATCTC
chr13	112620036	112620037	chr13:112620037:C:A	rs942919	C	A	A	Hoxc9_MA0485.1	3	1	+	7.642880928235674	6.908129720665205	TTCCGTAAATCTG
chr13	112775691	112775692	chr13:112775692:C:T	rs189077714	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr13	112879336	112879337	chr13:112879337:C:A	rs1765871	C	A	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr13	112879338	112879339	chr13:112879339:G:T	rs1765762	G	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr13	113077884	113077885	chr13:113077885:G:T	rs60299054	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr13	113401589	113401590	chr13:113401590:G:A	rs7331116	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr13	113466646	113466647	chr13:113466647:A:G	rs7333340	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr13	113592463	113592464	chr13:113592464:C:T	rs7326929	C	T	C	Hoxc9_MA0485.1	11	1	+	8.183222303420395	9.378622773110454	GGCCATGAATCCT
chr13	113796827	113796828	chr13:113796828:A:T	rs554445776	A	T	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr13	113853532	113853533	chr13:113853533:C:T	rs59799531	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr13	113908554	113908555	chr13:113908555:C:T	rs7489888	C	T	t	Hoxc9_MA0485.1	6	1	-	9.099804593584006	12.134010360093425	AGCCATGAATCTC
chr13	113973565	113973566	chr13:113973566:G:A	rs147608102	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr13	113978727	113978728	chr13:113978728:A:G	rs11552972	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr13	114032461	114032462	chr13:114032462:A:G	rs7334530	A	G	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr14	20732785	20732786	chr14:20732786:G:A	rs58034818	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	20732788	20732789	chr14:20732789:A:G	rs7143445	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	21030894	21030895	chr14:21030895:G:A	rs1243459	G	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr14	21030912	21030913	chr14:21030913:T:C	rs2282035	T	C	T	Hoxc9_MA0485.1	4	1	-	7.550449798327539	6.382686084335954	TCCTATCAATCAG
chr14	21107568	21107569	chr14:21107569:A:G	rs750740873	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr14	21219854	21219855	chr14:21219855:C:T	rs11848128	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr14	21256084	21256085	chr14:21256085:A:G	rs78974307	A	G	A	Hoxc9_MA0485.1	7	1	+	9.041729501062449	2.1375004318568687	CCCTGTAAATCAC
chr14	21269646	21269647	chr14:21269647:T:C	rs769398114	T	C	T	Hoxc9_MA0485.1	8	1	-	7.988592863275701	1.086634353140744	GGCAATAAATGAC
chr14	21269664	21269665	chr14:21269665:C:T	chr14:21269665:C:T	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr14	21297965	21297966	chr14:21297966:C:G	rs61977469	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr14	21500733	21500734	chr14:21500734:G:A	rs3752411	G	A	G	Hoxc9_MA0485.1	3	1	-	9.632619726875006	8.744366953852383	GGCCATGAATCTC
chr14	21641402	21641403	chr14:21641403:T:C	rs4982480	T	C	T	Hoxc9_MA0485.1	5	1	+	8.91292322885832	4.4276118662198325	GGATATAAATTAC
chr14	21649181	21649182	chr14:21649182:A:G	rs8008166	A	G	G	Hoxc9_MA0485.1	6	1	+	8.449378057037094	5.415172290527674	AGGAATAAATCTT
chr14	21985621	21985622	chr14:21985622:A:G	rs80059204	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr14	22012478	22012479	chr14:22012479:T:A	rs2204961	T	A	A	Hoxc9_MA0485.1	11	1	+	7.012049026398077	7.8696384116071	GGCAGTGAATCTG
chr14	22333196	22333197	chr14:22333197:C:T	rs72690856	C	T	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	22333231	22333232	chr14:22333232:T:G	rs17198523	T	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr14	22334229	22334230	chr14:22334230:G:A	rs58693003	G	A	G	Hoxc9_MA0485.1	12	1	-	8.530355643537526	8.276358689772973	CGCAGTAAATTAC
chr14	22496688	22496689	chr14:22496689:G:A	rs72677508	G	A	G	Hoxc9_MA0485.1	12	1	-	7.367199258631501	7.113202304866951	GATCGTAAATCCC
chr14	22502280	22502281	chr14:22502281:C:G	rs17118924	C	G	C	Hoxc9_MA0485.1	2	1	+	8.850854323217437	6.15497018149613	GGCAGTAAATCCG
chr14	22506742	22506743	chr14:22506743:G:A	rs3794450	G	A	G	Hoxc9_MA0485.1	4	1	+	10.019893890260777	11.18765760425236	GTCCGTAAATCAT
chr14	22506769	22506770	chr14:22506770:T:C	rs3794451	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr14	22516379	22516380	chr14:22516380:C:T	rs3764160	C	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	22563861	22563862	chr14:22563862:A:G	rs7157534	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr14	22563895	22563896	chr14:22563896:G:T	rs1483976	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	22600790	22600791	chr14:22600791:G:A	rs2225215	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr14	22602918	22602919	chr14:22602919:T:C	rs34297727	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr14	22614438	22614439	chr14:22614439:A:T	rs149883788	A	T	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	22808683	22808684	chr14:22808684:G:T	rs56714188	G	T	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	22997064	22997065	chr14:22997065:G:A	rs116708093	G	A	g	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	23055256	23055257	chr14:23055257:T:C	rs117261340	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	23113359	23113360	chr14:23113360:C:T	rs12887958	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr14	23177443	23177444	chr14:23177444:C:T	rs28459366	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr14	23320523	23320524	chr14:23320524:G:A	rs745463925	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr14	23320566	23320567	chr14:23320567:C:T	rs45570737	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr14	23338955	23338956	chr14:23338956:A:G	rs57216591	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr14	23630087	23630088	chr14:23630088:T:A	rs77902733	T	A	T	Hoxc9_MA0485.1	5	1	+	8.779336346362992	1.8807933706433997	GGCTATAAATTCC
chr14	23630106	23630107	chr14:23630107:T:A	rs222727	T	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr14	23666842	23666843	chr14:23666843:A:T	rs221699	A	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr14	23982212	23982213	chr14:23982213:T:G	rs10140294	T	G	-	Hoxc9_MA0485.1	11	1	-	8.701139162346443	6.648149307447364	CTCAATAAATCAG
chr14	23982228	23982229	chr14:23982229:A:G	rs12587991	A	G	-	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr14	24114736	24114737	chr14:24114737:C:A	rs187479944	C	A	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	24436519	24436520	chr14:24436520:G:T	rs148035923	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr14	24960391	24960392	chr14:24960392:T:C	rs17185460	T	C	C	Hoxc9_MA0485.1	0	1	-	8.699159024858897	9.231974158149898	AGTCATAAATTTT
chr14	25042025	25042026	chr14:25042026:C:T	rs117543225	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr14	25150667	25150668	chr14:25150668:T:C	rs2026060	T	C	t	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	25911723	25911724	chr14:25911724:T:C	rs1954151	T	C	T	Hoxc9_MA0485.1	6	1	-	8.00861959384148	4.974413827332058	GTTTGTAAATCAC
chr14	26096737	26096738	chr14:26096738:T:A	rs10147978	T	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr14	26104826	26104827	chr14:26104827:A:G	rs61987569	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	26105352	26105353	chr14:26105353:T:A	rs2064484	T	A	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	26204958	26204959	chr14:26204959:G:A	rs115600133	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr14	26394270	26394271	chr14:26394271:T:C	rs77002324	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr14	26525375	26525376	chr14:26525376:T:C	rs17111330	T	C	C	Hoxc9_MA0485.1	4	1	-	7.988592863275701	6.820829149284118	GGCAATAAATGAC
chr14	27077819	27077820	chr14:27077820:A:G	rs61976165	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr14	27846212	27846213	chr14:27846213:G:A	rs2022831	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	27846232	27846233	chr14:27846233:A:C	rs2022832	A	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	28083660	28083661	chr14:28083661:A:G	rs151123676	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	28493770	28493771	chr14:28493771:C:T	rs75172287	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	28781577	28781578	chr14:28781578:T:G	rs58039779	T	G	T	Hoxc9_MA0485.1	5	1	+	7.705947118086946	0.8074041423673501	GCAAGTAAATCTC
chr14	29034754	29034755	chr14:29034755:G:C	rs1213180	G	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr14	29444521	29444522	chr14:29444522:T:C	rs73249798	T	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	29602114	29602115	chr14:29602115:C:T	rs875677	C	T	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr14	30464772	30464773	chr14:30464773:C:A	rs72664377	C	A	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr14	30657652	30657653	chr14:30657653:T:A	rs230342	T	A	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr14	30678119	30678120	chr14:30678120:G:C	rs188020350	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	30748435	30748436	chr14:30748436:A:G	rs11847318	A	G	g	Hoxc9_MA0485.1	0	1	+	8.12109836225636	8.65391349554736	ATCAATAAATCCC
chr14	31195060	31195061	chr14:31195061:G:A	rs11844935	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr14	31195441	31195442	chr14:31195442:C:T	rs74440743	C	T	C	Hoxc9_MA0485.1	2	1	+	8.324902794348475	6.9478843171872535	ACCCATAAATAAA
chr14	31419579	31419580	chr14:31419580:A:C	rs58506726	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr14	31428909	31428910	chr14:31428910:T:A	rs11624231	T	A	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	31712039	31712040	chr14:31712040:C:T	rs79387353	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	31712040	31712041	chr14:31712041:A:G	rs144417988	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	31853404	31853405	chr14:31853405:G:A	rs8016527	G	A	A	Hoxc9_MA0485.1	0	1	+	8.981644275584664	8.448829142293661	GATTATAAATCAG
chr14	31991192	31991193	chr14:31991193:G:A	rs8009524	G	A	A	Hoxc9_MA0485.1	4	1	+	8.355200781840185	9.522964495831769	TGCTGTAAATTAT
chr14	32018863	32018864	chr14:32018864:A:G	rs8019106	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr14	32027489	32027490	chr14:32027490:C:T	rs11156725	C	T	C	Hoxc9_MA0485.1	2	1	-	7.196869085734034	7.973350255051588	GGGTGTAAATCTG
chr14	32087511	32087512	chr14:32087512:G:A	rs190634142	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr14	32134810	32134811	chr14:32134811:A:G	rs17091619	A	G	A	Hoxc9_MA0485.1	5	1	-	10.832326201262074	6.347014838623589	GGCTATAAATTAC
chr14	32167881	32167882	chr14:32167882:G:C	rs8004917	G	C	C	Hoxc9_MA0485.1	0	1	+	7.1820872557084146	5.894378846523291	GCCCACAAATCAG
chr14	32226214	32226215	chr14:32226215:G:A	rs17098611	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr14	32308288	32308289	chr14:32308289:A:G	rs1002823	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	32454234	32454235	chr14:32454235:T:A	rs3784193	T	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	32497246	32497247	chr14:32497247:G:T	rs2224429	G	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr14	32567866	32567867	chr14:32567867:T:C	rs17099295	T	C	T	Hoxc9_MA0485.1	8	1	-	8.1003534171991	1.19839490706414	GCTAATCAATCAC
chr14	32785111	32785112	chr14:32785112:T:C	rs17099538	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr14	33279505	33279506	chr14:33279506:A:G	rs79774529	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr14	33356325	33356326	chr14:33356326:A:G	rs11156786	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr14	33475984	33475985	chr14:33475985:C:A	rs17101323	C	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr14	33480300	33480301	chr14:33480301:G:A	rs2383481	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr14	33678364	33678365	chr14:33678365:T:G	rs28612422	T	G	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr14	33693185	33693186	chr14:33693186:G:A	rs75073576	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	33730431	33730432	chr14:33730432:A:C	rs8018833	A	C	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	33768383	33768384	chr14:33768384:A:G	rs180693962	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	33773776	33773777	chr14:33773777:C:T	rs8017055	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	33806744	33806745	chr14:33806745:C:T	rs772526394	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr14	34165989	34165990	chr14:34165990:C:T	rs79114046	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr14	34183643	34183644	chr14:34183644:C:T	rs10145763	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr14	34324615	34324616	chr14:34324616:T:C	rs114859052	T	C	t	Hoxc9_MA0485.1	23	0	+	0	0	.
chr14	34369697	34369698	chr14:34369698:C:G	rs61171197	C	G	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr14	34380701	34380702	chr14:34380702:T:C	rs890830988	T	C	T	Hoxc9_MA0485.1	8	1	-	6.6201858093878725	-0.28177270074708766	GGCCATACATCAC
chr14	34380713	34380714	chr14:34380714:A:T	rs41491845	A	T	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr14	34380725	34380726	chr14:34380726:G:A	rs190456338	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	34693097	34693098	chr14:34693098:T:C	rs4982201	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	34710826	34710827	chr14:34710827:C:A	rs9491	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	34785266	34785267	chr14:34785267:A:C	rs4981250	A	C	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr14	35382423	35382424	chr14:35382424:A:G	rs55861660	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr14	35435431	35435432	chr14:35435432:G:C	rs78422340	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr14	35578790	35578791	chr14:35578791:T:C	rs4982292	T	C	T	Hoxc9_MA0485.1	12	1	-	7.662552246915616	7.788232603749086	AGCCACAAATCAA
chr14	36096175	36096176	chr14:36096176:G:C	rs73236778	G	C	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	36271240	36271241	chr14:36271241:A:T	rs77757454	A	T	A	Hoxc9_MA0485.1	9	1	-	8.781635278072102	4.953992709572078	TGTAATAAATCTG
chr14	36514417	36514418	chr14:36514418:A:G	rs1535341	A	G	G	Hoxc9_MA0485.1	10	1	-	8.491882927287962	10.295718831596714	TGCCATCAATTAC
chr14	36658799	36658800	chr14:36658800:G:A	rs116333270	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	36784516	36784517	chr14:36784517:A:C	rs848112	A	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr14	36988828	36988829	chr14:36988829:T:C	rs28487989	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr14	36989809	36989810	chr14:36989810:T:C	rs2022730	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr14	37588297	37588298	chr14:37588298:C:T	rs78512541	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr14	37588309	37588310	chr14:37588310:G:A	rs1884801	G	A	G	Hoxc9_MA0485.1	12	1	-	8.097229662760975	7.843232708996425	GCGAATAAATCTC
chr14	37777234	37777235	chr14:37777235:A:G	rs8016889	A	G	A	Hoxc9_MA0485.1	4	1	+	8.362500469417334	7.194736755425752	GCCAATGAATCAT
chr14	37791380	37791381	chr14:37791381:G:C	rs67863208	G	C	G	Hoxc9_MA0485.1	4	1	+	9.37613968437818	5.405976717120104	AACTGTAAATCAC
chr14	38188244	38188245	chr14:38188245:C:T	rs2803895	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	38200535	38200536	chr14:38200536:C:A	rs77266093	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr14	38311855	38311856	chr14:38311856:G:T	rs17107804	G	T	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	38554342	38554343	chr14:38554343:G:A	rs10146135	G	A	G	Hoxc9_MA0485.1	0	1	+	9.294998465410936	8.762183332119934	GGATGTAAATCAT
chr14	38873904	38873905	chr14:38873905:T:C	rs57949090	T	C	T	Hoxc9_MA0485.1	4	1	-	11.008903128222425	9.841139414230842	ACCCATAAATCAA
chr14	39229261	39229262	chr14:39229262:C:A	rs17109021	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr14	39260192	39260193	chr14:39260193:T:A	rs6571911	T	A	A	Hoxc9_MA0485.1	12	1	-	8.855963918751193	9.44570310073499	GATTATAAATCAA
chr14	39433132	39433133	chr14:39433133:T:G	rs11623676	T	G	g	Hoxc9_MA0485.1	24	0	-	0	0	.
chr14	39433159	39433160	chr14:39433160:C:T	rs74793264	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr14	39456967	39456968	chr14:39456968:A:G	rs28689476	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr14	39576845	39576846	chr14:39576846:G:A	rs141130532	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	39576856	39576857	chr14:39576857:A:C	rs75360298	A	C	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr14	40188049	40188050	chr14:40188050:T:C	rs10148725	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr14	40216657	40216658	chr14:40216658:G:A	rs12433686	G	A	g	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	40525235	40525236	chr14:40525236:C:T	rs1888590	C	T	T	Hoxc9_MA0485.1	10	1	+	7.136588594392911	5.332752690084159	GGCAGCAAATCAC
chr14	40576729	40576730	chr14:40576730:C:T	rs66723010	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr14	40841975	40841976	chr14:40841976:A:G	rs2814459	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr14	40841978	40841979	chr14:40841979:T:C	rs2600588	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr14	41603933	41603934	chr14:41603934:C:A	rs1118860	C	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr14	42123734	42123735	chr14:42123735:C:T	rs7147815	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr14	42163450	42163451	chr14:42163451:T:C	rs74045952	T	C	T	Hoxc9_MA0485.1	5	1	+	10.681586304523687	6.196274941885204	AGCTGTAAATCAT
chr14	42541611	42541612	chr14:42541612:A:G	rs17113149	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr14	42735471	42735472	chr14:42735472:G:A	rs1954355	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	43417708	43417709	chr14:43417709:G:A	rs77160730	G	A	g	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr14	44030083	44030084	chr14:44030084:C:T	rs76956490	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr14	44030106	44030107	chr14:44030107:G:C	rs78912026	G	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr14	44182424	44182425	chr14:44182425:C:A	rs2415842	C	A	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr14	44451747	44451748	chr14:44451748:A:G	rs9788494	A	G	a	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	44613034	44613035	chr14:44613035:T:A	rs7152269	T	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr14	44620401	44620402	chr14:44620402:T:G	rs1953851	T	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	44654174	44654175	chr14:44654175:T:C	rs17115379	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr14	44799690	44799691	chr14:44799691:A:G	rs57704473	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr14	44915042	44915043	chr14:44915043:T:G	rs73348966	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr14	44915044	44915045	chr14:44915045:C:T	rs780119420	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	45085240	45085241	chr14:45085241:A:G	rs146286612	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	45135648	45135649	chr14:45135649:T:C	rs149907045	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr14	45638836	45638837	chr14:45638837:C:T	rs61019014	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	45772585	45772586	chr14:45772586:T:C	rs11157457	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr14	45916830	45916831	chr14:45916831:C:T	rs11849656	C	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	45978727	45978728	chr14:45978728:A:G	rs2415934	A	G	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr14	46010323	46010324	chr14:46010324:T:C	rs1467548	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr14	46024173	46024174	chr14:46024174:C:T	rs11851440	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	46048196	46048197	chr14:46048197:G:C	rs10147651	G	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr14	46205247	46205248	chr14:46205248:T:C	rs858905	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr14	46405404	46405405	chr14:46405405:C:G	rs139274242	C	G	.	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	47467113	47467114	chr14:47467114:C:T	rs10220431	C	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr14	47467146	47467147	chr14:47467147:T:C	rs10220643	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr14	47917542	47917543	chr14:47917543:G:A	rs117992028	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr14	48205789	48205790	chr14:48205790:C:T	rs74864067	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr14	48335510	48335511	chr14:48335511:G:C	rs28814085	G	C	C	Hoxc9_MA0485.1	4	1	+	9.301447300939914	5.331284333681841	TGCTGTAAATCTT
chr14	49364183	49364184	chr14:49364184:T:C	rs2150487	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr14	49866840	49866841	chr14:49866841:T:A	rs61982333	T	A	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	49960108	49960109	chr14:49960109:C:T	rs77514627	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr14	50014115	50014116	chr14:50014116:C:T	rs2355658	C	T	T	Hoxc9_MA0485.1	4	1	-	10.019893890260777	11.18765760425236	GTCCGTAAATCAT
chr14	50082908	50082909	chr14:50082909:T:C	rs17122063	T	C	T	Hoxc9_MA0485.1	9	1	+	8.740511351616028	1.8522855372423968	TCCTATAAATCTA
chr14	50117424	50117425	chr14:50117425:T:G	rs140041932	T	G	T	Hoxc9_MA0485.1	6	1	-	8.408103990600145	6.23477269526916	CTCTATAAATCTC
chr14	50669003	50669004	chr14:50669004:C:T	rs183108911	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr14	50812788	50812789	chr14:50812789:A:G	rs570441035	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr14	50853093	50853094	chr14:50853094:C:G	rs7143937	C	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr14	50962619	50962620	chr14:50962620:A:G	rs7147998	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr14	50971258	50971259	chr14:50971259:A:C	rs9323203	A	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	51005226	51005227	chr14:51005227:A:G	rs148236873	A	G	A	Hoxc9_MA0485.1	12	1	-	9.955496261289479	10.209493215054032	CCCTATAAATCAT
chr14	51317454	51317455	chr14:51317455:T:C	rs10132908	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	51424512	51424513	chr14:51424513:C:A	chr14:51424513:C:A	C	A	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr14	51473149	51473150	chr14:51473150:G:A	rs75073548	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr14	51540588	51540589	chr14:51540589:C:T	rs77455747	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	51547517	51547518	chr14:51547518:G:A	rs12879891	G	A	A	Hoxc9_MA0485.1	12	1	-	7.6825533666576495	7.428556412893099	GGATATGAATCAC
chr14	51547527	51547528	chr14:51547528:T:C	rs116545653	T	C	T	Hoxc9_MA0485.1	2	1	-	7.6825533666576495	6.906072197340095	GGATATGAATCAC
chr14	51561511	51561512	chr14:51561512:G:A	rs17124197	G	A	G	Hoxc9_MA0485.1	1	1	+	7.9013774917788195	6.341933917868757	AGCTGTGAATCAC
chr14	51598887	51598888	chr14:51598888:T:C	rs75720812	T	C	T	Hoxc9_MA0485.1	6	1	-	9.056820170944613	6.022614404435191	GAAAATAAATCAT
chr14	51637850	51637851	chr14:51637851:T:G	rs1467522	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr14	51952798	51952799	chr14:51952799:T:C	rs1253633	T	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr14	51959013	51959014	chr14:51959014:T:C	rs28437731	T	C	T	Hoxc9_MA0485.1	8	1	-	9.18725301904569	2.2852945089107295	AGTCATCAATCAT
chr14	52111036	52111037	chr14:52111037:G:A	rs55708503	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr14	52128347	52128348	chr14:52128348:T:C	rs12588905	T	C	T	Hoxc9_MA0485.1	3	1	+	9.441815446020714	10.330068219043337	GTCTATAAATCTT
chr14	52131410	52131411	chr14:52131411:G:A	rs74786221	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr14	52160810	52160811	chr14:52160811:C:T	rs57382956	C	T	C	Hoxc9_MA0485.1	1	1	-	8.919372064387298	7.359928490477237	TGCTATAAATTTC
chr14	52266933	52266934	chr14:52266934:C:T	rs33998702	C	T	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr14	52266980	52266981	chr14:52266981:C:T	rs803011	C	T	t	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	52364132	52364133	chr14:52364133:C:T	rs544959333	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr14	52364140	52364141	chr14:52364141:T:C	rs74860213	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr14	52850621	52850622	chr14:52850622:C:T	rs2025633	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr14	53018069	53018070	chr14:53018070:A:T	rs11627885	A	T	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	53022561	53022562	chr14:53022562:G:C	rs4901335	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr14	53305572	53305573	chr14:53305573:G:A	rs146180642	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr14	53612044	53612045	chr14:53612045:T:C	rs34655316	T	C	T	Hoxc9_MA0485.1	7	1	-	7.650665623983683	0.7464365547781049	AGCTGTCAATCTT
chr14	53872774	53872775	chr14:53872775:T:C	rs7160860	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	53900569	53900570	chr14:53900570:T:C	rs1957847	T	C	C	Hoxc9_MA0485.1	6	1	-	9.744216691773817	6.710010925264396	GATCATAAATCAA
chr14	54359992	54359993	chr14:54359993:G:A	rs71412645	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	54399275	54399276	chr14:54399276:G:A	rs10147075	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr14	54444116	54444117	chr14:54444117:C:G	rs948071703	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	54444118	54444119	chr14:54444119:C:T	rs10142743	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr14	54475798	54475799	chr14:54475799:T:C	rs116684228	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr14	54609611	54609612	chr14:54609612:G:A	rs11158017	G	A	A	Hoxc9_MA0485.1	0	1	-	8.337796309023474	8.570139966542841	CGTCATAAATTAG
chr14	54629235	54629236	chr14:54629236:G:A	rs56294338	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr14	54638244	54638245	chr14:54638245:C:T	rs8022003	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr14	54658980	54658981	chr14:54658981:T:C	rs911620	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	54658997	54658998	chr14:54658998:T:C	rs911621	T	C	T	Hoxc9_MA0485.1	5	1	+	8.952886641208218	4.467575278569734	ACCTGTAAATCAA
chr14	54736703	54736704	chr14:54736704:C:T	rs8009669	C	T	T	Hoxc9_MA0485.1	4	1	-	9.55583506511045	10.723598779102034	GTCCGTAAATCAG
chr14	54877271	54877272	chr14:54877272:C:A	rs114524228	C	A	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr14	54877272	54877273	chr14:54877273:G:A	rs115410629	G	A	g	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr14	54903402	54903403	chr14:54903403:C:T	rs66989494	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr14	55031384	55031385	chr14:55031385:A:G	rs1187874	A	G	G	Hoxc9_MA0485.1	5	1	-	10.162063318264062	5.67675195562558	TGCCATAAATCCT
chr14	55304025	55304026	chr14:55304026:G:C	rs7148171	G	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr14	55383297	55383298	chr14:55383298:C:A	rs112246340	C	A	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	55412902	55412903	chr14:55412903:C:A	rs192182057	C	A	C	Hoxc9_MA0485.1	4	1	-	11.21440143781469	8.713549909489677	GGCTGTAAATCAT
chr14	55551926	55551927	chr14:55551927:A:G	rs8010372	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr14	55605924	55605925	chr14:55605925:C:A	rs77315200	C	A	c	Hoxc9_MA0485.1	10	1	+	10.655609599253083	7.971609265379134	TACCATAAATCAT
chr14	55758497	55758498	chr14:55758498:T:G	rs71412696	T	G	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr14	55846392	55846393	chr14:55846393:C:T	rs8014567	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr14	55928328	55928329	chr14:55928329:G:A	rs9323291	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr14	55969084	55969085	chr14:55969085:A:G	rs1188145	A	G	.	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	56103479	56103480	chr14:56103480:A:G	rs4628882	A	G	A	Hoxc9_MA0485.1	6	1	+	9.47003215397945	6.435826387470031	GCCCATAAATTTT
chr14	56217401	56217402	chr14:56217402:G:C	rs72717977	G	C	G	Hoxc9_MA0485.1	0	1	+	7.578657453936849	6.290949044751726	GACCATTAATCTC
chr14	56248005	56248006	chr14:56248006:G:C	rs189020737	G	C	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr14	56341166	56341167	chr14:56341167:A:G	rs59673991	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	56533517	56533518	chr14:56533518:A:T	rs10149397	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	56660270	56660271	chr14:56660271:G:T	rs8007927	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr14	56660311	56660312	chr14:56660312:A:C	rs12050111	A	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	56707949	56707950	chr14:56707950:C:T	rs198257	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr14	56733675	56733676	chr14:56733676:A:T	rs7151335	A	T	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr14	57032263	57032264	chr14:57032264:G:A	rs1780859	G	A	G	Hoxc9_MA0485.1	1	1	+	8.508255009192705	6.948811435282644	AGCTGTCAATCAT
chr14	57498114	57498115	chr14:57498115:C:G	rs61995062	C	G	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr14	58239357	58239358	chr14:58239358:G:A	chr14:58239358:G:A	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr14	58270683	58270684	chr14:58270684:C:T	rs1885133	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr14	58625356	58625357	chr14:58625357:T:C	rs191103	T	C	T	Hoxc9_MA0485.1	5	1	+	7.609163957678981	3.1238525950404945	CTTCGTAAATCAC
chr14	58660242	58660243	chr14:58660243:C:T	rs863098	C	T	C	Hoxc9_MA0485.1	1	1	+	8.813201290365203	7.869401451120338	GCCTATAAATAAC
chr14	58717877	58717878	chr14:58717878:T:G	rs710008	T	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	58763222	58763223	chr14:58763223:G:A	rs1432097	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr14	58789007	58789008	chr14:58789008:T:C	rs8018026	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	59267024	59267025	chr14:59267025:G:C	rs12878284	G	C	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr14	59278371	59278372	chr14:59278372:C:T	rs78622893	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	59310802	59310803	chr14:59310803:C:T	rs17833966	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr14	59310880	59310881	chr14:59310881:A:C	rs7149497	A	C	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	59321502	59321503	chr14:59321503:A:C	rs8015689	A	C	A	Hoxc9_MA0485.1	9	1	-	7.836054932109804	0.947829117736172	GGAAATGAATCAC
chr14	59434076	59434077	chr14:59434077:G:A	rs78751137	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	59476749	59476750	chr14:59476750:G:T	rs1253097	G	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr14	59483294	59483295	chr14:59483295:C:A	rs10147234	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr14	59485007	59485008	chr14:59485008:A:G	rs369613111	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr14	60098089	60098090	chr14:60098090:T:C	rs219306	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr14	60721484	60721485	chr14:60721485:G:T	rs117055123	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr14	60734470	60734471	chr14:60734471:C:G	rs549422255	C	G	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr14	61130827	61130828	chr14:61130828:C:T	rs955597841	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr14	61130845	61130846	chr14:61130846:C:T	rs559180719	C	T	C	Hoxc9_MA0485.1	4	1	-	9.924267935774889	11.092031649766472	TGTCGTAAATCAC
chr14	61149890	61149891	chr14:61149891:C:G	rs10151951	C	G	G	Hoxc9_MA0485.1	1	1	-	7.985319231886769	6.846358750555095	AGGAATAAATCTG
chr14	61154390	61154391	chr14:61154391:G:A	rs7158993	G	A	G	Hoxc9_MA0485.1	4	1	+	9.487078756969774	10.654842470961357	ATCCGTAAATCAT
chr14	61161599	61161600	chr14:61161600:C:G	rs8020314	C	G	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	61178864	61178865	chr14:61178865:C:T	rs191144649	C	T	C	Hoxc9_MA0485.1	0	1	-	10.49020911208403	9.957393978793029	GGCCATGAATCAC
chr14	61178870	61178871	chr14:61178871:A:G	rs140815885	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	61237750	61237751	chr14:61237751:C:T	rs12437406	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	61323267	61323268	chr14:61323268:G:T	rs7148876	G	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	61487553	61487554	chr14:61487554:C:T	rs12886896	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	61547543	61547544	chr14:61547544:C:A	rs59977792	C	A	C	Hoxc9_MA0485.1	3	1	+	10.094873754655017	9.360122547084547	AGCCATAAATCCA
chr14	61547544	61547545	chr14:61547545:A:T	rs58800443	A	T	A	Hoxc9_MA0485.1	4	1	+	10.094873754655017	6.426258512338423	AGCCATAAATCCA
chr14	61547570	61547571	chr14:61547571:T:A	rs2184633	T	A	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	61590008	61590009	chr14:61590009:C:T	rs12897240	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr14	61899816	61899817	chr14:61899817:A:G	rs11158366	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	62213206	62213207	chr14:62213207:G:A	rs72476707	G	A	G	Hoxc9_MA0485.1	1	1	+	7.571485271973132	6.012041698063071	CGTCATGAATCAT
chr14	62213222	62213223	chr14:62213223:G:A	rs72476708	G	A	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	62739848	62739849	chr14:62739849:G:A	rs10141683	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr14	62796784	62796785	chr14:62796785:A:G	rs35679534	A	G	A	Hoxc9_MA0485.1	4	1	+	8.055129341819361	6.887365627827777	AGACATCAATCAA
chr14	62885967	62885968	chr14:62885968:C:T	rs4270090	C	T	C	Hoxc9_MA0485.1	0	1	-	8.840575432723302	8.3077602994323	GGCTATAAATATT
chr14	63283970	63283971	chr14:63283971:G:A	rs952505496	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr14	63346020	63346021	chr14:63346021:A:G	rs11847076	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr14	63420101	63420102	chr14:63420102:A:G	rs17101157	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	63438284	63438285	chr14:63438285:C:G	rs150536324	C	G	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	63457683	63457684	chr14:63457684:C:T	rs766079	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr14	63473258	63473259	chr14:63473259:G:A	rs7140763	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	63622150	63622151	chr14:63622151:C:T	rs28796021	C	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	63784638	63784639	chr14:63784639:A:C	rs4591051	A	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	63958561	63958562	chr14:63958562:A:G	rs2994422	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr14	64196364	64196365	chr14:64196365:T:C	rs2781379	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr14	64224065	64224066	chr14:64224066:T:C	rs1152586	T	C	C	Hoxc9_MA0485.1	0	1	-	8.211398164012277	8.74421329730328	AGCCTTAAATCTT
chr14	64501687	64501688	chr14:64501688:A:C	rs560015455	A	C	A	Hoxc9_MA0485.1	7	1	+	9.731300217287552	2.8270711480819735	GCAAATAAATCAC
chr14	64507569	64507570	chr14:64507570:G:A	rs12882168	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr14	64577606	64577607	chr14:64577607:C:T	rs56403644	C	T	C	Hoxc9_MA0485.1	1	1	+	9.483752099051978	8.539952259807114	TCCAATAAATCTT
chr14	64581122	64581123	chr14:64581123:A:T	rs74673631	A	T	a	Hoxc9_MA0485.1	0	1	+	8.714828645378669	8.192279027003917	AGTTGTAAATCAA
chr14	64855018	64855019	chr14:64855019:G:A	rs17767870	G	A	g	Hoxc9_MA0485.1	3	1	-	8.653714372879012	7.76546159985639	TGCCGTAAATTAA
chr14	64940281	64940282	chr14:64940282:C:T	rs2071566	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr14	64940441	64940442	chr14:64940442:A:G	rs4902346	A	G	A	Hoxc9_MA0485.1	9	1	-	8.882593403389158	1.9943675890155275	AGCTGTAAATCCC
chr14	64941790	64941791	chr14:64941791:G:A	rs2737844	G	A	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr14	65214622	65214623	chr14:65214623:G:C	rs55931761	G	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr14	65227454	65227455	chr14:65227455:C:A	rs184503772	C	A	C	Hoxc9_MA0485.1	10	1	+	6.534704335622896	3.8507040017489462	GGCAGTGAATCCC
chr14	65227464	65227465	chr14:65227465:C:T	rs142959578	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	65261692	65261693	chr14:65261693:T:G	rs60763125	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	65302775	65302776	chr14:65302776:A:G	rs116640319	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	65302778	65302779	chr14:65302779:A:G	rs1281834205	A	G	a	Hoxc9_MA0485.1	24	0	-	0	0	.
chr14	65638045	65638046	chr14:65638046:A:G	rs61988016	A	G	A	Hoxc9_MA0485.1	5	1	-	10.890562783608878	6.4052514209703935	TGCAATAAATCAA
chr14	65993041	65993042	chr14:65993042:G:A	rs1147448	G	A	A	Hoxc9_MA0485.1	4	1	+	8.520751020171662	9.688514734163247	CACAGTAAATCAT
chr14	66015357	66015358	chr14:66015358:G:A	rs876747	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr14	66331056	66331057	chr14:66331057:T:C	rs533616868	T	C	T	Hoxc9_MA0485.1	8	1	-	6.824878955736847	-0.07707955439811248	GGCCTTCAATCTC
chr14	66449634	66449635	chr14:66449635:C:T	rs17827523	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	66880997	66880998	chr14:66880998:T:A	rs17836604	T	A	T	Hoxc9_MA0485.1	7	1	-	10.578329247497521	5.38247803858095	GGCTATAAATTAT
chr14	67111261	67111262	chr14:67111262:A:G	rs72715376	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	67232198	67232199	chr14:67232199:A:G	rs10152002	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr14	67344104	67344105	chr14:67344105:T:A	rs10144774	T	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr14	67411666	67411667	chr14:67411667:A:G	rs1555853	A	G	A	Hoxc9_MA0485.1	11	1	+	8.287544010109269	3.8750106112408984	GGTTGTAAATTAC
chr14	67520825	67520826	chr14:67520826:T:C	rs11158678	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	67565646	67565647	chr14:67565647:C:G	rs72721039	C	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr14	67596859	67596860	chr14:67596860:A:C	rs11627686	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	67776870	67776871	chr14:67776871:G:A	rs12892221	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr14	67817616	67817617	chr14:67817617:G:A	chr14:67817617:G:A	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr14	67859267	67859268	chr14:67859268:T:C	rs7157288	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	67958091	67958092	chr14:67958092:C:T	rs4902538	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr14	68012733	68012734	chr14:68012734:T:G	rs10143455	T	G	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	68267967	68267968	chr14:68267968:A:G	rs56048833	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	68390538	68390539	chr14:68390539:C:G	rs12889666	C	G	C	Hoxc9_MA0485.1	1	1	-	7.935600210614644	6.7966397292829726	GGCTATAAATTCA
chr14	68460824	68460825	chr14:68460825:G:A	rs1989974	G	A	G	Hoxc9_MA0485.1	2	1	-	7.021899771183617	5.644881294022393	CCCAGTCAATCAC
chr14	68538896	68538897	chr14:68538897:G:A	rs34636650	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr14	68593865	68593866	chr14:68593866:C:T	rs59934413	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr14	68600307	68600308	chr14:68600308:C:T	rs151045330	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr14	68682838	68682839	chr14:68682839:T:G	rs72729583	T	G	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	68733124	68733125	chr14:68733125:G:A	rs4902640	G	A	G	Hoxc9_MA0485.1	0	1	+	7.937894671206543	7.40507953791554	GGTAGTAAATCCT
chr14	68749298	68749299	chr14:68749299:G:T	rs194754	G	T	T	Hoxc9_MA0485.1	0	1	+	10.343560497123473	9.28819574545772	GGTCATAAATTAC
chr14	68842410	68842411	chr14:68842411:C:T	rs72731585	C	T	c	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	69024482	69024483	chr14:69024483:C:T	rs61981619	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	69089148	69089149	chr14:69089149:G:C	rs12435594	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr14	69096353	69096354	chr14:69096354:A:G	rs77112709	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr14	69460241	69460242	chr14:69460242:G:A	rs11537776	G	A	G	Hoxc9_MA0485.1	10	1	-	10.616263744854674	8.812427840545922	GGAAATAAATCAT
chr14	69467893	69467894	chr14:69467894:A:G	rs77775838	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr14	69518780	69518781	chr14:69518781:G:A	rs4899298	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	69559440	69559441	chr14:69559441:G:A	rs78708259	G	A	G	Hoxc9_MA0485.1	0	1	+	8.922386354068513	8.38957122077751	GTTTATAAATCAT
chr14	69617714	69617715	chr14:69617715:C:G	rs117208445	C	G	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	69657989	69657990	chr14:69657990:C:T	rs567329204	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr14	69740122	69740123	chr14:69740123:C:T	rs10151549	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr14	69740123	69740124	chr14:69740124:G:A	rs61982072	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	69849812	69849813	chr14:69849813:C:A	rs74886828	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	69849817	69849818	chr14:69849818:A:G	rs61983475	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr14	69926327	69926328	chr14:69926328:T:C	rs1276114	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr14	69928312	69928313	chr14:69928313:C:A	rs760509167	C	A	c	Hoxc9_MA0485.1	1	1	-	8.864496510519226	6.781736189942687	CGAAATAAATCAG
chr14	69937618	69937619	chr14:69937619:T:C	rs170568	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr14	69937624	69937625	chr14:69937625:C:T	rs10142550	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	69992037	69992038	chr14:69992038:G:C	rs227420	G	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	69992053	69992054	chr14:69992054:A:G	rs8022808	A	G	A	Hoxc9_MA0485.1	4	1	+	7.955956927733914	6.788193213742329	GGCCATAACTCAG
chr14	70018373	70018374	chr14:70018374:G:A	rs1020811	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr14	70141497	70141498	chr14:70141498:C:T	rs8005050	C	T	C	Hoxc9_MA0485.1	1	1	-	8.691406033966466	7.131962460056403	GGATGTAAATCTC
chr14	70255666	70255667	chr14:70255667:G:A	rs117981850	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	70713981	70713982	chr14:70713982:C:T	rs77347315	C	T	C	Hoxc9_MA0485.1	3	1	+	8.071840464249016	7.183587691226393	TGGCATAAATCTA
chr14	70820033	70820034	chr14:70820034:T:G	rs4902860	T	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr14	70897337	70897338	chr14:70897338:A:T	rs79932897	A	T	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	71128263	71128264	chr14:71128264:T:C	rs221911	T	C	t	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	71128277	71128278	chr14:71128278:A:G	rs221910	A	G	A	Hoxc9_MA0485.1	9	1	-	9.330352081407092	2.4421262670334594	ATCAATAAATCAA
chr14	71150615	71150616	chr14:71150616:T:A	rs4902893	T	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	71372806	71372807	chr14:71372807:A:G	rs35468256	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	71686975	71686976	chr14:71686976:A:G	rs10873246	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	71958804	71958805	chr14:71958805:T:C	rs2238280	T	C	T	Hoxc9_MA0485.1	1	1	+	7.995233552502679	8.939033391747545	ATCTGTAAATCTC
chr14	71970431	71970432	chr14:71970432:T:A	rs4899408	T	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	72318971	72318972	chr14:72318972:A:G	rs2239250	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	72595046	72595047	chr14:72595047:A:G	rs17118212	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr14	72595719	72595720	chr14:72595720:C:T	rs7492545	C	T	C	Hoxc9_MA0485.1	0	1	-	8.703511543205366	8.170696409914363	GGCCATCAATTAA
chr14	72597497	72597498	chr14:72597498:G:A	rs17180817	G	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	72597522	72597523	chr14:72597523:A:G	rs17180824	A	G	G	Hoxc9_MA0485.1	6	1	+	9.960610433925117	6.926404667415698	AGACATAAATCTT
chr14	72876209	72876210	chr14:72876210:G:A	rs17781679	G	A	G	Hoxc9_MA0485.1	11	1	-	8.51128164130783	9.706682110997889	AGCCATCAATCCT
chr14	74238648	74238649	chr14:74238649:C:T	rs1860714	C	T	C	Hoxc9_MA0485.1	1	1	-	9.616135768931398	8.056692195021336	CGCAGTAAATCAG
chr14	74455191	74455192	chr14:74455192:A:C	rs740503	A	C	A	Hoxc9_MA0485.1	3	1	+	8.95730656174445	9.692057769314918	TGAAATAAATCTC
chr14	74571985	74571986	chr14:74571986:T:C	rs10140101	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr14	74804255	74804256	chr14:74804256:C:T	rs533640459	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	75148091	75148092	chr14:75148092:A:C	chr14:75148092:A:C	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr14	75733067	75733068	chr14:75733068:G:A	rs117341850	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr14	75751446	75751447	chr14:75751447:C:T	rs142806754	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr14	75831284	75831285	chr14:75831285:C:G	rs117853679	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr14	76490788	76490789	chr14:76490789:T:G	rs2361291	T	G	G	Hoxc9_MA0485.1	6	1	-	7.8164233214397685	5.643092026108784	GGCCATAACTCTC
chr14	76542041	76542042	chr14:76542042:T:C	rs2543561	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	76542069	76542070	chr14:76542070:G:A	rs72733609	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr14	76542071	76542072	chr14:76542072:G:A	rs79758714	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr14	76706264	76706265	chr14:76706265:T:C	rs2362160	T	C	T	Hoxc9_MA0485.1	4	1	-	10.622712580383652	9.454948866392069	TGCAATAAATCTT
chr14	76724807	76724808	chr14:76724808:A:G	rs1861424	A	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	76726785	76726786	chr14:76726786:C:G	rs76223657	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	76775635	76775636	chr14:76775636:C:T	rs1882839	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	77033259	77033260	chr14:77033260:T:C	rs116965519	T	C	T	Hoxc9_MA0485.1	7	1	-	7.3503706511861875	0.44614158198060905	GGGAGTAAATCTG
chr14	77041536	77041537	chr14:77041537:A:C	rs377110181	A	C	A	Hoxc9_MA0485.1	5	1	-	8.787500378042688	1.8889574023230908	GTAAATAAATCAC
chr14	77070918	77070919	chr14:77070919:T:C	rs204980	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr14	77210497	77210498	chr14:77210498:T:A	rs12881255	T	A	T	Hoxc9_MA0485.1	4	1	-	12.412828539619873	8.74421329730328	GGCCATAAATCTT
chr14	77526716	77526717	chr14:77526717:T:C	rs7145386	T	C	T	Hoxc9_MA0485.1	0	1	+	9.063269006473591	8.830925348954224	TACAATAAATCTT
chr14	77752941	77752942	chr14:77752942:T:G	rs7148078	T	G	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr14	78085044	78085045	chr14:78085045:C:T	rs12434803	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	78099701	78099702	chr14:78099702:T:A	rs99298	T	A	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	78512138	78512139	chr14:78512139:T:C	rs10782463	T	C	C	Hoxc9_MA0485.1	8	1	-	8.183222303420395	1.2812637932854372	GGCCATGAATCCT
chr14	78925719	78925720	chr14:78925720:G:A	rs220103	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr14	78934067	78934068	chr14:78934068:T:C	rs718787	T	C	T	Hoxc9_MA0485.1	3	1	-	9.97749848476682	5.1958532203516	AGCAGTAAATCTT
chr14	78959838	78959839	chr14:78959839:T:C	rs139086515	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	78959879	78959880	chr14:78959880:A:G	rs17108418	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	79418436	79418437	chr14:79418437:C:G	rs2574751	C	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr14	79437032	79437033	chr14:79437033:G:A	rs2370983	G	A	A	Hoxc9_MA0485.1	6	1	+	7.119740382322369	10.15394614883179	CTCCATGAATCAC
chr14	79544869	79544870	chr14:79544870:G:A	rs79328665	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr14	79544878	79544879	chr14:79544879:G:A	rs4903864	G	A	G	Hoxc9_MA0485.1	12	1	-	8.06568367704063	7.811686723276078	TGCATTAAATCAC
chr14	79596696	79596697	chr14:79596697:T:C	rs59673640	T	C	t	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	79639853	79639854	chr14:79639854:G:C	rs6574516	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	79639876	79639877	chr14:79639877:C:T	rs8021855	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	79736698	79736699	chr14:79736699:G:T	rs2024335	G	T	T	Hoxc9_MA0485.1	3	1	-	9.168638930096824	8.433887722526356	ACCCATAAATAAC
chr14	79919834	79919835	chr14:79919835:A:G	rs75195817	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr14	79919850	79919851	chr14:79919851:A:C	chr14:79919851:A:C	A	C	A	Hoxc9_MA0485.1	11	1	+	7.58423371256369	5.5312438576646095	ACTCATCAATCAG
chr14	79919850	79919851	chr14:79919851:A:T	rs8023088	A	T	A	Hoxc9_MA0485.1	11	1	+	7.58423371256369	6.726644327354667	ACTCATCAATCAG
chr14	80199046	80199047	chr14:80199047:C:A	rs73333393	C	A	C	Hoxc9_MA0485.1	1	1	+	8.556017379666937	8.13553428708855	TCCTGTAAATCAG
chr14	80357077	80357078	chr14:80357078:A:G	rs12323686	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	81085859	81085860	chr14:81085860:G:C	rs2284733	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr14	81269681	81269682	chr14:81269682:T:C	rs756289658	T	C	T	Hoxc9_MA0485.1	5	1	+	10.697404963821917	6.212093601183432	AACAATAAATCAC
chr14	81536779	81536780	chr14:81536780:A:G	rs1951609	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr14	81716085	81716086	chr14:81716086:A:G	rs1958218	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr14	82313762	82313763	chr14:82313763:T:C	rs1457992	T	C	t	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	82725475	82725476	chr14:82725476:C:A	rs73343648	C	A	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr14	82740674	82740675	chr14:82740675:G:A	rs1242545	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	83280203	83280204	chr14:83280204:G:A	rs79258673	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	83511583	83511584	chr14:83511584:A:G	chr14:83511584:A:G	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr14	83780447	83780448	chr14:83780448:T:C	rs1958444	T	C	C	Hoxc9_MA0485.1	9	1	+	8.381748814669127	1.493523000295495	AGCCATGAATCTG
chr14	83812403	83812404	chr14:83812404:A:C	rs8020604	A	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr14	83817060	83817061	chr14:83817061:C:T	rs1754370	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	83871517	83871518	chr14:83871518:T:C	rs17119169	T	C	C	Hoxc9_MA0485.1	7	1	-	8.784417823871365	1.8801887546657874	TGGAATAAATCAT
chr14	83873783	83873784	chr14:83873784:G:T	rs17119189	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr14	84095648	84095649	chr14:84095649:T:C	rs4551972	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	84490248	84490249	chr14:84490249:C:G	rs79664069	C	G	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr14	84546373	84546374	chr14:84546374:G:A	rs895889	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr14	85150598	85150599	chr14:85150599:T:C	rs74357947	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	85174823	85174824	chr14:85174824:T:C	rs1449417	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	85234505	85234506	chr14:85234506:A:G	rs61981021	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr14	85408640	85408641	chr14:85408641:C:G	rs8012487	C	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr14	86243202	86243203	chr14:86243203:A:T	rs2149763	A	T	T	Hoxc9_MA0485.1	3	1	+	8.507872078277094	8.35437051282494	AGCAATCAATCTG
chr14	86405637	86405638	chr14:86405638:A:G	rs7153727	A	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	86405639	86405640	chr14:86405640:A:G	rs35504663	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr14	86463581	86463582	chr14:86463582:T:C	rs2022771	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr14	86693985	86693986	chr14:86693986:G:T	rs67484906	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr14	86756960	86756961	chr14:86756961:C:T	rs17797290	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	87015080	87015081	chr14:87015081:T:A	rs1769458	T	A	T	Hoxc9_MA0485.1	9	1	+	7.648464208488747	3.820821639988721	GCCCATAAATACC
chr14	87113512	87113513	chr14:87113513:C:G	rs56250143	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr14	87113519	87113520	chr14:87113520:T:C	rs12879011	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr14	87436015	87436016	chr14:87436016:A:G	rs7146282	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr14	87786063	87786064	chr14:87786064:A:T	rs7153082	A	T	A	Hoxc9_MA0485.1	5	1	-	10.330068219043337	3.431525243323743	GTCCATAAATCTT
chr14	87869545	87869546	chr14:87869546:T:C	rs1450697	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr14	88080125	88080126	chr14:88080126:T:C	rs17203608	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr14	88327769	88327770	chr14:88327770:G:A	rs11627878	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	88385082	88385083	chr14:88385083:A:G	rs74071512	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr14	88995788	88995789	chr14:88995789:G:C	rs8018805	G	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr14	89226999	89227000	chr14:89227000:C:T	rs10134653	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr14	89279815	89279816	chr14:89279816:T:C	rs183028462	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	89305459	89305460	chr14:89305460:C:G	rs1342771749	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	89319271	89319272	chr14:89319272:T:C	rs4899979	T	C	t	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	89399689	89399690	chr14:89399690:C:A	rs117366705	C	A	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr14	89886766	89886767	chr14:89886767:G:C	rs74852683	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr14	89889922	89889923	chr14:89889923:C:T	rs75594167	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr14	89900911	89900912	chr14:89900912:A:G	rs11852044	A	G	A	Hoxc9_MA0485.1	6	1	+	9.064818395412177	6.030612628902753	TCTTATAAATCAC
chr14	89912893	89912894	chr14:89912894:T:C	rs10139734	T	C	T	Hoxc9_MA0485.1	5	1	+	9.70966564924594	5.224354286607455	GTCTATAAATCAA
chr14	89912915	89912916	chr14:89912916:C:T	rs7158812	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr14	89912917	89912918	chr14:89912918:C:A	rs11851678	C	A	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	90140769	90140770	chr14:90140770:A:T	rs78143019	A	T	A	Hoxc9_MA0485.1	0	1	+	9.619389786413345	9.096840168038593	AGAAATAAATCAG
chr14	90341490	90341491	chr14:90341491:G:A	rs4900036	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	90382730	90382731	chr14:90382731:C:A	rs559146038	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr14	90382759	90382760	chr14:90382760:G:A	rs12147703	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr14	91109475	91109476	chr14:91109476:C:G	rs117763662	C	G	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	91250383	91250384	chr14:91250384:C:G	rs73334692	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr14	91476840	91476841	chr14:91476841:C:T	rs147432318	C	T	C	Hoxc9_MA0485.1	4	1	-	8.276448055348489	9.444211769340072	GCCTGTAAATCCC
chr14	91883856	91883857	chr14:91883857:C:T	rs576079339	C	T	C	Hoxc9_MA0485.1	1	1	-	9.558564781127018	7.999121207216954	AGTTGTAAATCAC
chr14	92045798	92045799	chr14:92045799:A:G	rs11160037	A	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	92120195	92120196	chr14:92120196:A:G	rs1950810	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr14	92465294	92465295	chr14:92465295:C:T	rs73339573	C	T	C	Hoxc9_MA0485.1	0	1	-	9.13810102784691	8.605285894555909	GGCCATTAATCTC
chr14	92472678	92472679	chr14:92472679:C:G	rs7400774	C	G	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	92849136	92849137	chr14:92849137:G:A	rs758915788	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	92891436	92891437	chr14:92891437:C:T	rs56301114	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr14	92891455	92891456	chr14:92891456:T:C	rs59660924	T	C	C	Hoxc9_MA0485.1	9	1	+	7.520850042143314	0.6326242277696815	GGTAATGAATCTC
chr14	92891459	92891460	chr14:92891460:C:G	rs57149080	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr14	92991405	92991406	chr14:92991406:T:C	rs3783913	T	C	C	Hoxc9_MA0485.1	6	1	-	7.611757731872597	4.5775519653631775	GGCCATAAATGTT
chr14	93146513	93146514	chr14:93146514:A:G	rs34354491	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr14	93800144	93800145	chr14:93800145:T:C	rs17129181	T	C	T	Hoxc9_MA0485.1	7	1	-	10.714100392477508	3.8098713232719303	AACCATAAATCAG
chr14	93889100	93889101	chr14:93889101:C:T	rs1570136	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	93889114	93889115	chr14:93889115:C:T	rs736396	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr14	93901949	93901950	chr14:93901950:T:C	rs8011835	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr14	94047260	94047261	chr14:94047261:G:A	rs74404892	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	94303657	94303658	chr14:94303658:T:C	rs11621117	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr14	94375303	94375304	chr14:94375304:G:A	rs1243167	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr14	94386458	94386459	chr14:94386459:T:C	rs75285293	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr14	94462681	94462682	chr14:94462682:G:A	rs17090908	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr14	94628664	94628665	chr14:94628665:A:G	rs12885542	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	94686775	94686776	chr14:94686776:T:C	rs742893	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr14	94844827	94844828	chr14:94844828:G:C	rs1243498	G	C	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	95034495	95034496	chr14:95034496:A:G	rs113786080	A	G	A	Hoxc9_MA0485.1	1	1	+	9.337081915316285	10.896525489226345	AATCATAAATCAG
chr14	95228005	95228006	chr14:95228006:C:G	rs4905287	C	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr14	95243156	95243157	chr14:95243157:T:C	rs28648424	T	C	C	Hoxc9_MA0485.1	7	1	-	7.476107851548403	0.5718787823428246	GGCAGTGAATCTT
chr14	95296835	95296836	chr14:95296836:A:G	rs34703907	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr14	95381956	95381957	chr14:95381957:C:T	rs12432260	C	T	C	Hoxc9_MA0485.1	4	1	-	9.161411582915608	10.329175296907191	GGCTGTAAATCCT
chr14	95384285	95384286	chr14:95384286:C:T	rs1187723	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	95433905	95433906	chr14:95433906:A:G	rs7152933	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr14	95461189	95461190	chr14:95461190:G:A	rs115996104	G	A	G	Hoxc9_MA0485.1	11	1	-	7.52466996976718	8.720070439457237	AGGCATAAATCCG
chr14	95461216	95461217	chr14:95461217:C:T	rs1258471598	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	95461217	95461218	chr14:95461218:G:A	rs34405923	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	95539678	95539679	chr14:95539679:G:A	rs10131473	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr14	95616765	95616766	chr14:95616766:A:G	rs35427639	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	95617004	95617005	chr14:95617005:G:A	rs4905351	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	95670437	95670438	chr14:95670438:C:A	rs2296310	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr14	95670456	95670457	chr14:95670457:A:G	rs2249778	A	G	A	Hoxc9_MA0485.1	5	1	-	7.973350255051588	3.4880388924131016	GGATGTAAATCTG
chr14	95770606	95770607	chr14:95770607:A:C	rs149252331	A	C	A	Hoxc9_MA0485.1	7	1	+	8.453227739500143	1.548998670294564	GAAAATAAATCTC
chr14	95834345	95834346	chr14:95834346:C:T	rs17191170	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	95834699	95834700	chr14:95834700:T:C	rs10146317	T	C	C	Hoxc9_MA0485.1	2	1	-	10.21460738768967	9.438126218372116	AGACATAAATCTC
chr14	95915533	95915534	chr14:95915534:G:A	rs79896853	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr14	96050114	96050115	chr14:96050115:G:T	rs34400506	G	T	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	96098582	96098583	chr14:96098583:C:T	rs4900306	C	T	C	Hoxc9_MA0485.1	10	1	+	9.479856180119201	7.6760202758104485	AGAAATAAATCTC
chr14	96135246	96135247	chr14:96135247:T:C	rs4243714	T	C	C	Hoxc9_MA0485.1	0	1	-	7.6058590195183795	8.138674152809381	ACCCATTAATCAG
chr14	96146271	96146272	chr14:96146272:G:A	rs72704813	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	96175917	96175918	chr14:96175918:T:C	rs7158485	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr14	96310259	96310260	chr14:96310260:G:A	rs3809424	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr14	96539130	96539131	chr14:96539131:G:A	rs77599703	G	A	G	Hoxc9_MA0485.1	1	1	+	10.835087869975842	9.275644296065781	AGCAGTAAATCAT
chr14	96705536	96705537	chr14:96705537:C:T	rs17310169	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr14	96953622	96953623	chr14:96953623:C:G	rs863084	C	G	C	Hoxc9_MA0485.1	6	1	+	9.477371894360326	8.616497423181887	GCCAATCAATCAC
chr14	97634378	97634379	chr14:97634379:C:T	rs185337807	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr14	97769469	97769470	chr14:97769470:A:T	rs74440278	A	T	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr14	97769510	97769511	chr14:97769511:G:A	rs12436797	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr14	97776648	97776649	chr14:97776649:C:A	rs716309	C	A	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr14	98087918	98087919	chr14:98087919:C:T	rs10150247	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr14	98212940	98212941	chr14:98212941:T:C	rs112893044	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	98231370	98231371	chr14:98231371:G:A	rs74421347	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr14	99120414	99120415	chr14:99120415:A:G	rs140837773	A	G	A	Hoxc9_MA0485.1	4	1	+	9.996678408971151	8.828914694979568	GGCCATAAATAAA
chr14	99266542	99266543	chr14:99266543:G:A	rs78706825	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr14	99361935	99361936	chr14:99361936:C:T	rs191290941	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr14	99431341	99431342	chr14:99431342:C:T	rs916772759	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr14	99563680	99563681	chr14:99563681:G:A	rs72706331	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	99579949	99579950	chr14:99579950:T:C	rs113574307	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr14	99579973	99579974	chr14:99579974:C:G	rs112761781	C	G	G	Hoxc9_MA0485.1	10	1	+	7.299806271334622	2.498735463587344	GGGCATTAATCAC
chr14	99672105	99672106	chr14:99672106:G:A	rs370337155	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr14	99871558	99871559	chr14:99871559:C:T	rs57128473	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr14	99875083	99875084	chr14:99875084:C:T	rs79232945	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr14	99875096	99875097	chr14:99875097:A:C	rs7152170	A	C	A	Hoxc9_MA0485.1	0	1	+	9.18725301904569	8.432359743151569	AGTCATCAATCAT
chr14	99953901	99953902	chr14:99953902:C:T	rs4905925	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr14	99964275	99964276	chr14:99964276:A:G	rs113104802	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr14	100281854	100281855	chr14:100281855:G:A	rs1042890	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr14	100360073	100360074	chr14:100360074:C:A	rs55730155	C	A	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr14	100360097	100360098	chr14:100360098:A:G	rs4900463	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr14	100447328	100447329	chr14:100447329:A:T	rs1203548	A	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr14	100610500	100610501	chr14:100610501:C:T	rs138037364	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr14	100610501	100610502	chr14:100610502:G:A	rs732565	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	100613536	100613537	chr14:100613537:C:T	rs12882635	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr14	100653135	100653136	chr14:100653136:T:C	rs12880207	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr14	100676552	100676553	chr14:100676553:G:A	rs730570	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr14	100692471	100692472	chr14:100692472:C:G	rs12880358	C	G	C	Hoxc9_MA0485.1	2	1	+	7.611572632371409	4.915688490650101	GGCTGTAAATTCC
chr14	100903443	100903444	chr14:100903444:G:T	rs143675300	G	T	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr14	101114090	101114091	chr14:101114091:C:T	rs146471627	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr14	101120555	101120556	chr14:101120556:T:C	rs3742413	T	C	T	Hoxc9_MA0485.1	11	1	-	9.949781922979298	5.53724852411093	TGTTATAAATCAT
chr14	101365027	101365028	chr14:101365028:C:T	rs117853011	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr14	101377624	101377625	chr14:101377625:A:G	rs12434334	A	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr14	101444288	101444289	chr14:101444289:C:T	rs371360272	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr14	101839724	101839725	chr14:101839725:C:G	rs2896431	C	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr14	101933510	101933511	chr14:101933511:C:T	rs140084989	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr14	102008094	102008095	chr14:102008095:C:T	chr14:102008095:C:T	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr14	102362168	102362169	chr14:102362169:T:C	rs7152157	T	C	T	Hoxc9_MA0485.1	4	1	-	8.21270975925909	7.0449460452675075	GACCATGAATCAG
chr14	102768812	102768813	chr14:102768813:A:C	rs768213848	A	C	A	Hoxc9_MA0485.1	0	1	+	7.91851582720891	7.16362255131479	AGCTGTCAATCAA
chr14	103162580	103162581	chr14:103162581:A:T	rs10149137	A	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr14	103198927	103198928	chr14:103198928:T:A	rs111621217	T	A	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr14	103634354	103634355	chr14:103634355:T:C	rs74812389	T	C	C	Hoxc9_MA0485.1	8	1	-	7.448733709190303	0.5467751990553424	GCCAGTGAATCAC
chr14	103854965	103854966	chr14:103854966:G:A	rs11625216	G	A	G	Hoxc9_MA0485.1	2	1	-	9.190899038754305	7.81388056159308	GACTGTAAATCAG
chr14	103962238	103962239	chr14:103962239:C:G	rs8021692	C	G	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr14	104188306	104188307	chr14:104188307:T:C	rs34620087	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr14	104320706	104320707	chr14:104320707:T:C	rs61997110	T	C	C	Hoxc9_MA0485.1	10	1	-	7.949027470473639	5.831956996600311	GGCCATCAATAAG
chr14	104321218	104321219	chr14:104321219:A:G	chr14:104321219:A:G	A	G	A	Hoxc9_MA0485.1	4	1	+	9.360122547084547	8.192358833092964	AGCAATAAATCCA
chr14	104356982	104356983	chr14:104356983:C:G	rs72706020	C	G	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr14	104357006	104357007	chr14:104357007:T:C	rs7144123	T	C	C	Hoxc9_MA0485.1	4	1	+	7.802809781377773	6.333498342444712	GGCCTTAAATCCC
chr14	104368055	104368056	chr14:104368056:T:C	rs56273236	T	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr14	104561600	104561601	chr14:104561601:G:C	rs4247024	G	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	104690072	104690073	chr14:104690073:G:A	rs3922890	G	A	G	Hoxc9_MA0485.1	0	1	+	8.21270975925909	7.679894625968088	GACCATGAATCAG
chr14	104749781	104749782	chr14:104749782:A:T	rs112760543	A	T	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr14	104843825	104843826	chr14:104843826:G:A	rs10130338	G	A	g	Hoxc9_MA0485.1	2	1	+	7.3503706511861875	8.126851820503742	GGGAGTAAATCTG
chr14	105267571	105267572	chr14:105267572:A:G	rs2816624	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr14	105717462	105717463	chr14:105717463:G:A	rs74093815	G	A	.	Hoxc9_MA0485.1	15	0	-	0	0	.
chr14	105755384	105755385	chr14:105755385:A:G	rs61985367	A	G	.	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr14	106006037	106006038	chr14:106006038:A:G	rs34062136	A	G	.	Hoxc9_MA0485.1	21	0	-	0	0	.
chr14	106203137	106203138	chr14:106203138:G:A	rs55938820	G	A	.	Hoxc9_MA0485.1	29	0	+	0	0	.
chr14	106276272	106276273	chr14:106276273:T:C	rs11626421	T	C	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr14	106276298	106276299	chr14:106276299:T:C	rs112954437	T	C	.	Hoxc9_MA0485.1	22	0	-	0	0	.
chr14	106373821	106373822	chr14:106373822:C:G	rs587742910	C	G	c	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr14	106418177	106418178	chr14:106418178:A:C	rs2106002	A	C	N	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr14	106549333	106549334	chr14:106549334:G:T	rs28498642	G	T	N	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr14	106593085	106593086	chr14:106593086:G:A	rs2731152	G	A	a	Hoxc9_MA0485.1	18	0	+	0	0	.
chr14	106708648	106708649	chr14:106708649:T:A	rs7143287	T	A	.	Hoxc9_MA0485.1	6	1	-	9.56096439601067	6.032239930473151	AGGAATAAATCAC
chr14	106778400	106778401	chr14:106778401:A:G	rs6576228	A	G	.	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	20356566	20356567	chr15:20356567:T:C	chr15:20356567:T:C	T	C	t	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr15	20356594	20356595	chr15:20356595:T:C	rs56245599	T	C	t	Hoxc9_MA0485.1	25	0	+	0	0	.
chr15	20386701	20386702	chr15:20386702:G:A	rs8028480	G	A	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	20388323	20388324	chr15:20388324:C:A	rs6599979	C	A	.	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	20388350	20388351	chr15:20388351:T:C	rs559677422	T	C	.	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	20645926	20645927	chr15:20645927:G:A	rs7496752	G	A	.	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	20645950	20645951	chr15:20645951:T:C	rs61999449	T	C	.	Hoxc9_MA0485.1	8	1	-	8.330273319336952	1.4283148092019904	TTCTGTAAATCAC
chr15	20648657	20648658	chr15:20648658:A:T	rs7182262	A	T	.	Hoxc9_MA0485.1	31	0	+	0	0	.
chr15	21264846	21264847	chr15:21264847:C:G	rs111640835	C	G	.	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	22221128	22221129	chr15:22221129:C:T	rs144178381	C	T	c	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	22221145	22221146	chr15:22221146:T:G	rs147777087	T	G	t	Hoxc9_MA0485.1	6	1	-	8.894012917068181	6.7206816217372	TCCAATAAATCTA
chr15	22224422	22224423	chr15:22224423:T:C	rs199825854	T	C	N	Hoxc9_MA0485.1	4	1	-	8.51128164130783	7.343517927316249	AGCCATCAATCCT
chr15	22242570	22242571	chr15:22242571:C:T	rs11854879	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	22253499	22253500	chr15:22253500:G:A	rs7496774	G	A	G	Hoxc9_MA0485.1	11	1	-	10.627688887946018	11.823089357636077	GGCCATAAATCCA
chr15	22774618	22774619	chr15:22774619:G:A	rs2347179	G	A	g	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	23180856	23180857	chr15:23180857:C:G	rs200274223	C	G	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	23803801	23803802	chr15:23803802:A:G	rs117902846	A	G	A	Hoxc9_MA0485.1	4	1	+	9.245694103222428	8.077930389230845	TGTAATAAATCTT
chr15	24624217	24624218	chr15:24624218:T:C	rs28693782	T	C	C	Hoxc9_MA0485.1	5	1	+	8.332242806568399	3.846931443929914	TGCAATAAATAAG
chr15	24919541	24919542	chr15:24919542:A:G	rs2736707	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	25066997	25066998	chr15:25066998:T:A	rs11633078	T	A	T	Hoxc9_MA0485.1	7	1	-	6.964412562030993	1.7685613531144169	GGCCTTCAATCAG
chr15	25534235	25534236	chr15:25534236:C:T	rs12904387	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	25566640	25566641	chr15:25566641:T:C	rs2526565	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr15	25736243	25736244	chr15:25736244:C:T	rs76763121	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr15	25736288	25736289	chr15:25736289:A:C	rs7178556	A	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	25971222	25971223	chr15:25971223:C:T	rs10162861	C	T	T	Hoxc9_MA0485.1	2	1	-	7.1314020230488575	7.907883192366412	ACGCGTAAATCTC
chr15	25971226	25971227	chr15:25971227:G:C	rs56344140	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	26083590	26083591	chr15:26083591:G:C	rs145217932	G	C	C	Hoxc9_MA0485.1	6	1	-	8.577011317333382	7.716136846154945	GGCTGTCAATCAG
chr15	26200759	26200760	chr15:26200760:A:G	rs73356546	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr15	26720649	26720650	chr15:26720650:C:G	rs12592816	C	G	C	Hoxc9_MA0485.1	6	1	-	7.256174374676255	8.117048845854692	GCTCATGAATCAG
chr15	26951024	26951025	chr15:26951025:A:G	rs6422910	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr15	27410924	27410925	chr15:27410925:G:A	rs72705745	G	A	G	Hoxc9_MA0485.1	2	1	-	8.271605052174266	6.894586575013043	GCCTGTAAATTAT
chr15	27421615	27421616	chr15:27421616:C:G	rs111533505	C	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	27426944	27426945	chr15:27426945:C:T	rs10152507	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr15	27562006	27562007	chr15:27562007:T:C	rs3098518	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	27844775	27844776	chr15:27844776:C:T	rs12592271	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr15	28013515	28013516	chr15:28013516:C:T	rs75452399	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	28043402	28043403	chr15:28043403:G:A	rs6497253	G	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr15	28274122	28274123	chr15:28274123:G:A	rs16950972	G	A	.	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	28794469	28794470	chr15:28794470:C:T	rs186596452	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr15	29044389	29044390	chr15:29044390:G:C	rs76916572	G	C	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	29099306	29099307	chr15:29099307:A:C	rs59831373	A	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	29159409	29159410	chr15:29159410:T:C	rs12911169	T	C	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	29551074	29551075	chr15:29551075:T:C	rs8029633	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	29551100	29551101	chr15:29551101:A:G	rs36004058	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr15	29820354	29820355	chr15:29820355:T:G	rs183618797	T	G	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	29938627	29938628	chr15:29938628:G:A	rs77571310	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	30065195	30065196	chr15:30065196:A:G	rs116577297	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr15	30492885	30492886	chr15:30492886:G:A	rs62017515	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	31024006	31024007	chr15:31024007:T:C	rs7182271	T	C	T	Hoxc9_MA0485.1	8	1	-	8.069917844668705	1.167959334533745	ACCCATTAATCAT
chr15	31113796	31113797	chr15:31113797:C:G	rs2338855	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr15	31113802	31113803	chr15:31113803:T:C	rs2338854	T	C	t	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	31352728	31352729	chr15:31352729:G:C	rs1807100	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr15	31404732	31404733	chr15:31404733:C:T	rs12441765	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr15	31462228	31462229	chr15:31462229:T:G	rs75885475	T	G	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr15	31471405	31471406	chr15:31471406:T:G	rs11071075	T	G	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	32097866	32097867	chr15:32097867:G:T	rs4779565	G	T	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr15	32743994	32743995	chr15:32743995:G:A	rs113632272	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr15	32793066	32793067	chr15:32793067:T:G	rs1258753	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	32893664	32893665	chr15:32893665:C:A	rs77647799	C	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	33027839	33027840	chr15:33027840:A:G	rs899127068	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	33111184	33111185	chr15:33111185:T:C	rs565086472	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr15	33126882	33126883	chr15:33126883:T:G	rs78434460	T	G	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr15	33126889	33126890	chr15:33126890:A:G	rs372495693	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	33155072	33155073	chr15:33155073:G:A	rs181717771	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	33155118	33155119	chr15:33155119:G:A	rs115347060	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr15	33347766	33347767	chr15:33347767:C:A	rs7183038	C	A	a	Hoxc9_MA0485.1	14	0	+	0	0	.
chr15	33460541	33460542	chr15:33460542:G:A	rs183158143	G	A	G	Hoxc9_MA0485.1	10	1	-	7.516307649266061	5.712471744957309	TGCTGTAAATCCA
chr15	33567451	33567452	chr15:33567452:G:A	rs721667	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	33592951	33592952	chr15:33592952:A:G	rs584877	A	G	A	Hoxc9_MA0485.1	4	1	+	8.713624831943834	7.54586111795225	GGACATCAATCAG
chr15	33679161	33679162	chr15:33679162:G:A	rs2339297	G	A	g	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr15	33779103	33779104	chr15:33779104:G:A	rs7169486	G	A	g	Hoxc9_MA0485.1	13	0	-	0	0	.
chr15	34049289	34049290	chr15:34049290:A:G	rs539584	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr15	34049308	34049309	chr15:34049309:G:A	rs587714	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr15	34425249	34425250	chr15:34425250:C:G	rs8035978	C	G	c	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr15	34493611	34493612	chr15:34493612:G:T	rs75155832	G	T	.	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	34524446	34524447	chr15:34524447:C:T	rs72625171	C	T	.	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	34855688	34855689	chr15:34855689:A:T	chr15:34855689:A:T	A	T	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	34986523	34986524	chr15:34986524:T:G	rs7176128	T	G	T	Hoxc9_MA0485.1	2	1	+	7.353494405624313	6.034628741064226	GGTAGTCAATCAG
chr15	35083672	35083673	chr15:35083673:C:T	rs12914998	C	T	-	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr15	35246902	35246903	chr15:35246903:T:C	rs318342	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr15	35628320	35628321	chr15:35628321:T:G	rs34883515	T	G	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	35675631	35675632	chr15:35675632:G:T	rs7163994	G	T	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr15	36079225	36079226	chr15:36079226:G:A	rs789869	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	36577917	36577918	chr15:36577918:C:T	rs4924084	C	T	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr15	36654712	36654713	chr15:36654713:C:T	rs10518897	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	36752920	36752921	chr15:36752921:G:A	rs12440276	G	A	G	Hoxc9_MA0485.1	2	1	-	9.354533716721772	7.977515239560547	GCCCATCAATCTC
chr15	36764000	36764001	chr15:36764001:C:G	rs2839754	C	G	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr15	36833966	36833967	chr15:36833967:A:T	rs11637327	A	T	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	36836861	36836862	chr15:36836862:A:G	rs6495875	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	36836865	36836866	chr15:36836866:A:G	rs6495876	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	37016467	37016468	chr15:37016468:C:T	rs150113488	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr15	37098733	37098734	chr15:37098734:C:A	rs1026423226	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr15	37106390	37106391	chr15:37106391:G:A	rs12591908	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	37123614	37123615	chr15:37123615:C:T	rs16964687	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr15	37199803	37199804	chr15:37199804:A:G	rs34474110	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	37372995	37372996	chr15:37372996:C:T	rs596347	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr15	37829289	37829290	chr15:37829290:G:A	rs4924193	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	37854087	37854088	chr15:37854088:C:G	rs12438154	C	G	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	38149544	38149545	chr15:38149545:G:A	rs10744968	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr15	38187233	38187234	chr15:38187234:T:C	rs55810958	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr15	38755237	38755238	chr15:38755238:T:C	rs4489979	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr15	38860233	38860234	chr15:38860234:T:A	rs11633114	T	A	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr15	38902576	38902577	chr15:38902577:G:A	rs11073362	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	38941739	38941740	chr15:38941740:C:T	rs1433878	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr15	38941787	38941788	chr15:38941788:C:G	rs75276651	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	39023612	39023613	chr15:39023613:C:G	rs973931	C	G	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	39127232	39127233	chr15:39127233:G:A	rs12594760	G	A	G	Hoxc9_MA0485.1	10	1	-	7.540260434766821	5.736424530458069	GGCAGTAAAACAT
chr15	39199751	39199752	chr15:39199752:G:A	rs78238585	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	39263071	39263072	chr15:39263072:A:G	rs144399931	A	G	A	Hoxc9_MA0485.1	11	1	-	8.515734750294119	7.320334280604062	GGTTGTAAATCTG
chr15	39364975	39364976	chr15:39364976:G:A	rs55948686	G	A	G	Hoxc9_MA0485.1	1	1	-	7.528122768056844	6.584322928811978	GCCCATCAATAAC
chr15	39580125	39580126	chr15:39580126:C:T	chr15:39580126:C:T	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr15	39641711	39641712	chr15:39641712:C:T	rs2898686	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr15	39757593	39757594	chr15:39757594:T:A	rs1166716	T	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	39843652	39843653	chr15:39843653:G:A	rs440383	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr15	39942544	39942545	chr15:39942545:T:C	rs571256	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	39970262	39970263	chr15:39970263:A:G	rs17721366	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	40021989	40021990	chr15:40021990:A:G	rs11635537	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	40030350	40030351	chr15:40030351:G:T	rs2250402	G	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	40092566	40092567	chr15:40092567:C:T	rs80056127	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	40112696	40112697	chr15:40112697:G:T	rs62019961	G	T	G	Hoxc9_MA0485.1	2	1	-	11.134583485055895	9.215180512652141	ACCCATAAATCAG
chr15	40423796	40423797	chr15:40423797:G:A	rs72733444	G	A	G	Hoxc9_MA0485.1	3	1	-	9.10933503268645	8.221082259663827	TCTCATAAATCAA
chr15	41305238	41305239	chr15:41305239:T:A	rs1132639	T	A	t	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	41332085	41332086	chr15:41332086:C:A	rs4923899	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	41839766	41839767	chr15:41839767:A:G	rs57498313	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr15	41930344	41930345	chr15:41930345:A:G	rs116116206	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	42027338	42027339	chr15:42027339:C:T	rs2665205	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr15	42046496	42046497	chr15:42046497:A:G	rs11070356	A	G	A	Hoxc9_MA0485.1	8	1	+	9.184132492623139	2.2821739824881804	TGCCATCAATCTT
chr15	42046519	42046520	chr15:42046520:G:A	rs72727719	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr15	42101986	42101987	chr15:42101987:T:C	rs77512125	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr15	42119760	42119761	chr15:42119761:C:T	rs74011732	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr15	42228211	42228212	chr15:42228212:A:G	rs72718869	A	G	A	Hoxc9_MA0485.1	4	1	+	9.337081915316285	8.1693182013247	AATCATAAATCAG
chr15	42832757	42832758	chr15:42832758:T:C	rs114513138	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	44081688	44081689	chr15:44081689:A:G	rs12903579	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	44568518	44568519	chr15:44568519:G:A	rs1281233941	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr15	45167331	45167332	chr15:45167332:G:A	rs898725462	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr15	45254894	45254895	chr15:45254895:C:T	rs8041702	C	T	T	Hoxc9_MA0485.1	2	1	+	8.573929745299797	7.196911268138574	GGCCGTTAATCAT
chr15	45254915	45254916	chr15:45254916:T:C	rs11629858	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	45254922	45254923	chr15:45254923:T:G	rs11629859	T	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	45307171	45307172	chr15:45307172:A:C	rs2461711	A	C	A	Hoxc9_MA0485.1	7	1	+	10.862989589075674	3.958760519870098	GGCCATAAATTTC
chr15	45356073	45356074	chr15:45356074:A:G	rs2056493	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr15	45654418	45654419	chr15:45654419:A:G	rs11632553	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr15	45798784	45798785	chr15:45798785:G:A	rs2460629	G	A	G	Hoxc9_MA0485.1	1	1	-	9.003131149634207	8.059331310389341	GCCAATAAATTAA
chr15	45862137	45862138	chr15:45862138:G:C	rs117437423	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr15	45912893	45912894	chr15:45912894:T:A	rs16948973	T	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	46595933	46595934	chr15:46595934:T:A	rs16957081	T	A	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr15	47196271	47196272	chr15:47196272:A:G	rs76128746	A	G	A	Hoxc9_MA0485.1	12	1	-	9.208878326000379	9.462875279764932	AGCCATTAATCAT
chr15	47364535	47364536	chr15:47364536:C:A	rs488695	C	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	47721515	47721516	chr15:47721516:C:A	rs1439320	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr15	47756421	47756422	chr15:47756422:G:A	rs78751548	G	A	G	Hoxc9_MA0485.1	0	1	-	9.222605208872702	9.454948866392069	CGCAGTAAATCTT
chr15	48006051	48006052	chr15:48006052:T:C	rs1030399	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr15	48249906	48249907	chr15:48249907:G:A	rs2279367	G	A	G	Hoxc9_MA0485.1	1	1	+	10.731830812949676	9.172387239039615	GGCAATAAATTAT
chr15	48407731	48407732	chr15:48407732:T:C	rs2114438	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	48459555	48459556	chr15:48459556:C:A	rs114485955	C	A	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr15	48582624	48582625	chr15:48582625:T:C	rs16961190	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	48697646	48697647	chr15:48697647:G:T	rs1478346	G	T	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	49083127	49083128	chr15:49083128:T:C	rs2413931	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr15	49468227	49468228	chr15:49468228:G:T	rs2413959	G	T	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr15	49758987	49758988	chr15:49758988:T:C	rs74014156	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	49826927	49826928	chr15:49826928:C:T	rs4393520	C	T	C	Hoxc9_MA0485.1	1	1	+	8.04188692532205	7.098087086077185	TCCCATGAATCAT
chr15	49844803	49844804	chr15:49844804:G:A	rs35827271	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr15	49977475	49977476	chr15:49977476:G:A	rs10519251	G	A	g	Hoxc9_MA0485.1	32	0	+	0	0	.
chr15	50065545	50065546	chr15:50065546:G:T	rs7172615	G	T	G	Hoxc9_MA0485.1	3	1	-	10.06510328897756	9.330352081407092	ATCCATAAATCAA
chr15	50675485	50675486	chr15:50675486:T:G	rs28557300	T	G	T	Hoxc9_MA0485.1	7	1	-	7.301583403090036	0.39735433388445923	GGCCGTAAATGAT
chr15	50873939	50873940	chr15:50873940:G:T	rs2614769	G	T	-	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	50873944	50873945	chr15:50873945:T:A	rs2243908	T	A	-	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr15	51183454	51183455	chr15:51183455:T:G	rs62020072	T	G	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	51218504	51218505	chr15:51218505:T:A	rs1143704	T	A	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr15	51266224	51266225	chr15:51266225:G:A	rs3889391	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	51304341	51304342	chr15:51304342:T:C	rs8031463	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr15	51323418	51323419	chr15:51323419:T:C	rs2445761	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr15	51374422	51374423	chr15:51374423:G:A	rs116619337	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr15	51404224	51404225	chr15:51404225:T:G	rs2459399	T	G	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr15	51602072	51602073	chr15:51602073:A:T	rs11070861	A	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr15	51829258	51829259	chr15:51829259:T:C	rs150107066	T	C	T	Hoxc9_MA0485.1	6	1	-	10.041718649816586	7.007512883307165	AGGCATAAATCAT
chr15	51831618	51831619	chr15:51831619:G:A	rs6493525	G	A	G	Hoxc9_MA0485.1	2	1	-	8.76043559189816	7.383417114736939	AGCCATCAATTAT
chr15	52232460	52232461	chr15:52232461:T:C	rs138128763	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	52257934	52257935	chr15:52257935:G:A	rs116951989	G	A	G	Hoxc9_MA0485.1	12	1	-	8.546591587395653	8.2925946336311	TGCTATGAATCAC
chr15	52257942	52257943	chr15:52257943:T:C	rs4257157	T	C	T	Hoxc9_MA0485.1	4	1	-	8.546591587395653	7.3788278734040675	TGCTATGAATCAC
chr15	52265297	52265298	chr15:52265298:C:T	rs79704026	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr15	52287141	52287142	chr15:52287142:G:C	chr15:52287142:G:C	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr15	52409229	52409230	chr15:52409230:C:T	rs1724629	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr15	52778802	52778803	chr15:52778803:G:A	rs1357	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	52871584	52871585	chr15:52871585:A:C	rs7161750	A	C	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	53586750	53586751	chr15:53586751:T:C	rs1906433	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	54150529	54150530	chr15:54150530:G:A	rs8038718	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	54304324	54304325	chr15:54304325:G:A	rs4471623	G	A	G	Hoxc9_MA0485.1	12	1	-	7.672697583937022	7.418700630172471	GTCAATGAATCAC
chr15	54304342	54304343	chr15:54304343:C:T	rs16974482	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr15	54547708	54547709	chr15:54547709:T:C	rs75215111	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	54576469	54576470	chr15:54576470:G:T	rs2553218	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr15	55008643	55008644	chr15:55008644:G:A	rs138284729	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	55907900	55907901	chr15:55907901:G:T	rs16976645	G	T	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr15	55982334	55982335	chr15:55982335:G:C	rs80025455	G	C	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	55986962	55986963	chr15:55986963:T:C	rs7179050	T	C	-	Hoxc9_MA0485.1	7	1	-	10.822721577896212	3.918492508690635	GACTATAAATCAT
chr15	56038218	56038219	chr15:56038219:C:T	rs575891755	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	56041953	56041954	chr15:56041954:G:C	rs182991581	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	56568112	56568113	chr15:56568113:A:G	rs2676206	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	56737222	56737223	chr15:56737223:A:T	rs147071122	A	T	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr15	56795800	56795801	chr15:56795801:G:A	rs12324492	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	56817441	56817442	chr15:56817442:A:G	rs369415920	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	57182904	57182905	chr15:57182905:T:C	rs1870870	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	57220569	57220570	chr15:57220570:A:T	rs111494885	A	T	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr15	57328577	57328578	chr15:57328578:G:A	rs4534776	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	57381861	57381862	chr15:57381862:G:A	rs76074970	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr15	57517055	57517056	chr15:57517056:A:G	rs16977563	A	G	a	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	57648063	57648064	chr15:57648064:T:C	rs2042698	T	C	C	Hoxc9_MA0485.1	3	1	-	9.9425116879278	5.160866423512576	CACAATAAATCAC
chr15	57728686	57728687	chr15:57728687:A:G	rs2554034	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr15	57982790	57982791	chr15:57982791:G:A	rs4646609	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	57993189	57993190	chr15:57993190:C:A	rs4646607	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr15	58222042	58222043	chr15:58222043:C:T	rs1663255	C	T	C	Hoxc9_MA0485.1	10	1	+	9.528894576155547	7.725058671846797	GACAATAAATCTA
chr15	58270000	58270001	chr15:58270001:T:C	rs77767481	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	58285335	58285336	chr15:58285336:G:A	rs17240706	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	58307075	58307076	chr15:58307076:A:G	rs1444939	A	G	a	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr15	58307090	58307091	chr15:58307091:T:G	rs2043086	T	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr15	58307093	58307094	chr15:58307094:C:T	rs2043087	C	T	T	Hoxc9_MA0485.1	1	1	+	7.466084336938548	6.522284497693683	CCCTGTAAATCTG
chr15	58340361	58340362	chr15:58340362:C:G	rs117703382	C	G	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	58355080	58355081	chr15:58355081:C:G	rs79924751	C	G	C	Hoxc9_MA0485.1	12	1	+	7.33207409996618	6.614018321051303	CCCAATCAATCTC
chr15	58467147	58467148	chr15:58467148:G:A	rs115089758	G	A	G	Hoxc9_MA0485.1	1	1	+	7.973534707971797	6.414091134061737	GGAAATAAATCCA
chr15	58470177	58470178	chr15:58470178:G:C	rs7162603	G	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	58669034	58669035	chr15:58669035:C:T	rs6494032	C	T	C	Hoxc9_MA0485.1	1	1	+	9.075646906357997	8.131847067113132	ACACATAAATCTC
chr15	58735026	58735027	chr15:58735027:T:C	rs74017297	T	C	T	Hoxc9_MA0485.1	3	1	-	9.479856180119201	4.698210915703979	AGAAATAAATCTC
chr15	58900393	58900394	chr15:58900394:A:G	rs4545744	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	59245008	59245009	chr15:59245009:C:G	rs17190833	C	G	C	Hoxc9_MA0485.1	1	1	-	9.89275322745534	8.753792746123668	GGCTGTAAATCTG
chr15	59300670	59300671	chr15:59300671:C:T	rs148052770	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr15	59300673	59300674	chr15:59300674:G:C	rs567939673	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	59354416	59354417	chr15:59354417:C:A	rs139497982	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr15	59360513	59360514	chr15:59360514:A:G	chr15:59360514:A:G	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	59369204	59369205	chr15:59369205:C:T	rs7178041	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	59479950	59479951	chr15:59479951:G:A	rs60263751	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr15	59674449	59674450	chr15:59674450:T:A	rs7497974	T	A	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	59674847	59674848	chr15:59674848:C:T	rs11071469	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr15	59828910	59828911	chr15:59828911:G:A	rs34835177	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	59965708	59965709	chr15:59965709:G:C	rs1365116	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	60008143	60008144	chr15:60008144:G:A	rs12323976	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr15	60008155	60008156	chr15:60008156:C:T	rs12323969	C	T	C	Hoxc9_MA0485.1	1	1	-	8.125883756435943	6.5664401825258825	CGCCATAAATTCT
chr15	60255537	60255538	chr15:60255538:C:T	rs150761743	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	60318695	60318696	chr15:60318696:T:C	rs11071516	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr15	60328982	60328983	chr15:60328983:G:A	rs112512305	G	A	G	Hoxc9_MA0485.1	2	1	-	8.410733877476908	7.033715400315682	GTCCATCAATCTC
chr15	60329002	60329003	chr15:60329003:G:C	rs17270104	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	60371334	60371335	chr15:60371335:T:C	rs34073202	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr15	60479641	60479642	chr15:60479642:T:C	chr15:60479642:T:C	T	C	T	Hoxc9_MA0485.1	6	1	-	9.595317011472867	6.561111244963448	GTCAATAAATCTT
chr15	60479641	60479642	chr15:60479642:T:G	rs72746698	T	G	T	Hoxc9_MA0485.1	6	1	-	9.595317011472867	7.4219857161418865	GTCAATAAATCTT
chr15	60521529	60521530	chr15:60521530:C:T	rs28683768	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	60997988	60997989	chr15:60997989:C:T	rs10519097	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	61090614	61090615	chr15:61090615:G:T	rs76853459	G	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr15	61647720	61647721	chr15:61647721:T:C	rs139232701	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr15	61760006	61760007	chr15:61760007:G:A	rs12903441	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	61829408	61829409	chr15:61829409:A:G	rs8023607	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	62439871	62439872	chr15:62439872:A:G	rs77100938	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	62456419	62456420	chr15:62456420:G:C	rs78205844	G	C	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	62464111	62464112	chr15:62464112:A:T	rs4775506	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr15	62493116	62493117	chr15:62493117:C:T	rs1034013349	C	T	C	Hoxc9_MA0485.1	3	1	+	9.406770069116005	8.518517296093382	GGGCGTAAATCAT
chr15	62552378	62552379	chr15:62552379:C:T	rs4775514	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr15	62995453	62995454	chr15:62995454:G:A	rs115267876	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr15	63003921	63003922	chr15:63003922:C:T	rs16946240	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	63246703	63246704	chr15:63246704:A:G	rs76080506	A	G	A	Hoxc9_MA0485.1	0	1	-	9.306970670261693	9.074627012742324	TGCAATCAATCAT
chr15	63255718	63255719	chr15:63255719:C:T	rs140528015	C	T	C	Hoxc9_MA0485.1	0	1	+	9.296356763622768	9.528700421142135	CTCCATAAATCTC
chr15	63396627	63396628	chr15:63396628:C:G	rs28678344	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr15	63503259	63503260	chr15:63503260:G:C	rs74022985	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	63552545	63552546	chr15:63552546:A:G	rs17766277	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	63708175	63708176	chr15:63708176:C:A	rs145211343	C	A	C	Hoxc9_MA0485.1	2	1	+	8.708024148758403	6.78862117635465	GGCAATAAAACAT
chr15	63752255	63752256	chr15:63752256:T:C	rs144739879	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	63764455	63764456	chr15:63764456:C:T	rs117856030	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	63838742	63838743	chr15:63838743:T:C	rs7166249	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	63892162	63892163	chr15:63892163:C:T	rs6494449	C	T	C	Hoxc9_MA0485.1	1	1	+	7.2982587758532755	6.3544589366084105	GCCCATGAATCCC
chr15	64039112	64039113	chr15:64039113:T:C	rs895886	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	64247152	64247153	chr15:64247153:A:C	rs117413567	A	C	A	Hoxc9_MA0485.1	11	1	-	9.797253085752335	6.242309072092989	ATCCATAAATCTT
chr15	64882598	64882599	chr15:64882599:C:T	rs541781618	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	65034494	65034495	chr15:65034495:T:A	rs12906662	T	A	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr15	65076210	65076211	chr15:65076211:G:A	rs115380287	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr15	65076698	65076699	chr15:65076699:T:G	rs148856967	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	65408596	65408597	chr15:65408597:A:T	rs149292842	A	T	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	66024677	66024678	chr15:66024678:A:G	rs77011346	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	66090197	66090198	chr15:66090198:C:T	rs140878933	C	T	C	Hoxc9_MA0485.1	3	1	+	8.717855277493793	7.829602504471171	AGTCATAAATCCA
chr15	66189823	66189824	chr15:66189824:G:C	rs75587534	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr15	66298392	66298393	chr15:66298393:C:T	rs12914520	C	T	C	Hoxc9_MA0485.1	12	1	+	8.655163813779609	8.401166860015056	AAACATAAATCTC
chr15	66376268	66376269	chr15:66376269:C:T	rs34514523	C	T	-	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	66393469	66393470	chr15:66393470:C:T	rs78198355	C	T	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr15	66401529	66401530	chr15:66401530:G:C	rs35945138	G	C	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr15	66458980	66458981	chr15:66458981:A:C	rs977359766	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	66503851	66503852	chr15:66503852:G:A	rs36116789	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr15	66763700	66763701	chr15:66763701:G:T	rs7170982	G	T	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	66763722	66763723	chr15:66763723:C:T	rs28514905	C	T	C	Hoxc9_MA0485.1	12	1	+	7.877219804552811	7.6232228507882605	ACATGTAAATCAC
chr15	66828232	66828233	chr15:66828233:G:A	rs4776323	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr15	66853582	66853583	chr15:66853583:A:C	chr15:66853583:A:C	A	C	A	Hoxc9_MA0485.1	11	1	+	9.121048428706384	7.068058573807304	GGCATTAAATCAC
chr15	66930093	66930094	chr15:66930094:A:G	rs266367	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	66940991	66940992	chr15:66940992:C:G	rs12439732	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	66949752	66949753	chr15:66949753:C:T	rs904368	C	T	c	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr15	66976944	66976945	chr15:66976945:T:C	rs4776862	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	67088032	67088033	chr15:67088033:C:T	rs74019899	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr15	67125866	67125867	chr15:67125867:G:A	rs16950635	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr15	67146224	67146225	chr15:67146225:T:G	rs17227716	T	G	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	67150526	67150527	chr15:67150527:T:C	chr15:67150527:T:C	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr15	67207991	67207992	chr15:67207992:T:C	rs4776905	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	67208003	67208004	chr15:67208004:G:A	rs760505673	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	67645995	67645996	chr15:67645996:G:C	rs7172055	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	67685253	67685254	chr15:67685254:G:A	rs186974458	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr15	67785291	67785292	chr15:67785292:A:G	rs7175517	A	G	A	Hoxc9_MA0485.1	4	1	+	9.873022997418722	8.70525928342714	GGATATAAATCAA
chr15	67850727	67850728	chr15:67850728:C:G	rs73431978	C	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	67901610	67901611	chr15:67901611:C:T	rs7163687	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr15	68026690	68026691	chr15:68026691:T:C	rs138647405	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	68273078	68273079	chr15:68273079:A:G	rs114560020	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	68315001	68315002	chr15:68315002:T:C	rs367719634	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	68407511	68407512	chr15:68407512:G:T	rs77603163	G	T	G	Hoxc9_MA0485.1	10	1	-	8.58366058760122	5.899660253727268	AGTCATCAATCTC
chr15	68418641	68418642	chr15:68418642:A:G	rs74909003	A	G	A	Hoxc9_MA0485.1	8	1	+	8.239633713745182	1.3376752036102215	TGATGTAAATCAT
chr15	68561087	68561088	chr15:68561088:C:G	rs188004353	C	G	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	68637912	68637913	chr15:68637913:A:C	chr15:68637913:A:C	A	C	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	68654123	68654124	chr15:68654124:C:T	rs2046925	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr15	68700641	68700642	chr15:68700642:T:C	rs566151824	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	69100052	69100053	chr15:69100053:G:A	rs4777114	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	69107215	69107216	chr15:69107216:T:C	rs12440912	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr15	69359497	69359498	chr15:69359498:G:A	rs11072090	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	69453754	69453755	chr15:69453755:G:A	chr15:69453755:G:A	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	69538314	69538315	chr15:69538315:A:G	rs75020312	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr15	69665188	69665189	chr15:69665189:C:T	rs118075852	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	69692253	69692254	chr15:69692254:C:T	rs4777179	C	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr15	69699774	69699775	chr15:69699775:T:C	rs10220831	T	C	C	Hoxc9_MA0485.1	7	1	-	7.750936640443904	0.8467075712383256	TGTCGTCAATCAC
chr15	69759245	69759246	chr15:69759246:G:A	rs142223626	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	69805703	69805704	chr15:69805704:G:A	rs57594052	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr15	69818848	69818849	chr15:69818849:C:T	rs6494829	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr15	69909041	69909042	chr15:69909042:T:C	rs4776485	T	C	T	Hoxc9_MA0485.1	4	1	-	9.317265960238144	8.14950224624656	TACAATAAATCTC
chr15	69911449	69911450	chr15:69911450:G:A	rs17678460	G	A	G	Hoxc9_MA0485.1	4	1	+	7.3825037697794675	8.55026748377105	GTCCGTCAATCAG
chr15	69911469	69911470	chr15:69911470:C:T	rs8025511	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	69916142	69916143	chr15:69916143:C:T	rs2601896	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr15	70008672	70008673	chr15:70008673:C:T	rs11072128	C	T	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	70061147	70061148	chr15:70061148:G:A	rs77426363	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	70133903	70133904	chr15:70133904:C:T	rs8038188	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr15	70149975	70149976	chr15:70149976:T:C	rs61999959	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	70182858	70182859	chr15:70182859:C:T	rs4777249	C	T	C	Hoxc9_MA0485.1	12	1	+	9.176383307833065	8.922386354068513	GTTTATAAATCAC
chr15	70230070	70230071	chr15:70230071:T:G	rs28611447	T	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	70309490	70309491	chr15:70309491:T:G	rs56219474	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	70526822	70526823	chr15:70526823:A:G	rs7162398	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	70575753	70575754	chr15:70575754:T:C	rs185400861	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr15	70575945	70575946	chr15:70575946:G:A	rs1896437	G	A	A	Hoxc9_MA0485.1	1	1	+	8.90996022303787	7.350516649127811	AGCCATAAAACAT
chr15	70775245	70775246	chr15:70775246:T:C	rs7162623	T	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr15	70792306	70792307	chr15:70792307:C:G	rs75455152	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr15	70817282	70817283	chr15:70817283:A:G	rs74023642	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr15	70976843	70976844	chr15:70976844:T:G	rs755141953	T	G	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	71123995	71123996	chr15:71123996:C:T	rs17784142	C	T	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr15	71279327	71279328	chr15:71279328:C:A	rs116686879	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	71279328	71279329	chr15:71279329:G:A	rs924242475	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr15	71279363	71279364	chr15:71279364:C:T	rs12903080	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	71335565	71335566	chr15:71335566:G:T	rs66652712	G	T	T	Hoxc9_MA0485.1	3	1	-	8.048292537714016	7.313541330143546	ACTCATCAATCAT
chr15	71559899	71559900	chr15:71559900:T:C	rs56028454	T	C	T	Hoxc9_MA0485.1	4	1	-	9.874241427740653	8.70647771374907	GGCAATAAATTTT
chr15	71652043	71652044	chr15:71652044:T:C	rs573315245	T	C	T	Hoxc9_MA0485.1	3	1	+	8.32367372214757	9.211926495170193	CCCTGTAAATCAG
chr15	71686285	71686286	chr15:71686286:A:G	rs16956073	A	G	A	Hoxc9_MA0485.1	3	1	-	7.552445552634791	8.440698325657417	GCATGTAAATCTC
chr15	71688208	71688209	chr15:71688209:C:A	chr15:71688209:C:A	C	A	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr15	71747461	71747462	chr15:71747462:T:C	rs12101956	T	C	T	Hoxc9_MA0485.1	4	1	-	9.483752099051978	8.315988385060395	TCCAATAAATCTT
chr15	71747725	71747726	chr15:71747726:T:G	rs114104579	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr15	71801426	71801427	chr15:71801427:G:C	rs765262604	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr15	72376197	72376198	chr15:72376198:T:C	rs4777505	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr15	72486355	72486356	chr15:72486356:A:G	rs62017907	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr15	72835470	72835471	chr15:72835471:A:T	rs114938359	A	T	a	Hoxc9_MA0485.1	26	0	-	0	0	.
chr15	73746128	73746129	chr15:73746129:T:G	rs74023528	T	G	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr15	74007528	74007529	chr15:74007529:A:G	rs10162627	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr15	74011007	74011008	chr15:74011008:C:A	rs11072463	C	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	74134976	74134977	chr15:74134977:G:A	rs116064406	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	74648191	74648192	chr15:74648192:A:G	rs115644602	A	G	A	Hoxc9_MA0485.1	5	1	-	9.225859226354649	4.740547863716164	AGAAATAAATCTT
chr15	74950715	74950716	chr15:74950716:T:C	rs111513933	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	75450231	75450232	chr15:75450232:A:G	rs116616506	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr15	75732958	75732959	chr15:75732959:C:T	rs146704990	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr15	75732980	75732981	chr15:75732981:G:A	rs770309298	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	75833036	75833037	chr15:75833037:A:C	rs2675221	A	C	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr15	76161993	76161994	chr15:76161994:C:T	rs2959860	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr15	77020109	77020110	chr15:77020110:A:G	rs16968625	A	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr15	77058037	77058038	chr15:77058038:C:T	rs112526267	C	T	C	Hoxc9_MA0485.1	12	1	+	11.852639263970774	11.598642310206221	ACCCATAAATCAC
chr15	77094624	77094625	chr15:77094625:C:T	rs138928930	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	77186902	77186903	chr15:77186903:A:C	rs56935286	A	C	A	Hoxc9_MA0485.1	7	1	+	7.932332041818047	1.0281029726124697	GGCAATCAATAAC
chr15	77243442	77243443	chr15:77243443:T:C	rs16968730	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	77312051	77312052	chr15:77312052:T:A	rs1045043454	T	A	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr15	77546219	77546220	chr15:77546220:T:A	rs921212650	T	A	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	77551929	77551930	chr15:77551930:G:C	rs907370	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	77865031	77865032	chr15:77865032:G:A	chr15:77865032:G:A	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	77865031	77865032	chr15:77865032:G:T	rs74636142	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	77870650	77870651	chr15:77870651:C:A	rs74029404	C	A	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	77870656	77870657	chr15:77870657:G:C	rs142608344	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	77983040	77983041	chr15:77983041:C:T	rs57949748	C	T	-	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr15	77983052	77983053	chr15:77983053:T:C	rs58226358	T	C	-	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr15	78233651	78233652	chr15:78233652:G:A	rs11634386	G	A	G	Hoxc9_MA0485.1	0	1	+	7.119700543551208	6.586885410260206	GGACACAAATCAC
chr15	78245638	78245639	chr15:78245639:G:A	rs11633894	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr15	78245647	78245648	chr15:78245648:T:C	rs12916024	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr15	78322449	78322450	chr15:78322450:T:C	chr15:78322450:T:C	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	78728694	78728695	chr15:78728695:T:C	rs2869554	T	C	-	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	78737784	78737785	chr15:78737785:G:A	rs28435088	G	A	-	Hoxc9_MA0485.1	3	1	-	8.885838743672362	7.997585970649738	AGCCGTAAATAAT
chr15	78740401	78740402	chr15:78740402:G:A	rs2017091	G	A	N	Hoxc9_MA0485.1	15	0	+	0	0	.
chr15	78798572	78798573	chr15:78798573:C:T	chr15:78798573:C:T	C	T	c	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr15	78833346	78833347	chr15:78833347:C:G	rs6495337	C	G	g	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	78871839	78871840	chr15:78871840:C:T	rs114365497	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr15	78872348	78872349	chr15:78872349:T:C	rs74024471	T	C	T	Hoxc9_MA0485.1	3	1	+	8.409840955340762	9.298093728363385	GGCTATCAATCCC
chr15	78908042	78908043	chr15:78908043:T:C	rs79800329	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	78908059	78908060	chr15:78908060:T:C	rs16970244	T	C	T	Hoxc9_MA0485.1	3	1	+	9.044983518544395	9.93323629156702	ACATATAAATCAC
chr15	79169173	79169174	chr15:79169174:A:G	rs11072826	A	G	A	Hoxc9_MA0485.1	4	1	+	7.806208778210078	6.638445064218495	GGCCATGAATAAC
chr15	79173962	79173963	chr15:79173963:A:G	rs28609301	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr15	79365623	79365624	chr15:79365624:A:T	rs76307123	A	T	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr15	79562786	79562787	chr15:79562787:T:C	rs3120637	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	79687413	79687414	chr15:79687414:G:A	rs12148723	G	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	79687416	79687417	chr15:79687417:C:G	rs56897944	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr15	79944889	79944890	chr15:79944890:A:G	rs2006863	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr15	80017434	80017435	chr15:80017435:T:C	rs4542621	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr15	80215393	80215394	chr15:80215394:A:T	rs71397601	A	T	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr15	80291134	80291135	chr15:80291135:T:C	rs4468566	T	C	T	Hoxc9_MA0485.1	3	1	-	8.830925348954224	4.049280084539002	CACAATAAATCTT
chr15	80534061	80534062	chr15:80534062:T:G	rs4128219	T	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	80579591	80579592	chr15:80579592:G:A	rs188577274	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	80609827	80609828	chr15:80609828:T:C	rs74027886	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	80834565	80834566	chr15:80834566:C:T	rs7172022	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr15	80856950	80856951	chr15:80856951:A:G	rs59006692	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	80856965	80856966	chr15:80856966:A:C	rs980628819	A	C	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr15	81098098	81098099	chr15:81098099:A:G	rs116705242	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr15	81113582	81113583	chr15:81113583:G:A	rs75964790	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	81291139	81291140	chr15:81291140:G:A	rs7171517	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	81414622	81414623	chr15:81414623:C:A	rs28522466	C	A	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr15	81504189	81504190	chr15:81504190:A:G	rs28369041	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr15	81595971	81595972	chr15:81595972:C:T	rs117187002	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr15	82300527	82300528	chr15:82300528:A:G	rs62010075	A	G	N	Hoxc9_MA0485.1	2	1	-	8.378439427352337	9.75545790451356	GGTAATGAATCAC
chr15	82300535	82300536	chr15:82300536:G:A	rs1182651805	G	A	g	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr15	82675518	82675519	chr15:82675519:A:G	rs7163990	A	G	A	Hoxc9_MA0485.1	4	1	+	10.005152189781171	8.837388475789588	TGCTATAAATCTG
chr15	82730239	82730240	chr15:82730240:C:T	rs34191802	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr15	82836834	82836835	chr15:82836835:G:A	rs1313577038	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr15	82849765	82849766	chr15:82849766:G:A	rs34287296	G	A	g	Hoxc9_MA0485.1	4	1	+	7.694715053136086	8.862478767127667	GGTCGTCAATCTT
chr15	83606227	83606228	chr15:83606228:A:G	rs1896796	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	83868246	83868247	chr15:83868247:T:C	rs4842918	T	C	C	Hoxc9_MA0485.1	3	1	+	9.069141205770404	9.957393978793029	AGCTATGAATCAC
chr15	83944050	83944051	chr15:83944051:T:C	rs115682838	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr15	83972265	83972266	chr15:83972266:T:G	rs12148239	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr15	84389493	84389494	chr15:84389494:C:G	rs62028145	C	G	.	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr15	84901158	84901159	chr15:84901159:C:T	rs62020869	C	T	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr15	84960047	84960048	chr15:84960048:A:G	rs72754976	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	84993645	84993646	chr15:84993646:A:G	rs7359256	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	85004584	85004585	chr15:85004585:A:G	rs2122858	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr15	85330404	85330405	chr15:85330405:G:A	rs74024816	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	85330436	85330437	chr15:85330437:A:C	rs7167312	A	C	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr15	85373528	85373529	chr15:85373529:A:G	rs72750800	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr15	85457271	85457272	chr15:85457272:C:T	rs4407021	C	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr15	85486365	85486366	chr15:85486366:G:A	rs6497209	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	85531340	85531341	chr15:85531341:G:C	rs74025608	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr15	85775421	85775422	chr15:85775422:G:A	rs11631009	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	85777412	85777413	chr15:85777413:A:G	rs2542595	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr15	85831941	85831942	chr15:85831942:T:G	rs16945023	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr15	85840427	85840428	chr15:85840428:A:C	rs13380162	A	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	86006687	86006688	chr15:86006688:G:A	rs8023930	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	86384387	86384388	chr15:86384388:T:G	chr15:86384388:T:G	T	G	T	Hoxc9_MA0485.1	7	1	-	7.223089171788302	0.31886010258272274	CCCCATCAATCTA
chr15	86556138	86556139	chr15:86556139:A:G	rs73459654	A	G	A	Hoxc9_MA0485.1	11	1	+	9.22445590901292	4.811922510144552	CACAATAAATCAG
chr15	86611619	86611620	chr15:86611620:C:T	rs55650546	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	86776071	86776072	chr15:86776072:G:A	rs6496362	G	A	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr15	86800518	86800519	chr15:86800519:T:C	rs16977995	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	86906115	86906116	chr15:86906116:A:T	rs112539737	A	T	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr15	86973562	86973563	chr15:86973563:C:T	rs147078591	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr15	87016247	87016248	chr15:87016248:T:A	rs1897654	T	A	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr15	87021825	87021826	chr15:87021826:G:C	rs1579553	G	C	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	87110676	87110677	chr15:87110677:T:C	rs8031602	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	87212299	87212300	chr15:87212300:C:A	rs11852610	C	A	C	Hoxc9_MA0485.1	10	1	+	8.02732382697474	5.34332349310079	TGGTATAAATCTC
chr15	87419455	87419456	chr15:87419456:T:C	rs1442295	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	87444619	87444620	chr15:87444620:G:C	rs1036810	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	87671479	87671480	chr15:87671480:C:T	rs6496435	C	T	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	87844336	87844337	chr15:87844337:C:A	rs892827	C	A	-	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	88029877	88029878	chr15:88029878:G:A	rs890627313	G	A	G	Hoxc9_MA0485.1	4	1	+	9.625350090490702	10.793113804482285	GCCAGTAAATCTC
chr15	88089376	88089377	chr15:88089377:G:A	rs9672679	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr15	88878783	88878784	chr15:88878784:C:T	rs77368996	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	88913387	88913388	chr15:88913388:C:G	rs139643219	C	G	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr15	89004173	89004174	chr15:89004174:C:G	rs140829618	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr15	89031142	89031143	chr15:89031143:G:A	rs74251703	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	89031157	89031158	chr15:89031158:A:G	rs2083457	A	G	G	Hoxc9_MA0485.1	2	1	-	9.245694103222428	10.622712580383652	TGTAATAAATCTT
chr15	89052101	89052102	chr15:89052102:G:A	rs7170575	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	89052115	89052116	chr15:89052116:T:G	rs7177453	T	G	C	Hoxc9_MA0485.1	3	1	-	7.3503706511861875	8.085121858756656	GGGAGTAAATCTG
chr15	89052120	89052121	chr15:89052121:C:A	rs932068	C	A	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	89229691	89229692	chr15:89229692:G:A	rs8032450	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr15	89529113	89529114	chr15:89529114:C:A	rs72748809	C	A	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	89531254	89531255	chr15:89531255:A:C	rs8027943	A	C	A	Hoxc9_MA0485.1	5	1	-	9.831591375609062	2.9330483998894676	TGACATAAATCAG
chr15	89890557	89890558	chr15:89890558:T:C	rs3867167	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	89938072	89938073	chr15:89938073:T:A	rs73482139	T	A	T	Hoxc9_MA0485.1	9	1	+	8.830925348954224	5.0032827804541995	CACAATAAATCTT
chr15	89938094	89938095	chr15:89938095:A:G	rs7403133	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr15	90104792	90104793	chr15:90104793:C:T	rs7496658	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr15	90104813	90104814	chr15:90104814:C:A	rs11632348	C	A	C	Hoxc9_MA0485.1	11	1	+	7.855339122940807	9.908328977839886	TCCCGTAAATCCT
chr15	90451266	90451267	chr15:90451267:T:C	rs2158406	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr15	90592456	90592457	chr15:90592457:C:T	rs118138191	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr15	90592842	90592843	chr15:90592843:A:G	rs142323735	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	90613851	90613852	chr15:90613852:A:G	rs1193402523	A	G	A	Hoxc9_MA0485.1	5	1	-	8.851006566652606	4.36569520401412	ATCCATAAATTAT
chr15	90990585	90990586	chr15:90990586:A:G	rs8025699	A	G	A	Hoxc9_MA0485.1	5	1	-	6.862763673510331	2.3774523108718446	AGCAGTCAATCCC
chr15	91104573	91104574	chr15:91104574:G:A	rs4577064	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr15	91191576	91191577	chr15:91191577:G:T	rs7167305	G	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	91279682	91279683	chr15:91279683:A:C	rs7167433	A	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr15	91385215	91385216	chr15:91385216:A:G	rs7164506	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr15	91484829	91484830	chr15:91484830:C:G	rs12916982	C	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	91484872	91484873	chr15:91484873:G:A	rs12915915	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	91498633	91498634	chr15:91498634:C:T	rs8042384	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	91611769	91611770	chr15:91611770:G:A	rs7172774	G	A	A	Hoxc9_MA0485.1	4	1	+	8.765472577575435	9.93323629156702	ACACGTAAATCAC
chr15	91650948	91650949	chr15:91650949:C:T	rs4130130	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr15	91650971	91650972	chr15:91650972:C:T	rs4130129	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr15	91733443	91733444	chr15:91733444:G:A	rs3935344	G	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr15	91776080	91776081	chr15:91776081:T:G	rs12914693	T	G	-	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr15	91850232	91850233	chr15:91850233:A:G	rs12911651	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr15	91940982	91940983	chr15:91940983:A:C	rs1190015238	A	C	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr15	91940984	91940985	chr15:91940985:C:G	rs74028386	C	G	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr15	91940990	91940991	chr15:91940991:G:A	rs977824230	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	91941032	91941033	chr15:91941033:G:A	rs17643904	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	91941064	91941065	chr15:91941065:A:G	rs74028387	A	G	A	Hoxc9_MA0485.1	2	1	-	9.231974158149898	10.608992635311122	GGTCATAAATTTT
chr15	92003181	92003182	chr15:92003182:A:G	rs12593984	A	G	A	Hoxc9_MA0485.1	9	1	-	9.318851250093477	2.4306254357198447	AGCAATAAATAAT
chr15	92008641	92008642	chr15:92008642:C:G	rs8040010	C	G	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr15	92117773	92117774	chr15:92117774:C:G	rs11074041	C	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr15	92316465	92316466	chr15:92316466:A:T	rs77928289	A	T	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr15	92438865	92438866	chr15:92438866:G:T	rs12441750	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	92627573	92627574	chr15:92627574:T:C	rs28620510	T	C	t	Hoxc9_MA0485.1	7	1	-	7.481243637658038	0.5770145684524587	GACAATCAATCTG
chr15	92687467	92687468	chr15:92687468:C:T	rs144893204	C	T	C	Hoxc9_MA0485.1	0	1	+	8.787349616382285	9.019693273901652	CCCAATAAATCTG
chr15	92715906	92715907	chr15:92715907:G:T	chr15:92715907:G:T	G	T	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr15	92747495	92747496	chr15:92747496:T:C	rs7170645	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr15	92749484	92749485	chr15:92749485:A:T	rs8038406	A	T	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	92819830	92819831	chr15:92819831:C:G	rs192788691	C	G	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr15	93059690	93059691	chr15:93059691:G:A	rs17526323	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr15	93073054	93073055	chr15:93073055:A:G	rs191403910	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr15	93090048	93090049	chr15:93090049:C:T	rs147902727	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	93284168	93284169	chr15:93284169:G:C	rs12595575	G	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr15	93455248	93455249	chr15:93455249:G:A	rs17614355	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr15	93488231	93488232	chr15:93488232:G:A	rs56699134	G	A	G	Hoxc9_MA0485.1	2	1	-	8.932837911815147	7.555819434653925	GGCAATAAATTCC
chr15	93523992	93523993	chr15:93523993:G:A	rs118123660	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr15	93607177	93607178	chr15:93607178:G:C	rs17709338	G	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	93664822	93664823	chr15:93664823:C:T	rs56003959	C	T	C	Hoxc9_MA0485.1	0	1	+	7.348769528621772	7.58111318614114	CCCCATCAATCTG
chr15	93704589	93704590	chr15:93704590:C:T	rs34027089	C	T	C	Hoxc9_MA0485.1	0	1	+	7.691008121993424	7.923351779512793	CGCCATAAAACAG
chr15	94026615	94026616	chr15:94026616:T:G	rs143895795	T	G	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr15	94106141	94106142	chr15:94106142:G:T	rs76485258	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr15	94177221	94177222	chr15:94177222:T:C	rs60117792	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr15	94532335	94532336	chr15:94532336:A:G	rs11633702	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	94611159	94611160	chr15:94611160:G:A	rs12440787	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr15	94676835	94676836	chr15:94676836:G:A	rs74871232	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	94834642	94834643	chr15:94834643:C:G	rs7165511	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr15	94964741	94964742	chr15:94964742:C:G	rs77336521	C	G	C	Hoxc9_MA0485.1	1	1	-	7.906656350857202	6.767695869525528	TGCAATAAAACAC
chr15	95170390	95170391	chr15:95170391:G:A	rs28509387	G	A	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	95296123	95296124	chr15:95296124:A:C	chr15:95296124:A:C	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr15	95464858	95464859	chr15:95464859:T:G	chr15:95464859:T:G	T	G	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr15	95520191	95520192	chr15:95520192:G:A	rs559786150	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	95608684	95608685	chr15:95608685:C:T	rs10520792	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr15	95685325	95685326	chr15:95685326:C:G	rs62020539	C	G	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	95894923	95894924	chr15:95894924:T:C	rs141316063	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr15	96011425	96011426	chr15:96011426:C:A	rs12101514	C	A	C	Hoxc9_MA0485.1	10	1	+	7.3674910323560345	4.6834906984820845	CGGCATCAATCAC
chr15	96038303	96038304	chr15:96038304:G:A	rs62009467	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr15	96171101	96171102	chr15:96171102:C:G	chr15:96171102:C:G	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr15	96286043	96286044	chr15:96286044:C:A	rs146977354	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr15	96322729	96322730	chr15:96322730:G:A	rs147461840	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr15	96330751	96330752	chr15:96330752:C:T	rs139663181	C	T	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr15	96336173	96336174	chr15:96336174:T:A	rs773700315	T	A	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr15	96474461	96474462	chr15:96474462:A:G	rs181010969	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr15	96720322	96720323	chr15:96720323:T:C	rs8031054	T	C	T	Hoxc9_MA0485.1	8	1	-	9.706682110997889	2.8047236008629315	AGCCATCAATCTT
chr15	96791877	96791878	chr15:96791878:T:A	rs73464932	T	A	T	Hoxc9_MA0485.1	8	1	-	7.294969530397774	0.3930110202628139	GGCTATGAATCCT
chr15	97046189	97046190	chr15:97046190:A:G	rs72759278	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr15	97052167	97052168	chr15:97052168:A:G	rs12593202	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr15	97085442	97085443	chr15:97085443:G:T	rs7183650	G	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr15	97234339	97234340	chr15:97234340:G:A	rs11633774	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr15	97352794	97352795	chr15:97352795:C:T	rs34361980	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr15	97712703	97712704	chr15:97712704:T:C	rs74033914	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr15	97712738	97712739	chr15:97712739:G:A	rs5007156	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr15	97712747	97712748	chr15:97712748:A:G	rs4965040	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr15	98221319	98221320	chr15:98221320:T:G	rs61002347	T	G	T	Hoxc9_MA0485.1	8	1	-	8.143953451118414	3.2935512791737542	AACCATGAATCAT
chr15	98319607	98319608	chr15:98319608:C:T	rs12593986	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	98513683	98513684	chr15:98513684:T:A	rs1863275	T	A	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr15	98578891	98578892	chr15:98578892:G:A	rs73469460	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	98586279	98586280	chr15:98586280:G:C	rs1370853568	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr15	98676675	98676676	chr15:98676676:C:T	rs12899774	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr15	99113594	99113595	chr15:99113595:T:C	rs2305445	T	C	C	Hoxc9_MA0485.1	11	1	-	9.448568661700415	5.036035262832045	GGCAGTCAATCAC
chr15	99123719	99123720	chr15:99123720:C:T	rs575845433	C	T	C	Hoxc9_MA0485.1	12	1	+	6.89577650757565	6.641779553811099	CCCCGTGAATCAC
chr15	99249488	99249489	chr15:99249489:T:C	rs185562924	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr15	99249536	99249537	chr15:99249537:G:C	rs8043311	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr15	99386360	99386361	chr15:99386361:G:A	rs371134191	G	A	G	Hoxc9_MA0485.1	6	1	-	8.510797580973422	7.15540441076689	GCCCATCAATCTA
chr15	99386361	99386362	chr15:99386362:A:T	rs62025384	A	T	A	Hoxc9_MA0485.1	5	1	-	8.510797580973422	1.6122546052538282	GCCCATCAATCTA
chr15	99917512	99917513	chr15:99917513:G:T	rs75717794	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr15	99955621	99955622	chr15:99955622:A:C	rs2581347	A	C	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr15	99967041	99967042	chr15:99967042:T:C	rs2727172	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr15	99975503	99975504	chr15:99975504:A:C	rs2573655	A	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr15	100005285	100005286	chr15:100005286:A:T	rs2573665	A	T	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr15	100042766	100042767	chr15:100042767:C:T	rs77700959	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr15	100042768	100042769	chr15:100042769:G:C	rs1480956	G	C	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr15	100043065	100043066	chr15:100043066:A:G	rs73472476	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr15	100253966	100253967	chr15:100253967:T:A	rs7172834	T	A	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	100291486	100291487	chr15:100291487:T:C	chr15:100291487:T:C	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr15	100330374	100330375	chr15:100330375:T:C	rs75296146	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr15	100330780	100330781	chr15:100330781:T:C	rs117279171	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	100334123	100334124	chr15:100334124:T:G	rs78798963	T	G	T	Hoxc9_MA0485.1	5	1	+	8.840509002212139	1.9419660264925431	AGTTGTAAATCAG
chr15	100334149	100334150	chr15:100334150:C:T	rs12593016	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr15	100601259	100601260	chr15:100601260:T:C	rs7167468	T	C	T	Hoxc9_MA0485.1	4	1	-	9.426384192804168	8.258620478812585	GACAATAAATTAC
chr15	100601282	100601283	chr15:100601283:A:G	rs78611605	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr15	100726339	100726340	chr15:100726340:C:T	rs74609871	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr15	100726346	100726347	chr15:100726347:G:A	rs79217209	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr15	100809762	100809763	chr15:100809763:T:C	rs35206288	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr15	100968368	100968369	chr15:100968369:G:T	rs75612594	G	T	G	Hoxc9_MA0485.1	1	1	-	7.995813504762941	7.575330412184554	ACCCATAAATTCC
chr15	101080296	101080297	chr15:101080297:T:G	rs73490964	T	G	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr15	101107162	101107163	chr15:101107163:C:T	rs56257608	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr15	101170780	101170781	chr15:101170781:A:G	rs2168188	A	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr15	101181005	101181006	chr15:101181006:C:T	rs142134640	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr15	101347588	101347589	chr15:101347589:T:C	rs1030	T	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr15	101499228	101499229	chr15:101499229:G:A	rs148484618	G	A	G	Hoxc9_MA0485.1	3	1	-	9.039103515954965	8.150850742932342	GGCCACAAATCAC
chr15	101502705	101502706	chr15:101502706:T:C	rs147650937	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr15	101530688	101530689	chr15:101530689:T:G	rs7177909	T	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr15	101530719	101530720	chr15:101530720:C:T	rs72759812	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr16	320335	320336	chr16:320336:A:G	rs3848362	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	814022	814023	chr16:814023:C:T	rs115091481	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	828222	828223	chr16:828223:C:T	rs2974823	C	T	C	Hoxc9_MA0485.1	2	1	-	7.66421715633986	8.440698325657417	GCGCGTAAATCTC
chr16	832941	832942	chr16:832942:G:A	rs574480919	G	A	G	Hoxc9_MA0485.1	3	1	-	9.441228921319539	8.552976148296915	GGCCGTAAATTTT
chr16	907884	907885	chr16:907885:A:G	rs4984969	A	G	A	Hoxc9_MA0485.1	4	1	+	9.239781106652647	8.072017392661063	AGCAATCAATCAA
chr16	976397	976398	chr16:976398:G:A	rs1978480	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr16	1109816	1109817	chr16:1109817:C:T	rs60522273	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr16	1136296	1136297	chr16:1136297:C:T	rs1983598	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	1457840	1457841	chr16:1457841:C:T	rs8061743	C	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	1457841	1457842	chr16:1457842:G:C	rs8060503	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	2194657	2194658	chr16:2194658:T:C	rs116033919	T	C	T	Hoxc9_MA0485.1	11	1	-	9.639224663281125	5.226691264412756	TGTAATAAATCAG
chr16	2223555	2223556	chr16:2223556:G:A	rs1200799927	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	2782454	2782455	chr16:2782455:A:G	rs2335457	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	3153052	3153053	chr16:3153053:G:A	rs192003505	G	A	g	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr16	3153062	3153063	chr16:3153063:C:T	rs224186	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	3153086	3153087	chr16:3153087:T:C	rs564971533	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	3153088	3153089	chr16:3153089:T:C	rs941622845	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	3191255	3191256	chr16:3191256:G:C	rs74003328	G	C	g	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	3191295	3191296	chr16:3191296:G:T	rs185151945	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	3456371	3456372	chr16:3456372:T:C	rs150218386	T	C	T	Hoxc9_MA0485.1	4	1	-	7.935666531410651	6.767902817419066	CCCAATCAATCAT
chr16	3501391	3501392	chr16:3501392:G:A	rs75113195	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	3536676	3536677	chr16:3536677:T:C	rs74703634	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	3690570	3690571	chr16:3690571:T:C	rs139644916	T	C	T	Hoxc9_MA0485.1	5	1	+	9.434844360418277	4.949532997779788	TGCCATGAATCAC
chr16	3698936	3698937	chr16:3698937:T:C	rs72760804	T	C	T	Hoxc9_MA0485.1	11	1	+	7.985319231886769	6.789918762196711	AGGAATAAATCTG
chr16	4167854	4167855	chr16:4167855:A:G	rs153041	A	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr16	4340244	4340245	chr16:4340245:G:A	rs73507244	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr16	4653176	4653177	chr16:4653177:T:C	rs28592187	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr16	4679904	4679905	chr16:4679905:G:A	rs149095028	G	A	G	Hoxc9_MA0485.1	3	1	-	6.545453040479667	5.657200267457044	GGACGTGAATCTC
chr16	5221441	5221442	chr16:5221442:T:C	rs9930986	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr16	5373309	5373310	chr16:5373310:C:T	rs7203815	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr16	6023122	6023123	chr16:6023123:G:C	rs1165501115	G	C	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr16	6067498	6067499	chr16:6067499:C:T	rs4146811	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	6205571	6205572	chr16:6205572:T:G	rs17139545	T	G	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	6213418	6213419	chr16:6213419:T:A	rs116533883	T	A	t	Hoxc9_MA0485.1	7	1	-	9.373324135503141	4.177472926586566	GGTTGTAAATCAG
chr16	6213445	6213446	chr16:6213446:T:C	rs62016045	T	C	t	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	6547283	6547284	chr16:6547284:G:C	rs8059978	G	C	G	Hoxc9_MA0485.1	12	1	-	9.699700054499543	8.981644275584664	GATTATAAATCAC
chr16	6547419	6547420	chr16:6547420:G:C	rs11077045	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	6682182	6682183	chr16:6682183:G:C	rs78034254	G	C	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr16	6684549	6684550	chr16:6684550:A:G	rs11859830	A	G	A	Hoxc9_MA0485.1	8	1	+	8.12617977264009	1.2242212625051287	AGCTATCAATTAC
chr16	6684571	6684572	chr16:6684572:C:T	rs115422448	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	6685240	6685241	chr16:6685241:C:T	rs4786911	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr16	6728688	6728689	chr16:6728689:T:C	rs12921288	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr16	6732734	6732735	chr16:6732735:G:C	rs17141167	G	C	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr16	6772165	6772166	chr16:6772166:C:G	rs62016077	C	G	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	6772207	6772208	chr16:6772208:A:G	rs62016078	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	6862179	6862180	chr16:6862180:G:C	rs34982008	G	C	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr16	6898523	6898524	chr16:6898524:A:T	rs11642041	A	T	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	6913954	6913955	chr16:6913955:T:C	rs77986938	T	C	T	Hoxc9_MA0485.1	11	1	-	8.126837436174904	3.7143040373065355	GAGTATAAATCAT
chr16	6913968	6913969	chr16:6913969:C:T	rs12927788	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	6913970	6913971	chr16:6913971:C:G	rs12709163	C	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr16	6928193	6928194	chr16:6928194:A:T	rs7185488	A	T	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	6993749	6993750	chr16:6993750:C:A	rs74010434	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	7289065	7289066	chr16:7289066:A:C	rs76204438	A	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	7334225	7334226	chr16:7334226:C:T	rs12448770	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	7442975	7442976	chr16:7442976:C:T	rs1558339	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	7547220	7547221	chr16:7547221:C:T	rs3785253	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	7577991	7577992	chr16:7577992:G:A	rs11077199	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr16	7748492	7748493	chr16:7748493:T:C	rs75556508	T	C	C	Hoxc9_MA0485.1	9	1	+	8.85479242494315	1.9665666105695188	AGCAATAAATAAG
chr16	7926442	7926443	chr16:7926443:G:A	rs60091383	G	A	g	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	7946207	7946208	chr16:7946208:A:T	rs77239773	A	T	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	7979689	7979690	chr16:7979690:G:C	rs17672488	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	8026486	8026487	chr16:8026487:T:A	rs3105679	T	A	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	8033249	8033250	chr16:8033250:A:G	rs58368518	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr16	8188985	8188986	chr16:8188986:G:A	rs17145380	G	A	g	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	8249209	8249210	chr16:8249210:C:T	rs9302865	C	T	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	8361597	8361598	chr16:8361598:C:T	rs58366723	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	8458588	8458589	chr16:8458589:G:T	rs55686778	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	8505412	8505413	chr16:8505413:T:C	rs76260383	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	8512758	8512759	chr16:8512759:T:C	rs75063836	T	C	C	Hoxc9_MA0485.1	11	1	+	7.995446789136053	6.800046319445995	GGCCATAAAACTA
chr16	8655181	8655182	chr16:8655182:T:C	rs117491449	T	C	T	Hoxc9_MA0485.1	5	1	+	10.571751237308323	6.086439874669841	GGTCATAAATCTG
chr16	8678977	8678978	chr16:8678978:G:C	rs150465260	G	C	g	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr16	8682486	8682487	chr16:8682487:G:C	rs12447028	G	C	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	8725398	8725399	chr16:8725399:C:A	rs67350881	C	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	8730802	8730803	chr16:8730803:G:A	rs111861231	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	8812540	8812541	chr16:8812541:C:A	chr16:8812541:C:A	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	8812540	8812541	chr16:8812541:C:G	rs77312021	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	8856392	8856393	chr16:8856393:A:C	rs17566813	A	C	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr16	8856415	8856416	chr16:8856416:T:C	rs2437704	T	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	9072688	9072689	chr16:9072689:T:C	rs78463824	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr16	9073205	9073206	chr16:9073206:G:A	rs138284578	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	9092851	9092852	chr16:9092852:C:G	chr16:9092852:C:G	C	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	9092851	9092852	chr16:9092852:C:T	rs148736862	C	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	9270599	9270600	chr16:9270600:C:G	rs75876181	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr16	9270618	9270619	chr16:9270619:A:G	rs74554475	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr16	9413205	9413206	chr16:9413206:A:G	rs139459190	A	G	a	Hoxc9_MA0485.1	24	0	-	0	0	.
chr16	9659465	9659466	chr16:9659466:G:A	rs72779827	G	A	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	9661623	9661624	chr16:9661624:G:C	rs17568440	G	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	9950793	9950794	chr16:9950794:G:A	rs79193508	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr16	10179678	10179679	chr16:10179679:G:T	rs80099381	G	T	G	Hoxc9_MA0485.1	4	1	+	8.450267687608944	5.949416159283929	ACTCGTAAATCTC
chr16	10196717	10196718	chr16:10196718:A:G	rs1427858	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr16	10197222	10197223	chr16:10197223:C:G	rs11648582	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	10221067	10221068	chr16:10221068:C:G	rs7189534	C	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	10257126	10257127	chr16:10257127:G:T	rs75835903	G	T	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	10261832	10261833	chr16:10261833:C:G	rs194330	C	G	G	Hoxc9_MA0485.1	2	1	+	7.171069308875475	4.475185167154165	GACAGTCAATCAG
chr16	10332270	10332271	chr16:10332271:A:G	rs11649065	A	G	a	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr16	10360590	10360591	chr16:10360591:G:A	rs10444998	G	A	A	Hoxc9_MA0485.1	12	1	+	7.705325806685539	7.579645449852069	GACCATAAATATG
chr16	10521814	10521815	chr16:10521815:G:A	rs77236618	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr16	10722811	10722812	chr16:10722812:T:G	rs1729056	T	G	T	Hoxc9_MA0485.1	4	1	-	7.561132671516133	2.4232059902664727	TCCAATGAATCAC
chr16	10724048	10724049	chr16:10724049:T:G	rs1641785	T	G	t	Hoxc9_MA0485.1	16	0	+	0	0	.
chr16	10741803	10741804	chr16:10741804:G:C	rs1109445	G	C	G	Hoxc9_MA0485.1	12	1	-	8.052072888367556	7.334017109452678	TGCTATTAATCAC
chr16	10835500	10835501	chr16:10835501:A:G	rs10048098	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr16	10870260	10870261	chr16:10870261:G:T	rs6498114	G	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr16	10871587	10871588	chr16:10871588:C:G	chr16:10871588:C:G	C	G	-	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	11047463	11047464	chr16:11047464:T:C	rs16957976	T	C	T	Hoxc9_MA0485.1	4	1	-	7.348769528621772	6.181005814630187	CCCCATCAATCTG
chr16	11129573	11129574	chr16:11129574:C:G	rs146916393	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr16	11129596	11129597	chr16:11129597:C:G	rs11645657	C	G	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	11276740	11276741	chr16:11276741:C:G	rs8060767	C	G	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	11339403	11339404	chr16:11339404:T:C	rs756322942	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	11372653	11372654	chr16:11372654:T:C	rs6498187	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr16	11391038	11391039	chr16:11391039:T:C	rs9928918	T	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr16	11391054	11391055	chr16:11391055:C:A	rs9936640	C	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	11403727	11403728	chr16:11403728:C:A	rs4390614	C	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	11403736	11403737	chr16:11403737:A:G	rs4643338	A	G	G	Hoxc9_MA0485.1	6	1	+	7.235267611646212	4.201061845136791	GGCCACAAATTAC
chr16	11429788	11429789	chr16:11429789:T:A	rs8045454	T	A	A	Hoxc9_MA0485.1	11	1	+	8.751687112465854	9.609276497674877	AGCAATAAATTTA
chr16	11554195	11554196	chr16:11554196:C:A	rs553954017	C	A	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	11689466	11689467	chr16:11689467:A:G	rs2287201	A	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	12205376	12205377	chr16:12205377:C:T	rs1472979	C	T	C	Hoxc9_MA0485.1	12	1	+	7.6677376560163495	7.413740702251799	CCTCATAAATCCC
chr16	12280141	12280142	chr16:12280142:A:G	rs12919169	A	G	A	Hoxc9_MA0485.1	0	1	-	9.56089899318892	9.328555335669552	TGAAATAAATCAT
chr16	12515848	12515849	chr16:12515849:C:G	rs7191558	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	12515872	12515873	chr16:12515873:C:G	rs7191573	C	G	C	Hoxc9_MA0485.1	10	1	+	8.085121858756656	3.284051051009379	GGGCGTAAATCTG
chr16	12562671	12562672	chr16:12562672:T:C	rs12935414	T	C	T	Hoxc9_MA0485.1	8	1	-	8.628112389290198	1.72615387915524	GCCTGTAAATCTA
chr16	12562686	12562687	chr16:12562687:T:C	rs12935425	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	12707174	12707175	chr16:12707175:T:C	rs13337740	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	12799037	12799038	chr16:12799038:G:A	rs11864912	G	A	G	Hoxc9_MA0485.1	4	1	+	8.242922959200683	9.410686673192268	TCACGTAAATCAC
chr16	12799051	12799052	chr16:12799052:G:A	rs557806903	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	12900239	12900240	chr16:12900240:T:C	rs11644362	T	C	T	Hoxc9_MA0485.1	5	1	+	8.056007971842554	3.570696609204068	CCCAATAAATCCT
chr16	13029815	13029816	chr16:13029816:G:A	rs8047829	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	14193030	14193031	chr16:14193031:T:G	rs13332750	T	G	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	14486602	14486603	chr16:14486603:T:A	rs568279311	T	A	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr16	14628309	14628310	chr16:14628310:A:G	chr16:14628310:A:G	A	G	A	Hoxc9_MA0485.1	3	1	+	8.055611226604189	3.2739659621889663	GCCAGTCAATCAT
chr16	14957101	14957102	chr16:14957102:G:A	rs552526455	G	A	.	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	15055148	15055149	chr16:15055149:T:C	rs1008429903	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr16	15093437	15093438	chr16:15093438:T:C	rs62039519	T	C	.	Hoxc9_MA0485.1	7	1	-	8.122966720069009	1.2187376508634324	GCCAATAAATAAA
chr16	15422439	15422440	chr16:15422440:G:A	rs153772	G	A	.	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr16	15519015	15519016	chr16:15519016:T:G	rs529281264	T	G	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	15591141	15591142	chr16:15591142:C:T	rs146980031	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	15672968	15672969	chr16:15672969:G:A	rs16967584	G	A	G	Hoxc9_MA0485.1	1	1	+	9.92669302862957	8.367249454719508	CGCTGTAAATCAT
chr16	15803781	15803782	chr16:15803782:T:A	rs74449435	T	A	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr16	16099745	16099746	chr16:16099746:G:T	rs2283515	G	T	G	Hoxc9_MA0485.1	2	1	-	7.438050836001708	5.518647863597953	GCCTGTCAATCAG
chr16	16778634	16778635	chr16:16778635:C:T	rs62043521	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	16812704	16812705	chr16:16812705:T:G	rs80087794	T	G	.	Hoxc9_MA0485.1	0	1	-	8.85479242494315	8.09989914904903	AGCAATAAATAAG
chr16	16983708	16983709	chr16:16983709:G:A	rs576882660	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	17138950	17138951	chr16:17138951:C:T	chr16:17138951:C:T	C	T	C	Hoxc9_MA0485.1	12	1	-	7.6831797119375045	7.557499355104034	AACCATCAATCTG
chr16	17153310	17153311	chr16:17153311:G:A	rs35457523	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr16	17159782	17159783	chr16:17159783:G:T	rs72775997	G	T	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	17227549	17227550	chr16:17227550:A:G	rs77383255	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr16	17335578	17335579	chr16:17335579:A:G	rs117226146	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr16	17416702	17416703	chr16:17416703:G:A	rs7186552	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr16	17416706	17416707	chr16:17416707:G:A	rs117586441	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	17416746	17416747	chr16:17416747:C:T	rs13334429	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	17619545	17619546	chr16:17619546:G:A	rs7201964	G	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	17823027	17823028	chr16:17823028:C:T	rs6498744	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr16	17830956	17830957	chr16:17830957:A:G	rs4781921	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	18866476	18866477	chr16:18866477:G:A	rs184273704	G	A	-	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	18958832	18958833	chr16:18958833:A:T	rs13339252	A	T	a	Hoxc9_MA0485.1	30	0	-	0	0	.
chr16	18969137	18969138	chr16:18969138:C:G	rs189936908	C	G	c	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	19107728	19107729	chr16:19107729:C:G	rs566434217	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	19192922	19192923	chr16:19192923:T:G	rs71382602	T	G	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	19344424	19344425	chr16:19344425:C:T	rs1467896	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr16	19344438	19344439	chr16:19344439:A:G	rs116222593	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	19708188	19708189	chr16:19708189:C:T	rs768757015	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr16	19833467	19833468	chr16:19833468:C:G	rs1542919	C	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	20067383	20067384	chr16:20067384:T:G	rs2198982	T	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr16	20510473	20510474	chr16:20510474:T:G	rs8061692	T	G	.	Hoxc9_MA0485.1	5	1	+	7.3575756786068585	0.45903270288726433	GGCTGTAAATTCT
chr16	20763889	20763890	chr16:20763890:G:T	rs5709	G	T	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	21514390	21514391	chr16:21514391:T:C	chr16:21514391:T:C	T	C	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	21819580	21819581	chr16:21819581:C:T	rs181314681	C	T	c	Hoxc9_MA0485.1	14	0	-	0	0	.
chr16	22047847	22047848	chr16:22047848:A:G	rs12923227	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr16	22083584	22083585	chr16:22083585:T:A	rs11861611	T	A	T	Hoxc9_MA0485.1	4	1	-	8.933225313847972	5.264610071531377	TGCTATAAATTAA
chr16	22869020	22869021	chr16:22869021:T:C	rs2283531	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	23058724	23058725	chr16:23058725:C:T	rs113752683	C	T	C	Hoxc9_MA0485.1	0	1	-	8.674012706648792	8.14119757335779	GGCCATAACTCAC
chr16	23404394	23404395	chr16:23404395:A:T	rs118164971	A	T	A	Hoxc9_MA0485.1	4	1	+	10.354140993983814	6.685525751667217	AGACATAAATCAG
chr16	23523970	23523971	chr16:23523971:T:C	rs78770424	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr16	23754429	23754430	chr16:23754430:G:A	rs4968030	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr16	23946048	23946049	chr16:23946049:A:T	rs55649386	A	T	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr16	24056992	24056993	chr16:24056993:G:A	rs10852259	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	24057742	24057743	chr16:24057743:T:C	rs12448514	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr16	24069898	24069899	chr16:24069899:C:T	rs16973189	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr16	24072236	24072237	chr16:24072237:T:C	rs7192503	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr16	24539054	24539055	chr16:24539055:G:T	rs147384199	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr16	24539066	24539067	chr16:24539067:G:A	chr16:24539067:G:A	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	24585847	24585848	chr16:24585848:C:T	rs7202130	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	24585848	24585849	chr16:24585849:A:G	rs7201962	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr16	25192138	25192139	chr16:25192139:C:T	rs79692743	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr16	25258857	25258858	chr16:25258858:G:A	rs544636888	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr16	25419390	25419391	chr16:25419391:C:T	rs4787723	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr16	25493303	25493304	chr16:25493304:C:G	rs78616580	C	G	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	25531226	25531227	chr16:25531227:G:A	rs9646266	G	A	.	Hoxc9_MA0485.1	3	1	-	8.745811250215189	7.857558477192566	TGACATAAATTAC
chr16	25840066	25840067	chr16:25840067:T:C	rs4787767	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	25888029	25888030	chr16:25888030:C:T	rs111988583	C	T	T	Hoxc9_MA0485.1	1	1	+	8.902761396500487	7.9589615572556225	TCCCATCAATCAT
chr16	25892766	25892767	chr16:25892767:G:A	rs77736839	G	A	G	Hoxc9_MA0485.1	2	1	+	8.3924540083443	9.168935177661854	GGGAATAAATCTA
chr16	25895586	25895587	chr16:25895587:C:T	rs115740105	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr16	25895588	25895589	chr16:25895589:C:G	rs113046072	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr16	25896096	25896097	chr16:25896097:C:A	rs7203081	C	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr16	26063178	26063179	chr16:26063179:C:T	rs3803712	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr16	26445767	26445768	chr16:26445768:A:T	rs2017588	A	T	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr16	26692822	26692823	chr16:26692823:C:T	rs321440	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr16	26714395	26714396	chr16:26714396:C:T	rs4787385	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	26727944	26727945	chr16:26727945:G:T	rs75345066	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr16	26728034	26728035	chr16:26728035:G:T	rs61102343	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	27164695	27164696	chr16:27164696:A:G	rs4787409	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	27381620	27381621	chr16:27381621:A:G	rs2040788	A	G	G	Hoxc9_MA0485.1	4	1	+	6.982166664637852	5.814402950646269	GCCCATAAAACTG
chr16	27424615	27424616	chr16:27424616:G:A	rs9921638	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr16	27432756	27432757	chr16:27432757:C:T	rs3093317	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr16	27639340	27639341	chr16:27639341:C:T	rs184150482	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr16	27951781	27951782	chr16:27951782:A:T	rs1077719	A	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	28092157	28092158	chr16:28092158:C:T	rs176108	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	28571893	28571894	chr16:28571894:G:A	rs151230	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	28636783	28636784	chr16:28636784:G:T	rs926542177	G	T	.	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	29128317	29128318	chr16:29128318:C:T	rs566400097	C	T	.	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	29128333	29128334	chr16:29128334:A:G	rs1646086	A	G	.	Hoxc9_MA0485.1	12	1	-	8.159064616194389	8.413061569958941	GCACATAAATCCT
chr16	29252580	29252581	chr16:29252581:A:G	rs2370287	A	G	N	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	29304557	29304558	chr16:29304558:G:A	rs7184953	G	A	.	Hoxc9_MA0485.1	3	1	-	7.502845210211371	6.6145924371887475	GTCCGTAAATCCG
chr16	30445876	30445877	chr16:30445877:T:G	rs138343803	T	G	t	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	30922389	30922390	chr16:30922390:G:A	rs569089776	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	30922389	30922390	chr16:30922390:G:T	chr16:30922390:G:T	G	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	30922430	30922431	chr16:30922431:C:A	rs147834303	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr16	31116545	31116546	chr16:31116546:G:T	chr16:31116546:G:T	G	T	g	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	31116561	31116562	chr16:31116562:G:A	rs146524806	G	A	g	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr16	31473276	31473277	chr16:31473277:A:C	rs45612043	A	C	A	Hoxc9_MA0485.1	6	1	+	8.351809728584701	6.178478433253719	GGTCATAAATATT
chr16	31701152	31701153	chr16:31701153:A:G	rs116742914	A	G	a	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	33741716	33741717	chr16:33741717:T:A	chr16:33741717:T:A	T	A	.	Hoxc9_MA0485.1	2	1	-	7.725536029187553	8.267920524430084	CCAAATAAATCAG
chr16	33741716	33741717	chr16:33741717:T:C	rs2698636	T	C	.	Hoxc9_MA0485.1	2	1	-	7.725536029187553	6.949054859869999	CCAAATAAATCAG
chr16	46690256	46690257	chr16:46690257:C:A	rs556641705	C	A	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	47203697	47203698	chr16:47203698:G:A	rs118038478	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr16	48383623	48383624	chr16:48383624:G:C	rs56872747	G	C	g	Hoxc9_MA0485.1	23	0	+	0	0	.
chr16	48438791	48438792	chr16:48438792:C:T	rs79959169	C	T	.	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	48511779	48511780	chr16:48511780:G:A	rs76488587	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr16	48511804	48511805	chr16:48511805:C:A	rs79743877	C	A	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	48538209	48538210	chr16:48538210:A:T	rs9938126	A	T	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	48574054	48574055	chr16:48574055:T:C	rs7188741	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	48895154	48895155	chr16:48895155:G:C	rs77903137	G	C	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	48947435	48947436	chr16:48947436:G:A	rs9937037	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	48947442	48947443	chr16:48947443:A:C	rs140710086	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	49021301	49021302	chr16:49021302:A:G	rs116680592	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr16	49081724	49081725	chr16:49081725:T:C	rs2967249	T	C	C	Hoxc9_MA0485.1	3	1	+	7.744940078814854	8.633192851837478	GCCTATGAATCAG
chr16	49600849	49600850	chr16:49600850:G:A	rs528254355	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr16	49651889	49651890	chr16:49651890:G:A	rs12932545	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr16	49858089	49858090	chr16:49858090:C:A	rs1015856410	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr16	49913926	49913927	chr16:49913927:C:T	rs73578168	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	49970994	49970995	chr16:49970995:A:T	rs4785199	A	T	A	Hoxc9_MA0485.1	1	1	-	8.633998812590534	9.157315559257011	GTATATAAATCAC
chr16	50037318	50037319	chr16:50037319:G:A	rs10852605	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	50702029	50702030	chr16:50702030:C:T	rs8045009	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	50734310	50734311	chr16:50734311:A:G	rs2357792	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr16	50822045	50822046	chr16:50822046:G:A	rs115113210	G	A	g	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	50842952	50842953	chr16:50842953:C:T	rs2160684	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	50939166	50939167	chr16:50939167:C:T	rs9935378	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr16	51218240	51218241	chr16:51218241:G:C	rs8044297	G	C	C	Hoxc9_MA0485.1	1	1	+	10.770845132392875	9.631884651061203	AGTCATAAATCAA
chr16	51255681	51255682	chr16:51255682:T:G	rs7185437	T	G	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	51255775	51255776	chr16:51255776:A:G	rs4416010	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	51305542	51305543	chr16:51305543:G:T	rs62039722	G	T	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr16	51327200	51327201	chr16:51327201:G:C	rs1827982	G	C	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	51341579	51341580	chr16:51341580:C:A	rs28706155	C	A	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	51609724	51609725	chr16:51609725:T:C	rs2648004	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr16	51723330	51723331	chr16:51723331:A:G	rs34869093	A	G	A	Hoxc9_MA0485.1	4	1	+	9.330747580747143	8.16298386675556	ACCCATAAATTAG
chr16	52074418	52074419	chr16:52074419:T:C	rs9635511	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr16	52777081	52777082	chr16:52777082:A:G	rs8047392	A	G	G	Hoxc9_MA0485.1	9	1	+	8.529008596101841	5.468425350228233	GGCCGTAAAACAC
chr16	52918413	52918414	chr16:52918414:T:A	rs12922267	T	A	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr16	53092200	53092201	chr16:53092201:C:G	rs4784292	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	53101119	53101120	chr16:53101120:C:T	rs7199440	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	53285932	53285933	chr16:53285933:A:G	rs8057932	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	53334216	53334217	chr16:53334217:C:A	rs139925696	C	A	-	Hoxc9_MA0485.1	12	1	+	8.410771483380918	7.56703534763257	AGACATAAATTTC
chr16	53363890	53363891	chr16:53363891:C:T	rs56729071	C	T	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr16	53370990	53370991	chr16:53370991:T:A	rs13333142	T	A	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	53434368	53434369	chr16:53434369:G:A	rs957835730	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr16	53598673	53598674	chr16:53598674:T:C	rs16952347	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr16	53764069	53764070	chr16:53764070:G:A	rs772695141	G	A	g	Hoxc9_MA0485.1	0	1	-	8.160791621677967	8.393135279197336	CGAAGTAAATCAT
chr16	53784921	53784922	chr16:53784922:A:G	rs56313538	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr16	53999162	53999163	chr16:53999163:A:G	rs11646488	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	54072058	54072059	chr16:54072059:G:A	rs2540766	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr16	54178359	54178360	chr16:54178360:A:G	rs836995	A	G	A	Hoxc9_MA0485.1	4	1	+	10.588420035644038	9.420656321652455	AACCATAAATCAA
chr16	54328693	54328694	chr16:54328694:T:A	rs4784362	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr16	54334761	54334762	chr16:54334762:G:T	rs11859377	G	T	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	54375355	54375356	chr16:54375356:G:C	rs12596433	G	C	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	54468035	54468036	chr16:54468036:A:C	rs10521311	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	54493525	54493526	chr16:54493526:T:C	rs1362433	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr16	54948839	54948840	chr16:54948840:G:A	rs4238768	G	A	A	Hoxc9_MA0485.1	3	1	-	8.12614636977632	7.237893596753696	CCCCGTAAATTAC
chr16	54953661	54953662	chr16:54953662:A:C	rs8054030	A	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	55002134	55002135	chr16:55002135:T:C	rs4421976	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	55036276	55036277	chr16:55036277:G:A	rs12917636	G	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	55036280	55036281	chr16:55036281:T:C	rs12923220	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	55056904	55056905	chr16:55056905:C:T	rs557200544	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	55056932	55056933	chr16:55056933:C:T	rs566018539	C	T	C	Hoxc9_MA0485.1	0	1	-	8.432376254010725	7.899561120719725	GGCCATGAATTAT
chr16	55056998	55056999	chr16:55056999:G:T	rs11646232	G	T	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr16	55436652	55436653	chr16:55436653:G:C	rs185084263	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	55586895	55586896	chr16:55586896:A:G	rs9944381	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	55663084	55663085	chr16:55663085:C:T	rs72817535	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr16	55734727	55734728	chr16:55734728:T:C	rs4580160	T	C	t	Hoxc9_MA0485.1	8	1	-	7.846562594929794	0.9446040847948329	GTCCGTCAATCAT
chr16	55783618	55783619	chr16:55783619:C:T	rs74019262	C	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	55828988	55828989	chr16:55828989:T:G	rs3826189	T	G	g	Hoxc9_MA0485.1	5	1	+	7.816280176476732	0.9177372007571368	GAGAATAAATCAG
chr16	55855729	55855730	chr16:55855730:G:T	rs539867159	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr16	56075605	56075606	chr16:56075606:G:C	rs77578007	G	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	56106684	56106685	chr16:56106685:C:A	rs1510187	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	56205311	56205312	chr16:56205312:G:C	rs11076143	G	C	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	56269480	56269481	chr16:56269481:G:A	rs111674379	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	56420198	56420199	chr16:56420199:T:G	rs12325384	T	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr16	56562480	56562481	chr16:56562481:C:T	rs11642934	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr16	56562494	56562495	chr16:56562495:T:C	rs1909750	T	C	T	Hoxc9_MA0485.1	4	1	-	8.000612602764868	6.832848888773284	AGCCATAAATACT
chr16	56590119	56590120	chr16:56590120:G:A	rs45561733	G	A	g	Hoxc9_MA0485.1	2	1	-	7.494257824054634	6.11723934689341	GGCCATCAATTCC
chr16	56637954	56637955	chr16:56637955:A:G	rs35346959	A	G	.	Hoxc9_MA0485.1	29	0	-	0	0	.
chr16	56833891	56833892	chr16:56833892:C:T	rs7184439	C	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr16	56912734	56912735	chr16:56912735:C:G	rs711747	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr16	56939136	56939137	chr16:56939137:T:C	rs2270835	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	56960279	56960280	chr16:56960280:C:T	rs12447924	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	56963320	56963321	chr16:56963321:G:A	rs1864163	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	57257754	57257755	chr16:57257755:C:T	rs78843432	C	T	C	Hoxc9_MA0485.1	10	1	+	7.605406472520709	5.8015705682119565	GCCTATGAATCTC
chr16	57356555	57356556	chr16:57356556:C:T	rs79775828	C	T	C	Hoxc9_MA0485.1	2	1	+	9.73774905281653	8.360730575655307	TCCAATAAATCTC
chr16	57356565	57356566	chr16:57356566:C:G	rs669763	C	G	C	Hoxc9_MA0485.1	12	1	+	9.73774905281653	9.019693273901652	TCCAATAAATCTC
chr16	57357478	57357479	chr16:57357479:G:A	rs182668	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	57404259	57404260	chr16:57404260:C:T	rs72792971	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	57606639	57606640	chr16:57606640:A:G	rs12708990	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr16	57618982	57618983	chr16:57618983:G:A	rs74882768	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	57639203	57639204	chr16:57639204:T:G	chr16:57639204:T:G	T	G	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	57639209	57639210	chr16:57639210:C:T	rs7187902	C	T	c	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	57702318	57702319	chr16:57702319:C:T	rs77544473	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	57720408	57720409	chr16:57720409:C:T	rs2923141	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr16	57812565	57812566	chr16:57812566:C:T	rs4784014	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	57812573	57812574	chr16:57812574:G:A	rs78381060	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	57864399	57864400	chr16:57864400:C:T	rs247069	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr16	57892313	57892314	chr16:57892314:A:G	rs78779042	A	G	A	Hoxc9_MA0485.1	8	1	+	8.407448791507491	1.5054902813725308	GTCCATGAATCAC
chr16	57892335	57892336	chr16:57892336:C:T	rs16959474	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	57953032	57953033	chr16:57953033:G:T	rs11858999	G	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	58168179	58168180	chr16:58168180:A:T	rs1875523	A	T	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	58276890	58276891	chr16:58276891:T:C	rs72786134	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	58345548	58345549	chr16:58345549:A:T	rs35325824	A	T	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	59058548	59058549	chr16:59058549:A:G	rs1437185	A	G	A	Hoxc9_MA0485.1	5	1	-	8.633192851837478	4.1478814891989915	GCCCATGAATCAG
chr16	59163707	59163708	chr16:59163708:T:G	rs144312240	T	G	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	59168530	59168531	chr16:59168531:G:A	rs12444458	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	59192945	59192946	chr16:59192946:A:G	rs13335924	A	G	A	Hoxc9_MA0485.1	12	1	+	7.395966208834158	7.521646565667628	TGCTGTCAATCAA
chr16	59545931	59545932	chr16:59545932:T:G	rs72798428	T	G	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	59702110	59702111	chr16:59702111:T:C	rs191794154	T	C	T	Hoxc9_MA0485.1	8	1	-	8.689410279659212	1.7874517695242522	TGCTATCAATCAG
chr16	59749998	59749999	chr16:59749999:G:T	rs13336580	G	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr16	60182149	60182150	chr16:60182150:C:T	rs7195993	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr16	60634769	60634770	chr16:60634770:A:G	rs935757	A	G	G	Hoxc9_MA0485.1	7	1	+	7.912182111588476	1.007953042382897	TGCTTTAAATCAC
chr16	60644428	60644429	chr16:60644429:A:G	rs9929263	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr16	62096384	62096385	chr16:62096385:G:A	rs78775881	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	62225789	62225790	chr16:62225790:C:T	rs116043438	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	62465169	62465170	chr16:62465170:T:G	rs12449171	T	G	T	Hoxc9_MA0485.1	12	1	-	7.815258770182743	8.658994905931092	GGCTATCAATTAA
chr16	62545689	62545690	chr16:62545690:T:C	rs3011236	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	62577014	62577015	chr16:62577015:G:A	rs79921280	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	62604863	62604864	chr16:62604864:G:A	rs73556670	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr16	63060372	63060373	chr16:63060373:G:C	rs2055848	G	C	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr16	63504076	63504077	chr16:63504077:T:G	rs1006303885	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	63937380	63937381	chr16:63937381:A:C	rs8046281	A	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr16	64399091	64399092	chr16:64399092:G:C	rs1012446	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	64437433	64437434	chr16:64437434:T:A	rs62041634	T	A	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr16	64478706	64478707	chr16:64478707:C:T	rs115895830	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	64478744	64478745	chr16:64478745:T:C	rs148666029	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr16	64627472	64627473	chr16:64627473:C:A	rs79308482	C	A	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	64638870	64638871	chr16:64638871:C:A	rs7205719	C	A	C	Hoxc9_MA0485.1	4	1	-	7.540260434766821	5.039408906441808	GGCAGTAAAACAT
chr16	64820277	64820278	chr16:64820278:A:G	rs62044495	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr16	64907876	64907877	chr16:64907877:T:C	rs78911631	T	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr16	64907983	64907984	chr16:64907984:G:A	rs17498325	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	64983773	64983774	chr16:64983774:T:C	rs974602387	T	C	T	Hoxc9_MA0485.1	4	1	-	7.95561190515618	6.787848191164597	GCCTATAAATATC
chr16	64983788	64983789	chr16:64983789:A:G	rs35207	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr16	65090476	65090477	chr16:65090477:G:T	rs6416689	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr16	65309651	65309652	chr16:65309652:C:T	rs77767054	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	65489538	65489539	chr16:65489539:G:A	rs12932274	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	65489582	65489583	chr16:65489583:A:G	rs8063546	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	65755593	65755594	chr16:65755594:G:T	rs73582480	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	65761214	65761215	chr16:65761215:C:T	rs74781123	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	65767484	65767485	chr16:65767485:A:G	rs12922945	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr16	65860885	65860886	chr16:65860886:T:C	rs11866366	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr16	66007897	66007898	chr16:66007898:G:A	rs1108481	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr16	66017014	66017015	chr16:66017015:G:A	rs17765854	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr16	66186496	66186497	chr16:66186497:G:C	rs235106	G	C	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	66205649	66205650	chr16:66205650:A:C	rs188360932	A	C	A	Hoxc9_MA0485.1	0	1	+	10.151313743013402	9.396420467119283	ACCCATAAATCTA
chr16	66212784	66212785	chr16:66212785:G:C	rs235088	G	C	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	66337717	66337718	chr16:66337718:C:T	rs895622504	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr16	66337748	66337749	chr16:66337749:G:A	rs146494819	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	66368515	66368516	chr16:66368516:A:G	rs755199075	A	G	A	Hoxc9_MA0485.1	12	1	-	7.8008821034664235	8.054879057230975	AGCAGTGAATCAT
chr16	66370292	66370293	chr16:66370293:A:G	rs11646157	A	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr16	66378220	66378221	chr16:66378221:A:G	rs13330048	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	66822993	66822994	chr16:66822994:C:T	rs409033	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	66832897	66832898	chr16:66832898:A:G	rs577290442	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr16	67356638	67356639	chr16:67356639:T:A	rs78540639	T	A	T	Hoxc9_MA0485.1	6	1	-	10.622712580383652	7.093988114846136	TGCAATAAATCTT
chr16	68328273	68328274	chr16:68328274:C:T	rs114410042	C	T	C	Hoxc9_MA0485.1	3	1	+	7.43485603036242	6.546603257339797	TACCGTAAATCCT
chr16	68342666	68342667	chr16:68342667:A:G	rs6499172	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	68687566	68687567	chr16:68687567:T:C	rs2296405	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	68993585	68993586	chr16:68993586:T:C	rs76505021	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	69189073	69189074	chr16:69189074:G:A	rs111841318	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr16	69315875	69315876	chr16:69315876:A:T	rs35815622	A	T	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr16	69315881	69315882	chr16:69315882:T:C	rs11644691	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr16	69410496	69410497	chr16:69410497:T:C	rs149518849	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	69450626	69450627	chr16:69450627:G:C	rs6499225	G	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	69451209	69451210	chr16:69451210:G:A	rs76196490	G	A	g	Hoxc9_MA0485.1	4	1	+	8.792915350770858	9.960679064762441	AGCCGTCAATCTC
chr16	69480740	69480741	chr16:69480741:G:A	rs35463268	G	A	g	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr16	69888308	69888309	chr16:69888309:G:A	chr16:69888309:G:A	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr16	69916626	69916627	chr16:69916627:T:C	rs117016888	T	C	T	Hoxc9_MA0485.1	8	1	-	9.153469104809538	2.251510594674578	TGCTATCAATCAT
chr16	69916637	69916638	chr16:69916638:G:A	rs115291707	G	A	g	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	69935459	69935460	chr16:69935460:C:A	rs79173709	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	70103318	70103319	chr16:70103319:A:G	rs4286101	A	G	.	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	70591300	70591301	chr16:70591301:G:A	rs55638004	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr16	70642159	70642160	chr16:70642160:G:A	rs114253017	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr16	70652679	70652680	chr16:70652680:G:C	rs190344038	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr16	70752065	70752066	chr16:70752066:C:G	rs16970484	C	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	71344802	71344803	chr16:71344803:G:A	rs75371468	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	71349985	71349986	chr16:71349986:C:G	rs11646719	C	G	G	Hoxc9_MA0485.1	0	1	+	8.10095629393271	9.388664703117831	CTCCATAAATCCC
chr16	71758286	71758287	chr16:71758287:G:A	rs11866559	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr16	71758304	71758305	chr16:71758305:T:C	rs7185997	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	71771838	71771839	chr16:71771839:T:C	rs111941124	T	C	T	Hoxc9_MA0485.1	5	1	+	9.8794718329477	5.394160470309217	TGCTATAAATCTA
chr16	71794712	71794713	chr16:71794713:C:T	rs77823468	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr16	72042522	72042523	chr16:72042523:C:G	rs77980365	C	G	C	Hoxc9_MA0485.1	10	1	+	7.569021522539136	2.767950714791858	CCCCATTAATCAC
chr16	72074193	72074194	chr16:72074194:G:A	rs2000999	G	A	G	Hoxc9_MA0485.1	3	1	-	7.435130744318015	6.546877971295391	GCACATCAATCTC
chr16	72221367	72221368	chr16:72221368:C:T	rs55794954	C	T	C	Hoxc9_MA0485.1	3	1	+	11.008435920100553	10.12018314707793	GCTCATAAATCAC
chr16	72313489	72313490	chr16:72313490:A:G	rs17669981	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	72471692	72471693	chr16:72471693:G:T	chr16:72471693:G:T	G	T	G	Hoxc9_MA0485.1	0	1	+	7.307114607183993	6.251749855518239	GGCTACAAATCAA
chr16	72665665	72665666	chr16:72665666:C:T	rs16971138	C	T	C	Hoxc9_MA0485.1	1	1	+	10.809809233137875	9.86600939389301	GCCCATAAATCTG
chr16	73016676	73016677	chr16:73016677:C:G	rs11860416	C	G	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	73021485	73021486	chr16:73021486:T:C	rs76504882	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr16	73054814	73054815	chr16:73054815:T:C	rs763224126	T	C	T	Hoxc9_MA0485.1	11	1	+	8.207629296711811	7.0122288270217545	GACTGTAAATCTA
chr16	73056630	73056631	chr16:73056631:G:C	rs549570463	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	73092850	73092851	chr16:73092851:G:A	rs72795164	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	73285906	73285907	chr16:73285907:A:C	rs56091557	A	C	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	73299543	73299544	chr16:73299544:A:G	rs74030043	A	G	A	Hoxc9_MA0485.1	4	1	+	8.317464385008375	7.149700671016792	CGATATAAATCTT
chr16	73671151	73671152	chr16:73671152:C:T	rs8048857	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	73878688	73878689	chr16:73878689:G:C	rs1104608	G	C	C	Hoxc9_MA0485.1	12	1	-	8.575143294535653	7.857087515620775	GGTTATAAATAAC
chr16	73878701	73878702	chr16:73878702:T:G	rs77311328	T	G	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	74025171	74025172	chr16:74025172:G:C	rs2716587	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr16	74029380	74029381	chr16:74029381:G:T	rs4888108	G	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	74030260	74030261	chr16:74030261:G:A	rs71389001	G	A	G	Hoxc9_MA0485.1	12	1	-	10.062456383121337	9.808459429356784	GACAGTAAATCAC
chr16	74226923	74226924	chr16:74226924:G:C	rs4889485	G	C	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr16	74268584	74268585	chr16:74268585:T:C	rs534962130	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	74451630	74451631	chr16:74451631:T:C	rs3851729	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	74533489	74533490	chr16:74533490:C:T	rs1971071	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	74562284	74562285	chr16:74562285:T:A	rs8052389	T	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr16	74562290	74562291	chr16:74562291:G:A	rs8046158	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	74634822	74634823	chr16:74634823:A:G	rs8060923	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	74679155	74679156	chr16:74679156:A:G	rs6564159	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	74702048	74702049	chr16:74702049:G:A	rs4392103	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr16	74752003	74752004	chr16:74752004:A:G	rs7185697	A	G	A	Hoxc9_MA0485.1	12	1	+	9.542553670602809	9.668234027436279	TTCCATAAATCAA
chr16	74769601	74769602	chr16:74769602:A:C	rs74355523	A	C	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr16	74858221	74858222	chr16:74858222:C:T	rs62052946	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	75003766	75003767	chr16:75003767:C:T	rs148342731	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	75381932	75381933	chr16:75381933:A:G	rs4146810	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	75394297	75394298	chr16:75394298:T:G	rs4888405	T	G	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	75403239	75403240	chr16:75403240:A:G	rs467780	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	75441793	75441794	chr16:75441794:A:G	rs7184596	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	75441805	75441806	chr16:75441806:C:T	rs7206780	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr16	75617806	75617807	chr16:75617807:C:G	rs75271927	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	76112611	76112612	chr16:76112612:C:T	rs368277570	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr16	76126178	76126179	chr16:76126179:A:T	rs12149693	A	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	76126206	76126207	chr16:76126207:T:C	rs12930903	T	C	T	Hoxc9_MA0485.1	4	1	-	8.708328413889289	7.540564699897707	GACAATAAATTAG
chr16	76377578	76377579	chr16:76377579:T:C	rs17766975	T	C	T	Hoxc9_MA0485.1	0	1	-	8.02499669547075	8.557811828761752	ACCCATAAAACAC
chr16	76421918	76421919	chr16:76421919:T:G	rs190991091	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	76478195	76478196	chr16:76478196:G:T	rs8059865	G	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr16	76615007	76615008	chr16:76615008:C:T	chr16:76615008:C:T	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr16	76654313	76654314	chr16:76654314:C:T	rs73629988	C	T	C	Hoxc9_MA0485.1	12	1	-	8.577011317333382	8.451330960499911	GGCTGTCAATCAG
chr16	76709411	76709412	chr16:76709412:G:A	rs9921190	G	A	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	76818991	76818992	chr16:76818992:G:A	rs79417335	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	77043346	77043347	chr16:77043347:C:A	rs149510796	C	A	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr16	77110102	77110103	chr16:77110103:C:G	rs12600266	C	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	77214063	77214064	chr16:77214064:G:A	rs12051196	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	77225352	77225353	chr16:77225353:T:C	rs67076559	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	77238978	77238979	chr16:77238979:C:T	rs74551760	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	77403023	77403024	chr16:77403024:A:G	rs4888626	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	77497151	77497152	chr16:77497152:T:C	rs62046532	T	C	T	Hoxc9_MA0485.1	10	1	-	8.896797020031123	6.779726546157794	TGCTATAAATAAC
chr16	77510507	77510508	chr16:77510508:G:A	rs16945803	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr16	77549106	77549107	chr16:77549107:C:T	rs11642459	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	77638083	77638084	chr16:77638084:C:G	rs41377447	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	77652477	77652478	chr16:77652478:A:G	rs16946235	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	77679244	77679245	chr16:77679245:G:A	rs8062748	G	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	77748156	77748157	chr16:77748157:C:G	rs78599153	C	G	G	Hoxc9_MA0485.1	4	1	-	8.04051731806868	4.070354350810606	TACCGTAAATCTA
chr16	77805331	77805332	chr16:77805332:A:G	rs2966063	A	G	A	Hoxc9_MA0485.1	12	1	-	9.716944397898565	9.970941351663118	GGGCATAAATCTT
chr16	77834816	77834817	chr16:77834817:C:T	rs78651476	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr16	77856787	77856788	chr16:77856788:A:C	rs1080941	A	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	77939441	77939442	chr16:77939442:A:C	rs7184775	A	C	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr16	77939454	77939455	chr16:77939455:C:T	rs4243140	C	T	T	Hoxc9_MA0485.1	3	1	+	7.265682985374334	6.377430212351709	TGCCACAAATCAG
chr16	77939458	77939459	chr16:77939459:A:G	rs4362400	A	G	A	Hoxc9_MA0485.1	7	1	+	7.265682985374334	0.361453916168755	TGCCACAAATCAG
chr16	78001531	78001532	chr16:78001532:T:C	rs425136	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	78052463	78052464	chr16:78052464:C:G	rs8045479	C	G	a	Hoxc9_MA0485.1	10	1	+	8.520751020171662	3.719680212424385	CACAGTAAATCAT
chr16	78057952	78057953	chr16:78057953:C:A	rs115080776	C	A	c	Hoxc9_MA0485.1	1	1	-	11.217428069929815	9.134667749353278	GGCCATAAATCCT
chr16	78060110	78060111	chr16:78060111:A:T	rs11864652	A	T	t	Hoxc9_MA0485.1	1	1	+	7.268483125154288	6.745166378487808	GACCGTTAATCAC
chr16	78060131	78060132	chr16:78060132:C:G	rs11641285	C	G	c	Hoxc9_MA0485.1	22	0	+	0	0	.
chr16	78148138	78148139	chr16:78148139:C:G	rs147654166	C	G	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	78154461	78154462	chr16:78154462:A:G	rs8058162	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	78237168	78237169	chr16:78237169:C:T	rs8063113	C	T	C	Hoxc9_MA0485.1	12	1	-	9.747995645943144	9.622315289109673	GCACATAAATCAG
chr16	78237199	78237200	chr16:78237200:G:A	rs11639501	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr16	78242565	78242566	chr16:78242566:G:A	rs574486818	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr16	78246547	78246548	chr16:78246548:T:C	rs4888769	T	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr16	78288760	78288761	chr16:78288761:A:G	rs11643583	A	G	G	Hoxc9_MA0485.1	12	1	-	9.439368766165849	9.693365719930402	GCCTATAAATTAT
chr16	78311365	78311366	chr16:78311366:T:C	rs150244354	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	78311376	78311377	chr16:78311377:C:T	rs77681430	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	78364370	78364371	chr16:78364371:C:G	rs4077864	C	G	C	Hoxc9_MA0485.1	12	1	-	8.611829094370341	9.32988487328522	GTTAATAAATCAG
chr16	78381241	78381242	chr16:78381242:C:T	rs11150071	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr16	78386744	78386745	chr16:78386745:G:A	rs35121047	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	78491247	78491248	chr16:78491248:G:C	rs2667582	G	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	78625045	78625046	chr16:78625046:C:G	rs8056131	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	78683774	78683775	chr16:78683775:G:T	rs9935613	G	T	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr16	78689722	78689723	chr16:78689723:C:T	rs8055602	C	T	C	Hoxc9_MA0485.1	12	1	+	10.219129146451742	9.96513219268719	GACTATAAATCTC
chr16	78803132	78803133	chr16:78803133:T:G	rs9931801	T	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	78844612	78844613	chr16:78844613:A:G	rs1543296	A	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr16	78867871	78867872	chr16:78867872:G:A	rs6564613	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr16	78951142	78951143	chr16:78951143:T:C	rs8063186	T	C	T	Hoxc9_MA0485.1	4	1	-	7.4243820394612445	6.25661832546966	GCCAATCAATCCC
chr16	79001606	79001607	chr16:79001607:A:G	rs62038698	A	G	A	Hoxc9_MA0485.1	4	1	+	11.734298919357228	10.566535205365645	TGCAATAAATCAC
chr16	79062459	79062460	chr16:79062460:G:C	chr16:79062460:G:C	G	C	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr16	79079371	79079372	chr16:79079372:G:A	rs6564642	G	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr16	79080477	79080478	chr16:79080478:A:C	rs6564643	A	C	A	Hoxc9_MA0485.1	7	1	+	7.265682985374334	0.361453916168755	TGCCACAAATCAG
chr16	79125642	79125643	chr16:79125643:G:A	rs7191918	G	A	G	Hoxc9_MA0485.1	1	1	+	6.972687185691421	5.413243611781359	GGCCATAACTCTA
chr16	79259555	79259556	chr16:79259556:A:G	rs76131367	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	79261795	79261796	chr16:79261796:C:G	chr16:79261796:C:G	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr16	79307183	79307184	chr16:79307184:A:C	rs17797375	A	C	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	79318595	79318596	chr16:79318596:T:C	rs16950223	T	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	79405115	79405116	chr16:79405116:A:G	rs34642219	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr16	79405137	79405138	chr16:79405138:G:A	rs17711743	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr16	79595671	79595672	chr16:79595672:A:G	rs3826106	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	79595717	79595718	chr16:79595718:A:G	rs115518916	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	79606200	79606201	chr16:79606201:T:C	rs77014047	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	79672823	79672824	chr16:79672824:C:G	rs114503656	C	G	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr16	79672853	79672854	chr16:79672854:T:C	rs1424231	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr16	79789201	79789202	chr16:79789202:G:A	rs12923698	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr16	80159023	80159024	chr16:80159024:A:C	rs12598278	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	80285315	80285316	chr16:80285316:T:C	rs2348640	T	C	T	Hoxc9_MA0485.1	9	1	-	8.90996022303787	5.8493769771642645	AGCCATAAAACAT
chr16	80309327	80309328	chr16:80309328:T:C	rs8057498	T	C	t	Hoxc9_MA0485.1	4	1	-	9.853668828073568	8.685905114081985	AACAATAAATCAA
chr16	80427332	80427333	chr16:80427333:C:T	rs62050423	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	80442106	80442107	chr16:80442107:T:C	rs11642153	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	80586054	80586055	chr16:80586055:A:G	rs11866190	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr16	80663251	80663252	chr16:80663252:G:C	rs2123284	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr16	80663290	80663291	chr16:80663291:G:A	rs7195009	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	80718552	80718553	chr16:80718553:T:A	chr16:80718553:T:A	T	A	T	Hoxc9_MA0485.1	11	1	-	10.371029044825516	9.513439659616493	AGCAGTAAATCAG
chr16	80718978	80718979	chr16:80718979:G:A	rs183710355	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr16	80821742	80821743	chr16:80821743:T:C	rs2580317	T	C	C	Hoxc9_MA0485.1	9	1	+	7.7986765284854	0.9104507141117666	GGCAATAAATACT
chr16	81008223	81008224	chr16:81008224:T:C	rs111829199	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr16	81073357	81073358	chr16:81073358:C:G	rs804905	C	G	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	81223553	81223554	chr16:81223554:A:G	rs7186421	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr16	81223555	81223556	chr16:81223556:A:G	rs7186423	A	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr16	81223592	81223593	chr16:81223593:G:C	rs62052458	G	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	81448298	81448299	chr16:81448299:A:G	rs62043926	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	81505236	81505237	chr16:81505237:G:A	rs12920728	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr16	81559838	81559839	chr16:81559839:A:G	rs62046637	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	81568893	81568894	chr16:81568894:G:A	rs11649004	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr16	81574227	81574228	chr16:81574228:T:C	rs4483835	T	C	t	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	81936801	81936802	chr16:81936802:C:T	rs3934956	C	T	T	Hoxc9_MA0485.1	12	1	+	8.634205503874714	8.380208550110162	TCGCATAAATCAC
chr16	82012284	82012285	chr16:82012285:G:C	rs41526051	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	82147372	82147373	chr16:82147373:G:C	rs4889475	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr16	82147396	82147397	chr16:82147397:T:A	rs4888207	T	A	A	Hoxc9_MA0485.1	11	1	+	7.147698906722271	8.005288291931292	GGCCATAAATGTG
chr16	82152777	82152778	chr16:82152778:G:C	rs4889476	G	C	G	Hoxc9_MA0485.1	4	1	+	7.900481600044375	3.930318632786303	GACCGTAAATCCA
chr16	82181689	82181690	chr16:82181690:T:G	rs184022284	T	G	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	82333530	82333531	chr16:82333531:T:A	rs9937707	T	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr16	82333549	82333550	chr16:82333550:G:A	rs9926445	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	82432513	82432514	chr16:82432514:C:T	rs62039979	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr16	82534076	82534077	chr16:82534077:A:G	rs956746	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	82534079	82534080	chr16:82534080:A:G	rs766292	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	82574753	82574754	chr16:82574754:C:A	rs16957743	C	A	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	82629682	82629683	chr16:82629683:G:T	rs12051272	G	T	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	82652407	82652408	chr16:82652408:C:G	rs974885565	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	82683394	82683395	chr16:82683395:C:A	rs17264872	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr16	82735892	82735893	chr16:82735893:T:C	rs7194615	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr16	82878576	82878577	chr16:82878577:T:C	rs9933586	T	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	83054495	83054496	chr16:83054496:C:T	rs77427913	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr16	83108875	83108876	chr16:83108876:C:A	rs77489205	C	A	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	83108880	83108881	chr16:83108881:G:A	rs72798356	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	83121688	83121689	chr16:83121689:A:G	rs34385540	A	G	A	Hoxc9_MA0485.1	11	1	+	8.578477784128255	4.165944385259888	CCTTATAAATCAT
chr16	83156739	83156740	chr16:83156740:C:T	rs149214014	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr16	83156767	83156768	chr16:83156768:C:G	rs55710383	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr16	83248438	83248439	chr16:83248439:T:C	rs12148954	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr16	83308628	83308629	chr16:83308629:G:A	rs723919	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	83344310	83344311	chr16:83344311:C:A	rs1895534	C	A	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr16	83344311	83344312	chr16:83344312:C:T	rs565344580	C	T	c	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr16	83578575	83578576	chr16:83578576:A:T	rs7197896	A	T	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	83587028	83587029	chr16:83587029:C:A	rs3934664	C	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr16	83593009	83593010	chr16:83593010:G:A	rs12598036	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr16	83689391	83689392	chr16:83689392:G:C	rs12448601	G	C	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr16	83726996	83726997	chr16:83726997:A:G	rs7198617	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	83750604	83750605	chr16:83750605:C:A	rs411454	C	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	83799520	83799521	chr16:83799521:G:T	rs17780828	G	T	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr16	83806959	83806960	chr16:83806960:G:T	rs4782557	G	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	84044563	84044564	chr16:84044564:G:T	rs34441238	G	T	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr16	84141436	84141437	chr16:84141437:T:G	rs142433452	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr16	84235004	84235005	chr16:84235005:A:G	rs1862835	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	84235053	84235054	chr16:84235054:G:A	rs36014715	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr16	84288939	84288940	chr16:84288940:G:A	rs11645140	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr16	84296555	84296556	chr16:84296556:T:C	rs1862806	T	C	T	Hoxc9_MA0485.1	4	1	-	8.364674982130156	7.196911268138574	GGTCATTAATCAT
chr16	84307408	84307409	chr16:84307409:A:T	rs12447081	A	T	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	84396253	84396254	chr16:84396254:A:T	rs8057866	A	T	A	Hoxc9_MA0485.1	5	1	-	7.880246436667939	0.9817034609483424	ACACATAAATCCC
chr16	84454215	84454216	chr16:84454216:G:A	rs171577	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr16	84497408	84497409	chr16:84497409:A:C	rs62050764	A	C	A	Hoxc9_MA0485.1	7	1	+	6.990625881471439	0.08639681226586088	AGCCATCAAACAC
chr16	84586075	84586076	chr16:84586076:A:G	rs2914833	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr16	84622895	84622896	chr16:84622896:T:C	rs35951824	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr16	84671062	84671063	chr16:84671063:C:T	rs16974398	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr16	84767606	84767607	chr16:84767607:T:G	chr16:84767607:T:G	T	G	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	84838242	84838243	chr16:84838243:G:A	rs76308337	G	A	G	Hoxc9_MA0485.1	4	1	+	6.552412416315722	7.720176130307307	TGGCGTAAATCCC
chr16	84937816	84937817	chr16:84937817:G:A	rs2934467	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr16	84968405	84968406	chr16:84968406:G:A	rs1566461	G	A	A	Hoxc9_MA0485.1	0	1	+	8.179812740389659	7.646997607098658	GGCAATGAATCTG
chr16	85004458	85004459	chr16:85004459:G:A	rs7499539	G	A	A	Hoxc9_MA0485.1	4	1	+	9.18637727999223	10.354140993983814	AGACGTAAATCAG
chr16	85127542	85127543	chr16:85127543:T:C	rs16975265	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	85162546	85162547	chr16:85162547:C:T	rs559585720	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	85162547	85162548	chr16:85162548:G:A	rs999342773	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	85168937	85168938	chr16:85168938:T:C	rs571487344	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr16	85200621	85200622	chr16:85200622:G:A	rs115786682	G	A	G	Hoxc9_MA0485.1	0	1	+	8.1960143306035	7.663199197312497	GACAATGAATCAC
chr16	85352261	85352262	chr16:85352262:C:T	rs55794714	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr16	85413378	85413379	chr16:85413379:T:A	rs12934659	T	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr16	85449577	85449578	chr16:85449578:C:T	chr16:85449578:C:T	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr16	85461219	85461220	chr16:85461220:G:A	rs141009290	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	85490250	85490251	chr16:85490251:T:C	rs8053797	T	C	T	Hoxc9_MA0485.1	5	1	+	8.654300897580185	4.1689895349417005	TTCTATAAATCAA
chr16	85507254	85507255	chr16:85507255:C:T	rs12596016	C	T	C	Hoxc9_MA0485.1	11	1	+	8.955446065201471	10.15084653489153	GCTCATAAATCCC
chr16	85602278	85602279	chr16:85602279:G:C	rs77529638	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr16	85611370	85611371	chr16:85611371:G:C	rs1244235497	G	C	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr16	85898744	85898745	chr16:85898745:C:T	rs188602	C	T	.	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	85909859	85909860	chr16:85909860:T:C	rs305077	T	C	C	Hoxc9_MA0485.1	4	1	-	9.235015389519921	8.067251675528336	TCTCATAAATCAG
chr16	86111762	86111763	chr16:86111763:T:C	rs11643956	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr16	86118386	86118387	chr16:86118387:A:C	rs1497729	A	C	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	86121059	86121060	chr16:86121060:G:C	rs17819804	G	C	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr16	86198682	86198683	chr16:86198683:C:G	rs35570289	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr16	86249606	86249607	chr16:86249607:G:C	rs13330764	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr16	86363470	86363471	chr16:86363471:G:T	rs183279638	G	T	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr16	86399013	86399014	chr16:86399014:G:A	rs117677314	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr16	86518464	86518465	chr16:86518465:C:T	rs534227858	C	T	c	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	86521976	86521977	chr16:86521977:T:C	rs6539951	T	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr16	86529358	86529359	chr16:86529359:G:A	rs186242267	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr16	86554170	86554171	chr16:86554171:G:A	rs2081232	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr16	86554173	86554174	chr16:86554174:C:G	rs181173527	C	G	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr16	86594866	86594867	chr16:86594867:C:T	rs8045203	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr16	86626446	86626447	chr16:86626447:A:G	rs300017	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr16	86680360	86680361	chr16:86680361:A:G	rs144741154	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr16	86720302	86720303	chr16:86720303:G:A	rs113052577	G	A	G	Hoxc9_MA0485.1	11	1	-	7.432711919600141	8.628112389290198	GCCTGTAAATCCA
chr16	86741567	86741568	chr16:86741568:A:G	rs78496295	A	G	A	Hoxc9_MA0485.1	5	1	-	10.770845132392875	6.28553376975439	AGTCATAAATCAA
chr16	86769176	86769177	chr16:86769177:G:A	rs75241109	G	A	G	Hoxc9_MA0485.1	10	1	-	8.66175657464486	6.857920670336109	AGCAGTCAATCAT
chr16	86869032	86869033	chr16:86869033:T:G	rs4843475	T	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr16	86869043	86869044	chr16:86869044:A:G	rs4843476	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	86878548	86878549	chr16:86878549:A:G	rs11640938	A	G	a	Hoxc9_MA0485.1	19	0	-	0	0	.
chr16	86953886	86953887	chr16:86953887:C:G	rs4843197	C	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	86993452	86993453	chr16:86993453:A:G	rs12925527	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr16	87067139	87067140	chr16:87067140:G:T	rs4081747	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr16	87149318	87149319	chr16:87149319:C:T	chr16:87149319:C:T	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr16	87150759	87150760	chr16:87150760:G:A	rs11865182	G	A	G	Hoxc9_MA0485.1	3	1	-	7.265682985374334	6.377430212351709	TGCCACAAATCAG
chr16	87278782	87278783	chr16:87278783:A:G	chr16:87278783:A:G	A	G	A	Hoxc9_MA0485.1	8	1	+	5.918133285304939	-0.9838252248300198	GGCCATAAACCAG
chr16	87278795	87278796	chr16:87278796:A:G	rs145351993	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr16	87388676	87388677	chr16:87388677:A:C	chr16:87388677:A:C	A	C	A	Hoxc9_MA0485.1	5	1	-	11.21440143781469	4.315858462095098	GGCTGTAAATCAT
chr16	87410127	87410128	chr16:87410128:C:T	rs1050847	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr16	87427903	87427904	chr16:87427904:T:A	rs1224513114	T	A	T	Hoxc9_MA0485.1	8	1	-	8.276448055348489	1.3744895452135295	GCCTGTAAATCCC
chr16	87457060	87457061	chr16:87457061:G:A	rs74853919	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr16	87715658	87715659	chr16:87715659:G:T	rs73241924	G	T	G	Hoxc9_MA0485.1	1	1	+	7.97094090813563	5.888180587559092	GGTTATGAATCAT
chr16	87765125	87765126	chr16:87765126:G:C	rs4843266	G	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr16	87812280	87812281	chr16:87812281:C:T	rs28602621	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr16	87840533	87840534	chr16:87840534:G:A	rs11865049	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr16	87863529	87863530	chr16:87863530:T:C	rs144117488	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr16	87965744	87965745	chr16:87965745:A:G	rs4843283	A	G	g	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr16	87967401	87967402	chr16:87967402:T:C	rs12599962	T	C	t	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr16	87976996	87976997	chr16:87976997:G:A	rs4843759	G	A	a	Hoxc9_MA0485.1	4	1	+	8.33764168130558	9.505405395297164	CCCAGTAAATCTC
chr16	88255939	88255940	chr16:88255940:A:C	rs61235349	A	C	-	Hoxc9_MA0485.1	21	0	-	0	0	.
chr16	88488498	88488499	chr16:88488499:T:C	rs17782553	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr16	88552880	88552881	chr16:88552881:C:A	rs10163412	C	A	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr16	88740815	88740816	chr16:88740816:T:C	rs753602	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr16	88760929	88760930	chr16:88760930:G:A	rs112028717	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr16	88917583	88917584	chr16:88917584:T:C	rs80043174	T	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr16	88965315	88965316	chr16:88965316:G:C	rs114522364	G	C	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr16	89012904	89012905	chr16:89012905:A:G	rs11076749	A	G	G	Hoxc9_MA0485.1	2	1	+	8.451626072421762	7.675144903104207	AGAAGTAAATCAG
chr16	89061552	89061553	chr16:89061553:C:T	rs34473463	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr16	89144824	89144825	chr16:89144825:G:A	rs75042359	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	89404837	89404838	chr16:89404838:A:C	rs2086824	A	C	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr16	89434621	89434622	chr16:89434622:T:G	rs2965819	T	G	T	Hoxc9_MA0485.1	9	1	+	7.64037586503132	0.7521500506576886	GCCTATAAATTCC
chr16	89483153	89483154	chr16:89483154:T:C	rs8043788	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	89490710	89490711	chr16:89490711:G:A	chr16:89490711:G:A	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr16	89490728	89490729	chr16:89490729:G:T	rs910392384	G	T	G	Hoxc9_MA0485.1	12	1	-	7.24207724134918	6.398341105600832	GGCTGTCAATCCC
chr16	89490731	89490732	chr16:89490732:A:G	chr16:89490732:A:G	A	G	A	Hoxc9_MA0485.1	9	1	-	7.24207724134918	0.3538514269755468	GGCTGTCAATCCC
chr16	89581423	89581424	chr16:89581424:C:T	rs181817626	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr16	89727642	89727643	chr16:89727643:G:A	rs72807539	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr16	89727643	89727644	chr16:89727644:C:A	rs72807540	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr16	89742762	89742763	chr16:89742763:C:T	rs34420680	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr16	89823248	89823249	chr16:89823249:G:C	rs72811595	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr16	89935951	89935952	chr16:89935952:G:A	rs12207	G	A	g	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr16	90093655	90093656	chr16:90093656:A:G	rs7498369	A	G	.	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	246075	246076	chr17:246076:G:A	rs62622824	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	281964	281965	chr17:281965:T:G	rs12451279	T	G	t	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr17	283600	283601	chr17:283601:C:G	rs72631438	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	357316	357317	chr17:357317:C:T	rs62055036	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	366971	366972	chr17:366972:C:T	rs4366776	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	870351	870352	chr17:870352:C:T	rs78301146	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr17	930496	930497	chr17:930497:C:T	rs11867444	C	T	-	Hoxc9_MA0485.1	17	0	-	0	0	.
chr17	978079	978080	chr17:978080:A:G	rs75638014	A	G	A	Hoxc9_MA0485.1	3	1	+	7.493905545557232	2.7122602811420102	CCCAGTAAATCTA
chr17	1051801	1051802	chr17:1051802:G:A	rs35379118	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr17	1169743	1169744	chr17:1169744:G:A	rs146005869	G	A	g	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	1230115	1230116	chr17:1230116:C:T	rs66765552	C	T	T	Hoxc9_MA0485.1	0	1	-	7.689835919367112	7.157020786076109	GTCAATCAATCAA
chr17	1260404	1260405	chr17:1260405:T:A	rs58466372	T	A	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	1260428	1260429	chr17:1260429:G:T	rs115223976	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr17	1390859	1390860	chr17:1390860:G:C	rs16945795	G	C	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	1454910	1454911	chr17:1454911:A:C	rs76708994	A	C	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr17	1454943	1454944	chr17:1454944:G:C	rs75610441	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	1456360	1456361	chr17:1456361:G:A	rs539173117	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	1456385	1456386	chr17:1456386:T:G	rs7218819	T	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	1693432	1693433	chr17:1693433:G:T	rs62090000	G	T	G	Hoxc9_MA0485.1	11	1	+	7.209366558163027	10.764310571822374	GGCAGTAAATCGC
chr17	2011709	2011710	chr17:2011710:A:C	rs140280289	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr17	2076566	2076567	chr17:2076567:G:A	rs757673993	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	2136438	2136439	chr17:2136439:T:C	rs9909515	T	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	2803358	2803359	chr17:2803359:G:T	rs74518291	G	T	g	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	2814138	2814139	chr17:2814139:G:C	rs140961518	G	C	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	2937495	2937496	chr17:2937496:T:C	rs8078257	T	C	C	Hoxc9_MA0485.1	8	1	-	7.194736755425752	0.29277824529079105	GCCAGTGAATCAT
chr17	2994800	2994801	chr17:2994801:T:C	rs7217169	T	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	3014892	3014893	chr17:3014893:T:C	rs9903645	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	3042120	3042121	chr17:3042121:C:T	rs66529056	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr17	3880031	3880032	chr17:3880032:A:G	rs146472492	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	3918545	3918546	chr17:3918546:T:C	rs4995290	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr17	4074237	4074238	chr17:4074238:G:A	rs34760976	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	4252833	4252834	chr17:4252834:T:A	rs8074058	T	A	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr17	4252864	4252865	chr17:4252865:G:A	rs8068429	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	4304593	4304594	chr17:4304594:A:C	rs148560560	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	4488230	4488231	chr17:4488231:G:A	rs74694580	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr17	4599424	4599425	chr17:4599425:A:C	rs73973313	A	C	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr17	4617803	4617804	chr17:4617804:A:G	rs8068656	A	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr17	4852784	4852785	chr17:4852785:A:G	rs111252762	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	4852910	4852911	chr17:4852911:G:C	rs1371020007	G	C	-	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr17	5017064	5017065	chr17:5017065:C:T	rs3786046	C	T	C	Hoxc9_MA0485.1	1	1	-	7.939261499078323	6.37981792516826	GGCAATAACTCAC
chr17	5197180	5197181	chr17:5197181:A:G	chr17:5197181:A:G	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr17	5510901	5510902	chr17:5510902:C:T	rs73973823	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	5855261	5855262	chr17:5855262:A:G	rs888324	A	G	G	Hoxc9_MA0485.1	2	1	-	7.520850042143314	8.897868519304538	GGTAATGAATCTC
chr17	5869714	5869715	chr17:5869715:G:A	rs12951310	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr17	5951794	5951795	chr17:5951795:C:T	rs11078598	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	6084518	6084519	chr17:6084519:G:A	rs745732306	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr17	6084520	6084521	chr17:6084521:G:A	rs147321449	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr17	6095594	6095595	chr17:6095595:G:A	rs8069520	G	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	6154939	6154940	chr17:6154940:C:T	rs74875452	C	T	C	Hoxc9_MA0485.1	0	1	-	6.355677300770858	5.8228621674798555	GGCCGTCAAACAC
chr17	6242897	6242898	chr17:6242898:G:A	rs3865357	G	A	G	Hoxc9_MA0485.1	12	1	-	8.662215520549271	8.408218566784718	GCACATAAATTAC
chr17	6242902	6242903	chr17:6242903:T:G	rs3865358	T	G	T	Hoxc9_MA0485.1	7	1	-	8.662215520549271	1.7579864513436905	GCACATAAATTAC
chr17	6242907	6242908	chr17:6242908:T:C	rs6502940	T	C	C	Hoxc9_MA0485.1	2	1	-	8.662215520549271	7.885734351231714	GCACATAAATTAC
chr17	6374158	6374159	chr17:6374159:T:A	rs7212151	T	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr17	6517230	6517231	chr17:6517231:C:T	rs7218891	C	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	6652702	6652703	chr17:6652703:A:G	rs7226265	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr17	6811640	6811641	chr17:6811641:C:T	rs34240531	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr17	7016232	7016233	chr17:7016233:T:A	rs117506053	T	A	T	Hoxc9_MA0485.1	9	1	+	9.796622776956568	5.96898020845654	ACCTGTAAATCAC
chr17	7044285	7044286	chr17:7044286:A:G	rs149747588	A	G	A	Hoxc9_MA0485.1	2	1	+	7.82537205892121	7.048890889603656	GGATATCAATCAG
chr17	7046936	7046937	chr17:7046937:T:C	rs11078664	T	C	t	Hoxc9_MA0485.1	4	1	-	8.192709200274255	7.024945486282672	TGCAATAAATATC
chr17	7052125	7052126	chr17:7052126:G:A	rs17203148	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	7077284	7077285	chr17:7077285:C:T	rs60019421	C	T	-	Hoxc9_MA0485.1	28	0	+	0	0	.
chr17	7332720	7332721	chr17:7332721:C:T	chr17:7332721:C:T	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	7332736	7332737	chr17:7332737:G:A	rs2871334	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	7332747	7332748	chr17:7332748:T:C	rs112954715	T	C	T	Hoxc9_MA0485.1	4	1	-	8.192709200274255	7.024945486282672	TGCAATAAATATC
chr17	7422803	7422804	chr17:7422804:A:G	rs11652328	A	G	G	Hoxc9_MA0485.1	9	1	-	7.725536029187553	0.8373102148139192	CCAAATAAATCAG
chr17	7550601	7550602	chr17:7550602:C:T	rs12940684	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	7574158	7574159	chr17:7574159:A:G	rs4968214	A	G	G	Hoxc9_MA0485.1	9	1	-	8.720073667472812	1.8318478530991817	TGCCATCAATCTG
chr17	7641932	7641933	chr17:7641933:C:T	rs1642807	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	7728375	7728376	chr17:7728376:G:T	rs62062609	G	T	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr17	7862909	7862910	chr17:7862910:T:C	rs6503066	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	7887663	7887664	chr17:7887664:A:C	rs1026842230	A	C	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	8281231	8281232	chr17:8281232:T:C	rs62063148	T	C	c	Hoxc9_MA0485.1	29	0	-	0	0	.
chr17	8383283	8383284	chr17:8383284:G:T	rs541954604	G	T	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	8383315	8383316	chr17:8383316:G:A	rs569869931	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr17	8610822	8610823	chr17:8610823:T:C	rs4128515	T	C	T	Hoxc9_MA0485.1	12	1	+	8.922386354068513	9.176383307833065	GTTTATAAATCAT
chr17	8700835	8700836	chr17:8700836:T:C	rs1017346	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	8722691	8722692	chr17:8722692:A:C	rs7219141	A	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	8832904	8832905	chr17:8832905:C:T	rs758038980	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr17	8862094	8862095	chr17:8862095:C:T	rs8067644	C	T	C	Hoxc9_MA0485.1	1	1	-	7.521646565667628	5.962202991757565	TGCTGTCAATCAG
chr17	8920450	8920451	chr17:8920451:G:A	rs9895992	G	A	A	Hoxc9_MA0485.1	0	1	+	10.046254792907495	9.513439659616493	GGCAGTAAATCTG
chr17	9052949	9052950	chr17:9052950:T:C	rs75739334	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	9052967	9052968	chr17:9052968:G:T	rs8069536	G	T	G	Hoxc9_MA0485.1	3	1	-	7.757755508933391	7.023004301362922	AGTCATAAATTCC
chr17	9145089	9145090	chr17:9145090:C:T	rs77572348	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	9346792	9346793	chr17:9346793:A:G	rs59987625	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr17	9348738	9348739	chr17:9348739:A:T	rs73270048	A	T	A	Hoxc9_MA0485.1	7	1	+	7.8476698982181174	2.651818689301543	GGATGTAAATCTA
chr17	9401989	9401990	chr17:9401990:G:C	rs12450630	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	9447170	9447171	chr17:9447171:C:T	rs2032945	C	T	C	Hoxc9_MA0485.1	6	1	+	7.747243140743044	6.3918499705365095	GGCAGTCAATCTA
chr17	9769816	9769817	chr17:9769817:T:C	rs8069628	T	C	T	Hoxc9_MA0485.1	4	1	-	8.909000312729711	7.741236598738128	ATCTATAAATCTT
chr17	9968976	9968977	chr17:9968977:G:C	rs139136952	G	C	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	10088664	10088665	chr17:10088665:T:C	rs142234929	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr17	10115182	10115183	chr17:10115183:T:C	rs9901916	T	C	t	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	10274391	10274392	chr17:10274392:C:G	rs72812892	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	10276363	10276364	chr17:10276364:C:A	rs4791965	C	A	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	10292807	10292808	chr17:10292808:G:C	rs2016196	G	C	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	10318831	10318832	chr17:10318832:A:G	rs2074873	A	G	G	Hoxc9_MA0485.1	7	1	+	6.8933472552348825	-0.010881813970696375	TGTCGTCAATCTC
chr17	10755447	10755448	chr17:10755448:G:A	rs7211233	G	A	G	Hoxc9_MA0485.1	2	1	-	8.818433497461355	7.441415020300128	ACCCATGAATCAC
chr17	10872496	10872497	chr17:10872497:C:G	rs753566	C	G	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	10896688	10896689	chr17:10896689:C:A	rs202596	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	10907073	10907074	chr17:10907074:T:C	rs2159054	T	C	T	Hoxc9_MA0485.1	1	1	-	9.688514734163247	11.247958308073306	CACAATAAATCAT
chr17	11242217	11242218	chr17:11242218:T:G	rs72635524	T	G	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	11242220	11242221	chr17:11242221:T:G	rs1468933412	T	G	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	11332803	11332804	chr17:11332804:A:G	rs205035	A	G	G	Hoxc9_MA0485.1	6	1	+	8.073446754801923	5.039240988292504	TCCAATAAATTAG
chr17	11528934	11528935	chr17:11528935:G:A	rs4792146	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr17	11711250	11711251	chr17:11711251:T:C	rs10153244	T	C	T	Hoxc9_MA0485.1	8	1	-	9.041070142483708	2.1391116323487487	GGCTGTCAATCAT
chr17	11742911	11742912	chr17:11742912:T:C	rs9906083	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	12256243	12256244	chr17:12256244:G:A	rs10521195	G	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	12472418	12472419	chr17:12472419:G:A	rs7223279	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	12472457	12472458	chr17:12472458:T:C	rs2159537	T	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	12709314	12709315	chr17:12709315:C:T	rs55986665	C	T	C	Hoxc9_MA0485.1	0	1	+	8.063540221567234	8.295883879086603	CCCCATGAATCAC
chr17	12972948	12972949	chr17:12972949:T:C	rs75780741	T	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	13134163	13134164	chr17:13134164:G:A	rs77355986	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	13158968	13158969	chr17:13158969:T:C	rs2529899	T	C	t	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	13158974	13158975	chr17:13158975:G:A	rs114075133	G	A	G	Hoxc9_MA0485.1	12	1	-	8.189663485175203	7.935666531410651	CCCAATCAATCAC
chr17	13204838	13204839	chr17:13204839:C:T	rs11651431	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr17	13204872	13204873	chr17:13204873:G:A	rs9674785	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	13411066	13411067	chr17:13411067:G:A	rs117857045	G	A	G	Hoxc9_MA0485.1	1	1	+	7.956698748862752	6.397255174952689	TGCCTTAAATCAA
chr17	13411083	13411084	chr17:13411084:C:A	rs9898623	C	A	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	13429810	13429811	chr17:13429811:C:T	rs3884646	C	T	c	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	13549065	13549066	chr17:13549066:C:T	rs563554075	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	13569580	13569581	chr17:13569581:C:T	rs116546659	C	T	C	Hoxc9_MA0485.1	4	1	-	9.322445398092446	10.49020911208403	GGCCGTGAATCAC
chr17	13647796	13647797	chr17:13647797:G:T	rs576142428	G	T	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	13785116	13785117	chr17:13785117:T:G	rs4792396	T	G	T	Hoxc9_MA0485.1	6	1	-	8.479248367237503	6.305917071906518	AGCCTTAAATCAA
chr17	13785591	13785592	chr17:13785592:C:T	rs73255845	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	13999569	13999570	chr17:13999570:T:C	rs8079249	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr17	14353385	14353386	chr17:14353386:C:T	rs7226075	C	T	C	Hoxc9_MA0485.1	2	1	+	9.388741326824249	8.011722849663025	ACCTATAAATCTG
chr17	14359971	14359972	chr17:14359972:G:A	rs9901137	G	A	A	Hoxc9_MA0485.1	2	1	-	7.917158588727192	6.540140111565967	CACAGTAAATCTC
chr17	14769939	14769940	chr17:14769940:G:C	rs75968284	G	C	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	14770616	14770617	chr17:14770617:C:T	rs9901522	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	14777212	14777213	chr17:14777213:G:A	rs17708352	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr17	14974712	14974713	chr17:14974713:A:G	rs2041272	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	14981680	14981681	chr17:14981681:C:A	rs9891516	C	A	A	Hoxc9_MA0485.1	0	1	-	8.09317549149388	7.037810739828125	GGCAGTTAATCAC
chr17	15019562	15019563	chr17:15019563:A:G	rs9906341	A	G	G	Hoxc9_MA0485.1	2	1	+	8.231910770609648	7.455429601292094	ACACATAAATCTA
chr17	15155958	15155959	chr17:15155959:G:T	rs9303126	G	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr17	15156000	15156001	chr17:15156001:C:G	rs9303127	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	15307778	15307779	chr17:15307779:A:C	rs149638326	A	C	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	15349222	15349223	chr17:15349223:G:A	rs184877310	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	15349247	15349248	chr17:15349248:C:T	rs2610064	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr17	15497363	15497364	chr17:15497364:T:C	rs1548681	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	15525662	15525663	chr17:15525663:T:C	rs151117211	T	C	t	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	15893406	15893407	chr17:15893407:A:G	rs9913234	A	G	a	Hoxc9_MA0485.1	17	0	+	0	0	.
chr17	16107605	16107606	chr17:16107606:A:G	rs4566208	A	G	G	Hoxc9_MA0485.1	9	1	-	8.472295488076197	1.584069673702564	GTTAATAAATCTC
chr17	16982908	16982909	chr17:16982909:T:C	rs8066321	T	C	C	Hoxc9_MA0485.1	4	1	-	6.6201858093878725	5.452422095396288	GGCCATAGATCAC
chr17	16995144	16995145	chr17:16995145:T:A	rs6416871	T	A	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr17	17332151	17332152	chr17:17332152:A:G	rs9902505	A	G	a	Hoxc9_MA0485.1	2	1	-	7.63504502336728	9.012063500528505	GGTCTTAAATCAA
chr17	17475952	17475953	chr17:17475953:A:C	rs1242499	A	C	C	Hoxc9_MA0485.1	8	1	+	7.859199196294376	3.008797024349717	TGCCATGAATCTG
chr17	17604590	17604591	chr17:17604591:A:G	rs35851484	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr17	17641720	17641721	chr17:17641721:G:A	rs74745677	G	A	g	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	17916342	17916343	chr17:17916343:G:A	rs7208190	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	17973781	17973782	chr17:17973782:C:T	rs11870660	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr17	18140451	18140452	chr17:18140452:C:G	rs854780	C	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	18266632	18266633	chr17:18266633:A:G	rs58042962	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr17	19614454	19614455	chr17:19614455:A:G	rs2120274	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	19898147	19898148	chr17:19898148:T:C	rs117977037	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	20018650	20018651	chr17:20018651:C:T	rs8079093	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr17	20094556	20094557	chr17:20094557:T:C	rs7208025	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	20268558	20268559	chr17:20268559:C:T	rs3850779	C	T	.	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr17	20276782	20276783	chr17:20276783:A:T	rs72832506	A	T	.	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	20762368	20762369	chr17:20762369:T:C	rs11658561	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	20770762	20770763	chr17:20770763:A:C	rs9907578	A	C	A	Hoxc9_MA0485.1	9	1	-	7.332939552346147	0.4447137379725158	AGCCATAAATGTC
chr17	20770778	20770779	chr17:20770779:A:G	rs8074459	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr17	20778829	20778830	chr17:20778830:C:T	rs59260356	C	T	c	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	20845412	20845413	chr17:20845413:A:G	rs8079974	A	G	.	Hoxc9_MA0485.1	14	0	-	0	0	.
chr17	20959456	20959457	chr17:20959457:A:G	rs7221189	A	G	.	Hoxc9_MA0485.1	8	1	+	8.483774884789105	1.5818163746541447	TTCAGTAAATCAC
chr17	21039283	21039284	chr17:21039284:T:C	rs537160981	T	C	T	Hoxc9_MA0485.1	6	1	-	7.783818173218648	4.749612406709228	TGCCATAAAACTC
chr17	21337849	21337850	chr17:21337850:C:T	rs569828659	C	T	C	Hoxc9_MA0485.1	8	1	+	6.788193213742329	4.736636875552031	GGCCGTAACTCAG
chr17	21345129	21345130	chr17:21345130:T:C	rs35555831	T	C	C	Hoxc9_MA0485.1	3	1	-	8.213152666033588	3.4315074016183664	GACAATCAATCAA
chr17	21599988	21599989	chr17:21599989:G:A	rs11204367	G	A	g	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	21753332	21753333	chr17:21753333:A:T	rs1358556365	A	T	.	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	21756361	21756362	chr17:21756362:T:C	rs1202365474	T	C	.	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	22139908	22139909	chr17:22139909:G:A	rs1457472143	G	A	.	Hoxc9_MA0485.1	0	1	+	8.678840958050595	8.146025824759592	GGCAATAAATTCT
chr17	22154602	22154603	chr17:22154603:A:G	rs374668015	A	G	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	22607606	22607607	chr17:22607607:G:A	rs1047394152	G	A	g	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	26986877	26986878	chr17:26986878:T:C	rs4528610	T	C	T	Hoxc9_MA0485.1	0	1	-	7.880271162332963	8.413086295623964	AGCCATCAATAAT
chr17	27381222	27381223	chr17:27381223:G:A	rs147102968	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	27504809	27504810	chr17:27504810:C:T	rs72847754	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	27581637	27581638	chr17:27581638:C:G	rs35643366	C	G	c	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	27748473	27748474	chr17:27748474:T:C	rs7215373	T	C	C	Hoxc9_MA0485.1	8	1	-	7.273393644919078	0.37143513478411777	AGCCATGAATAAC
chr17	27748497	27748498	chr17:27748498:G:A	rs7207044	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	27756892	27756893	chr17:27756893:A:G	rs56090761	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	27871354	27871355	chr17:27871355:A:G	rs4796172	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr17	27892883	27892884	chr17:27892884:T:C	rs115063805	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	27991560	27991561	chr17:27991561:A:G	rs4795195	A	G	A	Hoxc9_MA0485.1	4	1	+	10.295650200759388	9.127886486767805	TGACATAAATCAT
chr17	27994842	27994843	chr17:27994843:C:T	rs571980323	C	T	C	Hoxc9_MA0485.1	12	1	-	8.451626072421762	8.325945715588292	AGAAGTAAATCAG
chr17	28010435	28010436	chr17:28010436:G:A	rs11868510	G	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	28326275	28326276	chr17:28326276:G:A	rs188189867	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	28498875	28498876	chr17:28498876:T:G	rs79677589	T	G	T	Hoxc9_MA0485.1	9	1	+	12.991599745302448	6.103373930928815	AGCCATAAATCAC
chr17	28518966	28518967	chr17:28518967:G:T	rs11654039	G	T	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr17	28755602	28755603	chr17:28755603:A:C	rs562148665	A	C	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr17	28755630	28755631	chr17:28755631:T:C	rs116174397	T	C	T	Hoxc9_MA0485.1	4	1	-	6.36845941469394	5.200695700702357	GGCCATAAGTCAT
chr17	28836276	28836277	chr17:28836277:C:A	rs7211502	C	A	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	29027839	29027840	chr17:29027840:A:T	rs873364	A	T	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	29590752	29590753	chr17:29590753:A:G	rs3110496	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr17	29919863	29919864	chr17:29919864:T:C	rs142743237	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	30219895	30219896	chr17:30219896:C:T	rs2020942	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	30234736	30234737	chr17:30234737:A:T	rs2020933	A	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	30824759	30824760	chr17:30824760:C:T	rs905766930	C	T	.	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	30824763	30824764	chr17:30824764:T:A	rs553015665	T	A	.	Hoxc9_MA0485.1	27	0	-	0	0	.
chr17	30824807	30824808	chr17:30824808:C:A	rs7213542	C	A	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	30826306	30826307	chr17:30826307:C:T	rs56146117	C	T	.	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	30879346	30879347	chr17:30879347:A:C	rs117202596	A	C	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	30920307	30920308	chr17:30920308:T:A	rs186600364	T	A	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr17	30998004	30998005	chr17:30998005:G:C	rs12453269	G	C	g	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr17	31155682	31155683	chr17:31155683:C:T	rs2269856	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	31316543	31316544	chr17:31316544:C:A	rs116748018	C	A	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	31320783	31320784	chr17:31320784:C:T	rs3785955	C	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr17	31470362	31470363	chr17:31470363:G:A	rs12453638	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	31561574	31561575	chr17:31561575:A:G	rs75259244	A	G	a	Hoxc9_MA0485.1	16	0	+	0	0	.
chr17	31561898	31561899	chr17:31561899:G:A	rs116767492	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	31579581	31579582	chr17:31579582:A:G	rs17246483	A	G	A	Hoxc9_MA0485.1	5	1	-	8.869312234872048	4.384000872233563	ACTTATAAATCAG
chr17	31628035	31628036	chr17:31628036:C:G	rs315458	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	31907739	31907740	chr17:31907740:A:C	rs556472070	A	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	32303600	32303601	chr17:32303601:A:G	rs112903291	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	32343113	32343114	chr17:32343114:C:A	rs561147970	C	A	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	32483901	32483902	chr17:32483902:A:G	rs554183385	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	32520928	32520929	chr17:32520929:C:T	rs537207703	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	32658450	32658451	chr17:32658451:A:G	rs2729337	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	32970618	32970619	chr17:32970619:C:A	rs2346389	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	33141382	33141383	chr17:33141383:G:A	rs4426392	G	A	A	Hoxc9_MA0485.1	10	1	-	8.903318605492458	7.099482701183708	GAATATAAATCAT
chr17	33280851	33280852	chr17:33280852:G:A	rs1532457	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr17	33332585	33332586	chr17:33332586:C:T	rs320632	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	33381221	33381222	chr17:33381222:G:A	rs931795	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr17	33425565	33425566	chr17:33425566:A:G	rs4795782	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr17	33438412	33438413	chr17:33438413:G:A	rs11080220	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	33438436	33438437	chr17:33438437:A:G	rs1038513081	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	33451336	33451337	chr17:33451337:A:G	rs2347157	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr17	33876583	33876584	chr17:33876584:G:A	rs424040	G	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr17	33957030	33957031	chr17:33957031:T:C	rs9902981	T	C	T	Hoxc9_MA0485.1	8	1	-	9.177230242213838	2.27527173207888	GACAATAAATCCC
chr17	34248632	34248633	chr17:34248633:C:T	rs77251345	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	34418613	34418614	chr17:34418614:T:G	rs159244	T	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr17	34457382	34457383	chr17:34457383:G:A	rs73276272	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	34616358	34616359	chr17:34616359:C:T	rs12951344	C	T	C	Hoxc9_MA0485.1	0	1	-	7.784393105754388	7.2515779724633855	GGTTGTAAATCCT
chr17	34616370	34616371	chr17:34616371:A:G	rs16970097	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	34641988	34641989	chr17:34641989:G:A	rs12602358	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr17	34684423	34684424	chr17:34684424:A:T	rs4795968	A	T	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	34702778	34702779	chr17:34702779:T:C	rs11652872	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	34725187	34725188	chr17:34725188:G:A	rs138462188	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr17	34981881	34981882	chr17:34981882:A:T	rs140520392	A	T	A	Hoxc9_MA0485.1	2	1	-	9.631884651061203	9.089500155818671	ACTCATAAATCAA
chr17	35256682	35256683	chr17:35256683:C:T	rs11871533	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr17	35257476	35257477	chr17:35257477:A:G	rs17547894	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	35345686	35345687	chr17:35345687:G:C	rs11080339	G	C	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	35372938	35372939	chr17:35372939:C:G	rs988277675	C	G	c	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	35510235	35510236	chr17:35510236:G:T	rs55661426	G	T	g	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	35568511	35568512	chr17:35568512:T:C	rs115656017	T	C	T	Hoxc9_MA0485.1	8	1	-	7.955282861304641	1.0533243511696826	AGTTATAAATCCG
chr17	35589726	35589727	chr17:35589727:A:C	chr17:35589727:A:C	A	C	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr17	35809740	35809741	chr17:35809741:A:G	chr17:35809741:A:G	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr17	35809778	35809779	chr17:35809779:A:G	chr17:35809779:A:G	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr17	36079547	36079548	chr17:36079548:A:G	rs11651881	A	G	G	Hoxc9_MA0485.1	7	1	+	8.796301631718725	1.8920725625131485	TGCAATAAATAAT
chr17	36147095	36147096	chr17:36147096:A:G	rs2106883	A	G	A	Hoxc9_MA0485.1	8	1	+	9.034198791693168	2.1322402815582095	TGTCATAAATTAT
chr17	36148877	36148878	chr17:36148878:T:C	rs139386143	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	36204555	36204556	chr17:36204556:C:G	rs1375141658	C	G	.	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr17	36205812	36205813	chr17:36205813:G:C	rs79616333	G	C	.	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	36207446	36207447	chr17:36207447:T:C	rs146271493	T	C	.	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	36207463	36207464	chr17:36207464:A:G	rs112816521	A	G	.	Hoxc9_MA0485.1	7	1	+	8.408031315892522	1.5038022466869445	TGTCATAAATAAC
chr17	36646071	36646072	chr17:36646072:G:A	rs3815052	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	36701493	36701494	chr17:36701494:C:T	rs4796244	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	36827362	36827363	chr17:36827363:T:C	rs112930850	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	37047797	37047798	chr17:37047798:G:C	rs7225497	G	C	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	37062174	37062175	chr17:37062175:A:G	rs6607360	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	37476545	37476546	chr17:37476546:C:T	rs115185941	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	37676733	37676734	chr17:37676734:A:T	rs3094520	A	T	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	37677537	37677538	chr17:37677538:G:A	rs3094519	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	37683730	37683731	chr17:37683731:A:G	rs17138522	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr17	37710306	37710307	chr17:37710307:T:G	chr17:37710307:T:G	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr17	38256141	38256142	chr17:38256142:C:A	rs35727513	C	A	-	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	38435889	38435890	chr17:38435890:C:T	rs7214120	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr17	38609604	38609605	chr17:38609605:G:C	rs7214959	G	C	g	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	38703839	38703840	chr17:38703840:G:C	rs762869320	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	38794419	38794420	chr17:38794420:T:G	rs4794790	T	G	T	Hoxc9_MA0485.1	5	1	+	7.290064772227292	0.39152179650769753	GGTCATCAATAAC
chr17	38824911	38824912	chr17:38824912:A:C	chr17:38824912:A:C	A	C	A	Hoxc9_MA0485.1	5	1	-	7.3575756786068585	0.45903270288726433	GGCTGTAAATTCT
chr17	38981040	38981041	chr17:38981041:A:G	rs62075223	A	G	a	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	38981045	38981046	chr17:38981046:C:T	rs9893946	C	T	N	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr17	39067382	39067383	chr17:39067383:T:C	rs3254	T	C	T	Hoxc9_MA0485.1	9	1	+	9.330250533599825	2.4420247192261932	TCCTATAAATCTT
chr17	39197284	39197285	chr17:39197285:C:T	chr17:39197285:C:T	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr17	39607387	39607388	chr17:39607388:C:T	rs142654662	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	39632689	39632690	chr17:39632690:C:T	rs967798776	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	39634685	39634686	chr17:39634686:C:T	rs3764352	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	39659050	39659051	chr17:39659051:G:C	rs11556624	G	C	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr17	39695789	39695790	chr17:39695790:T:G	chr17:39695790:T:G	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	39980779	39980780	chr17:39980780:A:G	rs3859189	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr17	40345817	40345818	chr17:40345818:C:T	rs140531152	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	40567962	40567963	chr17:40567963:A:G	rs62066595	A	G	A	Hoxc9_MA0485.1	12	1	+	8.009086801963353	8.134767158796823	ATCTGTAAATCAA
chr17	40798650	40798651	chr17:40798651:C:T	rs4527073	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr17	40820463	40820464	chr17:40820464:C:T	rs1799915	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	40854491	40854492	chr17:40854492:C:T	rs115084096	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	40889352	40889353	chr17:40889353:T:C	rs76983130	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	41092054	41092055	chr17:41092055:A:G	rs4986672	A	G	a	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr17	41302223	41302224	chr17:41302224:A:T	rs1001191	A	T	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	41442883	41442884	chr17:41442884:G:A	rs3826548	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	41549752	41549753	chr17:41549753:C:G	rs117748589	C	G	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	41549774	41549775	chr17:41549775:T:A	rs10512486	T	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr17	41793958	41793959	chr17:41793959:A:C	chr17:41793959:A:C	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr17	41827596	41827597	chr17:41827597:G:C	rs1128966	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	42236917	42236918	chr17:42236918:A:C	rs60100233	A	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	42242071	42242072	chr17:42242072:C:T	rs6503691	C	T	T	Hoxc9_MA0485.1	2	1	+	7.596395664897237	6.219377187736013	CGCCATTAATCTT
chr17	42390191	42390192	chr17:42390192:G:C	rs4796793	G	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	42660907	42660908	chr17:42660908:C:G	rs181123096	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	42660908	42660909	chr17:42660909:C:T	rs1475142565	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	43140305	43140306	chr17:43140306:T:C	rs1135214	T	C	t	Hoxc9_MA0485.1	2	1	+	9.639224663281125	11.016243140442349	TGTAATAAATCAG
chr17	43397042	43397043	chr17:43397043:C:T	rs117147954	C	T	c	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	43582492	43582493	chr17:43582493:G:A	rs9916264	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr17	43656757	43656758	chr17:43656758:C:T	rs56119632	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr17	43656767	43656768	chr17:43656768:T:C	rs1811196	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr17	43910459	43910460	chr17:43910460:C:T	rs115283089	C	T	C	Hoxc9_MA0485.1	12	1	-	8.039598445228084	7.913918088394614	GTCCATAAATAAG
chr17	44007781	44007782	chr17:44007782:T:C	rs228773	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	44069285	44069286	chr17:44069286:C:T	rs62078913	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr17	44138424	44138425	chr17:44138425:G:A	rs187695998	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	44533953	44533954	chr17:44533954:A:G	rs543272118	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	44807979	44807980	chr17:44807980:T:G	rs149970901	T	G	T	Hoxc9_MA0485.1	0	1	-	8.852822937711702	8.097929661817583	ATCTGTAAATCAC
chr17	44898745	44898746	chr17:44898746:C:T	rs8068761	C	T	T	Hoxc9_MA0485.1	1	1	-	7.711150190317075	6.151706616407014	AGCAATAAAACAG
chr17	44998324	44998325	chr17:44998325:G:A	rs12452088	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	45151931	45151932	chr17:45151932:A:C	rs8070447	A	C	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr17	45263406	45263407	chr17:45263407:C:T	rs147386015	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr17	45439885	45439886	chr17:45439886:T:C	rs35489312	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	45583666	45583667	chr17:45583667:T:C	rs1627430	T	C	.	Hoxc9_MA0485.1	2	1	+	8.781635278072102	10.158653755233326	TGTAATAAATCTG
chr17	45584434	45584435	chr17:45584435:T:G	rs2668699	T	G	.	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	45628389	45628390	chr17:45628390:G:C	rs393838	G	C	c	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	45648893	45648894	chr17:45648894:C:T	rs1037500390	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	45731897	45731898	chr17:45731898:T:G	rs62054393	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	45737969	45737970	chr17:45737970:A:G	rs56298110	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	45752037	45752038	chr17:45752038:C:T	rs1880755	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr17	45752038	45752039	chr17:45752039:G:A	rs35350903	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	45862022	45862023	chr17:45862023:C:T	rs56026524	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	45938378	45938379	chr17:45938379:A:G	rs12150235	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr17	45952864	45952865	chr17:45952865:T:C	rs17650633	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr17	46139653	46139654	chr17:46139654:T:C	rs62063211	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	46164430	46164431	chr17:46164431:T:C	rs62060884	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr17	46186588	46186589	chr17:46186589:A:G	rs111466270	A	G	A	Hoxc9_MA0485.1	3	1	+	8.393200682019085	3.6115554176038627	AGGAGTAAATCAC
chr17	46211273	46211274	chr17:46211274:A:G	rs2668645	A	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	46211305	46211306	chr17:46211306:G:A	rs2696444	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	46235746	46235747	chr17:46235747:A:C	rs2696678	A	C	c	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr17	46235781	46235782	chr17:46235782:G:A	rs140388865	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	46269798	46269799	chr17:46269799:T:C	rs2732656	T	C	.	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	46738765	46738766	chr17:46738766:G:T	rs12325819	G	T	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	46968527	46968528	chr17:46968528:C:T	rs28451958	C	T	c	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	46968528	46968529	chr17:46968529:A:G	rs28553405	A	G	g	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	47001483	47001484	chr17:47001484:T:A	rs11079747	T	A	.	Hoxc9_MA0485.1	17	0	-	0	0	.
chr17	47194313	47194314	chr17:47194314:A:C	rs858671	A	C	C	Hoxc9_MA0485.1	5	1	-	8.51813436517777	1.6195913894581762	GGGAATAAATCTG
chr17	47200640	47200641	chr17:47200641:A:T	rs4968308	A	T	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr17	47201328	47201329	chr17:47201329:T:C	rs113960885	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	47201340	47201341	chr17:47201341:G:C	rs73316007	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr17	47201369	47201370	chr17:47201370:T:G	rs190370602	T	G	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	47201396	47201397	chr17:47201397:C:A	rs73316010	C	A	C	Hoxc9_MA0485.1	1	1	-	12.80635909967857	10.723598779102034	GGCCATAAATCAG
chr17	47277176	47277177	chr17:47277177:G:C	rs16941801	G	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	47350532	47350533	chr17:47350533:T:G	rs16941908	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr17	47987920	47987921	chr17:47987921:A:C	chr17:47987921:A:C	A	C	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr17	48011577	48011578	chr17:48011578:C:T	rs7216411	C	T	T	Hoxc9_MA0485.1	4	1	-	6.906803001920742	8.074566715912324	GGCCGTATATCAT
chr17	48049207	48049208	chr17:48049208:G:C	rs578250055	G	C	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	48492888	48492889	chr17:48492889:C:G	rs61476017	C	G	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	48575154	48575155	chr17:48575155:A:G	rs79057155	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	48577072	48577073	chr17:48577073:A:G	rs79154089	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	48577718	48577719	chr17:48577719:G:A	rs114727888	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	48602804	48602805	chr17:48602805:G:A	rs9897918	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	48626530	48626531	chr17:48626531:C:T	rs117606009	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	48702937	48702938	chr17:48702938:T:C	rs4793974	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	48750718	48750719	chr17:48750719:T:C	rs3107297	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr17	48851991	48851992	chr17:48851992:C:T	rs8076419	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	49122069	49122070	chr17:49122070:G:A	rs62078439	G	A	g	Hoxc9_MA0485.1	0	1	-	8.840529972320084	9.072873629839453	CGCAATAAATTTC
chr17	49197440	49197441	chr17:49197441:C:T	rs112702414	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	49448024	49448025	chr17:49448025:C:T	rs58988352	C	T	C	Hoxc9_MA0485.1	10	1	+	8.66376927826799	6.8599333739592385	GGATATAAATCCC
chr17	49470293	49470294	chr17:49470294:T:C	rs753683150	T	C	T	Hoxc9_MA0485.1	4	1	-	8.716788581503398	7.549024867511814	TGCCATGAATCAG
chr17	49589395	49589396	chr17:49589396:C:G	rs2537698	C	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr17	50112678	50112679	chr17:50112679:A:G	rs62060029	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr17	50319090	50319091	chr17:50319091:T:C	rs71379398	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	50420617	50420618	chr17:50420618:A:T	rs59955118	A	T	A	Hoxc9_MA0485.1	3	1	+	8.568794807595145	8.41529324214299	GACAATAAATTTC
chr17	50423917	50423918	chr17:50423918:T:C	rs116663398	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	50894463	50894464	chr17:50894464:C:T	rs56119751	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	50944625	50944626	chr17:50944626:G:A	chr17:50944626:G:A	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	50944881	50944882	chr17:50944882:C:G	rs9890711	C	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	51184388	51184389	chr17:51184389:T:C	rs8069453	T	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	51338011	51338012	chr17:51338012:C:A	rs62060120	C	A	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr17	51341001	51341002	chr17:51341002:G:A	rs78589614	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	51575335	51575336	chr17:51575336:C:T	rs11079972	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	51653515	51653516	chr17:51653516:T:C	rs7220388	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr17	51667139	51667140	chr17:51667140:T:C	rs9912507	T	C	c	Hoxc9_MA0485.1	4	1	-	7.839756049846874	6.671992335855291	GCCCATAAAACAG
chr17	52602033	52602034	chr17:52602034:C:T	rs4794361	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	52695523	52695524	chr17:52695524:A:G	rs1343951	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr17	52695542	52695543	chr17:52695543:T:C	rs1343952	T	C	T	Hoxc9_MA0485.1	4	1	-	9.723781093658522	8.556017379666937	TCCTATAAATCAG
chr17	53257788	53257789	chr17:53257789:G:A	rs34217721	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	53273316	53273317	chr17:53273317:G:A	rs16953084	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	54172836	54172837	chr17:54172837:T:C	rs1014045825	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr17	54945239	54945240	chr17:54945240:C:G	rs35717159	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr17	54957266	54957267	chr17:54957267:T:A	rs17817877	T	A	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr17	55016603	55016604	chr17:55016604:G:C	rs2787501	G	C	C	Hoxc9_MA0485.1	1	1	+	7.371286496745969	6.232326015414295	CGCTATCAATTAC
chr17	55238135	55238136	chr17:55238136:T:C	chr17:55238136:T:C	T	C	T	Hoxc9_MA0485.1	11	1	-	9.041729501062449	4.629196102194078	CCCTGTAAATCAC
chr17	55274183	55274184	chr17:55274184:G:A	rs9910340	G	A	G	Hoxc9_MA0485.1	12	1	-	8.985976303344962	8.73197934958041	CCTAATAAATCAC
chr17	55325603	55325604	chr17:55325604:G:T	rs143179035	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr17	55474031	55474032	chr17:55474032:A:G	rs12937392	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	55526592	55526593	chr17:55526593:T:C	rs1911716	T	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr17	55526602	55526603	chr17:55526603:T:C	rs144927312	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr17	55546471	55546472	chr17:55546472:G:A	rs4794600	G	A	G	Hoxc9_MA0485.1	1	1	-	6.25661832546966	5.312818486224795	GCCAGTCAATCCC
chr17	55654217	55654218	chr17:55654218:G:A	rs8074638	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr17	55710918	55710919	chr17:55710919:A:G	rs2033111	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	55816784	55816785	chr17:55816785:A:G	rs2060972	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	56542226	56542227	chr17:56542227:C:A	rs9898902	C	A	A	Hoxc9_MA0485.1	10	1	+	9.853668828073568	7.169668494199619	AACAATAAATCAA
chr17	56595633	56595634	chr17:56595634:G:A	chr17:56595634:G:A	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	56658943	56658944	chr17:56658944:C:T	rs34670427	C	T	C	Hoxc9_MA0485.1	10	1	+	9.072357660902494	7.268521756593743	AGATATAAATCTT
chr17	56697483	56697484	chr17:56697484:G:C	rs62075153	G	C	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr17	56918374	56918375	chr17:56918375:T:A	rs11869532	T	A	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	57004424	57004425	chr17:57004425:G:A	rs188802591	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	57016783	57016784	chr17:57016784:A:G	rs880266	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	57196318	57196319	chr17:57196319:G:A	rs113074665	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	57215515	57215516	chr17:57215516:G:A	rs117315642	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr17	57453690	57453691	chr17:57453691:C:T	rs9898141	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr17	57530431	57530432	chr17:57530432:A:G	rs9908229	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	57542051	57542052	chr17:57542052:G:A	rs142035871	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	57700085	57700086	chr17:57700086:C:T	rs8065258	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	57700091	57700092	chr17:57700092:T:G	rs1392243773	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	57700112	57700113	chr17:57700113:C:T	rs565099575	C	T	C	Hoxc9_MA0485.1	4	1	-	9.072392888876049	10.240156602867632	CCCCGTAAATCTC
chr17	57912296	57912297	chr17:57912297:G:A	rs768259601	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	58411917	58411918	chr17:58411918:T:C	rs12603174	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	58642233	58642234	chr17:58642234:G:C	rs568987371	G	C	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	58679415	58679416	chr17:58679416:C:T	rs544749410	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	58679426	58679427	chr17:58679427:C:A	rs141839411	C	A	C	Hoxc9_MA0485.1	3	1	+	7.264794923041132	6.530043715470663	AGGCATCAATCTC
chr17	58728961	58728962	chr17:58728962:G:A	rs561618066	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr17	58786545	58786546	chr17:58786546:C:A	rs760783624	C	A	C	Hoxc9_MA0485.1	1	1	-	8.316809185915721	6.234048865339184	GGACATGAATCAT
chr17	58786556	58786557	chr17:58786557:C:T	rs7212271	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	58986805	58986806	chr17:58986806:A:G	rs6503890	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	59159538	59159539	chr17:59159539:G:A	rs7217845	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr17	59204731	59204732	chr17:59204732:G:A	rs6503904	G	A	-	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	59219799	59219800	chr17:59219800:G:A	rs9903295	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	59360803	59360804	chr17:59360804:A:G	rs1037364	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	59425709	59425710	chr17:59425710:C:T	rs117406808	C	T	C	Hoxc9_MA0485.1	11	1	+	8.220900989126248	9.416301458816307	GTCCGTAAATCCC
chr17	59749243	59749244	chr17:59749244:A:G	rs60451858	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	59754240	59754241	chr17:59754241:A:G	rs148052227	A	G	A	Hoxc9_MA0485.1	9	1	-	7.887750903434376	0.9995250890607436	GGTCATAAATATG
chr17	59764738	59764739	chr17:59764739:T:C	rs545501007	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	59793418	59793419	chr17:59793419:G:C	rs8074774	G	C	c	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	59855493	59855494	chr17:59855494:C:T	rs183202679	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	59972909	59972910	chr17:59972910:C:G	rs113515548	C	G	c	Hoxc9_MA0485.1	32	0	-	0	0	.
chr17	60091344	60091345	chr17:60091345:T:A	rs80274708	T	A	t	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	60513234	60513235	chr17:60513235:A:G	rs9909389	A	G	A	Hoxc9_MA0485.1	6	1	+	7.929076454047011	4.894870687537588	TGAAGTAAATCAG
chr17	60571094	60571095	chr17:60571095:A:G	rs7218061	A	G	A	Hoxc9_MA0485.1	4	1	+	8.790986564779843	7.6232228507882605	ACATATAAATCAT
chr17	60677862	60677863	chr17:60677863:T:G	rs750220253	T	G	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	61150288	61150289	chr17:61150289:T:A	rs7208945	T	A	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	61205904	61205905	chr17:61205905:C:T	rs4968537	C	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	61205907	61205908	chr17:61205908:T:C	rs4968538	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	61303226	61303227	chr17:61303227:A:G	rs3853830	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	61325604	61325605	chr17:61325605:G:T	rs756876756	G	T	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr17	61392794	61392795	chr17:61392795:C:T	rs144223186	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	61401282	61401283	chr17:61401283:G:A	rs12952625	G	A	A	Hoxc9_MA0485.1	10	1	-	8.761800401204322	6.957964496895571	AGAAATAAATCTG
chr17	61445060	61445061	chr17:61445061:A:G	rs1049101626	A	G	A	Hoxc9_MA0485.1	0	1	+	10.161774281655877	10.69458941494688	AGTAATAAATCAG
chr17	61457625	61457626	chr17:61457626:T:G	rs3744447	T	G	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr17	61947029	61947030	chr17:61947030:C:G	rs8080298	C	G	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	62186978	62186979	chr17:62186979:C:T	rs115459570	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr17	62457715	62457716	chr17:62457716:G:A	rs733667	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	63078809	63078810	chr17:63078810:A:G	rs148264971	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr17	63275344	63275345	chr17:63275345:A:T	chr17:63275345:A:T	A	T	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr17	63275373	63275374	chr17:63275374:T:C	chr17:63275374:T:C	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr17	63381324	63381325	chr17:63381325:A:G	rs968028820	A	G	A	Hoxc9_MA0485.1	4	1	+	8.000612602764868	6.832848888773284	AGCCATAAATACT
chr17	63387972	63387973	chr17:63387973:A:G	rs551361419	A	G	A	Hoxc9_MA0485.1	9	1	-	9.225859226354649	2.3376334119810176	AGAAATAAATCTT
chr17	64088004	64088005	chr17:64088005:T:C	rs78975532	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	64624181	64624182	chr17:64624182:C:G	rs8064907	C	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr17	64962693	64962694	chr17:64962694:C:T	rs114579658	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr17	65070621	65070622	chr17:65070622:A:G	rs8082032	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr17	65100960	65100961	chr17:65100961:C:T	rs4790961	C	T	T	Hoxc9_MA0485.1	3	1	+	6.425719407445018	5.537466634422394	GGCCGTGAATCCA
chr17	65137735	65137736	chr17:65137736:T:A	rs115847645	T	A	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	65229200	65229201	chr17:65229201:T:C	rs6504285	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr17	65231806	65231807	chr17:65231807:C:T	rs28476544	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr17	65262404	65262405	chr17:65262405:T:G	chr17:65262405:T:G	T	G	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	65463544	65463545	chr17:65463545:C:T	rs9898820	C	T	C	Hoxc9_MA0485.1	1	1	+	6.809751525568963	5.865951686324097	GCTCGTCAATCTC
chr17	65541779	65541780	chr17:65541780:T:C	rs11867417	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr17	65622639	65622640	chr17:65622640:A:G	rs541159925	A	G	A	Hoxc9_MA0485.1	11	1	-	8.072991549058251	6.877591079368194	AGTCATAAATATC
chr17	65886566	65886567	chr17:65886567:G:C	rs75006747	G	C	C	Hoxc9_MA0485.1	2	1	-	7.815516276200582	5.119632134479271	GTCAATCAATCAG
chr17	66256227	66256228	chr17:66256228:G:A	rs1383607951	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	66283212	66283213	chr17:66283213:A:C	rs11653415	A	C	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	66314456	66314457	chr17:66314457:T:A	rs35512343	T	A	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	66354722	66354723	chr17:66354723:C:T	rs114104137	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	66354723	66354724	chr17:66354724:G:A	rs73341556	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	66364665	66364666	chr17:66364666:G:A	rs112978909	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	66383121	66383122	chr17:66383122:T:C	rs6504417	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	66404013	66404014	chr17:66404014:G:A	rs115669665	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	66571043	66571044	chr17:66571044:T:C	rs7219499	T	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr17	66580943	66580944	chr17:66580944:C:T	rs9909524	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr17	66785267	66785268	chr17:66785268:C:T	rs56007627	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	66945753	66945754	chr17:66945754:C:T	rs117290011	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	67039098	67039099	chr17:67039099:T:C	rs4790993	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr17	67076443	67076444	chr17:67076444:C:T	rs9892296	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr17	67522019	67522020	chr17:67522020:C:T	rs191385557	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	67552423	67552424	chr17:67552424:G:T	rs2916133	G	T	T	Hoxc9_MA0485.1	0	1	-	7.903190629569182	8.6580839054633	CACTGTAAATCAG
chr17	67582849	67582850	chr17:67582850:C:G	rs144867998	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	67611905	67611906	chr17:67611906:A:G	rs11079698	A	G	A	Hoxc9_MA0485.1	2	1	-	12.147396401432225	13.524414878593449	GGTCATAAATCAC
chr17	67672753	67672754	chr17:67672754:A:G	rs149183625	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr17	67818265	67818266	chr17:67818266:C:G	rs3936134	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	67902692	67902693	chr17:67902693:G:A	rs7216064	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr17	68036551	68036552	chr17:68036552:T:C	rs144726285	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	68054794	68054795	chr17:68054795:C:T	rs62084711	C	T	N	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	68054795	68054796	chr17:68054796:G:A	rs139209234	G	A	g	Hoxc9_MA0485.1	12	1	-	7.951622000204808	7.697625046440257	GGCAATGAATTAC
chr17	68351757	68351758	chr17:68351758:A:G	rs76945033	A	G	A	Hoxc9_MA0485.1	4	1	+	9.609276497674877	8.441512783683294	AGCAATAAATTAA
chr17	68393402	68393403	chr17:68393403:C:T	rs8064339	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr17	68437157	68437158	chr17:68437158:A:T	rs8072338	A	T	t	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	68514103	68514104	chr17:68514104:A:G	rs76657672	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr17	68532636	68532637	chr17:68532637:C:G	rs6958	C	G	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	68582308	68582309	chr17:68582309:C:T	chr17:68582309:C:T	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr17	68677096	68677097	chr17:68677097:T:G	rs2278445	T	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr17	68685535	68685536	chr17:68685536:G:T	rs80058980	G	T	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	68821274	68821275	chr17:68821275:T:C	rs12451146	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	68840378	68840379	chr17:68840379:C:T	rs1550646	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	68851051	68851052	chr17:68851052:T:C	rs1443262	T	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr17	68908738	68908739	chr17:68908739:T:G	rs73998576	T	G	.	Hoxc9_MA0485.1	5	1	+	9.201310770336299	2.3027677946167047	GGTTATAAATTAT
chr17	68981195	68981196	chr17:68981196:A:C	rs76321556	A	C	a	Hoxc9_MA0485.1	20	0	-	0	0	.
chr17	69032118	69032119	chr17:69032119:T:C	rs2302291	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	69116314	69116315	chr17:69116315:C:G	rs5025273	C	G	C	Hoxc9_MA0485.1	1	1	+	7.877219804552811	9.016180285884486	ACATGTAAATCAC
chr17	69495928	69495929	chr17:69495929:G:C	rs66613474	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	69502102	69502103	chr17:69502103:A:G	rs117986291	A	G	A	Hoxc9_MA0485.1	3	1	-	8.444941487579385	9.333194260602008	ATCTATAAATCTG
chr17	69531484	69531485	chr17:69531485:T:C	rs2715833	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr17	69637030	69637031	chr17:69637031:G:A	rs2009910	G	A	A	Hoxc9_MA0485.1	2	1	-	8.41529324214299	7.038274764981767	GACTATAAATTTC
chr17	69898812	69898813	chr17:69898813:G:T	rs179925	G	T	T	Hoxc9_MA0485.1	1	1	+	7.516307649266061	5.433547328689523	TGCTGTAAATCCA
chr17	69968682	69968683	chr17:69968683:T:G	rs9907170	T	G	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	70091906	70091907	chr17:70091907:G:C	rs6501366	G	C	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr17	70292465	70292466	chr17:70292466:G:A	rs77358052	G	A	.	Hoxc9_MA0485.1	30	0	+	0	0	.
chr17	70365952	70365953	chr17:70365953:T:C	rs3848453	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	70390196	70390197	chr17:70390197:A:G	rs8065569	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr17	70420855	70420856	chr17:70420856:G:A	rs11654179	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	70739345	70739346	chr17:70739346:C:T	rs117644133	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	71072707	71072708	chr17:71072708:A:G	rs7208880	A	G	G	Hoxc9_MA0485.1	5	1	-	9.333961388893734	4.84865002625525	TACCATAAATCTG
chr17	71145569	71145570	chr17:71145570:C:T	rs9907587	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	71410220	71410221	chr17:71410221:T:G	rs7226071	T	G	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	71440367	71440368	chr17:71440368:G:C	rs11651604	G	C	G	Hoxc9_MA0485.1	12	1	+	6.925726676279465	7.6437824551943425	GGCCATAAAACCG
chr17	71454057	71454058	chr17:71454058:G:A	rs4793347	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	71461079	71461080	chr17:71461080:G:A	rs552717422	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr17	71516309	71516310	chr17:71516310:T:C	rs4793356	T	C	T	Hoxc9_MA0485.1	8	1	-	8.421001736882836	1.5190432267478777	TATCATAAATCTT
chr17	71793194	71793195	chr17:71793195:A:G	rs144243349	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr17	72077706	72077707	chr17:72077707:T:C	rs9913245	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr17	72451543	72451544	chr17:72451544:A:G	rs17827102	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	72525811	72525812	chr17:72525812:A:T	rs8079146	A	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	72617469	72617470	chr17:72617470:C:G	rs16977299	C	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	72623207	72623208	chr17:72623208:G:A	rs116956401	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr17	72853731	72853732	chr17:72853732:C:T	rs7224978	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr17	72900725	72900726	chr17:72900726:T:C	rs8073036	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr17	72900735	72900736	chr17:72900736:T:C	rs72847965	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr17	73089351	73089352	chr17:73089352:C:A	rs9898137	C	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	73107260	73107261	chr17:73107261:G:A	rs139948122	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr17	73132136	73132137	chr17:73132137:C:T	rs75938618	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr17	73157584	73157585	chr17:73157585:C:G	rs4969076	C	G	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	73230294	73230295	chr17:73230295:A:G	rs9900024	A	G	A	Hoxc9_MA0485.1	4	1	+	7.815516276200582	6.647752562208997	GTCAATCAATCAG
chr17	73241952	73241953	chr17:73241953:T:G	rs77289165	T	G	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	73303911	73303912	chr17:73303912:T:C	rs138064569	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr17	73324160	73324161	chr17:73324161:A:G	rs7216248	A	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr17	73452678	73452679	chr17:73452679:T:C	rs11867629	T	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr17	73525425	73525426	chr17:73525426:C:A	rs1564732	C	A	C	Hoxc9_MA0485.1	2	1	+	8.582648057055819	6.663245084652066	GACAATAAATTAA
chr17	73586457	73586458	chr17:73586458:G:A	rs78725178	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr17	73703650	73703651	chr17:73703651:T:C	rs16977747	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr17	73786061	73786062	chr17:73786062:A:G	rs910279055	A	G	A	Hoxc9_MA0485.1	5	1	-	9.265693375809168	4.780382013170679	CTCTATAAATCAC
chr17	73901619	73901620	chr17:73901620:T:C	rs4789591	T	C	C	Hoxc9_MA0485.1	4	1	-	8.641407558427671	7.473643844436087	TGCCATAAAACAC
chr17	73940011	73940012	chr17:73940012:G:A	rs11659041	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr17	73967813	73967814	chr17:73967814:A:C	rs9902475	A	C	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	73970131	73970132	chr17:73970132:G:A	rs1870241	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr17	74110942	74110943	chr17:74110943:C:T	rs12937159	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	74122477	74122478	chr17:74122478:G:A	rs78579502	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	74197046	74197047	chr17:74197047:A:T	rs79807021	A	T	A	Hoxc9_MA0485.1	1	1	-	11.441654558016912	11.964971304683388	GTCCATAAATCAC
chr17	74240093	74240094	chr17:74240094:G:A	rs28609526	G	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr17	74346909	74346910	chr17:74346910:G:A	rs9783802	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	74538863	74538864	chr17:74538864:G:A	rs112711767	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr17	74605063	74605064	chr17:74605064:G:A	rs72847168	G	A	G	Hoxc9_MA0485.1	12	1	+	6.660634977044754	6.534954620211284	GGACATCAATCCG
chr17	74635750	74635751	chr17:74635751:T:C	rs543818	T	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr17	74776975	74776976	chr17:74776976:A:C	rs34986164	A	C	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	74777988	74777989	chr17:74777989:T:C	rs12452204	T	C	T	Hoxc9_MA0485.1	7	1	-	8.762251962957258	1.8580228937516783	AGCTGTCAATCAC
chr17	74914054	74914055	chr17:74914055:G:C	rs113611373	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr17	74994361	74994362	chr17:74994362:G:C	rs73995710	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	75007099	75007100	chr17:75007100:C:T	rs902723	C	T	T	Hoxc9_MA0485.1	11	1	+	6.356909483791172	7.55230995348123	TGCCGTCAATCCG
chr17	75181600	75181601	chr17:75181601:T:A	rs10401035	T	A	T	Hoxc9_MA0485.1	11	1	+	8.996079442864545	9.853668828073568	AACAATAAATCTA
chr17	75263129	75263130	chr17:75263130:C:A	rs115316560	C	A	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr17	75323725	75323726	chr17:75323726:C:T	rs55652331	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr17	75404840	75404841	chr17:75404841:A:G	rs780397627	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	75514991	75514992	chr17:75514992:T:G	rs35643020	T	G	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr17	75623839	75623840	chr17:75623840:G:A	rs820186	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr17	75780294	75780295	chr17:75780295:C:T	rs528960313	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr17	75811244	75811245	chr17:75811245:G:T	rs55976319	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr17	75827059	75827060	chr17:75827060:G:A	rs79295100	G	A	A	Hoxc9_MA0485.1	0	1	+	6.625871902873855	6.093056769582852	GGCCAAAAATCAC
chr17	75827066	75827067	chr17:75827067:A:T	rs77675542	A	T	A	Hoxc9_MA0485.1	7	1	+	6.625871902873855	1.4300206939572802	GGCCAAAAATCAC
chr17	75976296	75976297	chr17:75976297:C:G	rs73357532	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	76000463	76000464	chr17:76000464:G:A	rs62624498	G	A	G	Hoxc9_MA0485.1	12	1	+	9.698004493113736	9.572324136280265	TGCCATAAATCCG
chr17	76000477	76000478	chr17:76000478:A:G	rs115295379	A	G	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	76215978	76215979	chr17:76215979:G:A	rs72868733	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	76256857	76256858	chr17:76256858:C:G	rs8067923	C	G	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr17	76357457	76357458	chr17:76357458:C:G	rs75001897	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr17	76479962	76479963	chr17:76479963:G:C	rs3826287	G	C	G	Hoxc9_MA0485.1	10	1	-	10.110474957957262	5.309404150209985	GGGCATAAATCAG
chr17	76565236	76565237	chr17:76565237:G:A	rs7353	G	A	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr17	76565239	76565240	chr17:76565240:T:C	rs8067372	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	76730688	76730689	chr17:76730689:C:T	rs12936775	C	T	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr17	76789713	76789714	chr17:76789714:C:T	rs78017205	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	76872356	76872357	chr17:76872357:C:T	chr17:76872357:C:T	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr17	76892915	76892916	chr17:76892916:C:T	rs679148	C	T	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	76998513	76998514	chr17:76998514:G:T	rs73370606	G	T	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr17	77028092	77028093	chr17:77028093:T:C	rs35635072	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	77088541	77088542	chr17:77088542:G:A	rs560654472	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr17	77120090	77120091	chr17:77120091:C:T	rs67439757	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	77129929	77129930	chr17:77129930:C:T	rs142595328	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr17	77208804	77208805	chr17:77208805:T:C	rs8078674	T	C	T	Hoxc9_MA0485.1	7	1	-	8.132614195404857	1.2283851261992784	TAACATAAATCTC
chr17	77233627	77233628	chr17:77233628:A:G	rs12150634	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr17	77233660	77233661	chr17:77233661:G:C	rs12150257	G	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	77235525	77235526	chr17:77235526:T:C	rs139917840	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr17	77242712	77242713	chr17:77242713:G:A	rs117103440	G	A	G	Hoxc9_MA0485.1	11	1	+	7.440105865102404	11.852639263970774	ACCCATAAATCGC
chr17	77271558	77271559	chr17:77271559:A:G	rs185087291	A	G	A	Hoxc9_MA0485.1	4	1	+	8.015837605980492	6.848073891988908	CACCATAAATTTC
chr17	77309796	77309797	chr17:77309797:T:C	rs67186777	T	C	C	Hoxc9_MA0485.1	5	1	+	7.585002625361732	3.099691262723246	GGTAATAAAACAC
chr17	77472119	77472120	chr17:77472120:C:T	rs771672504	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr17	77593075	77593076	chr17:77593076:G:A	rs370852971	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr17	77605289	77605290	chr17:77605290:A:G	rs16970334	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	77612930	77612931	chr17:77612931:T:C	rs749456	T	C	C	Hoxc9_MA0485.1	5	1	+	9.998703354252193	5.513391991613708	GGATATAAATCAG
chr17	77619424	77619425	chr17:77619425:G:A	rs7215702	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr17	77639247	77639248	chr17:77639248:G:T	rs11077920	G	T	G	Hoxc9_MA0485.1	3	1	-	6.517816284781193	5.783065077210725	GGACATGAATCCC
chr17	77657084	77657085	chr17:77657085:T:C	rs73377152	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr17	77660815	77660816	chr17:77660816:C:T	rs9898803	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr17	77682351	77682352	chr17:77682352:T:A	chr17:77682352:T:A	T	A	T	Hoxc9_MA0485.1	3	1	+	8.784398057705292	8.937899623157447	GGCTGTAAATAAC
chr17	77687856	77687857	chr17:77687857:T:C	rs56186085	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr17	77687870	77687871	chr17:77687871:A:G	rs8070344	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr17	77793621	77793622	chr17:77793622:C:T	rs74000917	C	T	C	Hoxc9_MA0485.1	10	1	+	9.208878326000379	7.405042421691628	AGCCATTAATCAT
chr17	77818495	77818496	chr17:77818496:C:G	rs1865987	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	77893776	77893777	chr17:77893777:C:T	rs184689393	C	T	C	Hoxc9_MA0485.1	12	1	+	7.464487358377176	7.210490404612625	GTCCATCAATTAC
chr17	77893784	77893785	chr17:77893785:C:T	rs748358884	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	77963632	77963633	chr17:77963633:T:C	chr17:77963633:T:C	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr17	78247650	78247651	chr17:78247651:T:G	rs72901751	T	G	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr17	78263307	78263308	chr17:78263308:G:A	rs79141669	G	A	G	Hoxc9_MA0485.1	0	1	-	7.6501912139723265	7.882534871491694	CGCAGTAAATAAC
chr17	78276799	78276800	chr17:78276800:G:A	rs137968754	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr17	78375124	78375125	chr17:78375125:C:G	rs142568651	C	G	C	Hoxc9_MA0485.1	2	1	+	7.0749652627060495	4.379081120984738	TGCCGTCAATCCC
chr17	78386097	78386098	chr17:78386098:C:T	rs62080360	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr17	78386124	78386125	chr17:78386125:C:A	rs76129595	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr17	78386133	78386134	chr17:78386134:T:G	rs370773356	T	G	g	Hoxc9_MA0485.1	31	0	+	0	0	.
chr17	78409755	78409756	chr17:78409756:T:C	rs4969187	T	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr17	78510892	78510893	chr17:78510893:G:A	rs671972	G	A	.	Hoxc9_MA0485.1	28	0	+	0	0	.
chr17	78534191	78534192	chr17:78534192:G:A	rs9914981	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	78598255	78598256	chr17:78598256:G:T	rs4969153	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	78598957	78598958	chr17:78598958:G:A	rs11651198	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr17	78738783	78738784	chr17:78738784:T:C	rs74682389	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr17	78820116	78820117	chr17:78820117:G:A	rs7222131	G	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	78905382	78905383	chr17:78905383:G:A	rs12600817	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr17	78934417	78934418	chr17:78934418:G:A	rs114433259	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	79189361	79189362	chr17:79189362:T:C	rs1380797	T	C	C	Hoxc9_MA0485.1	4	1	-	8.433363654948591	7.26559994095701	TCCCATAAATCCA
chr17	79277536	79277537	chr17:79277537:A:G	rs898533	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	79315072	79315073	chr17:79315073:C:T	rs78346204	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	79520611	79520612	chr17:79520612:T:C	rs1021725448	T	C	T	Hoxc9_MA0485.1	11	1	-	8.076287440652177	3.6637540417838075	GGACATTAATCAC
chr17	79520640	79520641	chr17:79520641:A:G	rs1035717814	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr17	79663796	79663797	chr17:79663797:G:A	rs1507710	G	A	a	Hoxc9_MA0485.1	18	0	+	0	0	.
chr17	79852942	79852943	chr17:79852943:T:C	rs8067501	T	C	t	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr17	79954217	79954218	chr17:79954218:C:G	rs7221608	C	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	79978334	79978335	chr17:79978335:G:A	rs1468911446	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr17	80054615	80054616	chr17:80054616:A:G	rs9891814	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr17	80126355	80126356	chr17:80126356:T:A	rs4889825	T	A	t	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	80138077	80138078	chr17:80138078:T:C	rs2361710	T	C	C	Hoxc9_MA0485.1	4	1	-	9.705911018775591	8.538147304784008	TGACATAAATCAA
chr17	80284833	80284834	chr17:80284834:T:C	rs142657947	T	C	T	Hoxc9_MA0485.1	8	1	-	7.387633100679685	0.4856745905447259	AGGAATCAATCAC
chr17	80307287	80307288	chr17:80307288:G:T	rs61087724	G	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr17	80496600	80496601	chr17:80496601:A:G	rs58366017	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	80586106	80586107	chr17:80586107:C:A	rs12944929	C	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr17	80586107	80586108	chr17:80586108:G:A	rs7215020	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr17	80739798	80739799	chr17:80739799:C:T	rs62067926	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr17	80740992	80740993	chr17:80740993:C:T	rs12947784	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr17	80815935	80815936	chr17:80815936:A:G	rs2589131	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr17	80861363	80861364	chr17:80861364:C:T	rs8078605	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr17	81094598	81094599	chr17:81094599:T:C	rs555446849	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr17	81094607	81094608	chr17:81094608:C:T	rs34052838	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr17	81310916	81310917	chr17:81310917:A:C	rs540234386	A	C	A	Hoxc9_MA0485.1	3	1	+	10.14209163096588	10.876842838536348	GGCAATAAATTAA
chr17	81310937	81310938	chr17:81310938:A:G	rs7208247	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr17	81343286	81343287	chr17:81343287:G:C	rs549932733	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr17	81343953	81343954	chr17:81343954:C:T	rs80147643	C	T	C	Hoxc9_MA0485.1	2	1	+	10.389326140559486	9.012307663398264	GACCATAAATCTG
chr17	81490516	81490517	chr17:81490517:A:G	rs11150789	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr17	81664293	81664294	chr17:81664294:G:A	rs62080203	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr17	81664296	81664297	chr17:81664297:G:C	rs56148948	G	C	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr17	81858023	81858024	chr17:81858024:C:T	rs3786150	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr17	81867959	81867960	chr17:81867960:C:T	chr17:81867960:C:T	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	81867960	81867961	chr17:81867961:G:A	rs36092850	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr17	81988664	81988665	chr17:81988665:A:G	rs9890434	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr17	82018705	82018706	chr17:82018706:G:A	rs72861729	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr17	82343430	82343431	chr17:82343431:C:T	rs8079374	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr17	82419529	82419530	chr17:82419530:T:C	rs4074069	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr17	82419575	82419576	chr17:82419576:T:C	rs117071519	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr17	82463233	82463234	chr17:82463234:C:T	rs72859120	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr17	82545284	82545285	chr17:82545285:G:A	rs72861060	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr17	82551853	82551854	chr17:82551854:A:G	rs138197827	A	G	a	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	82603447	82603448	chr17:82603448:T:C	rs1051855	T	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr17	82603448	82603449	chr17:82603449:G:A	rs3794714	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr17	82794206	82794207	chr17:82794207:C:T	rs557399787	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr17	82794255	82794256	chr17:82794256:G:T	rs75596709	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr17	82885786	82885787	chr17:82885787:T:C	rs56405605	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr17	83127170	83127171	chr17:83127171:G:A	rs1026561648	G	A	G	Hoxc9_MA0485.1	4	1	+	7.367666466753375	8.535430180744957	AACCGTAAATCCA
chr17	83201968	83201969	chr17:83201969:C:G	rs542187100	C	G	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr18	307361	307362	chr18:307362:C:T	rs72857556	C	T	c	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr18	339518	339519	chr18:339519:T:G	rs1977930	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	518840	518841	chr18:518841:C:T	rs66614174	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	616581	616582	chr18:616582:T:C	rs479141	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr18	700429	700430	chr18:700430:C:T	rs764133538	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr18	849176	849177	chr18:849177:A:C	rs1291183	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr18	944531	944532	chr18:944532:C:T	rs16953183	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr18	1017585	1017586	chr18:1017586:G:A	rs789040	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	1350965	1350966	chr18:1350966:C:A	rs1435484	C	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	1533689	1533690	chr18:1533690:C:T	rs4570951	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	1976682	1976683	chr18:1976683:C:G	rs6417008	C	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr18	2105247	2105248	chr18:2105248:G:A	rs12967693	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	2256903	2256904	chr18:2256904:T:C	rs500227	T	C	C	Hoxc9_MA0485.1	0	1	+	7.950608577163369	7.718264919644002	TCCCATAAATTTG
chr18	2606828	2606829	chr18:2606829:T:G	rs4299227	T	G	G	Hoxc9_MA0485.1	4	1	-	9.839815578612894	4.7018888973632365	AACAATAAATCTC
chr18	2642160	2642161	chr18:2642161:T:G	rs7237910	T	G	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr18	2912413	2912414	chr18:2912414:A:G	rs620635	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr18	3198477	3198478	chr18:3198478:C:T	rs72861627	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr18	3319916	3319917	chr18:3319917:C:T	rs1662813	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	3383636	3383637	chr18:3383637:C:G	rs182543974	C	G	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr18	3391984	3391985	chr18:3391985:C:T	rs11663103	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr18	3452532	3452533	chr18:3452533:C:T	rs911751931	C	T	C	Hoxc9_MA0485.1	0	1	-	7.269455543193366	6.736640409902363	GGCCGTGAATCCC
chr18	3452548	3452549	chr18:3452549:T:C	rs113495176	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr18	3587640	3587641	chr18:3587641:C:T	rs584885	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr18	3655392	3655393	chr18:3655393:A:G	rs1675240	A	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr18	4449508	4449509	chr18:4449509:G:A	rs17365802	G	A	G	Hoxc9_MA0485.1	3	1	-	7.098367542524891	6.210114769502267	GGCCATAACTCTG
chr18	4453497	4453498	chr18:4453498:T:C	rs9951521	T	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr18	5311822	5311823	chr18:5311823:A:C	rs73946229	A	C	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	5471765	5471766	chr18:5471766:C:T	rs9950450	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	5520214	5520215	chr18:5520215:T:C	rs1785398	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr18	5702774	5702775	chr18:5702775:C:T	rs2140947	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr18	5710346	5710347	chr18:5710347:C:G	rs72871861	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr18	5733654	5733655	chr18:5733655:C:T	rs9961444	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr18	5841664	5841665	chr18:5841665:C:T	rs55991837	C	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr18	5841696	5841697	chr18:5841697:T:A	rs8087368	T	A	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	6505597	6505598	chr18:6505598:G:A	rs11873891	G	A	A	Hoxc9_MA0485.1	12	1	-	8.408031315892522	8.15403436212797	TGTCATAAATAAC
chr18	6692146	6692147	chr18:6692147:C:T	rs34513266	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	6735467	6735468	chr18:6735468:C:T	rs12150787	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr18	6913975	6913976	chr18:6913976:G:A	rs1431389	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	6922019	6922020	chr18:6922020:C:A	rs9952054	C	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr18	6986676	6986677	chr18:6986677:C:T	rs16950967	C	T	c	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr18	7261345	7261346	chr18:7261346:A:G	rs8087671	A	G	A	Hoxc9_MA0485.1	9	1	-	9.949861729068344	3.061635914694714	AGCAATAAATCCT
chr18	7389229	7389230	chr18:7389230:G:C	rs9946160	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr18	7418164	7418165	chr18:7418165:C:T	rs58234919	C	T	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	7688827	7688828	chr18:7688828:C:T	rs6506525	C	T	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr18	7767337	7767338	chr18:7767338:G:A	rs1446081	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	7921287	7921288	chr18:7921288:G:T	rs62090936	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	7954027	7954028	chr18:7954028:G:T	rs36093720	G	T	T	Hoxc9_MA0485.1	3	1	-	8.683232942477996	7.948481734907527	CGGCATAAATCTC
chr18	8236113	8236114	chr18:8236114:G:A	rs6506562	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr18	8374912	8374913	chr18:8374913:G:A	rs8089060	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr18	8426649	8426650	chr18:8426650:C:T	rs675417	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr18	8656599	8656600	chr18:8656600:T:C	rs321651	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	8767316	8767317	chr18:8767317:A:G	rs189265748	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	8767328	8767329	chr18:8767329:G:T	rs72936071	G	T	G	Hoxc9_MA0485.1	10	1	-	10.132292852586605	7.448292518712656	TTCCATAAATCAT
chr18	8865809	8865810	chr18:8865810:G:A	rs927084650	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	8869781	8869782	chr18:8869782:C:T	rs1481042	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr18	8942444	8942445	chr18:8942445:A:T	rs36028116	A	T	A	Hoxc9_MA0485.1	0	1	-	9.020076204817263	9.542625823192015	TCCTGTAAATCAT
chr18	9000654	9000655	chr18:9000655:A:C	rs117373338	A	C	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr18	9102313	9102314	chr18:9102314:A:C	rs1435712967	A	C	A	Hoxc9_MA0485.1	3	1	-	8.67742378350207	4.049280084539002	CACTATAAATCTT
chr18	9102330	9102331	chr18:9102331:C:A	rs1156043	C	A	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr18	9103268	9103269	chr18:9103269:A:G	rs55672869	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr18	9107420	9107421	chr18:9107421:A:G	rs116998578	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr18	9626466	9626467	chr18:9626467:C:T	rs7227499	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	9733119	9733120	chr18:9733120:A:G	rs1318486	A	G	G	Hoxc9_MA0485.1	4	1	+	10.469211014931497	9.301447300939914	TGCTATAAATCTT
chr18	9758022	9758023	chr18:9758023:G:A	rs78258961	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr18	9811023	9811024	chr18:9811024:G:T	rs2299842	G	T	g	Hoxc9_MA0485.1	24	0	-	0	0	.
chr18	9903037	9903038	chr18:9903038:G:A	rs77742774	G	A	g	Hoxc9_MA0485.1	0	1	+	8.195367380206616	7.662552246915616	GGCCACAAATCAA
chr18	9903067	9903068	chr18:9903068:C:T	rs185081619	C	T	c	Hoxc9_MA0485.1	30	0	+	0	0	.
chr18	10035905	10035906	chr18:10035906:T:C	rs626625	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	10041475	10041476	chr18:10041476:G:A	chr18:10041476:G:A	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr18	10058693	10058694	chr18:10058694:T:A	rs75109035	T	A	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr18	10072278	10072279	chr18:10072279:G:A	rs582208	G	A	A	Hoxc9_MA0485.1	4	1	+	7.382112959373483	8.549876673365068	TGCTGTCAATCTC
chr18	10457172	10457173	chr18:10457173:G:A	rs56124004	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr18	10457215	10457216	chr18:10457216:G:C	rs11662092	G	C	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	10461159	10461160	chr18:10461160:A:G	rs957772	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr18	10465351	10465352	chr18:10465352:A:G	rs567771	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	10660239	10660240	chr18:10660240:T:C	rs78279340	T	C	T	Hoxc9_MA0485.1	4	1	-	9.25875624522408	8.090992531232494	AAACATAAATCAT
chr18	10689154	10689155	chr18:10689155:C:T	rs59222061	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	10740771	10740772	chr18:10740772:C:T	rs35786221	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr18	10750460	10750461	chr18:10750461:C:T	rs564693075	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr18	10839842	10839843	chr18:10839843:G:A	rs1485776	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr18	10843173	10843174	chr18:10843174:T:C	rs7232017	T	C	T	Hoxc9_MA0485.1	10	1	+	9.086726879300127	10.890562783608878	TGCAATAAATTAA
chr18	10928721	10928722	chr18:10928722:C:T	rs264262	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr18	11008836	11008837	chr18:11008837:G:A	rs2660280	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr18	11096618	11096619	chr18:11096619:C:T	rs11080490	C	T	T	Hoxc9_MA0485.1	1	1	-	11.415954581178546	9.856511007268486	AGCCATAAATCTG
chr18	11320782	11320783	chr18:11320783:T:C	rs459799	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	11339603	11339604	chr18:11339604:G:A	rs116418119	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	11383216	11383217	chr18:11383217:T:A	rs11665453	T	A	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr18	11500779	11500780	chr18:11500780:A:G	chr18:11500780:A:G	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr18	11655568	11655569	chr18:11655569:C:T	rs80147836	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	11857634	11857635	chr18:11857635:A:G	rs73409587	A	G	G	Hoxc9_MA0485.1	11	1	+	7.643057128988846	3.2305237301204768	CACCATGAATCAC
chr18	11925996	11925997	chr18:11925997:C:A	rs12970953	C	A	-	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	12318027	12318028	chr18:12318028:C:G	rs4796960	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr18	12318059	12318060	chr18:12318060:A:G	rs58136410	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	12318066	12318067	chr18:12318067:C:T	rs559836625	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr18	12415571	12415572	chr18:12415572:A:G	rs11662659	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	12456559	12456560	chr18:12456560:G:A	rs522631	G	A	G	Hoxc9_MA0485.1	0	1	-	8.423611263719264	8.655954921238632	CGTAATAAATCTA
chr18	12604771	12604772	chr18:12604772:C:T	rs73407543	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr18	12776056	12776057	chr18:12776057:A:G	rs115366763	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr18	12776061	12776062	chr18:12776062:T:C	rs114837291	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr18	12776070	12776071	chr18:12776071:G:A	rs55850802	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr18	13029575	13029576	chr18:13029576:A:G	rs16940054	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	13246486	13246487	chr18:13246487:G:A	rs4797750	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr18	13247880	13247881	chr18:13247881:T:C	rs4797753	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr18	13316130	13316131	chr18:13316131:C:G	rs2867876	C	G	C	Hoxc9_MA0485.1	11	1	+	8.291037850346266	5.931494306376979	AGCCATAAATTCA
chr18	13388145	13388146	chr18:13388146:C:T	rs77940153	C	T	C	Hoxc9_MA0485.1	0	1	-	8.14935286651189	7.616537733220888	GGCAATTAATCTT
chr18	13428038	13428039	chr18:13428039:T:C	rs9959699	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	13456818	13456819	chr18:13456819:T:G	rs12967917	T	G	T	Hoxc9_MA0485.1	12	1	+	7.997434273505186	7.533375448354859	CTCAGTAAATCAT
chr18	13500895	13500896	chr18:13500896:T:C	rs753376679	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr18	13818340	13818341	chr18:13818341:C:G	rs1284068	C	G	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	14415957	14415958	chr18:14415958:T:C	rs8089809	T	C	.	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	14415972	14415973	chr18:14415973:A:G	rs8088682	A	G	.	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr18	14827250	14827251	chr18:14827251:G:A	rs537587503	G	A	g	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	14917873	14917874	chr18:14917874:A:T	rs12455763	A	T	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr18	21314568	21314569	chr18:21314569:T:C	rs8099122	T	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr18	21346161	21346162	chr18:21346162:C:T	rs76570014	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr18	21942477	21942478	chr18:21942478:T:C	rs141554213	T	C	T	Hoxc9_MA0485.1	8	1	-	8.826840205671674	1.924881695536715	AGTAATAAATCCC
chr18	21993437	21993438	chr18:21993438:T:C	rs34837407	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr18	22084777	22084778	chr18:22084778:C:G	rs1017955283	C	G	C	Hoxc9_MA0485.1	1	1	+	9.27709979069694	10.416060272028615	TCCCATAAATCCC
chr18	22106659	22106660	chr18:22106660:G:A	rs76265129	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr18	22136624	22136625	chr18:22136625:G:T	rs566304119	G	T	G	Hoxc9_MA0485.1	1	1	+	7.540260434766821	5.457500114190283	GGCAGTAAAACAT
chr18	22684042	22684043	chr18:22684043:T:A	rs556133574	T	A	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	22734577	22734578	chr18:22734578:C:T	rs299232	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	22774840	22774841	chr18:22774841:C:T	rs79970343	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr18	23116336	23116337	chr18:23116337:C:T	rs56394522	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	23262496	23262497	chr18:23262497:G:C	rs12373256	G	C	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr18	23263885	23263886	chr18:23263886:C:A	rs138422773	C	A	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	23486251	23486252	chr18:23486252:G:A	rs73390241	G	A	G	Hoxc9_MA0485.1	0	1	+	7.998783376030302	7.4659682427393	GCCCTTAAATCAG
chr18	23568502	23568503	chr18:23568503:A:T	rs74552655	A	T	A	Hoxc9_MA0485.1	9	1	-	9.28819574545772	5.460553176957695	TGTCATAAATTAC
chr18	23775619	23775620	chr18:23775620:C:T	rs9947098	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr18	23849606	23849607	chr18:23849607:G:A	rs8086359	G	A	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr18	23964013	23964014	chr18:23964014:G:A	rs377326176	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	23978658	23978659	chr18:23978659:C:A	rs73400392	C	A	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr18	23981535	23981536	chr18:23981536:C:T	rs12956330	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	23981572	23981573	chr18:23981573:C:T	rs144043327	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	24069385	24069386	chr18:24069386:G:C	chr18:24069386:G:C	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	24191281	24191282	chr18:24191282:C:T	rs6508239	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr18	24357056	24357057	chr18:24357057:T:C	rs1030110	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr18	24444240	24444241	chr18:24444241:T:G	rs17203265	T	G	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr18	24503325	24503326	chr18:24503326:C:T	rs899323975	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	24530922	24530923	chr18:24530923:A:G	rs16940792	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	24535093	24535094	chr18:24535094:C:T	rs78554131	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	24574742	24574743	chr18:24574743:G:C	rs55747633	G	C	g	Hoxc9_MA0485.1	17	0	+	0	0	.
chr18	24596206	24596207	chr18:24596207:G:A	rs115867970	G	A	g	Hoxc9_MA0485.1	13	0	+	0	0	.
chr18	24704703	24704704	chr18:24704704:C:T	rs339939	C	T	T	Hoxc9_MA0485.1	12	1	+	8.150850742932342	7.89685378916779	GGCTACAAATCAC
chr18	25308714	25308715	chr18:25308715:C:G	rs7237416	C	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr18	25570272	25570273	chr18:25570273:C:T	rs2430766	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr18	25825605	25825606	chr18:25825606:G:A	rs1557322	G	A	A	Hoxc9_MA0485.1	0	1	+	9.988590065513725	9.455774932222722	GGCTATAAATTAA
chr18	25825943	25825944	chr18:25825944:G:C	rs16941840	G	C	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr18	26498195	26498196	chr18:26498196:G:A	rs17604918	G	A	g	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	26869055	26869056	chr18:26869056:C:T	rs11662318	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr18	26909937	26909938	chr18:26909938:G:A	rs34688904	G	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	26920651	26920652	chr18:26920652:T:C	rs232320	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	27297756	27297757	chr18:27297757:G:A	rs1648796	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	27429546	27429547	chr18:27429547:A:G	rs550610109	A	G	A	Hoxc9_MA0485.1	5	1	-	8.21155182056138	3.7262404579228954	AGCTATGAATCTC
chr18	27569620	27569621	chr18:27569621:T:G	rs8092333	T	G	T	Hoxc9_MA0485.1	7	1	-	10.390368922864283	3.486139853658707	CGCAATAAATCTT
chr18	27569634	27569635	chr18:27569635:G:C	rs8087249	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	28332734	28332735	chr18:28332735:A:G	rs4800862	A	G	A	Hoxc9_MA0485.1	12	1	-	9.441815446020714	9.695812399785266	GTCTATAAATCTT
chr18	28584660	28584661	chr18:28584661:G:A	rs16944974	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr18	28689844	28689845	chr18:28689845:A:G	rs17687475	A	G	A	Hoxc9_MA0485.1	7	1	+	8.001524050116183	1.0972949809106034	TACAATCAATCAC
chr18	28809342	28809343	chr18:28809343:A:G	rs12962306	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	29502246	29502247	chr18:29502247:G:A	rs7240074	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr18	30007491	30007492	chr18:30007492:A:G	rs4436850	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	30088298	30088299	chr18:30088299:T:C	rs57470489	T	C	T	Hoxc9_MA0485.1	11	1	-	9.34658030194081	4.934046903072441	GTTCATAAATCAG
chr18	30245475	30245476	chr18:30245476:T:C	rs4452027	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr18	31131555	31131556	chr18:31131556:C:T	rs1789072	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	31197920	31197921	chr18:31197921:C:T	rs758220803	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr18	31207058	31207059	chr18:31207059:G:A	rs180974102	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr18	31207065	31207066	chr18:31207066:G:A	rs113912808	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr18	31207074	31207075	chr18:31207075:G:A	rs1040989344	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr18	31494143	31494144	chr18:31494144:C:T	rs72938857	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	31551260	31551261	chr18:31551261:A:G	rs1791231	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	31589861	31589862	chr18:31589862:A:G	rs3764479	A	G	A	Hoxc9_MA0485.1	12	1	-	9.347959385296853	9.601956339061406	GGCTATGAATCAT
chr18	31590745	31590746	chr18:31590746:G:A	rs3764477	G	A	g	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	31590766	31590767	chr18:31590767:C:T	rs58616646	C	T	T	Hoxc9_MA0485.1	2	1	+	7.985705390817954	6.60868691365673	TGCTGTCAATCAT
chr18	32450558	32450559	chr18:32450559:T:C	rs10502600	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	32596237	32596238	chr18:32596238:C:T	rs117718097	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	32672551	32672552	chr18:32672552:A:G	rs1846013	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr18	32674502	32674503	chr18:32674503:G:A	rs59903048	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	32921691	32921692	chr18:32921692:A:G	rs116487942	A	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr18	33685446	33685447	chr18:33685447:G:T	rs7241287	G	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	33802521	33802522	chr18:33802522:A:G	rs7235698	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr18	34234852	34234853	chr18:34234853:G:A	rs71363437	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	34359074	34359075	chr18:34359075:A:G	rs4799761	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	34548371	34548372	chr18:34548372:G:A	rs2849484	G	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr18	34707545	34707546	chr18:34707546:C:G	rs151307377	C	G	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr18	35138799	35138800	chr18:35138800:C:A	rs7235907	C	A	C	Hoxc9_MA0485.1	2	1	+	7.645437576373619	5.726034603969864	GCCTGTAAATAAC
chr18	35443784	35443785	chr18:35443785:T:C	rs3894913	T	C	T	Hoxc9_MA0485.1	4	1	-	9.488728406614346	8.320964692622763	GCCCATAAATCCA
chr18	35807940	35807941	chr18:35807941:T:C	rs1942241	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr18	35948302	35948303	chr18:35948303:C:T	rs78798716	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr18	36072539	36072540	chr18:36072540:T:C	rs10153342	T	C	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr18	36108406	36108407	chr18:36108407:A:G	rs3826603	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr18	36350340	36350341	chr18:36350341:T:A	rs9947625	T	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr18	36451470	36451471	chr18:36451471:G:A	rs1398956	G	A	g	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	36579070	36579071	chr18:36579071:G:A	rs111774012	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	36590150	36590151	chr18:36590151:C:T	rs4799425	C	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	36598148	36598149	chr18:36598149:G:C	rs3859358	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr18	36598158	36598159	chr18:36598159:A:G	rs3859359	A	G	A	Hoxc9_MA0485.1	4	1	+	8.922386354068513	7.754622640076929	GTTTATAAATCAT
chr18	36702930	36702931	chr18:36702931:T:C	rs16968198	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	36772543	36772544	chr18:36772544:T:G	rs62083203	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	36868105	36868106	chr18:36868106:T:G	rs55766643	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	36886111	36886112	chr18:36886112:A:C	rs73417109	A	C	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr18	37378546	37378547	chr18:37378547:G:C	rs4799921	G	C	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	37946704	37946705	chr18:37946705:C:G	rs62081358	C	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	37953961	37953962	chr18:37953962:G:A	rs570932371	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr18	37984524	37984525	chr18:37984525:A:G	rs62084364	A	G	A	Hoxc9_MA0485.1	8	1	+	8.43566133998014	1.5337028298451811	GGCCATCAATTTT
chr18	38158243	38158244	chr18:38158244:A:G	rs1385033	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr18	38752523	38752524	chr18:38752524:A:G	rs11665581	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	38894268	38894269	chr18:38894269:G:A	rs6507286	G	A	.	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	39036752	39036753	chr18:39036753:T:A	rs925240	T	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr18	39038017	39038018	chr18:39038018:C:T	rs16971512	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	39414573	39414574	chr18:39414574:A:G	rs8098507	A	G	G	Hoxc9_MA0485.1	8	1	+	10.217527479373361	3.315568969238403	AGCTGTAAATCAG
chr18	39424540	39424541	chr18:39424541:A:C	rs1482969	A	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	39513412	39513413	chr18:39513413:C:T	rs1788931	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	39693423	39693424	chr18:39693424:T:C	rs67375932	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr18	39728596	39728597	chr18:39728597:G:A	rs11082150	G	A	G	Hoxc9_MA0485.1	12	1	-	10.260298671191283	10.00630171742673	ACCAATAAATCTC
chr18	39939182	39939183	chr18:39939183:G:A	rs939352126	G	A	G	Hoxc9_MA0485.1	1	1	+	8.345780592456071	6.78633701854601	TGTAGTAAATCAA
chr18	39992125	39992126	chr18:39992126:A:C	rs8083471	A	C	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr18	40108741	40108742	chr18:40108742:A:C	rs10468943	A	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	40245936	40245937	chr18:40245937:A:G	rs118115427	A	G	A	Hoxc9_MA0485.1	4	1	+	8.830925348954224	7.663161634962641	CACAATAAATCTT
chr18	40245964	40245965	chr18:40245965:G:A	rs78088255	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr18	40360813	40360814	chr18:40360814:A:G	rs936325174	A	G	A	Hoxc9_MA0485.1	3	1	-	10.12018314707793	11.008435920100553	GCTTATAAATCAC
chr18	40612475	40612476	chr18:40612476:G:A	rs67566946	G	A	A	Hoxc9_MA0485.1	0	1	+	6.877775683274888	6.3449605499838855	GACCATGAATCCC
chr18	40612478	40612479	chr18:40612479:C:A	rs72903726	C	A	C	Hoxc9_MA0485.1	3	1	+	6.877775683274888	6.143024475704419	GACCATGAATCCC
chr18	41004402	41004403	chr18:41004403:G:C	rs3850131	G	C	C	Hoxc9_MA0485.1	10	1	-	7.345484442652356	2.544413634905078	CCCCATGAATCAG
chr18	41004733	41004734	chr18:41004734:C:G	rs559716583	C	G	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	41047675	41047676	chr18:41047676:C:T	rs1982444	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr18	41144637	41144638	chr18:41144638:C:T	rs8091668	C	T	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	41870974	41870975	chr18:41870975:A:G	rs35789476	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr18	41870982	41870983	chr18:41870983:G:A	rs187545720	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	41941219	41941220	chr18:41941220:G:A	rs118093774	G	A	g	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	42064282	42064283	chr18:42064283:G:T	rs559231	G	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	42156350	42156351	chr18:42156351:C:T	rs8089873	C	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	43781889	43781890	chr18:43781890:C:T	rs8091815	C	T	C	Hoxc9_MA0485.1	0	1	+	7.997434273505186	8.229777931024552	CTCAGTAAATCAT
chr18	43789439	43789440	chr18:43789440:C:T	rs1046629882	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	43805914	43805915	chr18:43805915:C:T	rs77188745	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	43875950	43875951	chr18:43875951:G:A	rs62103716	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr18	43957356	43957357	chr18:43957357:C:T	rs77149930	C	T	C	Hoxc9_MA0485.1	2	1	+	8.378906635474209	7.001888158312986	AGCAATGAATCAA
chr18	44118038	44118039	chr18:44118039:G:A	rs11082367	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr18	44461097	44461098	chr18:44461098:A:C	rs12606438	A	C	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr18	44461148	44461149	chr18:44461149:C:A	rs41473946	C	A	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr18	44514442	44514443	chr18:44514443:C:T	rs4405635	C	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	44533304	44533305	chr18:44533305:G:T	rs8093196	G	T	G	Hoxc9_MA0485.1	2	1	-	7.507977769127164	5.588574796723408	TGCAATCAATCCC
chr18	44715629	44715630	chr18:44715630:A:G	rs191727453	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	44859920	44859921	chr18:44859921:C:T	rs991014	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr18	44896898	44896899	chr18:44896899:A:G	rs675079	A	G	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	44969512	44969513	chr18:44969513:T:C	rs11082416	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr18	45155731	45155732	chr18:45155732:G:A	rs35220808	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	45385175	45385176	chr18:45385176:C:T	rs192325417	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	45509297	45509298	chr18:45509298:A:C	rs9964390	A	C	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr18	45626656	45626657	chr18:45626657:G:A	rs1045302551	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	45723868	45723869	chr18:45723869:C:T	rs1484878	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	45728923	45728924	chr18:45728924:C:G	rs9967412	C	G	G	Hoxc9_MA0485.1	1	1	+	10.399832277485427	11.538792758817099	ACCAATAAATCAG
chr18	45755933	45755934	chr18:45755934:C:T	rs9966818	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr18	45755956	45755957	chr18:45755957:G:A	rs16978485	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr18	45806439	45806440	chr18:45806440:T:G	rs149134831	T	G	t	Hoxc9_MA0485.1	9	1	+	8.842908617095791	1.954682802722159	AGGAATAAATCAG
chr18	45827834	45827835	chr18:45827835:T:C	rs73953903	T	C	T	Hoxc9_MA0485.1	5	1	+	7.828535808480775	3.3432244458422877	TGCTATGAATCAG
chr18	45834039	45834040	chr18:45834040:A:G	chr18:45834040:A:G	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	45993382	45993383	chr18:45993383:C:T	rs73953950	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	46113994	46113995	chr18:46113995:C:G	rs532666676	C	G	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr18	46350999	46351000	chr18:46351000:C:T	rs8098242	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	46351008	46351009	chr18:46351009:C:T	rs8098249	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	46712703	46712704	chr18:46712704:G:T	rs756032	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr18	47249525	47249526	chr18:47249526:G:A	rs2668771	G	A	A	Hoxc9_MA0485.1	1	1	-	7.670791238759442	6.726991399514576	TCCTATAAATCCG
chr18	47346121	47346122	chr18:47346122:G:T	rs4986187	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr18	47390632	47390633	chr18:47390633:A:G	rs34358806	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr18	47453439	47453440	chr18:47453440:G:A	rs113692456	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr18	47601909	47601910	chr18:47601910:G:A	rs117911202	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr18	47717063	47717064	chr18:47717064:A:G	rs11661072	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr18	47981374	47981375	chr18:47981375:T:C	rs4940158	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr18	48065312	48065313	chr18:48065313:G:A	rs73954682	G	A	A	Hoxc9_MA0485.1	1	1	+	7.610160110119415	6.050716536209355	CGCAATGAATCTC
chr18	48143872	48143873	chr18:48143873:G:A	rs78577771	G	A	G	Hoxc9_MA0485.1	12	1	+	9.865116471756865	9.739436114923395	GGCTATAAATCCG
chr18	48223070	48223071	chr18:48223071:C:A	rs73955664	C	A	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr18	48229605	48229606	chr18:48229606:A:C	rs117109444	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr18	48519961	48519962	chr18:48519962:G:A	rs77782851	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr18	48725582	48725583	chr18:48725583:G:T	rs11661260	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	48828745	48828746	chr18:48828746:C:T	rs9960798	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	48828785	48828786	chr18:48828786:A:G	rs9960719	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr18	48834294	48834295	chr18:48834295:A:G	rs912798943	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr18	48887560	48887561	chr18:48887561:G:A	rs11877294	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr18	48930023	48930024	chr18:48930024:C:T	rs2878890	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr18	49017359	49017360	chr18:49017360:C:G	rs357889	C	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	49017388	49017389	chr18:49017389:G:T	rs114859566	G	T	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr18	49017394	49017395	chr18:49017395:C:T	rs184916955	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr18	49504120	49504121	chr18:49504121:T:C	rs77793890	T	C	T	Hoxc9_MA0485.1	6	1	-	9.304567827362465	6.270362060853043	AGTTGTAAATCAT
chr18	49648308	49648309	chr18:49648309:C:T	rs7227237	C	T	t	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr18	49666341	49666342	chr18:49666342:G:A	rs72919965	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr18	49788504	49788505	chr18:49788505:G:C	rs7243732	G	C	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	49885631	49885632	chr18:49885632:G:T	rs2679730	G	T	T	Hoxc9_MA0485.1	4	1	+	8.820826351522141	6.319974823197129	GGCTGTAAATTAA
chr18	49945921	49945922	chr18:49945922:C:T	rs2954238	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	50159144	50159145	chr18:50159145:C:G	rs17740349	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	50163150	50163151	chr18:50163151:T:A	chr18:50163151:T:A	T	A	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	50373026	50373027	chr18:50373027:C:T	rs9973009	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr18	51121498	51121499	chr18:51121499:T:A	rs7229131	T	A	T	Hoxc9_MA0485.1	8	1	-	8.26814534397673	1.366186833841774	GGCCATAAATCGA
chr18	51121502	51121503	chr18:51121503:T:C	rs7229132	T	C	C	Hoxc9_MA0485.1	4	1	-	8.26814534397673	7.100381629985148	GGCCATAAATCGA
chr18	51124113	51124114	chr18:51124114:G:A	rs4332832	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr18	51149873	51149874	chr18:51149874:C:T	rs4940044	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	51324629	51324630	chr18:51324630:C:T	rs753617	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr18	51346261	51346262	chr18:51346262:C:T	rs755701	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	51722086	51722087	chr18:51722087:C:T	rs8096278	C	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr18	52349758	52349759	chr18:52349759:C:T	rs1443572	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr18	52499865	52499866	chr18:52499866:A:G	rs17828125	A	G	A	Hoxc9_MA0485.1	8	1	+	9.466730557150878	2.564772047015919	CCTCATAAATCAT
chr18	52559727	52559728	chr18:52559728:A:G	rs11082930	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	52569169	52569170	chr18:52569170:T:C	rs11665228	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr18	52597294	52597295	chr18:52597295:G:A	rs16955284	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr18	52679430	52679431	chr18:52679431:G:A	rs17755888	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	52779918	52779919	chr18:52779919:G:T	rs9947241	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr18	52815783	52815784	chr18:52815784:C:A	rs8082829	C	A	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	52850117	52850118	chr18:52850118:G:T	rs112648558	G	T	G	Hoxc9_MA0485.1	10	1	-	8.761800401204322	6.077800067330374	AGAAATAAATCTG
chr18	53423132	53423133	chr18:53423133:A:C	rs13381100	A	C	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr18	53757005	53757006	chr18:53757006:A:G	rs17444197	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	53886172	53886173	chr18:53886173:A:G	rs10853636	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	53886176	53886177	chr18:53886177:T:C	rs924284	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	53946822	53946823	chr18:53946823:A:T	rs4131468	A	T	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr18	53990707	53990708	chr18:53990708:A:G	rs16957645	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr18	54125574	54125575	chr18:54125575:T:C	rs2926334	T	C	c	Hoxc9_MA0485.1	21	0	-	0	0	.
chr18	54153850	54153851	chr18:54153851:G:A	rs12608387	G	A	G	Hoxc9_MA0485.1	4	1	+	7.383267670055617	8.551031384047201	GAGCGTAAATCAG
chr18	54492488	54492489	chr18:54492489:T:C	rs79686933	T	C	T	Hoxc9_MA0485.1	0	1	-	9.486872625474529	10.019687758765532	ACTAATAAATCAT
chr18	54532948	54532949	chr18:54532949:A:T	rs1056806686	A	T	A	Hoxc9_MA0485.1	9	1	-	9.98615964910308	6.1585170806030565	CCCCATAAATCTT
chr18	54727879	54727880	chr18:54727880:C:T	rs9807480	C	T	T	Hoxc9_MA0485.1	1	1	-	8.429205969231953	6.869762395321891	AGCAATAAAACAC
chr18	54787784	54787785	chr18:54787785:G:A	rs140531270	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr18	54790095	54790096	chr18:54790096:G:T	rs192666077	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr18	54790096	54790097	chr18:54790097:G:A	rs185591737	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr18	55083456	55083457	chr18:55083457:T:G	rs11874716	T	G	T	Hoxc9_MA0485.1	7	1	-	8.581779380956826	1.6775503117512498	GCCTATAAATTTT
chr18	55097977	55097978	chr18:55097978:A:C	rs1039644204	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr18	55150198	55150199	chr18:55150199:G:C	rs113396381	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr18	55153375	55153376	chr18:55153376:T:G	rs9953471	T	G	T	Hoxc9_MA0485.1	5	1	+	7.667979319180417	0.7694363434608238	TGCCATAAATGAC
chr18	55458203	55458204	chr18:55458204:G:A	rs2924321	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	55737462	55737463	chr18:55737463:A:G	rs813043	A	G	A	Hoxc9_MA0485.1	8	1	+	11.289807016223202	4.387848506088245	GGTCATAAATCTC
chr18	55776891	55776892	chr18:55776892:C:T	rs12965363	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	55818213	55818214	chr18:55818214:T:C	rs12455831	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr18	56221790	56221791	chr18:56221791:A:C	rs75104423	A	C	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr18	56286616	56286617	chr18:56286617:C:T	rs7236444	C	T	T	Hoxc9_MA0485.1	1	1	-	9.354812335788454	7.795368761878394	GGTAATAAATTAT
chr18	56330964	56330965	chr18:56330965:G:A	rs11662862	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	56330970	56330971	chr18:56330971:T:G	chr18:56330971:T:G	T	G	T	Hoxc9_MA0485.1	2	1	+	10.08956354335892	8.770697878798837	GGTCATAAATTAT
chr18	56651390	56651391	chr18:56651391:A:G	rs1490265234	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr18	56651391	56651392	chr18:56651392:C:G	rs1197495054	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr18	56860243	56860244	chr18:56860244:A:G	rs17830024	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr18	57225024	57225025	chr18:57225025:A:T	rs149574361	A	T	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr18	57434683	57434684	chr18:57434684:G:A	rs3760615	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	57677063	57677064	chr18:57677064:T:C	rs35018152	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr18	57797290	57797291	chr18:57797291:A:G	rs2663849	A	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr18	57994064	57994065	chr18:57994065:C:T	rs9646592	C	T	C	Hoxc9_MA0485.1	12	1	+	8.19052893755517	7.936531983790618	AGCCATAAATGAC
chr18	58009455	58009456	chr18:58009456:A:G	rs17693317	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr18	58048437	58048438	chr18:58048438:A:G	rs4528665	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	58220994	58220995	chr18:58220995:C:G	rs292455	C	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr18	58237539	58237540	chr18:58237540:C:T	rs158861	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	58370616	58370617	chr18:58370617:A:G	rs2075405	A	G	a	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr18	58370655	58370656	chr18:58370656:C:G	rs9955628	C	G	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr18	58493035	58493036	chr18:58493036:G:A	rs11661670	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr18	58538828	58538829	chr18:58538829:G:T	rs35311276	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr18	58698924	58698925	chr18:58698925:C:G	rs62094041	C	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr18	58723916	58723917	chr18:58723917:C:A	rs750793492	C	A	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	58761633	58761634	chr18:58761634:T:C	rs8095265	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	58789432	58789433	chr18:58789433:T:A	chr18:58789433:T:A	T	A	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr18	58789445	58789446	chr18:58789446:C:T	chr18:58789446:C:T	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	58819853	58819854	chr18:58819854:T:A	rs72957168	T	A	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr18	58865107	58865108	chr18:58865108:C:T	rs75659069	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr18	58881197	58881198	chr18:58881198:A:G	rs149366882	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr18	59070960	59070961	chr18:59070961:C:G	rs11660721	C	G	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr18	59080489	59080490	chr18:59080490:T:C	rs11874612	T	C	C	Hoxc9_MA0485.1	7	1	-	8.269454499174456	1.3652254299688784	GGTCATGAATCAA
chr18	59209153	59209154	chr18:59209154:A:T	rs922048	A	T	T	Hoxc9_MA0485.1	9	1	-	8.65391349554736	4.826270927047337	GTCAATAAATCCC
chr18	59377901	59377902	chr18:59377902:G:A	rs4940460	G	A	A	Hoxc9_MA0485.1	2	1	-	7.754021452843209	6.377002975681985	GGCGATAAATCAT
chr18	59420050	59420051	chr18:59420051:T:A	rs9319950	T	A	T	Hoxc9_MA0485.1	7	1	-	7.621191773906606	2.4253405649900315	GGTCTTAAATCTC
chr18	59484805	59484806	chr18:59484806:T:C	rs12955474	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr18	59566144	59566145	chr18:59566145:A:G	rs150349535	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr18	59577427	59577428	chr18:59577428:G:T	rs73961262	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr18	59616347	59616348	chr18:59616348:C:A	rs11663187	C	A	c	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	59616364	59616365	chr18:59616365:T:A	rs2564478	T	A	a	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr18	59625955	59625956	chr18:59625956:C:G	rs720783	C	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr18	59810467	59810468	chr18:59810468:G:A	rs72984949	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	59815500	59815501	chr18:59815501:A:G	rs57610902	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr18	59953738	59953739	chr18:59953739:C:T	rs150398201	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr18	59953779	59953780	chr18:59953780:G:A	rs28461831	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr18	60053104	60053105	chr18:60053105:A:G	rs1573399	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr18	60178245	60178246	chr18:60178246:T:C	rs502921	T	C	-	Hoxc9_MA0485.1	4	1	-	8.44938128505267	7.281617571061087	TGCAATCAATCTT
chr18	60194727	60194728	chr18:60194728:G:A	rs1457489	G	A	A	Hoxc9_MA0485.1	12	1	-	7.748186146981862	7.494189193217311	GGACATAAATTCC
chr18	60387871	60387872	chr18:60387872:T:G	rs7228347	T	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr18	60762248	60762249	chr18:60762249:G:A	rs76604614	G	A	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr18	60793903	60793904	chr18:60793904:A:G	rs111743617	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	60808469	60808470	chr18:60808470:A:G	rs116291639	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr18	60930300	60930301	chr18:60930301:A:C	rs74533821	A	C	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	61034810	61034811	chr18:61034811:G:A	rs1391344	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr18	61571037	61571038	chr18:61571038:G:A	rs76900963	G	A	G	Hoxc9_MA0485.1	1	1	-	8.39209235795752	7.448292518712656	TCCCATAAATAAT
chr18	61595757	61595758	chr18:61595758:G:A	rs8088329	G	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	61606343	61606344	chr18:61606344:C:T	rs201158710	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr18	61606359	61606360	chr18:61606360:A:G	rs79090108	A	G	A	Hoxc9_MA0485.1	2	1	-	8.955446065201471	10.332464542362695	GCTCATAAATCCC
chr18	61636490	61636491	chr18:61636491:G:A	rs8098292	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr18	61720731	61720732	chr18:61720732:T:A	rs7238130	T	A	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr18	61818704	61818705	chr18:61818705:G:C	rs79991965	G	C	G	Hoxc9_MA0485.1	12	1	+	9.998703354252193	10.716759133167072	GGATATAAATCAG
chr18	61821347	61821348	chr18:61821348:T:C	rs77323740	T	C	T	Hoxc9_MA0485.1	4	1	-	8.027714637380724	6.85995092338914	GTGCATAAATCAG
chr18	61826237	61826238	chr18:61826238:C:G	rs7234737	C	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr18	61999041	61999042	chr18:61999042:C:T	rs146971669	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	62080784	62080785	chr18:62080785:G:A	rs13313626	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	62328951	62328952	chr18:62328952:G:A	rs76382273	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr18	62357201	62357202	chr18:62357202:A:G	rs34739845	A	G	A	Hoxc9_MA0485.1	2	1	+	8.143053410717581	7.366572241400026	GAAAGTAAATCAC
chr18	62438155	62438156	chr18:62438156:A:G	rs7241925	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr18	62527610	62527611	chr18:62527611:C:T	rs6567287	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	62994124	62994125	chr18:62994125:G:T	rs7238945	G	T	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	63068133	63068134	chr18:63068134:G:A	rs7239858	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr18	63112346	63112347	chr18:63112347:T:G	rs114609489	T	G	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr18	63112347	63112348	chr18:63112348:G:A	rs76572877	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr18	63313809	63313810	chr18:63313810:G:T	rs2051424	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	63427140	63427141	chr18:63427141:C:T	rs4941199	C	T	C	Hoxc9_MA0485.1	2	1	+	8.71683915494518	7.339820677783954	GCCCTTAAATCAC
chr18	63481089	63481090	chr18:63481090:T:C	rs12373321	T	C	C	Hoxc9_MA0485.1	11	1	-	8.298124506969607	3.885591108101239	AGATGTAAATCAG
chr18	63493151	63493152	chr18:63493152:T:C	rs2289521	T	C	t	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr18	63511229	63511230	chr18:63511230:T:C	rs12968378	T	C	C	Hoxc9_MA0485.1	3	1	-	11.016243140442349	6.234597876027128	TGCAATAAATCAG
chr18	63648541	63648542	chr18:63648542:G:C	rs151093374	G	C	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr18	63891169	63891170	chr18:63891170:A:G	rs62099125	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr18	64186834	64186835	chr18:64186835:T:G	rs62100380	T	G	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	64219367	64219368	chr18:64219368:G:C	rs77389193	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr18	64405101	64405102	chr18:64405102:T:A	rs62100462	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr18	64490384	64490385	chr18:64490385:T:G	rs79826960	T	G	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr18	64697188	64697189	chr18:64697189:T:A	rs80079883	T	A	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr18	64772096	64772097	chr18:64772097:C:T	rs778779	C	T	C	Hoxc9_MA0485.1	3	1	+	7.597446250243477	6.709193477220854	AGACGTAAATCCT
chr18	64855073	64855074	chr18:64855074:A:G	rs1787923	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr18	64887585	64887586	chr18:64887586:G:T	rs9966456	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	65458964	65458965	chr18:65458965:T:A	rs681287	T	A	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	65458974	65458975	chr18:65458975:G:T	rs681307	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	65786519	65786520	chr18:65786520:A:T	rs6566175	A	T	T	Hoxc9_MA0485.1	11	1	+	10.714100392477508	9.856511007268486	AACCATAAATCAG
chr18	66129427	66129428	chr18:66129428:A:T	rs62090385	A	T	A	Hoxc9_MA0485.1	6	1	+	8.99693607036062	5.468211604823103	GCTCGTAAATCAA
chr18	66129444	66129445	chr18:66129445:T:C	rs7239107	T	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr18	66175320	66175321	chr18:66175321:A:G	rs4556892	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr18	66999049	66999050	chr18:66999050:C:T	rs117574588	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	67035361	67035362	chr18:67035362:G:C	rs6566235	G	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr18	67151737	67151738	chr18:67151738:A:G	rs145154566	A	G	A	Hoxc9_MA0485.1	6	1	+	10.09184712253989	7.057641356030472	AGCTGTAAATCAA
chr18	67332440	67332441	chr18:67332441:A:G	rs9953838	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr18	67545774	67545775	chr18:67545775:T:C	rs12961019	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr18	67651225	67651226	chr18:67651226:C:G	rs555639439	C	G	C	Hoxc9_MA0485.1	10	1	+	9.877282659110675	5.076211851363397	TCCAATAAATCAG
chr18	67651245	67651246	chr18:67651246:G:C	rs2440514	G	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr18	67652438	67652439	chr18:67652439:A:G	rs2440517	A	G	A	Hoxc9_MA0485.1	11	1	-	7.650665623983683	6.455265154293626	AGCTGTCAATCTT
chr18	67756057	67756058	chr18:67756058:T:G	rs62093787	T	G	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr18	67893931	67893932	chr18:67893932:G:A	chr18:67893932:G:A	G	A	G	Hoxc9_MA0485.1	1	1	-	8.06682530753665	7.123025468291784	CCCCATCAATCTC
chr18	67981604	67981605	chr18:67981605:G:A	rs11661392	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr18	67981606	67981607	chr18:67981607:A:G	rs7239175	A	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr18	68056999	68057000	chr18:68057000:T:A	rs9965398	T	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	68182140	68182141	chr18:68182141:C:T	rs12957718	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	68234605	68234606	chr18:68234606:T:G	rs58981676	T	G	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr18	68403015	68403016	chr18:68403016:G:A	rs79052395	G	A	G	Hoxc9_MA0485.1	12	1	-	8.580375501631803	8.32637854786725	AGTCATGAATCAC
chr18	68714154	68714155	chr18:68714155:T:A	rs79590021	T	A	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	68819367	68819368	chr18:68819368:G:C	rs977408	G	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr18	68841062	68841063	chr18:68841063:G:T	rs79913666	G	T	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr18	69316925	69316926	chr18:69316926:G:C	rs8092830	G	C	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr18	70015514	70015515	chr18:70015515:C:T	rs17805166	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr18	70462474	70462475	chr18:70462475:G:A	rs1986841	G	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr18	70623142	70623143	chr18:70623143:G:A	rs17082921	G	A	G	Hoxc9_MA0485.1	2	1	-	9.163957176802423	7.7869386996411984	AGCCATAAAACAC
chr18	70627718	70627719	chr18:70627719:G:C	rs4891870	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr18	70659013	70659014	chr18:70659014:T:C	rs1510040	T	C	T	Hoxc9_MA0485.1	12	1	+	10.083448611563671	10.337445565328224	AGAAATAAATCAT
chr18	70967750	70967751	chr18:70967751:A:G	rs7232353	A	G	A	Hoxc9_MA0485.1	12	1	-	9.703397025028476	9.957393978793029	AGCCATGAATCAT
chr18	71221265	71221266	chr18:71221266:T:C	rs72954904	T	C	T	Hoxc9_MA0485.1	4	1	-	9.49969105698698	8.331927342995398	TGTAATAAATCTC
chr18	71443327	71443328	chr18:71443328:C:T	rs17084437	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr18	71443346	71443347	chr18:71443347:G:T	rs6566535	G	T	g	Hoxc9_MA0485.1	0	1	+	8.360863880043452	7.3054991283777	GCTCATAAATTAA
chr18	71597098	71597099	chr18:71597099:T:C	rs8094778	T	C	C	Hoxc9_MA0485.1	11	1	-	8.422007142694572	4.009473743826201	TCCAATCAATCAC
chr18	72122231	72122232	chr18:72122232:A:C	rs11874461	A	C	C	Hoxc9_MA0485.1	12	1	-	8.735280946408981	8.271222121258655	GCCAATAAATTTT
chr18	72368707	72368708	chr18:72368708:A:T	rs72963336	A	T	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr18	72602858	72602859	chr18:72602859:C:A	rs602564	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	73287505	73287506	chr18:73287506:T:C	rs885093	T	C	T	Hoxc9_MA0485.1	3	1	+	10.96438649094815	11.852639263970774	ACCTATAAATCAC
chr18	73340722	73340723	chr18:73340723:C:A	rs4891505	C	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr18	73461795	73461796	chr18:73461796:C:T	rs117259617	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr18	73461822	73461823	chr18:73461823:A:G	rs17752164	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr18	73531652	73531653	chr18:73531653:T:G	rs9957121	T	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr18	73545537	73545538	chr18:73545538:C:T	rs55890303	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr18	73626452	73626453	chr18:73626453:T:C	rs1943858	T	C	C	Hoxc9_MA0485.1	11	1	+	9.204866997912314	8.009466528222255	GACAGTAAATCTC
chr18	73836177	73836178	chr18:73836178:T:C	rs145107772	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr18	74242437	74242438	chr18:74242438:A:G	rs73969324	A	G	-	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	74284704	74284705	chr18:74284705:G:C	rs78690725	G	C	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr18	74378694	74378695	chr18:74378695:C:T	rs4084208	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr18	74412237	74412238	chr18:74412238:T:G	rs568624527	T	G	T	Hoxc9_MA0485.1	11	1	-	9.256009327186364	7.203019472287284	GGTCATCAATCAG
chr18	74479321	74479322	chr18:74479322:A:T	rs890339	A	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr18	74524309	74524310	chr18:74524310:C:G	rs190901947	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr18	74574456	74574457	chr18:74574457:T:C	rs12456406	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr18	74734177	74734178	chr18:74734178:C:G	rs143956951	C	G	C	Hoxc9_MA0485.1	1	1	+	7.64313753374509	8.78209801507676	ACCAGTAAATCCT
chr18	74796989	74796990	chr18:74796990:A:G	chr18:74796990:A:G	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr18	74828444	74828445	chr18:74828445:C:T	rs2042703	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr18	75088576	75088577	chr18:75088577:C:T	rs61447953	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr18	75358691	75358692	chr18:75358692:A:G	rs111317146	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr18	75358717	75358718	chr18:75358718:A:T	rs961756	A	T	A	Hoxc9_MA0485.1	2	1	-	8.859193681158253	8.316809185915721	GGTCATGAATCAT
chr18	75393853	75393854	chr18:75393854:G:A	rs147786068	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr18	75407943	75407944	chr18:75407944:T:C	rs112881783	T	C	T	Hoxc9_MA0485.1	5	1	+	7.561132671516133	3.0758213088776456	TCCAATGAATCAC
chr18	75418654	75418655	chr18:75418655:C:T	rs1307011940	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr18	75500088	75500089	chr18:75500089:G:A	rs67152229	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr18	75639069	75639070	chr18:75639070:C:T	rs895411091	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr18	75639090	75639091	chr18:75639091:A:G	rs79610127	A	G	A	Hoxc9_MA0485.1	11	1	-	8.398419941977341	7.203019472287284	GGTCATCAATCTG
chr18	76057693	76057694	chr18:76057694:C:G	rs9973170	C	G	.	Hoxc9_MA0485.1	12	1	+	8.588233295415382	7.870177516500504	AGCATTAAATCAC
chr18	76153838	76153839	chr18:76153839:A:C	rs1030566	A	C	A	Hoxc9_MA0485.1	7	1	+	8.71722826026232	1.8129991910567422	AGGAATAAATCAA
chr18	76153858	76153859	chr18:76153859:G:A	rs35449971	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	76263475	76263476	chr18:76263476:G:A	rs80011937	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	76322051	76322052	chr18:76322052:T:C	rs610870	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr18	76437689	76437690	chr18:76437690:G:A	rs28648391	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr18	76466182	76466183	chr18:76466183:T:G	rs17355696	T	G	T	Hoxc9_MA0485.1	12	1	-	9.08053180002654	9.924267935774889	TGTCGTAAATCAA
chr18	76741982	76741983	chr18:76741983:T:C	rs35943772	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr18	76796777	76796778	chr18:76796778:C:A	rs8084997	C	A	C	Hoxc9_MA0485.1	0	1	-	10.330068219043337	9.274703467377583	GTCCATAAATCTT
chr18	76943961	76943962	chr18:76943962:A:C	rs79861647	A	C	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr18	77037927	77037928	chr18:77037928:C:T	rs76843128	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr18	77057399	77057400	chr18:77057400:A:C	rs543106102	A	C	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr18	77145361	77145362	chr18:77145362:C:T	rs9951586	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr18	77239365	77239366	chr18:77239366:C:G	rs2850917	C	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr18	77492176	77492177	chr18:77492177:G:A	rs9945302	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr18	77587720	77587721	chr18:77587721:C:A	rs13313608	C	A	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr18	77622216	77622217	chr18:77622217:C:A	rs9951146	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	78124859	78124860	chr18:78124860:T:A	rs4799250	T	A	T	Hoxc9_MA0485.1	11	1	-	10.55340178499429	9.695812399785266	GTCTATAAATCAC
chr18	78231635	78231636	chr18:78231636:C:G	rs2174448	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	78314516	78314517	chr18:78314517:C:G	rs74882871	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	78399928	78399929	chr18:78399929:C:T	rs377314734	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr18	78424429	78424430	chr18:78424430:A:G	rs35885381	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr18	78458403	78458404	chr18:78458404:C:T	rs73970844	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr18	78580353	78580354	chr18:78580354:T:C	rs893489	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr18	78626561	78626562	chr18:78626562:G:A	rs7233614	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr18	78724905	78724906	chr18:78724906:C:T	rs12605704	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr18	78730031	78730032	chr18:78730032:T:C	rs144884910	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	78990762	78990763	chr18:78990763:A:G	rs3875080	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr18	79047184	79047185	chr18:79047185:C:T	rs7239280	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr18	79186128	79186129	chr18:79186129:C:T	rs6506737	C	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr18	79388698	79388699	chr18:79388699:A:G	rs304923	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr18	79407766	79407767	chr18:79407767:A:C	rs7235416	A	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr18	79430674	79430675	chr18:79430675:G:T	chr18:79430675:G:T	G	T	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr18	79683826	79683827	chr18:79683827:C:T	rs545978	C	T	C	Hoxc9_MA0485.1	4	1	-	7.87699241918599	9.044756133177573	CCCCGTAAATCCC
chr18	79795367	79795368	chr18:79795368:A:G	rs12958594	A	G	-	Hoxc9_MA0485.1	16	0	-	0	0	.
chr18	79868683	79868684	chr18:79868684:A:G	rs4799095	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr18	80057718	80057719	chr18:80057719:G:A	rs11659613	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr18	80057743	80057744	chr18:80057744:A:G	rs9958767	A	G	G	Hoxc9_MA0485.1	5	1	-	7.623291481625583	3.1379801189870964	ACCTGTCAATCAC
chr18	80104200	80104201	chr18:80104201:C:G	rs72976341	C	G	c	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr18	80171164	80171165	chr18:80171165:C:T	rs7242254	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr18	80241088	80241089	chr18:80241089:A:G	rs67693980	A	G	A	Hoxc9_MA0485.1	4	1	+	7.270103419576629	6.102339705585044	CCCCATAAAACAC
chr19	105020	105021	chr19:105021:G:C	rs7260412	G	C	g	Hoxc9_MA0485.1	1	1	+	8.444459609709371	7.3054991283777	TGTCATAAATTAA
chr19	295983	295984	chr19:295984:T:C	rs150777259	T	C	T	Hoxc9_MA0485.1	10	1	-	9.46386327568015	7.346792801806822	AGCCATAAATAAA
chr19	345582	345583	chr19:345583:G:T	rs117872315	G	T	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr19	382072	382073	chr19:382073:C:T	rs554575603	C	T	-	Hoxc9_MA0485.1	17	0	-	0	0	.
chr19	382081	382082	chr19:382082:T:C	rs865972016	T	C	-	Hoxc9_MA0485.1	8	1	-	8.83510462476957	1.9331461146346094	GCTCATCAATCAC
chr19	382693	382694	chr19:382694:A:G	rs867718524	A	G	a	Hoxc9_MA0485.1	24	0	-	0	0	.
chr19	382725	382726	chr19:382726:T:G	rs115192579	T	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	382726	382727	chr19:382727:T:G	rs116705712	T	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr19	397110	397111	chr19:397111:C:G	rs7408940	C	G	G	Hoxc9_MA0485.1	4	1	-	7.538735051248188	3.568572083990112	AGTAGTCAATCAC
chr19	406173	406174	chr19:406174:T:A	rs112599136	T	A	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	415407	415408	chr19:415408:T:C	rs111211801	T	C	-	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	548456	548457	chr19:548457:A:G	rs186818173	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	569864	569865	chr19:569865:T:C	rs4919856	T	C	-	Hoxc9_MA0485.1	5	1	+	7.041235189973597	2.55592382733511	GCCTGTGAATCAT
chr19	779535	779536	chr19:779536:C:T	rs116171533	C	T	-	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	916736	916737	chr19:916737:G:A	rs184749	G	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr19	928295	928296	chr19:928296:C:T	rs559212400	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr19	1357496	1357497	chr19:1357497:G:A	rs1048909	G	A	g	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	1372121	1372122	chr19:1372122:C:T	rs7255159	C	T	C	Hoxc9_MA0485.1	3	1	+	7.394467254724196	6.506214481701572	GCCCATAAATACT
chr19	1372132	1372133	chr19:1372133:C:T	rs2668427	C	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr19	1372138	1372139	chr19:1372139:G:T	rs189931951	G	T	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr19	1372146	1372147	chr19:1372147:A:G	rs146046203	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr19	1417995	1417996	chr19:1417996:T:G	rs73920481	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr19	2028985	2028986	chr19:2028986:T:C	rs7257116	T	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	2035037	2035038	chr19:2035038:C:G	rs72981410	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr19	2060983	2060984	chr19:2060984:A:C	rs564984402	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	2170205	2170206	chr19:2170206:A:C	rs4807208	A	C	C	Hoxc9_MA0485.1	7	1	+	6.983087028940758	0.078857959735179	GGCTGCAAATCAC
chr19	2467848	2467849	chr19:2467849:C:T	rs111706781	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr19	2617423	2617424	chr19:2617424:A:C	rs10411547	A	C	a	Hoxc9_MA0485.1	20	0	+	0	0	.
chr19	2618703	2618704	chr19:2618704:G:A	rs1246093123	G	A	G	Hoxc9_MA0485.1	1	1	-	7.572747637624446	6.62894779837958	TCCTGTAAATCTA
chr19	2636167	2636168	chr19:2636168:G:A	rs77429519	G	A	G	Hoxc9_MA0485.1	12	1	+	7.2633229748620805	7.13764261802861	CAGCATAAATCAG
chr19	2699586	2699587	chr19:2699587:T:C	rs10412559	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	2701576	2701577	chr19:2701577:C:G	rs113341270	C	G	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	2731400	2731401	chr19:2731401:T:G	rs28754467	T	G	G	Hoxc9_MA0485.1	8	1	-	7.566997741728559	2.7165955697838986	GTCCATCAATCTA
chr19	2731426	2731427	chr19:2731427:C:T	rs76763741	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	2779135	2779136	chr19:2779136:T:C	rs1640262	T	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr19	2792119	2792120	chr19:2792120:G:A	rs2238618	G	A	g	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr19	2792129	2792130	chr19:2792130:C:G	rs1076447	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	2973645	2973646	chr19:2973646:G:A	rs79897000	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr19	3137138	3137139	chr19:3137139:G:A	rs388460	G	A	A	Hoxc9_MA0485.1	1	1	-	9.251408441532611	8.307608602287747	CCCAATAAATCTT
chr19	3184631	3184632	chr19:3184632:G:A	rs525761	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr19	3342245	3342246	chr19:3342246:C:T	rs34282826	C	T	c	Hoxc9_MA0485.1	16	0	+	0	0	.
chr19	3451702	3451703	chr19:3451703:A:G	rs77490233	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr19	3942909	3942910	chr19:3942910:A:T	rs1049769374	A	T	-	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr19	3984541	3984542	chr19:3984542:T:C	rs28635819	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr19	4246269	4246270	chr19:4246270:C:A	rs1638307	C	A	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr19	4268404	4268405	chr19:4268405:C:T	rs4807564	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	4386913	4386914	chr19:4386914:C:T	rs75177132	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr19	4467733	4467734	chr19:4467734:A:G	rs8111106	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	4662186	4662187	chr19:4662187:C:T	rs72620523	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr19	4724508	4724509	chr19:4724509:T:G	rs139719395	T	G	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr19	4838158	4838159	chr19:4838159:C:A	rs74574281	C	A	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr19	4843231	4843232	chr19:4843232:T:C	rs12608908	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr19	4843236	4843237	chr19:4843237:T:C	rs2656915	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr19	4861210	4861211	chr19:4861211:C:T	rs1421327275	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr19	4861218	4861219	chr19:4861219:G:C	rs116096561	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr19	4861227	4861228	chr19:4861228:C:T	rs139087834	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr19	4897267	4897268	chr19:4897268:G:C	rs4807662	G	C	G	Hoxc9_MA0485.1	10	1	-	9.853668828073568	5.052598020326291	AACAATAAATCAA
chr19	4897290	4897291	chr19:4897291:T:C	rs2779172	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	5103606	5103607	chr19:5103607:G:A	rs961062034	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr19	5156359	5156360	chr19:5156360:T:C	rs147630349	T	C	T	Hoxc9_MA0485.1	0	1	-	7.67804392582787	8.210859059118873	AGCCGTGAATCTT
chr19	5314677	5314678	chr19:5314678:A:G	rs112205916	A	G	A	Hoxc9_MA0485.1	11	1	+	7.261509837071716	2.848976438203348	AGGCATGAATCAC
chr19	5627667	5627668	chr19:5627668:C:T	rs147810740	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr19	5683292	5683293	chr19:5683293:A:C	rs142898735	A	C	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	5691792	5691793	chr19:5691793:C:T	rs113495838	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr19	5860040	5860041	chr19:5860041:G:A	rs73538630	G	A	g	Hoxc9_MA0485.1	26	0	+	0	0	.
chr19	5957462	5957463	chr19:5957463:G:A	rs11879295	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	6043584	6043585	chr19:6043585:T:G	rs182794516	T	G	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	6126786	6126787	chr19:6126787:A:G	rs4439887	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	6254451	6254452	chr19:6254452:G:A	rs13382119	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	6343880	6343881	chr19:6343881:T:C	rs28421030	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr19	6524394	6524395	chr19:6524395:G:T	rs12151125	G	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr19	6595590	6595591	chr19:6595591:C:T	rs344597	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr19	6624523	6624524	chr19:6624524:G:A	rs10424924	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	6632881	6632882	chr19:6632882:G:A	rs4580308	G	A	g	Hoxc9_MA0485.1	29	0	-	0	0	.
chr19	6636818	6636819	chr19:6636819:A:G	rs72620532	A	G	N	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	6636827	6636828	chr19:6636828:T:C	rs149933701	T	C	t	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr19	6761367	6761368	chr19:6761368:C:T	rs59615742	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr19	6860538	6860539	chr19:6860539:T:C	rs11668992	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr19	6947699	6947700	chr19:6947700:G:T	rs10405515	G	T	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	7067159	7067160	chr19:7067160:T:C	rs2115472	T	C	c	Hoxc9_MA0485.1	8	1	-	7.6582600802780805	0.7563015701431198	TGACATCAATCAG
chr19	7182951	7182952	chr19:7182952:A:C	rs10500204	A	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr19	7251576	7251577	chr19:7251577:A:T	rs10415205	A	T	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr19	7368356	7368357	chr19:7368357:T:C	rs28448498	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr19	7433674	7433675	chr19:7433675:G:C	rs141756417	G	C	G	Hoxc9_MA0485.1	11	1	-	7.646084359771168	5.286540815801879	TCTCATAAATCCT
chr19	7560472	7560473	chr19:7560473:A:G	rs559654406	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr19	7691384	7691385	chr19:7691385:A:T	rs62110718	A	T	a	Hoxc9_MA0485.1	13	0	+	0	0	.
chr19	7691464	7691465	chr19:7691465:A:T	rs62110723	A	T	N	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr19	7771718	7771719	chr19:7771719:T:C	rs605673	T	C	c	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr19	7771719	7771720	chr19:7771720:G:A	rs571318	G	A	a	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	7944125	7944126	chr19:7944126:T:C	rs552771054	T	C	T	Hoxc9_MA0485.1	8	1	-	7.815516276200582	0.9135577660656223	GTCAATCAATCAG
chr19	7944130	7944131	chr19:7944131:T:C	rs11669069	T	C	T	Hoxc9_MA0485.1	3	1	-	7.815516276200582	3.0338710117853593	GTCAATCAATCAG
chr19	8006916	8006917	chr19:8006917:C:G	rs1352884053	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr19	8203339	8203340	chr19:8203340:G:A	rs10426036	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr19	9008516	9008517	chr19:9008517:C:T	rs4804393	C	T	T	Hoxc9_MA0485.1	4	1	-	10.781006000477964	11.948769714469547	GGCCGTAAATCTG
chr19	9572038	9572039	chr19:9572039:G:A	rs7252361	G	A	A	Hoxc9_MA0485.1	0	1	+	7.540328016598168	7.007512883307165	GGGCATGAATCAT
chr19	9791520	9791521	chr19:9791521:G:A	rs10410379	G	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr19	9883609	9883610	chr19:9883610:G:A	rs10419418	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr19	10022116	10022117	chr19:10022117:C:T	rs1673136	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	10271960	10271961	chr19:10271961:G:A	rs5030391	G	A	G	Hoxc9_MA0485.1	12	1	-	7.904662577748234	7.650665623983683	AGCTGTCAATCTC
chr19	10425569	10425570	chr19:10425570:C:T	rs146307257	C	T	C	Hoxc9_MA0485.1	4	1	-	6.817558745910761	7.985322459902345	TGCAGTCAATCTG
chr19	10504345	10504346	chr19:10504346:T:A	rs553496529	T	A	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr19	10555773	10555774	chr19:10555774:T:C	rs6511703	T	C	C	Hoxc9_MA0485.1	8	1	-	6.9477171333753995	0.04575862324044028	GGCATTCAATCAC
chr19	10876336	10876337	chr19:10876337:A:G	rs1541596	A	G	G	Hoxc9_MA0485.1	5	1	-	7.809425233342171	3.3241138707036857	GGACATAAATATT
chr19	10888538	10888539	chr19:10888539:G:T	rs577964300	G	T	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	10971456	10971457	chr19:10971457:T:C	rs12981555	T	C	T	Hoxc9_MA0485.1	6	1	-	9.8794718329477	6.845266066438282	TGCTATAAATCTA
chr19	11269535	11269536	chr19:11269536:T:C	rs4804158	T	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr19	11269690	11269691	chr19:11269691:A:T	rs4804160	A	T	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	11344583	11344584	chr19:11344584:C:G	rs564116422	C	G	c	Hoxc9_MA0485.1	17	0	+	0	0	.
chr19	11399637	11399638	chr19:11399638:A:G	rs317913	A	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr19	11528727	11528728	chr19:11528728:A:C	chr19:11528728:A:C	A	C	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr19	11737823	11737824	chr19:11737824:G:A	rs76097917	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr19	12092071	12092072	chr19:12092072:A:G	rs10413855	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr19	12195661	12195662	chr19:12195662:C:T	rs557871409	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr19	12295998	12295999	chr19:12295999:G:A	rs548531806	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr19	12400123	12400124	chr19:12400124:G:T	rs116218733	G	T	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr19	12439965	12439966	chr19:12439966:A:G	rs7259093	A	G	-	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr19	12607804	12607805	chr19:12607805:T:C	rs4804202	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr19	12611514	12611515	chr19:12611515:C:G	rs78456831	C	G	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr19	12952670	12952671	chr19:12952671:C:T	rs181929934	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr19	14554120	14554121	chr19:14554121:C:T	rs8104167	C	T	.	Hoxc9_MA0485.1	32	0	-	0	0	.
chr19	14636642	14636643	chr19:14636643:G:C	rs7256688	G	C	.	Hoxc9_MA0485.1	32	0	-	0	0	.
chr19	14835135	14835136	chr19:14835136:G:T	rs17276460	G	T	.	Hoxc9_MA0485.1	6	1	-	8.249934646402732	10.423265941733714	CACCATCAATCAT
chr19	14835262	14835263	chr19:14835263:G:C	rs7253604	G	C	.	Hoxc9_MA0485.1	27	0	-	0	0	.
chr19	15251981	15251982	chr19:15251982:T:C	rs138362555	T	C	T	Hoxc9_MA0485.1	3	1	+	9.05136543246016	9.939618205482782	GACTGTAAATCTC
chr19	15476255	15476256	chr19:15476256:T:A	rs35927052	T	A	T	Hoxc9_MA0485.1	6	1	-	8.767915332999571	5.239190867462056	GGTCATAAATTTG
chr19	15593971	15593972	chr19:15593972:G:A	rs2060260	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr19	15629409	15629410	chr19:15629410:C:T	rs4239614	C	T	c	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr19	15629457	15629458	chr19:15629458:C:G	rs2239367	C	G	g	Hoxc9_MA0485.1	30	0	+	0	0	.
chr19	15651867	15651868	chr19:15651868:A:T	rs2683035	A	T	A	Hoxc9_MA0485.1	6	1	+	8.263459043497361	4.734734577959842	GGCATTAAATCTC
chr19	15780423	15780424	chr19:15780424:C:T	rs12976462	C	T	.	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	15780429	15780430	chr19:15780430:G:C	rs111653956	G	C	.	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr19	15836444	15836445	chr19:15836445:G:A	rs77196782	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr19	15926548	15926549	chr19:15926549:A:G	rs7249167	A	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr19	15930952	15930953	chr19:15930953:C:G	rs757413121	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr19	15930961	15930962	chr19:15930962:G:A	rs12981029	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr19	16316795	16316796	chr19:16316796:A:G	rs6512096	A	G	g	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	16382217	16382218	chr19:16382218:C:T	rs74463730	C	T	C	Hoxc9_MA0485.1	0	1	+	6.581930002421976	6.814273659941345	CGCAGTGAATCAG
chr19	16445628	16445629	chr19:16445629:G:T	rs117061321	G	T	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr19	16463696	16463697	chr19:16463697:T:C	rs10401133	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr19	16977169	16977170	chr19:16977170:C:T	rs16981523	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	17020638	17020639	chr19:17020639:T:C	rs151068779	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr19	17120927	17120928	chr19:17120928:T:C	rs35535716	T	C	c	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr19	17135361	17135362	chr19:17135362:C:T	rs34777901	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	17508063	17508064	chr19:17508064:C:T	rs56990906	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	17508064	17508065	chr19:17508065:G:A	rs897263614	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr19	17512457	17512458	chr19:17512458:C:T	rs895419642	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr19	17651734	17651735	chr19:17651735:G:C	rs11667966	G	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	17846499	17846500	chr19:17846500:T:C	rs2110586	T	C	C	Hoxc9_MA0485.1	2	1	-	8.041276092358688	7.264794923041132	AGACATCAATCTC
chr19	17916167	17916168	chr19:17916168:C:A	chr19:17916168:C:A	C	A	c	Hoxc9_MA0485.1	17	0	+	0	0	.
chr19	18192197	18192198	chr19:18192198:C:A	rs55650549	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr19	18192206	18192207	chr19:18192207:A:G	rs1016015804	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr19	18275420	18275421	chr19:18275421:C:T	rs113151502	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	18287524	18287525	chr19:18287525:T:G	rs12610691	T	G	T	Hoxc9_MA0485.1	8	1	-	9.839815578612894	4.989413406668235	AACAATAAATCTC
chr19	18431890	18431891	chr19:18431891:C:T	rs10408290	C	T	c	Hoxc9_MA0485.1	0	1	+	9.345319395162466	9.577663052681835	CGCCATCAATCAG
chr19	18434530	18434531	chr19:18434531:A:C	rs10442	A	C	C	Hoxc9_MA0485.1	6	1	+	8.857717927639479	6.684386632308496	GCCCATAAATAAA
chr19	18475708	18475709	chr19:18475709:T:A	rs10425982	T	A	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr19	18486647	18486648	chr19:18486648:C:T	rs7257862	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr19	18486648	18486649	chr19:18486649:G:A	rs780952727	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr19	18587208	18587209	chr19:18587209:T:C	rs4808823	T	C	T	Hoxc9_MA0485.1	3	1	-	6.888244257850971	2.1065989934357483	CCCAGTAAATCCT
chr19	18875835	18875836	chr19:18875836:T:C	rs73923175	T	C	t	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr19	18969779	18969780	chr19:18969780:C:T	rs115887303	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr19	18976019	18976020	chr19:18976020:C:T	rs114440650	C	T	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr19	19105995	19105996	chr19:19105996:G:A	rs78744359	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr19	19158064	19158065	chr19:19158065:G:A	rs11878301	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr19	19578664	19578665	chr19:19578665:C:T	rs16996166	C	T	C	Hoxc9_MA0485.1	2	1	+	8.583838588285621	7.206820111124398	TCCAGTAAATCAA
chr19	19602913	19602914	chr19:19602914:C:A	rs117524079	C	A	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	19669399	19669400	chr19:19669400:C:G	rs12982049	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	19767453	19767454	chr19:19767454:G:A	rs12977842	G	A	g	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	19901499	19901500	chr19:19901500:C:G	rs117675947	C	G	-	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	19955288	19955289	chr19:19955289:A:G	rs1985787	A	G	A	Hoxc9_MA0485.1	8	1	+	8.182323744794328	1.2803652346593701	CCCCATAAATTTT
chr19	20038884	20038885	chr19:20038885:T:G	chr19:20038885:T:G	T	G	t	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr19	20038898	20038899	chr19:20038899:A:G	rs10420900	A	G	N	Hoxc9_MA0485.1	6	1	+	9.26908716296208	6.234881396452658	GAGCATAAATCAC
chr19	20167746	20167747	chr19:20167747:T:A	rs79480052	T	A	.	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	20167779	20167780	chr19:20167780:C:A	rs950268690	C	A	.	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	20182341	20182342	chr19:20182342:C:T	rs118141103	C	T	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	20279768	20279769	chr19:20279769:T:C	rs12461682	T	C	.	Hoxc9_MA0485.1	26	0	-	0	0	.
chr19	20292731	20292732	chr19:20292732:G:T	rs10410777	G	T	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr19	20365368	20365369	chr19:20365369:C:T	rs11669225	C	T	.	Hoxc9_MA0485.1	30	0	-	0	0	.
chr19	20365375	20365376	chr19:20365376:A:G	rs111970173	A	G	.	Hoxc9_MA0485.1	23	0	-	0	0	.
chr19	20561175	20561176	chr19:20561176:C:T	rs34642251	C	T	.	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	20565243	20565244	chr19:20565244:T:C	rs75503265	T	C	.	Hoxc9_MA0485.1	11	1	+	8.182323744794328	6.986923275104271	CCCCATAAATTTT
chr19	20660875	20660876	chr19:20660876:G:A	rs28536599	G	A	.	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	20660918	20660919	chr19:20660919:T:C	rs78316478	T	C	.	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr19	20870858	20870859	chr19:20870859:C:G	rs17679966	C	G	-	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	20999900	20999901	chr19:20999901:G:C	rs76142753	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr19	20999903	20999904	chr19:20999904:G:C	rs140399497	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr19	20999908	20999909	chr19:20999909:G:A	rs543036870	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr19	21092466	21092467	chr19:21092467:A:G	rs112812752	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr19	21430853	21430854	chr19:21430854:C:T	rs62110428	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr19	21430879	21430880	chr19:21430880:T:A	rs7253886	T	A	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	21482185	21482186	chr19:21482186:T:C	rs2650778	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr19	21678152	21678153	chr19:21678153:C:A	rs73018258	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	21678171	21678172	chr19:21678172:T:G	rs12975447	T	G	T	Hoxc9_MA0485.1	9	1	+	6.2581527087671285	-0.6300731056065051	CGACGTCAATCAG
chr19	21758503	21758504	chr19:21758504:G:C	rs12459784	G	C	g	Hoxc9_MA0485.1	10	1	-	9.619389786413345	4.818318978666068	AGAAATAAATCAG
chr19	21877204	21877205	chr19:21877205:G:A	rs10417634	G	A	g	Hoxc9_MA0485.1	13	0	+	0	0	.
chr19	22431675	22431676	chr19:22431676:C:T	rs12609595	C	T	.	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr19	22820935	22820936	chr19:22820936:G:T	rs434895	G	T	.	Hoxc9_MA0485.1	6	1	+	7.576603239860799	7.082084540832702	GGCTGTGAATCTC
chr19	23241589	23241590	chr19:23241590:C:A	rs755188200	C	A	-	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	23284085	23284086	chr19:23284086:G:A	rs191807064	G	A	-	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	23287210	23287211	chr19:23287211:C:T	chr19:23287211:C:T	C	T	-	Hoxc9_MA0485.1	21	0	+	0	0	.
chr19	23520593	23520594	chr19:23520594:A:T	rs7252948	A	T	A	Hoxc9_MA0485.1	0	1	+	6.08737067609687	5.564821057722118	AGCCATACATCAC
chr19	23780312	23780313	chr19:23780313:C:T	rs10417383	C	T	T	Hoxc9_MA0485.1	2	1	+	5.764866983249468	4.387848506088245	GGCCATAATTCTC
chr19	23914150	23914151	chr19:23914151:C:T	rs62114214	C	T	c	Hoxc9_MA0485.1	23	0	-	0	0	.
chr19	23914714	23914715	chr19:23914715:T:C	rs77326659	T	C	t	Hoxc9_MA0485.1	3	1	+	8.183480757274687	9.071733530297308	GGCTGTCAATCTT
chr19	23914728	23914729	chr19:23914729:C:A	chr19:23914729:C:A	C	A	c	Hoxc9_MA0485.1	17	0	+	0	0	.
chr19	24031062	24031063	chr19:24031063:C:T	rs62117579	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr19	24159781	24159782	chr19:24159782:A:C	rs6511686	A	C	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	27352036	27352037	chr19:27352037:T:C	rs73529920	T	C	.	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	27392413	27392414	chr19:27392414:C:G	rs62111084	C	G	.	Hoxc9_MA0485.1	17	0	-	0	0	.
chr19	27392422	27392423	chr19:27392423:T:G	rs113843226	T	G	.	Hoxc9_MA0485.1	8	1	-	8.796301631718725	3.9458994597740666	TGCAATAAATAAT
chr19	27442295	27442296	chr19:27442296:A:G	rs73022586	A	G	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	27833163	27833164	chr19:27833164:G:A	rs6510360	G	A	a	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	27971209	27971210	chr19:27971210:C:A	rs75070951	C	A	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr19	28242464	28242465	chr19:28242465:A:G	rs7249972	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr19	28296892	28296893	chr19:28296893:A:G	rs10409717	A	G	G	Hoxc9_MA0485.1	4	1	+	6.995160975556374	5.82739726156479	GGACATGAATCTG
chr19	28318459	28318460	chr19:28318460:C:T	rs73930858	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	28359932	28359933	chr19:28359933:T:C	rs113403970	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	28710477	28710478	chr19:28710478:A:G	rs78695812	A	G	a	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr19	28859287	28859288	chr19:28859288:A:C	rs11665909	A	C	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr19	29052883	29052884	chr19:29052884:C:T	rs934431	C	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr19	29245235	29245236	chr19:29245236:G:A	rs80070057	G	A	G	Hoxc9_MA0485.1	12	1	+	8.16522441511518	8.03954405828171	ACTAATAAATCTG
chr19	29290240	29290241	chr19:29290241:G:A	rs2865862	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr19	29290313	29290314	chr19:29290314:T:C	rs2865863	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr19	29331949	29331950	chr19:29331950:T:C	rs2111497	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	29483181	29483182	chr19:29483182:G:A	rs75327851	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr19	29685565	29685566	chr19:29685566:A:T	rs113075544	A	T	A	Hoxc9_MA0485.1	0	1	-	8.209404628929846	8.731954247304598	TGCCATAAATATG
chr19	29685570	29685571	chr19:29685571:C:T	rs78937835	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr19	29837304	29837305	chr19:29837305:C:T	rs728427	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr19	30059605	30059606	chr19:30059606:C:A	rs2161210	C	A	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr19	30103130	30103131	chr19:30103131:T:C	rs1872025	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr19	30156583	30156584	chr19:30156584:T:G	rs6509994	T	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr19	30250349	30250350	chr19:30250350:C:T	rs7254263	C	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	30255845	30255846	chr19:30255846:T:C	rs7257460	T	C	C	Hoxc9_MA0485.1	4	1	-	9.274703467377583	8.106939753386	TTCCATAAATCTT
chr19	30285057	30285058	chr19:30285058:A:G	rs2024299	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	30361754	30361755	chr19:30361755:T:C	rs79555218	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr19	30447387	30447388	chr19:30447388:G:A	rs149855355	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	30447517	30447518	chr19:30447518:G:A	rs58658292	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	30547444	30547445	chr19:30547445:A:G	rs75284776	A	G	A	Hoxc9_MA0485.1	5	1	-	10.312538251601092	5.827226888962607	TGCAGTAAATCAT
chr19	30579558	30579559	chr19:30579559:C:T	rs56034726	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr19	30696525	30696526	chr19:30696526:G:A	rs75260496	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr19	30740968	30740969	chr19:30740969:G:C	rs16964564	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr19	30848713	30848714	chr19:30848714:T:C	rs17628152	T	C	T	Hoxc9_MA0485.1	8	1	-	9.268323262685929	2.366364752550968	GTCCATCAATCAC
chr19	31038368	31038369	chr19:31038369:T:C	rs114064160	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	31348210	31348211	chr19:31348211:C:T	rs146869514	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	31411728	31411729	chr19:31411729:A:G	rs8104807	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	31989781	31989782	chr19:31989782:A:G	rs12610055	A	G	A	Hoxc9_MA0485.1	8	1	+	7.82537205892121	0.9234135487862501	GGATATCAATCAG
chr19	32018332	32018333	chr19:32018333:A:G	rs16966609	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr19	32069018	32069019	chr19:32069019:T:C	rs10413956	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr19	32082220	32082221	chr19:32082221:A:C	rs28697979	A	C	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr19	32091347	32091348	chr19:32091348:C:A	rs147138724	C	A	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr19	32103915	32103916	chr19:32103916:T:C	rs8105292	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr19	32104563	32104564	chr19:32104564:T:C	rs78390532	T	C	T	Hoxc9_MA0485.1	6	1	-	11.060516941446924	8.026311174937504	GGCTATAAATCTG
chr19	32222002	32222003	chr19:32222003:A:C	rs10406073	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr19	32350298	32350299	chr19:32350299:G:A	rs12460071	G	A	g	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	32405306	32405307	chr19:32405307:G:A	rs150133097	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	32405313	32405314	chr19:32405314:G:A	rs75148052	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	32457413	32457414	chr19:32457414:T:C	rs73036023	T	C	T	Hoxc9_MA0485.1	8	1	-	6.930643218540063	0.02868470840510351	AGCCACAAATCTG
chr19	32459371	32459372	chr19:32459372:A:G	rs138523113	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	32660895	32660896	chr19:32660896:C:T	rs259256	C	T	c	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr19	32693462	32693463	chr19:32693463:A:G	rs12611419	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	32842248	32842249	chr19:32842249:G:A	rs2287881	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr19	32873482	32873483	chr19:32873483:G:C	rs74646163	G	C	G	Hoxc9_MA0485.1	1	1	+	8.320221041054074	7.181260559722401	AGCCATAAAACAA
chr19	32875788	32875789	chr19:32875789:C:T	rs1990986	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	32917997	32917998	chr19:32917998:G:C	rs2278401	G	C	G	Hoxc9_MA0485.1	10	1	-	8.00861959384148	3.207548786094202	GTTTGTAAATCAC
chr19	33005825	33005826	chr19:33005826:G:C	rs112277911	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr19	33362353	33362354	chr19:33362354:C:T	rs56187503	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr19	33408839	33408840	chr19:33408840:G:A	rs11084730	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	33416761	33416762	chr19:33416762:C:T	rs79457146	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	33426984	33426985	chr19:33426985:T:C	rs563423118	T	C	T	Hoxc9_MA0485.1	4	1	-	8.641407558427671	7.473643844436087	TGCCATAAAACAC
chr19	33426996	33426997	chr19:33426997:G:A	rs78293394	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	33427007	33427008	chr19:33427008:G:A	rs113501180	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	33462924	33462925	chr19:33462925:T:C	rs75449530	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr19	33496167	33496168	chr19:33496168:A:G	rs3786913	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr19	33548116	33548117	chr19:33548117:C:T	rs79711805	C	T	C	Hoxc9_MA0485.1	2	1	+	7.088152999295201	5.711134522133977	GGCCATGAATAAG
chr19	33552467	33552468	chr19:33552468:C:G	rs12609149	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr19	33626185	33626186	chr19:33626186:A:G	rs8112967	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr19	33642802	33642803	chr19:33642803:T:C	rs10853928	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr19	33693294	33693295	chr19:33693295:C:T	rs112596066	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	33697802	33697803	chr19:33697803:C:T	rs79422168	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr19	33767571	33767572	chr19:33767572:C:T	rs55919901	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr19	33771687	33771688	chr19:33771688:G:A	rs921532155	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr19	33771694	33771695	chr19:33771695:T:A	rs59181704	T	A	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr19	33795082	33795083	chr19:33795083:T:G	rs1327388848	T	G	T	Hoxc9_MA0485.1	10	1	+	8.261267384668809	5.2640324812302834	ATCCATAAATTAA
chr19	33826146	33826147	chr19:33826147:C:T	rs118077433	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr19	33828781	33828782	chr19:33828782:G:C	rs75257270	G	C	G	Hoxc9_MA0485.1	0	1	-	7.392345261193711	8.68005367037883	CACCATCAATCTT
chr19	33877791	33877792	chr19:33877792:G:T	rs7249257	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr19	33877979	33877980	chr19:33877980:G:A	rs7252497	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	33915378	33915379	chr19:33915379:C:A	chr19:33915379:C:A	C	A	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	33951640	33951641	chr19:33951641:A:G	rs10424147	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	34218433	34218434	chr19:34218434:G:A	chr19:34218434:G:A	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr19	34218435	34218436	chr19:34218436:G:T	rs1038204105	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr19	34504633	34504634	chr19:34504634:A:G	rs116292253	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	34971581	34971582	chr19:34971582:G:A	rs10413700	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	34972741	34972742	chr19:34972742:C:T	rs77396367	C	T	C	Hoxc9_MA0485.1	3	1	+	7.992578477380553	7.1043257043579295	GAACATAAATCCC
chr19	35073497	35073498	chr19:35073498:A:G	rs61280590	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr19	35252772	35252773	chr19:35252773:G:A	rs112164782	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr19	35255895	35255896	chr19:35255896:G:A	rs2853336	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	35430604	35430605	chr19:35430605:C:A	rs73039344	C	A	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr19	35690599	35690600	chr19:35690600:G:A	rs73602823	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	35741973	35741974	chr19:35741974:G:A	rs12609803	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	35748498	35748499	chr19:35748499:A:G	rs559148800	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr19	35748515	35748516	chr19:35748516:G:A	rs183461712	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	35901419	35901420	chr19:35901420:G:A	rs76369906	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr19	36042332	36042333	chr19:36042333:C:T	rs56270047	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr19	36595267	36595268	chr19:36595268:T:C	rs3111545	T	C	t	Hoxc9_MA0485.1	8	1	-	7.446834506476044	0.5448759963410863	GGTCATAAATTCA
chr19	36776172	36776173	chr19:36776173:T:C	rs57098157	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr19	36956044	36956045	chr19:36956045:G:A	rs524802	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	37311210	37311211	chr19:37311211:G:C	rs12462487	G	C	g	Hoxc9_MA0485.1	13	0	+	0	0	.
chr19	37572445	37572446	chr19:37572446:G:A	rs547118933	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr19	37868169	37868170	chr19:37868170:G:A	rs7250868	G	A	G	Hoxc9_MA0485.1	4	1	+	7.493905545557232	8.661669259548814	CCCAGTAAATCTA
chr19	37868179	37868180	chr19:37868180:C:A	rs7250668	C	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr19	37899012	37899013	chr19:37899013:T:A	rs35209753	T	A	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	37928781	37928782	chr19:37928782:A:G	rs1336643504	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr19	37941906	37941907	chr19:37941907:C:A	chr19:37941907:C:A	C	A	-	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr19	38050105	38050106	chr19:38050106:G:A	rs1654341	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr19	38374776	38374777	chr19:38374777:C:A	rs200109220	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr19	38374778	38374779	chr19:38374779:G:A	rs201665089	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	38653342	38653343	chr19:38653343:T:C	rs77405583	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr19	38655211	38655212	chr19:38655212:A:G	rs73933039	A	G	A	Hoxc9_MA0485.1	4	1	+	9.139089023762129	7.971325309770546	GGCCATAAATATA
chr19	38775648	38775649	chr19:38775649:T:C	rs4802817	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr19	38813175	38813176	chr19:38813176:G:T	rs116896264	G	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr19	38904690	38904691	chr19:38904691:T:C	rs11879872	T	C	T	Hoxc9_MA0485.1	4	1	-	8.700093152847806	7.532329438856222	TGCAATGAATCAC
chr19	38919969	38919970	chr19:38919970:G:A	rs143392503	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	39128567	39128568	chr19:39128568:T:A	rs188677165	T	A	T	Hoxc9_MA0485.1	11	1	-	9.477303263523	8.619713878313977	GCAAATAAATCAT
chr19	39520923	39520924	chr19:39520924:A:G	rs28612323	A	G	A	Hoxc9_MA0485.1	5	1	-	6.726794204305476	2.241482841666991	GCCCATAAATGTC
chr19	39599266	39599267	chr19:39599267:A:G	rs62120747	A	G	-	Hoxc9_MA0485.1	12	1	+	7.859638875053299	7.985319231886769	AGGAATAAATCTA
chr19	39705875	39705876	chr19:39705876:G:A	rs146538011	G	A	-	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr19	39847407	39847408	chr19:39847408:G:A	rs12986238	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr19	39890466	39890467	chr19:39890467:T:G	rs867085674	T	G	.	Hoxc9_MA0485.1	7	1	-	8.602330707745816	1.6981016385402379	AATAATAAATCAG
chr19	39890479	39890480	chr19:39890480:C:G	rs2542333	C	G	.	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	40279775	40279776	chr19:40279776:C:G	rs75018496	C	G	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr19	40348893	40348894	chr19:40348894:T:G	rs10422343	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	40348904	40348905	chr19:40348905:T:A	rs749393470	T	A	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr19	40348905	40348906	chr19:40348906:C:A	rs768832516	C	A	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	40376444	40376445	chr19:40376445:T:C	rs74429191	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	40421616	40421617	chr19:40421617:A:T	rs533891270	A	T	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	40592964	40592965	chr19:40592965:C:T	rs56013937	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr19	40655172	40655173	chr19:40655173:T:C	rs10407889	T	C	T	Hoxc9_MA0485.1	8	1	-	8.276448055348489	1.3744895452135295	GCCTGTAAATCCC
chr19	40655190	40655191	chr19:40655191:T:C	rs10408065	T	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr19	40715580	40715581	chr19:40715581:C:A	rs78004077	C	A	C	Hoxc9_MA0485.1	11	1	+	7.524808796936316	9.577798651835398	GCATATAAATCCC
chr19	40716357	40716358	chr19:40716358:T:G	rs75808986	T	G	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr19	40754925	40754926	chr19:40754926:C:T	rs2607416	C	T	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr19	40887229	40887230	chr19:40887230:A:G	rs28503746	A	G	a	Hoxc9_MA0485.1	0	1	-	7.343055190311589	7.110711532792221	TGTCATCAATCTG
chr19	40945670	40945671	chr19:40945671:A:G	rs4062238	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr19	40971729	40971730	chr19:40971730:C:G	rs146829868	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr19	40989849	40989850	chr19:40989850:T:C	rs2054675	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	41233668	41233669	chr19:41233669:C:T	rs77287588	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr19	41397563	41397564	chr19:41397564:C:T	rs576345541	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	41397598	41397599	chr19:41397599:T:C	chr19:41397599:T:C	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr19	41565994	41565995	chr19:41565995:A:C	rs28433747	A	C	-	Hoxc9_MA0485.1	5	1	-	8.51128164130783	1.6127386655882374	AGCCATCAATCCT
chr19	41621202	41621203	chr19:41621203:C:T	rs3848567	C	T	T	Hoxc9_MA0485.1	12	1	+	9.431680610858713	9.17768365709416	GGACATCAATCAC
chr19	41642381	41642382	chr19:41642382:T:A	rs2109072	T	A	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr19	41649446	41649447	chr19:41649447:C:G	rs4803494	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr19	41884573	41884574	chr19:41884574:C:A	rs112199053	C	A	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr19	41884604	41884605	chr19:41884605:A:C	chr19:41884605:A:C	A	C	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr19	41935986	41935987	chr19:41935987:C:T	rs151252124	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr19	42761602	42761603	chr19:42761603:A:G	rs778746198	A	G	a	Hoxc9_MA0485.1	4	1	-	7.14119399082128	5.67188255188822	GCCCTTAAATCTG
chr19	43561878	43561879	chr19:43561879:G:T	rs3213321	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr19	43785671	43785672	chr19:43785672:A:G	rs11669175	A	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	43794835	43794836	chr19:43794836:A:G	rs11083724	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	43809991	43809992	chr19:43809992:G:T	rs111397027	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr19	43810000	43810001	chr19:43810001:T:C	rs80139960	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr19	43998015	43998016	chr19:43998016:G:A	rs442220	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr19	44291137	44291138	chr19:44291138:C:T	rs2609874	C	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr19	44402062	44402063	chr19:44402063:A:C	rs12463008	A	C	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	44562796	44562797	chr19:44562797:A:G	rs12459712	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	44686890	44686891	chr19:44686891:A:G	rs4324248	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	44784911	44784912	chr19:44784912:T:A	rs116735164	T	A	T	Hoxc9_MA0485.1	4	1	-	7.223089171788302	3.554473929471703	CCCCATCAATCTA
chr19	44892072	44892073	chr19:44892073:A:G	rs2075649	A	G	.	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	44946026	44946027	chr19:44946027:T:G	rs2288911	T	G	G	Hoxc9_MA0485.1	9	1	+	7.482023313812013	0.593797499438379	CACTATAAATCCT
chr19	45020194	45020195	chr19:45020195:A:G	rs188161988	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr19	45020200	45020201	chr19:45020201:G:A	rs4803790	G	A	A	Hoxc9_MA0485.1	10	1	-	8.280339001627057	6.476503097318306	GAGAATAAATCAT
chr19	45103880	45103881	chr19:45103881:G:A	rs17562787	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr19	45305605	45305606	chr19:45305606:G:A	rs79989156	G	A	G	Hoxc9_MA0485.1	3	1	-	7.124956415535453	6.23670364251283	GCACGTCAATCAC
chr19	45331566	45331567	chr19:45331567:T:C	rs60152947	T	C	T	Hoxc9_MA0485.1	8	1	-	7.4428044736004155	0.5408459634654549	CGCAGTCAATCAG
chr19	45370658	45370659	chr19:45370659:A:G	rs113625921	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr19	45370683	45370684	chr19:45370684:G:C	rs3810366	G	C	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr19	45478556	45478557	chr19:45478557:G:T	rs6509214	G	T	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	45478559	45478560	chr19:45478560:G:C	rs569470649	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr19	45478561	45478562	chr19:45478562:C:T	rs138029530	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr19	45478581	45478582	chr19:45478582:T:C	rs7245548	T	C	T	Hoxc9_MA0485.1	6	1	-	7.4565048881181575	4.422299121608735	CGCCTTAAATCTT
chr19	45522129	45522130	chr19:45522130:G:A	rs2301284	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	45522141	45522142	chr19:45522142:G:C	rs2301285	G	C	G	Hoxc9_MA0485.1	3	1	-	8.409899338690252	2.8935028667045604	TGCCGTCAATCAG
chr19	45577212	45577213	chr19:45577213:C:G	rs79908108	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr19	46302999	46303000	chr19:46303000:T:C	rs16980431	T	C	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr19	46406225	46406226	chr19:46406226:A:G	rs10420969	A	G	g	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr19	46427443	46427444	chr19:46427444:A:G	rs406601	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr19	46473819	46473820	chr19:46473820:C:T	rs189464510	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr19	46499088	46499089	chr19:46499089:T:C	rs77480971	T	C	T	Hoxc9_MA0485.1	4	1	-	8.07043863246205	6.902674918470468	GCTCATAAATAAT
chr19	46576627	46576628	chr19:46576628:G:A	rs62136912	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr19	46614379	46614380	chr19:46614380:C:G	rs67291917	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr19	46631054	46631055	chr19:46631055:A:G	rs10420570	A	G	g	Hoxc9_MA0485.1	3	1	+	8.116738531765273	3.3350932673500537	GGCAGTAAATTTA
chr19	46670947	46670948	chr19:46670948:A:G	rs314658	A	G	A	Hoxc9_MA0485.1	11	1	-	8.927460407844725	7.732059938154666	TGCCATAAATATC
chr19	46670954	46670955	chr19:46670955:T:C	rs74354969	T	C	T	Hoxc9_MA0485.1	4	1	-	8.927460407844725	7.75969669385314	TGCCATAAATATC
chr19	46868358	46868359	chr19:46868359:G:A	rs425655	G	A	A	Hoxc9_MA0485.1	3	1	-	8.108145545475555	7.219892772452932	GACCATAAATTCC
chr19	46952057	46952058	chr19:46952058:A:G	rs311384	A	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	47107942	47107943	chr19:47107943:A:G	rs2279476	A	G	A	Hoxc9_MA0485.1	8	1	+	7.33207409996618	0.4301155898312202	CCCAATCAATCTC
chr19	47141500	47141501	chr19:47141501:G:A	rs111484931	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr19	47157414	47157415	chr19:47157415:C:A	chr19:47157415:C:A	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr19	47305349	47305350	chr19:47305350:T:G	rs757575871	T	G	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr19	47714681	47714682	chr19:47714682:C:T	rs2914442	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr19	47714687	47714688	chr19:47714688:A:C	rs6509334	A	C	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr19	47819342	47819343	chr19:47819343:A:G	rs34591395	A	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr19	47941431	47941432	chr19:47941432:A:T	rs1372056443	A	T	-	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr19	48333135	48333136	chr19:48333136:T:A	rs45545737	T	A	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr19	48421705	48421706	chr19:48421706:G:A	rs1654671	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr19	48785154	48785155	chr19:48785155:G:A	rs11670428	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	48790800	48790801	chr19:48790801:C:A	rs11881731	C	A	c	Hoxc9_MA0485.1	17	0	-	0	0	.
chr19	48795851	48795852	chr19:48795852:T:C	rs73587808	T	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr19	48964740	48964741	chr19:48964741:C:G	rs73577717	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr19	49085432	49085433	chr19:49085433:G:T	rs145436512	G	T	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr19	49085440	49085441	chr19:49085441:C:G	chr19:49085441:C:G	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr19	49085440	49085441	chr19:49085441:C:T	rs1055726664	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr19	49339428	49339429	chr19:49339429:C:T	rs118185621	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr19	49417547	49417548	chr19:49417548:A:G	rs17206868	A	G	A	Hoxc9_MA0485.1	4	1	+	7.366205086362241	6.198441372370657	CTCAATAAATCCC
chr19	49453016	49453017	chr19:49453017:C:G	rs7259076	C	G	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	49453032	49453033	chr19:49453033:C:T	rs3760669	C	T	T	Hoxc9_MA0485.1	3	1	+	6.949681877101472	6.06142910407885	CCTCATAAATCCG
chr19	49833581	49833582	chr19:49833582:T:C	rs10518267	T	C	T	Hoxc9_MA0485.1	3	1	+	6.983087028940758	7.871339801963381	GGCTGCAAATCAC
chr19	49849642	49849643	chr19:49849643:T:A	rs11672587	T	A	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	49897874	49897875	chr19:49897875:C:T	rs568724716	C	T	C	Hoxc9_MA0485.1	0	1	+	9.490455412097928	9.722799069617295	CGCAGTAAATCAA
chr19	49897906	49897907	chr19:49897907:C:A	rs183544882	C	A	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr19	49926268	49926269	chr19:49926269:C:T	rs10420032	C	T	C	Hoxc9_MA0485.1	2	1	+	8.276448055348489	6.899429578187265	GCCTGTAAATCCC
chr19	49954088	49954089	chr19:49954089:C:T	rs10420344	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	50347158	50347159	chr19:50347159:T:C	rs56079106	T	C	T	Hoxc9_MA0485.1	4	1	-	7.245863645930338	6.078099931938753	CTCAATCAATCAC
chr19	50376193	50376194	chr19:50376194:G:C	chr19:50376194:G:C	G	C	G	Hoxc9_MA0485.1	12	1	+	8.082379105696221	8.8004348846111	TGCCTTAAATCAG
chr19	50705534	50705535	chr19:50705535:G:A	rs143158587	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr19	50861610	50861611	chr19:50861611:C:T	rs55887816	C	T	c	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr19	50920869	50920870	chr19:50920870:G:A	rs6509501	G	A	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr19	51081152	51081153	chr19:51081153:G:A	rs17658926	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	51081340	51081341	chr19:51081341:T:G	rs10500304	T	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr19	51256270	51256271	chr19:51256271:T:C	rs10402797	T	C	t	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	51350887	51350888	chr19:51350888:A:G	chr19:51350888:A:G	A	G	A	Hoxc9_MA0485.1	7	1	+	10.053602457663947	3.1493733884583692	AGCCATAAATAAT
chr19	51521449	51521450	chr19:51521450:A:G	rs2902665	A	G	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr19	51599349	51599350	chr19:51599350:C:G	rs55712999	C	G	C	Hoxc9_MA0485.1	10	1	+	8.830925348954224	4.029854541206947	CACAATAAATCTT
chr19	51664022	51664023	chr19:51664023:C:T	rs374156533	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr19	51676700	51676701	chr19:51676701:G:C	rs73054824	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr19	51676703	51676704	chr19:51676704:T:G	rs34132222	T	G	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr19	51697534	51697535	chr19:51697535:A:T	rs4802840	A	T	t	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	51983590	51983591	chr19:51983591:C:T	rs8110287	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr19	52027528	52027529	chr19:52027529:A:G	rs189242969	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr19	52176377	52176378	chr19:52176378:A:G	rs79036922	A	G	A	Hoxc9_MA0485.1	3	1	-	8.91139663604907	9.799649409071693	ACCTATAAATCCC
chr19	52189518	52189519	chr19:52189519:G:A	rs111939795	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr19	52203737	52203738	chr19:52203738:T:C	rs4802902	T	C	C	Hoxc9_MA0485.1	4	1	-	8.35437051282494	7.186606798833357	AGCTATCAATCTG
chr19	52370485	52370486	chr19:52370486:G:C	rs527372571	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr19	52529536	52529537	chr19:52529537:A:G	rs441850	A	G	N	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	52584368	52584369	chr19:52584369:T:C	rs587238	T	C	N	Hoxc9_MA0485.1	9	1	+	7.432711919600141	0.5444861052265089	GCCTGTAAATCCA
chr19	52646935	52646936	chr19:52646936:T:G	rs58695109	T	G	t	Hoxc9_MA0485.1	7	1	-	9.808459429356784	2.9042303601512063	GACAGTAAATCAT
chr19	52737553	52737554	chr19:52737554:A:C	rs10406850	A	C	a	Hoxc9_MA0485.1	15	0	+	0	0	.
chr19	52763835	52763836	chr19:52763836:T:C	rs28631564	T	C	t	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr19	52779617	52779618	chr19:52779618:C:A	rs13346826	C	A	N	Hoxc9_MA0485.1	23	0	+	0	0	.
chr19	52859451	52859452	chr19:52859452:G:A	rs7258677	G	A	N	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr19	52925796	52925797	chr19:52925797:C:T	rs12609561	C	T	N	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr19	52928009	52928010	chr19:52928010:C:T	rs7250706	C	T	N	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr19	52936697	52936698	chr19:52936698:T:C	rs10402003	T	C	t	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr19	52938989	52938990	chr19:52938990:A:G	rs75367093	A	G	a	Hoxc9_MA0485.1	27	0	+	0	0	.
chr19	52938991	52938992	chr19:52938992:G:A	chr19:52938992:G:A	G	A	g	Hoxc9_MA0485.1	29	0	+	0	0	.
chr19	53255726	53255727	chr19:53255727:T:C	rs2965246	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	53366923	53366924	chr19:53366924:A:G	rs8107617	A	G	a	Hoxc9_MA0485.1	24	0	-	0	0	.
chr19	53366926	53366927	chr19:53366927:G:C	rs8107918	G	C	g	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	53545254	53545255	chr19:53545255:A:G	rs186807287	A	G	a	Hoxc9_MA0485.1	15	0	+	0	0	.
chr19	53576812	53576813	chr19:53576813:T:C	rs61744130	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr19	53757412	53757413	chr19:53757413:A:T	rs305945	A	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	53758630	53758631	chr19:53758631:C:T	rs675672	C	T	T	Hoxc9_MA0485.1	0	1	-	9.471848525038547	8.939033391747545	GCCTGTAAATCTC
chr19	53774083	53774084	chr19:53774084:T:A	rs12978941	T	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr19	53877479	53877480	chr19:53877480:G:A	rs144472591	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr19	53877483	53877484	chr19:53877484:A:G	rs10413674	A	G	a	Hoxc9_MA0485.1	11	1	-	8.192709200274255	6.997308730584197	TGCAATAAATATC
chr19	53991571	53991572	chr19:53991572:C:G	rs544647385	C	G	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr19	54210446	54210447	chr19:54210447:C:T	rs532178638	C	T	c	Hoxc9_MA0485.1	16	0	-	0	0	.
chr19	54274139	54274140	chr19:54274140:G:C	rs557629234	G	C	g	Hoxc9_MA0485.1	10	1	-	9.30759445947759	4.506523651730315	AGTCATAAATCCT
chr19	54365557	54365558	chr19:54365558:G:A	rs2112821	G	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr19	54463907	54463908	chr19:54463908:T:C	rs554343800	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr19	54463915	54463916	chr19:54463916:C:T	chr19:54463916:C:T	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	54463948	54463949	chr19:54463949:G:T	rs540036192	G	T	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr19	54463969	54463970	chr19:54463970:G:T	rs540550517	G	T	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr19	54464002	54464003	chr19:54464003:C:G	chr19:54464003:C:G	C	G	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr19	54464137	54464138	chr19:54464138:G:T	rs374038754	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	54464140	54464141	chr19:54464141:T:C	rs76692276	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr19	54464177	54464178	chr19:54464178:G:C	rs77488192	G	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr19	54464216	54464217	chr19:54464217:G:C	chr19:54464217:G:C	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr19	54464244	54464245	chr19:54464245:G:A	rs570944397	G	A	G	Hoxc9_MA0485.1	12	1	-	8.765472577575435	8.511475623810883	ACACGTAAATCAC
chr19	54464253	54464254	chr19:54464254:G:C	rs530236415	G	C	G	Hoxc9_MA0485.1	3	1	-	8.765472577575435	3.249076105589743	ACACGTAAATCAC
chr19	54464294	54464295	chr19:54464295:C:A	rs539622019	C	A	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr19	54464346	54464347	chr19:54464347:T:C	rs548570918	T	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr19	54464397	54464398	chr19:54464398:C:G	rs527563002	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	54518835	54518836	chr19:54518836:G:A	rs8106645	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr19	54518864	54518865	chr19:54518865:T:A	rs73070130	T	A	T	Hoxc9_MA0485.1	1	1	-	7.424997631802703	6.9016808851362255	GAAAGTAAATCAG
chr19	54572498	54572499	chr19:54572499:G:A	rs3760856	G	A	G	Hoxc9_MA0485.1	4	1	+	7.233438773785022	8.401202487776604	GGGCGTCAATCAT
chr19	54713282	54713283	chr19:54713283:A:G	rs2296370	A	G	A	Hoxc9_MA0485.1	8	1	+	8.179812740389659	1.2778542302547011	GGCAATGAATCTG
chr19	54723882	54723883	chr19:54723883:A:G	rs35163360	A	G	g	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr19	54810141	54810142	chr19:54810142:A:G	rs604999	A	G	.	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr19	54822349	54822350	chr19:54822350:T:C	rs594307	T	C	.	Hoxc9_MA0485.1	26	0	+	0	0	.
chr19	54875401	54875402	chr19:54875402:C:G	rs77887839	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr19	55082812	55082813	chr19:55082813:C:T	rs117209293	C	T	C	Hoxc9_MA0485.1	0	1	-	7.367194820142055	6.834379686851053	GGTCTTAAATCTT
chr19	55446367	55446368	chr19:55446368:T:C	rs1260754705	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr19	55499132	55499133	chr19:55499133:A:G	rs7258554	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr19	55958629	55958630	chr19:55958630:G:A	rs383216	G	A	G	Hoxc9_MA0485.1	3	1	-	9.695225875084091	8.806973102061468	GGCCGTAAATTTC
chr19	56134712	56134713	chr19:56134713:A:C	rs2631627	A	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr19	56369374	56369375	chr19:56369375:G:C	rs12972381	G	C	G	Hoxc9_MA0485.1	10	1	-	8.010612704545085	3.209541896797807	AGATATCAATCAC
chr19	56420302	56420303	chr19:56420303:C:T	rs917650	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr19	56648993	56648994	chr19:56648994:A:G	rs12608514	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr19	56715577	56715578	chr19:56715578:T:C	rs62133213	T	C	C	Hoxc9_MA0485.1	11	1	-	7.852750360765396	3.4402169618970273	GGACATGAATCAG
chr19	56715594	56715595	chr19:56715595:A:G	rs59324597	A	G	a	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr19	56884625	56884626	chr19:56884626:G:T	rs10402304	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr19	56884637	56884638	chr19:56884638:T:C	rs1321288537	T	C	T	Hoxc9_MA0485.1	4	1	-	9.165349684641322	7.997585970649738	AGCTATAAATAAT
chr19	56900418	56900419	chr19:56900419:C:T	rs77949882	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr19	56905824	56905825	chr19:56905825:C:T	rs116046069	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr19	57193147	57193148	chr19:57193148:T:C	rs10417807	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr19	57202446	57202447	chr19:57202447:T:C	rs7259268	T	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr19	57227878	57227879	chr19:57227879:A:G	rs2361128	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr19	57664947	57664948	chr19:57664948:C:T	rs760739743	C	T	c	Hoxc9_MA0485.1	27	0	-	0	0	.
chr19	57816748	57816749	chr19:57816749:A:G	rs148728323	A	G	.	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	58177062	58177063	chr19:58177063:A:G	rs12977929	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr19	58311829	58311830	chr19:58311830:G:A	rs58371330	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr19	58311854	58311855	chr19:58311855:T:C	rs61468392	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr19	58326455	58326456	chr19:58326456:G:A	rs186302697	G	A	G	Hoxc9_MA0485.1	10	1	-	8.325945715588292	6.522109811279541	AGAAGTAAATCAA
chr19	58381304	58381305	chr19:58381305:T:C	rs8102402	T	C	c	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr19	58381316	58381317	chr19:58381317:C:G	rs75938324	C	G	c	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr19	58585016	58585017	chr19:58585017:C:T	rs112047932	C	T	c	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	25805	25806	chr2:25806:G:T	rs6548217	G	T	.	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr2	795330	795331	chr2:795331:C:T	rs6744157	C	T	C	Hoxc9_MA0485.1	6	1	-	8.351085426855525	11.385291193364944	AGCTATGAATCAG
chr2	795920	795921	chr2:795921:C:T	rs12714420	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	824752	824753	chr2:824753:T:C	rs12467306	T	C	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	858067	858068	chr2:858068:C:A	rs34785661	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	858108	858109	chr2:858109:T:C	rs6716510	T	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	918328	918329	chr2:918329:T:C	rs4854428	T	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	918360	918361	chr2:918361:A:T	rs4854429	A	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	1052751	1052752	chr2:1052752:A:G	rs78957789	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	1052775	1052776	chr2:1052776:G:A	rs4514907	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	1067817	1067818	chr2:1067818:C:T	rs34787379	C	T	C	Hoxc9_MA0485.1	2	1	+	10.430878596214638	9.053860119053414	ACCCGTAAATCAT
chr2	1067844	1067845	chr2:1067845:G:A	rs35546657	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	1074262	1074263	chr2:1074263:C:T	rs4586665	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	1131171	1131172	chr2:1131172:T:C	rs72766713	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	1172128	1172129	chr2:1172129:T:C	rs4346415	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	1418599	1418600	chr2:1418600:T:C	rs10207656	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	1448720	1448721	chr2:1448721:G:A	rs13410529	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	1451366	1451367	chr2:1451367:G:A	rs28909395	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	1455433	1455434	chr2:1455434:C:T	rs10205420	C	T	C	Hoxc9_MA0485.1	0	1	+	8.924346061908347	9.156689719427716	CCACATAAATCAT
chr2	1688596	1688597	chr2:1688597:T:C	rs13432234	T	C	.	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	1688626	1688627	chr2:1688627:T:C	rs13432222	T	C	.	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	1741553	1741554	chr2:1741554:A:G	rs4853759	A	G	A	Hoxc9_MA0485.1	12	1	+	7.662552246915616	7.788232603749086	AGCCACAAATCAA
chr2	1748410	1748411	chr2:1748411:T:A	rs139248776	T	A	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	1748456	1748457	chr2:1748457:A:G	rs2382558	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	1850841	1850842	chr2:1850842:T:C	rs11685645	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	2245780	2245781	chr2:2245781:T:C	rs9808093	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	2484066	2484067	chr2:2484067:A:G	rs4268949	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	2523868	2523869	chr2:2523869:T:C	rs6720427	T	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	2561928	2561929	chr2:2561929:C:T	rs528556638	C	T	C	Hoxc9_MA0485.1	0	1	+	7.756388365413713	7.988732022933082	CGCCATCAATCCT
chr2	2577076	2577077	chr2:2577077:G:A	rs7590585	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	2577102	2577103	chr2:2577103:A:G	rs6548093	A	G	A	Hoxc9_MA0485.1	0	1	-	8.13553428708855	7.903190629569182	TACTGTAAATCAG
chr2	2577106	2577107	chr2:2577107:G:A	rs145010723	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	2881713	2881714	chr2:2881714:G:A	rs117238406	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	2919100	2919101	chr2:2919101:A:T	rs146487035	A	T	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	2992581	2992582	chr2:2992582:G:A	rs1448625	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	3146909	3146910	chr2:3146910:A:G	rs112229794	A	G	-	Hoxc9_MA0485.1	7	1	+	7.547396215584446	0.6431671463788684	CCTCATCAATCAC
chr2	3146913	3146914	chr2:3146914:A:G	rs762811446	A	G	-	Hoxc9_MA0485.1	11	1	+	7.547396215584446	3.134862816716078	CCTCATCAATCAC
chr2	3313645	3313646	chr2:3313646:C:T	rs73913313	C	T	C	Hoxc9_MA0485.1	0	1	-	9.131000680304702	8.5981855470137	GGCTATAAATTTA
chr2	3467142	3467143	chr2:3467143:G:A	rs73133041	G	A	G	Hoxc9_MA0485.1	12	1	-	7.159915494555542	6.905918540790991	GGGCTTAAATCAC
chr2	3523750	3523751	chr2:3523751:A:G	rs10192909	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	3614469	3614470	chr2:3614470:C:T	rs1367276	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	3644907	3644908	chr2:3644908:C:G	rs934292	C	G	C	Hoxc9_MA0485.1	0	1	-	8.1277275595572	6.840019150372078	GGTAATCAATCTT
chr2	3868473	3868474	chr2:3868474:C:T	rs13014469	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	4003137	4003138	chr2:4003138:T:C	rs6542670	T	C	C	Hoxc9_MA0485.1	4	1	-	8.063540221567234	6.89577650757565	CCCCATGAATCAC
chr2	4071227	4071228	chr2:4071228:A:G	rs76261967	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	4071240	4071241	chr2:4071241:A:T	rs78559964	A	T	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	4139769	4139770	chr2:4139770:G:T	rs2314223	G	T	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	4284112	4284113	chr2:4284113:T:G	rs7581666	T	G	T	Hoxc9_MA0485.1	9	1	+	9.441921682762048	2.5536958683884166	AGCTATAAATTTC
chr2	4370653	4370654	chr2:4370654:A:G	rs73912233	A	G	A	Hoxc9_MA0485.1	11	1	+	8.776927671670567	4.364394272802197	CTTCATAAATCAC
chr2	4871333	4871334	chr2:4871334:C:T	rs12477026	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	4874512	4874513	chr2:4874513:G:C	rs62108836	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	4978682	4978683	chr2:4978683:T:A	rs140741164	T	A	T	Hoxc9_MA0485.1	6	1	-	8.450173948019554	4.9214494824820365	CCCCATAAATTAA
chr2	5249853	5249854	chr2:5249854:A:G	rs16863472	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	5254969	5254970	chr2:5254970:G:A	rs11889641	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	5254970	5254971	chr2:5254971:A:C	rs1453763	A	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	5288513	5288514	chr2:5288514:T:C	rs12185660	T	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	5440300	5440301	chr2:5440301:C:T	rs792081	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	5613004	5613005	chr2:5613005:T:C	rs6761918	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	5688981	5688982	chr2:5688982:A:G	rs12052773	A	G	A	Hoxc9_MA0485.1	5	1	-	8.211398164012277	3.726086801373791	AGCCTTAAATCTT
chr2	5742430	5742431	chr2:5742431:G:A	rs12053114	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	5803369	5803370	chr2:5803370:C:T	rs2564081	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	5846128	5846129	chr2:5846129:G:A	rs1346610	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	5849817	5849818	chr2:5849818:C:T	chr2:5849818:C:T	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	5849826	5849827	chr2:5849827:G:C	rs11900424	G	C	G	Hoxc9_MA0485.1	0	1	+	10.870260698619227	9.582552289434105	GGAAATAAATCAC
chr2	5911858	5911859	chr2:5911859:A:G	rs533494174	A	G	a	Hoxc9_MA0485.1	9	1	-	8.271222121258655	1.3829963068850244	GCCAATAAATTTG
chr2	6024889	6024890	chr2:6024890:T:C	rs16864588	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	6072945	6072946	chr2:6072946:G:A	rs111659123	G	A	A	Hoxc9_MA0485.1	10	1	-	8.054458470943056	6.250622566634305	GGGTGTAAATCAG
chr2	6345694	6345695	chr2:6345695:A:G	rs16865042	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	6424277	6424278	chr2:6424278:G:A	rs6745308	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	6450444	6450445	chr2:6450445:A:C	rs56325563	A	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	6506820	6506821	chr2:6506821:C:T	rs306182	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	6533573	6533574	chr2:6533574:C:T	rs16865315	C	T	C	Hoxc9_MA0485.1	4	1	-	8.317959383837387	9.485723097828972	TGTTGTAAATCAG
chr2	6958463	6958464	chr2:6958464:G:A	rs115547989	G	A	A	Hoxc9_MA0485.1	3	1	-	7.643057128988846	6.754804355966223	CACCATGAATCAC
chr2	7027021	7027022	chr2:7027022:C:G	rs416416	C	G	G	Hoxc9_MA0485.1	4	1	-	9.924267935774889	5.9541049685168135	TGTCGTAAATCAC
chr2	7027041	7027042	chr2:7027042:G:A	rs192589545	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	7057857	7057858	chr2:7057858:A:G	rs432588	A	G	G	Hoxc9_MA0485.1	11	1	-	8.883280194030059	7.68787972434	ACTAATAAATCTC
chr2	7180433	7180434	chr2:7180434:G:A	rs11677869	G	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	7964193	7964194	chr2:7964194:G:A	rs74910875	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	8058947	8058948	chr2:8058948:G:A	rs13418810	G	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	8298828	8298829	chr2:8298829:A:G	rs16866666	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	8488044	8488045	chr2:8488045:T:G	rs73912822	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	8697504	8697505	chr2:8697505:A:T	rs12472367	A	T	A	Hoxc9_MA0485.1	9	1	-	8.411991645314421	4.5843490768143935	CATTATAAATCAC
chr2	8807286	8807287	chr2:8807287:T:C	rs1212674436	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	8848529	8848530	chr2:8848530:G:A	rs6746864	G	A	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	8891554	8891555	chr2:8891555:A:G	rs13405832	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	9144465	9144466	chr2:9144466:T:C	rs140851814	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	9175000	9175001	chr2:9175001:T:A	rs148896660	T	A	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	9337049	9337050	chr2:9337050:C:T	rs78897974	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	9400719	9400720	chr2:9400720:C:T	rs10204214	C	T	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	9539405	9539406	chr2:9539406:C:T	rs185346465	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	9696384	9696385	chr2:9696385:T:C	rs12476176	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	9770061	9770062	chr2:9770062:G:C	rs13008842	G	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	9912750	9912751	chr2:9912751:A:G	rs2052947	A	G	A	Hoxc9_MA0485.1	9	1	-	7.870651063644334	0.9824252492707006	TGGAGTAAATCAC
chr2	9954312	9954313	chr2:9954313:C:A	rs3828260	C	A	C	Hoxc9_MA0485.1	0	1	-	9.065218681920834	8.00985393025508	GACTGTAAATCAA
chr2	9969151	9969152	chr2:9969152:T:C	rs731169	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	10124898	10124899	chr2:10124899:G:A	rs72544297	G	A	G	Hoxc9_MA0485.1	10	1	-	9.513544306447654	7.7097084021389035	TGTAATAAATCAA
chr2	10124899	10124900	chr2:10124900:A:G	rs202195880	A	G	A	Hoxc9_MA0485.1	9	1	-	9.513544306447654	2.625318492074023	TGTAATAAATCAA
chr2	10172415	10172416	chr2:10172416:C:T	rs75461262	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	10413750	10413751	chr2:10413751:A:G	rs3755262	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	10413771	10413772	chr2:10413772:C:T	rs3755261	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	10471482	10471483	chr2:10471483:A:C	rs818171	A	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	10689808	10689809	chr2:10689809:T:C	rs757440327	T	C	t	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	10881209	10881210	chr2:10881210:T:C	rs67751871	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	10947365	10947366	chr2:10947366:T:C	rs143789119	T	C	T	Hoxc9_MA0485.1	5	1	+	7.942017376838948	3.4567060142004613	GACAATGAATCAT
chr2	10981293	10981294	chr2:10981294:C:T	rs72781493	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	10987578	10987579	chr2:10987579:T:C	rs7573335	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	11042285	11042286	chr2:11042286:G:A	rs78711824	G	A	G	Hoxc9_MA0485.1	2	1	-	8.62124640848406	7.244227931322835	CACTGTAAATCAC
chr2	11154491	11154492	chr2:11154492:T:A	rs73175632	T	A	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	11234340	11234341	chr2:11234341:C:A	rs1201160729	C	A	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	11362954	11362955	chr2:11362955:T:C	rs10189756	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	11395396	11395397	chr2:11395397:G:T	rs4260216	G	T	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	11478320	11478321	chr2:11478321:T:C	rs534030997	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	11557156	11557157	chr2:11557157:G:A	rs56237365	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	11568706	11568707	chr2:11568707:G:C	rs9287732	G	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	11622243	11622244	chr2:11622244:C:A	rs56335861	C	A	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	11695732	11695733	chr2:11695733:G:A	rs4517949	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	11777778	11777779	chr2:11777779:T:C	rs2278513	T	C	T	Hoxc9_MA0485.1	11	1	-	10.199015679658674	5.786482280790305	AGCAATAAATTAT
chr2	11849537	11849538	chr2:11849538:T:G	rs7578171	T	G	T	Hoxc9_MA0485.1	7	1	-	7.441077468116836	0.5368483989112577	GCCCATCAATCCG
chr2	12071245	12071246	chr2:12071246:C:T	rs6723833	C	T	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	12150019	12150020	chr2:12150020:T:G	rs6752330	T	G	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	12287564	12287565	chr2:12287565:A:G	rs58613189	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	12318046	12318047	chr2:12318047:T:A	rs1231187438	T	A	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	12348686	12348687	chr2:12348687:T:C	rs12612952	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	12439052	12439053	chr2:12439053:G:A	rs10211429	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	12466765	12466766	chr2:12466766:T:C	rs10196259	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	12671970	12671971	chr2:12671971:A:G	rs33974122	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	12716812	12716813	chr2:12716813:C:T	rs183249684	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	12716817	12716818	chr2:12716818:C:A	rs927477480	C	A	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	12848634	12848635	chr2:12848635:T:G	rs1879542	T	G	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	12862690	12862691	chr2:12862691:A:G	rs73914188	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	12933129	12933130	chr2:12933130:T:G	rs114037276	T	G	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	12971361	12971362	chr2:12971362:G:A	rs10165801	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	13021712	13021713	chr2:13021713:C:T	rs6750714	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	13496677	13496678	chr2:13496678:T:G	rs10929856	T	G	G	Hoxc9_MA0485.1	9	1	+	9.447457109623276	2.5592312952496434	GCCCATAAATAAT
chr2	13554037	13554038	chr2:13554038:T:G	rs150812089	T	G	T	Hoxc9_MA0485.1	0	1	+	8.04188692532205	9.097251676987804	TCCCATGAATCAT
chr2	14122236	14122237	chr2:14122237:A:G	rs11679221	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	14872973	14872974	chr2:14872974:C:T	rs148818642	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	14872976	14872977	chr2:14872977:G:A	rs113829819	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	15003774	15003775	chr2:15003775:G:T	rs72771027	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	15149332	15149333	chr2:15149333:C:G	rs57124029	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	15264304	15264305	chr2:15264305:C:G	rs75581800	C	G	C	Hoxc9_MA0485.1	1	1	-	7.66092791088436	6.521967429552686	GGGTGTAAATCTT
chr2	15470525	15470526	chr2:15470526:A:C	rs4668911	A	C	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	15637304	15637305	chr2:15637305:G:A	rs807629	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	15986154	15986155	chr2:15986155:C:T	rs11684896	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	16126080	16126081	chr2:16126081:A:G	rs144460588	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	16194673	16194674	chr2:16194674:C:G	rs140336001	C	G	C	Hoxc9_MA0485.1	12	1	+	7.730104805312954	7.012049026398077	GGCAGTGAATCTC
chr2	16388407	16388408	chr2:16388408:G:C	chr2:16388408:G:C	G	C	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	16426057	16426058	chr2:16426058:C:G	rs764828224	C	G	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	16701820	16701821	chr2:16701821:G:A	rs1643206	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	16769885	16769886	chr2:16769886:C:A	rs10490436	C	A	C	Hoxc9_MA0485.1	3	1	+	8.585490236250735	7.850739028680267	GACCATAAATTTG
chr2	16933227	16933228	chr2:16933228:C:G	rs9306903	C	G	C	Hoxc9_MA0485.1	6	1	-	7.355120374050069	8.215994845228504	GACCATGAATCTG
chr2	17056542	17056543	chr2:17056543:C:T	rs77577075	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	17980048	17980049	chr2:17980049:C:A	rs74567190	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	18058069	18058070	chr2:18058070:A:G	rs62133575	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	18210505	18210506	chr2:18210506:T:G	chr2:18210506:T:G	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	18357769	18357770	chr2:18357770:C:T	rs7562205	C	T	T	Hoxc9_MA0485.1	3	1	+	9.034198791693168	8.145946018670546	TGTCATAAATTAT
chr2	18451302	18451303	chr2:18451303:C:T	rs6760491	C	T	T	Hoxc9_MA0485.1	1	1	-	9.929719660744693	8.370276086834632	CGCCATAAATCCT
chr2	18451318	18451319	chr2:18451319:A:C	rs6718130	A	C	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	18479995	18479996	chr2:18479996:G:A	rs138305426	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	18526983	18526984	chr2:18526984:A:G	rs11679390	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	18586117	18586118	chr2:18586118:G:T	rs11096544	G	T	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	18626519	18626520	chr2:18626520:A:G	rs16985346	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	18703519	18703520	chr2:18703520:G:A	rs16985453	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	19051468	19051469	chr2:19051469:C:T	rs76081862	C	T	C	Hoxc9_MA0485.1	10	1	+	8.33764168130558	6.533805776996828	CCCAGTAAATCTC
chr2	19471785	19471786	chr2:19471786:G:A	rs62126599	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	19492402	19492403	chr2:19492403:C:T	rs17758325	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	19541395	19541396	chr2:19541396:T:G	chr2:19541396:T:G	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	19653469	19653470	chr2:19653470:C:T	rs62111834	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	19675509	19675510	chr2:19675510:G:A	rs72787935	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	19753073	19753074	chr2:19753074:C:A	rs12476841	C	A	.	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	19755854	19755855	chr2:19755855:A:G	rs10178683	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	19819375	19819376	chr2:19819376:C:T	rs10192343	C	T	C	Hoxc9_MA0485.1	0	1	+	7.646342214958262	7.878685872477629	CACCATCAATCTC
chr2	19888222	19888223	chr2:19888223:T:G	rs16987205	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	19888227	19888228	chr2:19888228:T:G	rs72779347	T	G	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	20027436	20027437	chr2:20027437:A:G	rs1191817	A	G	G	Hoxc9_MA0485.1	10	1	-	10.161135400374636	11.964971304683388	GACCATAAATTAC
chr2	20275684	20275685	chr2:20275685:T:C	rs10856797	T	C	C	Hoxc9_MA0485.1	9	1	+	9.79480640589747	2.9065805915238383	ACCCATAAATTAT
chr2	20443437	20443438	chr2:20443438:G:C	rs116695385	G	C	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	20450202	20450203	chr2:20450203:A:G	rs548196012	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	20450226	20450227	chr2:20450227:G:T	rs76304010	G	T	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	20450233	20450234	chr2:20450234:C:T	rs79479426	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr2	20452208	20452209	chr2:20452209:C:T	rs1290764002	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	21643597	21643598	chr2:21643598:G:A	rs6737021	G	A	G	Hoxc9_MA0485.1	0	1	+	9.439368766165849	8.906553632874846	GCCTATAAATTAT
chr2	21646342	21646343	chr2:21646343:T:A	rs79153592	T	A	T	Hoxc9_MA0485.1	11	1	-	9.863167214698093	9.00557782948907	GTCAATAAATCAA
chr2	22441909	22441910	chr2:22441910:G:T	rs13031296	G	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	22663492	22663493	chr2:22663493:A:G	rs11687600	A	G	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	23107191	23107192	chr2:23107192:C:G	rs55803151	C	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	23135944	23135945	chr2:23135945:C:T	rs191339008	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	23213386	23213387	chr2:23213387:T:C	rs75323550	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	23342386	23342387	chr2:23342387:T:C	rs1465832	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	23354101	23354102	chr2:23354102:G:T	rs11678409	G	T	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	23355255	23355256	chr2:23355256:C:T	rs13020985	C	T	C	Hoxc9_MA0485.1	1	1	-	8.695116750325356	7.135673176415294	CGCCATAAATATC
chr2	23355256	23355257	chr2:23355257:G:A	rs2723136	G	A	G	Hoxc9_MA0485.1	0	1	-	8.695116750325356	8.927460407844725	CGCCATAAATATC
chr2	23367848	23367849	chr2:23367849:T:C	chr2:23367849:T:C	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	23481261	23481262	chr2:23481262:C:G	rs1465674	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	23493284	23493285	chr2:23493285:G:A	rs9808020	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	23498274	23498275	chr2:23498275:A:T	rs1368081	A	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	23584461	23584462	chr2:23584462:C:T	rs188244237	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	23891990	23891991	chr2:23891991:T:C	rs112877966	T	C	t	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	24126347	24126348	chr2:24126348:G:T	rs13418279	G	T	T	Hoxc9_MA0485.1	10	1	-	9.456799566532288	6.772799232658339	TACAATAAATCAG
chr2	25587565	25587566	chr2:25587566:C:G	rs149954692	C	G	C	Hoxc9_MA0485.1	3	1	+	7.720233199826581	2.2038367278408884	GCTCATGAATCAT
chr2	25587577	25587578	chr2:25587578:G:T	rs114232607	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	25587586	25587587	chr2:25587587:C:A	rs145126606	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	25587590	25587591	chr2:25587591:G:C	chr2:25587591:G:C	G	C	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	25916505	25916506	chr2:25916506:C:T	rs56354374	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	26035686	26035687	chr2:26035687:C:T	rs887878515	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	26036018	26036019	chr2:26036019:A:G	rs556578797	A	G	A	Hoxc9_MA0485.1	4	1	+	8.430606360248698	7.262842646257114	TGTCATAAATTTC
chr2	26121917	26121918	chr2:26121918:G:A	rs11126375	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	26162918	26162919	chr2:26162919:T:C	rs1025543	T	C	T	Hoxc9_MA0485.1	4	1	-	8.439259780342132	7.271496066350548	GAATATAAATCAG
chr2	26670991	26670992	chr2:26670992:T:C	rs114195255	T	C	T	Hoxc9_MA0485.1	5	1	+	7.2982587758532755	2.812947413214789	GCCCATGAATCCC
chr2	27532173	27532174	chr2:27532174:T:C	rs143536124	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	27771553	27771554	chr2:27771554:C:A	rs188187384	C	A	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	27922445	27922446	chr2:27922446:A:G	rs72810585	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	27959033	27959034	chr2:27959034:G:C	rs1506537	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	28095012	28095013	chr2:28095013:T:G	rs72814441	T	G	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	28269742	28269743	chr2:28269743:C:T	rs55960107	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	28275949	28275950	chr2:28275950:T:G	rs56069215	T	G	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	28414713	28414714	chr2:28414714:C:T	rs780388934	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	28439705	28439706	chr2:28439706:A:G	rs28740870	A	G	A	Hoxc9_MA0485.1	9	1	-	8.054879057230975	1.166653242857341	AGCAGTGAATCAC
chr2	28537217	28537218	chr2:28537218:A:G	rs6735724	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	28596798	28596799	chr2:28596799:C:G	rs144636649	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	28596806	28596807	chr2:28596807:C:A	rs75265646	C	A	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	28695344	28695345	chr2:28695345:T:C	rs137889023	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	28803414	28803415	chr2:28803415:T:C	rs138970777	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	29334936	29334937	chr2:29334937:T:G	rs151246061	T	G	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	29370403	29370404	chr2:29370404:G:C	rs10174743	G	C	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	29450740	29450741	chr2:29450741:T:C	rs11127225	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	29463078	29463079	chr2:29463079:C:T	rs6754936	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	29463093	29463094	chr2:29463094:C:T	rs68010618	C	T	T	Hoxc9_MA0485.1	11	1	+	7.906217261684307	9.101617731374365	CACCATAAATCCG
chr2	29479569	29479570	chr2:29479570:T:C	rs3885975	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	29482924	29482925	chr2:29482925:T:C	rs78010768	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	29655090	29655091	chr2:29655091:T:C	rs4666267	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	29990402	29990403	chr2:29990403:C:T	rs141720867	C	T	T	Hoxc9_MA0485.1	3	1	+	8.663827661617479	7.775574888594856	TGACGTAAATCAG
chr2	30300981	30300982	chr2:30300982:A:C	rs11127265	A	C	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	30413094	30413095	chr2:30413095:T:G	rs829603	T	G	G	Hoxc9_MA0485.1	12	1	+	11.480301965592675	11.016243140442349	TGCAATAAATCAT
chr2	30636585	30636586	chr2:30636586:A:C	rs10469987	A	C	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	30734144	30734145	chr2:30734145:G:A	rs111432463	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	30737250	30737251	chr2:30737251:A:G	rs78306826	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	30798660	30798661	chr2:30798661:T:G	chr2:30798661:T:G	T	G	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	30979898	30979899	chr2:30979899:G:T	rs73923320	G	T	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	31086876	31086877	chr2:31086877:T:A	rs11692265	T	A	A	Hoxc9_MA0485.1	12	1	+	8.03657368845984	7.446834506476044	GGTCATAAATTCT
chr2	31204005	31204006	chr2:31204006:A:C	rs4952059	A	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	31204865	31204866	chr2:31204866:G:A	rs76016915	G	A	g	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	31204884	31204885	chr2:31204885:T:G	chr2:31204885:T:G	T	G	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	31287819	31287820	chr2:31287820:C:T	rs114294488	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	31289029	31289030	chr2:31289030:T:G	rs684967	T	G	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	31961094	31961095	chr2:31961095:G:A	rs78594448	G	A	G	Hoxc9_MA0485.1	0	1	+	8.276448055348489	7.743632922057486	GCCTGTAAATCCC
chr2	32135656	32135657	chr2:32135657:T:C	rs115440025	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	32135678	32135679	chr2:32135679:G:A	rs78550108	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	32277496	32277497	chr2:32277497:C:T	rs396146	C	T	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	32342999	32343000	chr2:32343000:C:T	rs868022066	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	32464760	32464761	chr2:32464761:G:A	rs61757640	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	32647177	32647178	chr2:32647178:C:T	rs76628151	C	T	C	Hoxc9_MA0485.1	0	1	-	8.823852983637266	8.291037850346266	GGCCATAAATTCA
chr2	32773499	32773500	chr2:32773500:C:T	rs13012691	C	T	C	Hoxc9_MA0485.1	3	1	+	12.215053173163144	11.32680040014052	TGCCATAAATCAT
chr2	32773500	32773501	chr2:32773501:A:G	rs2116586	A	G	A	Hoxc9_MA0485.1	4	1	+	12.215053173163144	11.04728945917156	TGCCATAAATCAT
chr2	33011744	33011745	chr2:33011745:T:A	rs17012451	T	A	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	33014178	33014179	chr2:33014179:C:T	rs17012452	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	33071706	33071707	chr2:33071707:G:A	rs368858	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	33312235	33312236	chr2:33312236:A:T	rs1277992150	A	T	A	Hoxc9_MA0485.1	0	1	-	8.491882927287962	9.014432545662713	TGCCATCAATTAC
chr2	33472506	33472507	chr2:33472507:G:C	rs4280440	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	33496275	33496276	chr2:33496276:G:T	rs35807143	G	T	T	Hoxc9_MA0485.1	10	1	-	8.67742378350207	5.9934234496281205	CACTATAAATCTT
chr2	33622591	33622592	chr2:33622592:T:C	rs6717058	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	33690998	33690999	chr2:33690999:C:T	rs2197804	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	33892091	33892092	chr2:33892092:A:T	rs115913701	A	T	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	34432508	34432509	chr2:34432509:G:A	rs11900509	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	34751131	34751132	chr2:34751132:G:A	rs35330532	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	34784916	34784917	chr2:34784917:C:A	rs79662272	C	A	C	Hoxc9_MA0485.1	3	1	+	9.243453554862809	8.50870234729234	TGCCGTAAATTAT
chr2	35100507	35100508	chr2:35100508:T:A	rs10495835	T	A	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	35248729	35248730	chr2:35248730:G:A	rs28567058	G	A	g	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	35819219	35819220	chr2:35819220:C:T	rs3930199	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	35819284	35819285	chr2:35819285:A:G	rs13428332	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	35824428	35824429	chr2:35824429:G:A	rs9308985	G	A	A	Hoxc9_MA0485.1	2	1	-	6.732379320631707	5.355360843470483	GCCCGCAAATCAC
chr2	35835765	35835766	chr2:35835766:G:T	rs4670510	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	35939661	35939662	chr2:35939662:T:C	rs17017872	T	C	T	Hoxc9_MA0485.1	12	1	-	7.398992840949285	7.5246731977827555	TGCCATCAATCCA
chr2	36238200	36238201	chr2:36238201:A:G	rs76921118	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	36240304	36240305	chr2:36240305:A:T	rs1978511	A	T	A	Hoxc9_MA0485.1	3	1	+	8.867051474941832	8.713549909489677	GGCATTAAATCAT
chr2	36437754	36437755	chr2:36437755:A:T	rs17018790	A	T	A	Hoxc9_MA0485.1	0	1	+	8.175470782251262	7.652921163876511	AGACATAAATCCA
chr2	36508282	36508283	chr2:36508283:C:T	rs3770834	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	36549411	36549412	chr2:36549412:G:T	rs3770813	G	T	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	36664660	36664661	chr2:36664661:G:C	rs10173973	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	37318059	37318060	chr2:37318060:T:G	rs12616151	T	G	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	37387509	37387510	chr2:37387510:C:G	rs72792867	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	37449865	37449866	chr2:37449866:G:C	rs79245651	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	37458816	37458817	chr2:37458817:G:T	rs62133324	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	37469468	37469469	chr2:37469469:C:G	rs2041842	C	G	C	Hoxc9_MA0485.1	6	1	+	9.368386966182445	8.507512495004008	GCCCATCAATCAA
chr2	37490483	37490484	chr2:37490484:A:G	rs2373108	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	37531074	37531075	chr2:37531075:G:C	rs116412800	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	37758343	37758344	chr2:37758344:G:A	rs4629139	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	37758383	37758384	chr2:37758384:A:G	rs535656507	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	37775713	37775714	chr2:37775714:T:G	rs12996442	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	38106580	38106581	chr2:38106581:G:A	rs232532	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	38106594	38106595	chr2:38106595:T:G	rs75083269	T	G	T	Hoxc9_MA0485.1	5	1	+	11.852639263970774	4.954096288251178	ACCCATAAATCAC
chr2	38109002	38109003	chr2:38109003:G:A	rs2516276	G	A	A	Hoxc9_MA0485.1	1	1	-	9.846867285382556	8.90306744613769	GCCAATAAATTAC
chr2	38157001	38157002	chr2:38157002:G:A	rs232579	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	38181817	38181818	chr2:38181818:G:A	rs13396572	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	38264706	38264707	chr2:38264707:C:T	rs4670845	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	38794977	38794978	chr2:38794978:G:T	rs34818399	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	39078786	39078787	chr2:39078787:C:T	rs212322	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	39104951	39104952	chr2:39104952:A:C	rs2168043	A	C	A	Hoxc9_MA0485.1	10	1	-	8.19185450874718	5.194619605308653	GGCCATTAATTAC
chr2	39127370	39127371	chr2:39127371:G:A	rs56149931	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	39660407	39660408	chr2:39660408:A:G	rs10172930	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	39696998	39696999	chr2:39696999:A:T	rs2716723	A	T	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	40029372	40029373	chr2:40029373:A:G	rs79394290	A	G	A	Hoxc9_MA0485.1	5	1	-	8.408103990600145	3.9227926279616576	CTCTATAAATCTC
chr2	40168841	40168842	chr2:40168842:C:T	rs7558770	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	40168880	40168881	chr2:40168881:C:T	rs7558787	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	40265647	40265648	chr2:40265648:A:C	rs403630	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	40405811	40405812	chr2:40405812:C:A	rs116151121	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	40453008	40453009	chr2:40453009:T:G	rs2301343	T	G	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	40547005	40547006	chr2:40547006:A:G	rs114789597	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	40700700	40700701	chr2:40700701:T:C	rs1116005	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	40759719	40759720	chr2:40759720:C:T	rs4952649	C	T	c	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	40962400	40962401	chr2:40962401:C:T	rs57092482	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	41194255	41194256	chr2:41194256:T:G	rs57263344	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	41213820	41213821	chr2:41213821:T:G	rs12712741	T	G	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	41331678	41331679	chr2:41331679:A:G	rs11124805	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	41562245	41562246	chr2:41562246:T:A	rs565263733	T	A	T	Hoxc9_MA0485.1	8	1	-	7.1999928401721585	0.2980343300371978	GGTTGTCAATCAG
chr2	41562256	41562257	chr2:41562257:C:T	rs138516509	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	41873554	41873555	chr2:41873555:C:T	rs10193410	C	T	C	Hoxc9_MA0485.1	3	1	+	8.275315907468174	7.387063134445554	GACCGTAAATTAG
chr2	41880220	41880221	chr2:41880221:C:T	rs35907585	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	41880221	41880222	chr2:41880222:T:C	rs10211144	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	41966465	41966466	chr2:41966466:T:G	rs2165240	T	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	41984518	41984519	chr2:41984519:G:A	rs12617564	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	41993294	41993295	chr2:41993295:T:A	rs35531047	T	A	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	42084426	42084427	chr2:42084427:G:A	rs73930840	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	42084435	42084436	chr2:42084436:G:T	rs10454140	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	42084444	42084445	chr2:42084445:G:A	rs532104738	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	42217964	42217965	chr2:42217965:A:G	rs13018498	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	42268954	42268955	chr2:42268955:T:C	rs6748415	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	42296555	42296556	chr2:42296556:C:T	rs10490553	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	42580883	42580884	chr2:42580884:C:T	rs10167442	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	42842835	42842836	chr2:42842836:C:A	rs4953669	C	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	42850368	42850369	chr2:42850369:T:C	rs11896488	T	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	42857806	42857807	chr2:42857807:C:G	rs60242474	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	42895625	42895626	chr2:42895626:G:A	rs6544612	G	A	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	42979795	42979796	chr2:42979796:T:A	rs73923067	T	A	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	43027887	43027888	chr2:43027888:T:C	rs78287031	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	43042040	43042041	chr2:43042041:G:C	rs3884675	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	43257416	43257417	chr2:43257417:A:G	rs6749927	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	43419028	43419029	chr2:43419029:T:A	rs12477432	T	A	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	43521843	43521844	chr2:43521844:G:A	rs17030967	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	43605160	43605161	chr2:43605161:A:T	rs17031112	A	T	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	43613098	43613099	chr2:43613099:G:A	rs34156621	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	43710360	43710361	chr2:43710361:T:C	rs17414174	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	43763409	43763410	chr2:43763410:T:C	rs7602519	T	C	t	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	43889696	43889697	chr2:43889697:C:T	rs2955280	C	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	44055864	44055865	chr2:44055865:T:C	rs73924141	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	44087955	44087956	chr2:44087956:T:C	rs56220105	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	44816856	44816857	chr2:44816857:C:G	rs4953136	C	G	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	44832106	44832107	chr2:44832107:T:G	rs341577	T	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	44835109	44835110	chr2:44835110:C:T	rs62134195	C	T	C	Hoxc9_MA0485.1	0	1	+	7.960365542754886	8.192709200274255	CGCAATAAATATC
chr2	44912764	44912765	chr2:44912765:C:T	rs472140	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	45006973	45006974	chr2:45006974:A:C	rs2959230	A	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	45012034	45012035	chr2:45012035:A:G	rs1347660	A	G	G	Hoxc9_MA0485.1	8	1	+	8.633192851837478	1.7312343417025193	GCCCATGAATCAG
chr2	45069825	45069826	chr2:45069826:C:T	rs12618367	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	45088775	45088776	chr2:45088776:C:G	rs181918608	C	G	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	45088776	45088777	chr2:45088777:C:T	rs2944659	C	T	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	45110634	45110635	chr2:45110635:G:A	rs13430285	G	A	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	45131780	45131781	chr2:45131781:T:G	rs1850370	T	G	T	Hoxc9_MA0485.1	8	1	-	8.830925348954224	3.980523177009565	CACAATAAATCTT
chr2	45546371	45546372	chr2:45546372:A:G	rs17394527	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	45588851	45588852	chr2:45588852:A:G	rs6544836	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	45669297	45669298	chr2:45669298:C:A	rs582384	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	45691381	45691382	chr2:45691382:A:G	rs751829729	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	45892468	45892469	chr2:45892469:G:A	rs112327713	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	45962319	45962320	chr2:45962320:G:C	rs10197354	G	C	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	46032667	46032668	chr2:46032668:G:A	rs7600159	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	46032715	46032716	chr2:46032716:A:G	rs7573407	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	46069582	46069583	chr2:46069583:G:C	rs116428179	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	46145504	46145505	chr2:46145505:G:A	rs17034641	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	46145535	46145536	chr2:46145536:A:G	rs10495930	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	46303827	46303828	chr2:46303828:A:G	rs79993302	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	46352208	46352209	chr2:46352209:T:C	rs6743087	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	46363684	46363685	chr2:46363685:A:G	rs59435870	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	46391641	46391642	chr2:46391642:A:T	rs1530622	A	T	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	46416981	46416982	chr2:46416982:T:A	rs12986585	T	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	46416997	46416998	chr2:46416998:C:G	rs13010062	C	G	C	Hoxc9_MA0485.1	6	1	+	9.974065106101243	9.113190634922805	GGTCATCAATCAC
chr2	46494540	46494541	chr2:46494541:T:C	rs75205211	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	46548156	46548157	chr2:46548157:G:A	rs143098296	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	46556741	46556742	chr2:46556742:G:A	rs7591561	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	46556750	46556751	chr2:46556751:A:G	rs4142759	A	G	A	Hoxc9_MA0485.1	4	1	+	9.323801698070845	8.156037984079262	GCATATAAATCAT
chr2	47086837	47086838	chr2:47086838:G:C	rs180983739	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	47086908	47086909	chr2:47086909:T:C	rs2280647	T	C	T	Hoxc9_MA0485.1	12	1	+	9.829520288636443	10.083517242400996	AGCAATCAATCAT
chr2	47086912	47086913	chr2:47086913:T:C	rs1474394	T	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	47121515	47121516	chr2:47121516:A:G	rs35782848	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	47143987	47143988	chr2:47143988:G:T	rs137954667	G	T	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	47274178	47274179	chr2:47274179:G:A	rs142761695	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	47288123	47288124	chr2:47288124:G:T	rs13412502	G	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	47452838	47452839	chr2:47452839:G:A	rs10514805	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	47536755	47536756	chr2:47536756:T:C	rs748780	T	C	C	Hoxc9_MA0485.1	4	1	-	10.15394614883179	8.986182434840206	CTCCATAAATCAC
chr2	47662140	47662141	chr2:47662141:C:T	rs2969773	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	47682445	47682446	chr2:47682446:C:T	rs2037230	C	T	C	Hoxc9_MA0485.1	1	1	-	11.2457575870708	9.686314013160741	AGCTATAAATCTC
chr2	47737652	47737653	chr2:47737653:T:G	rs530742673	T	G	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	48235227	48235228	chr2:48235228:A:G	rs79629009	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	48249407	48249408	chr2:48249408:C:T	rs79624851	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	48347901	48347902	chr2:48347902:T:C	rs74356315	T	C	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	48527758	48527759	chr2:48527759:A:G	rs6725834	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	48601364	48601365	chr2:48601365:G:A	rs35883831	G	A	A	Hoxc9_MA0485.1	1	1	+	9.24807395194001	7.688630378029947	GGCAATAAATATC
chr2	48890931	48890932	chr2:48890932:G:T	rs17556827	G	T	G	Hoxc9_MA0485.1	2	1	-	7.953996085706433	6.0345931133026784	AACAGTAAATCTG
chr2	49129077	49129078	chr2:49129078:T:C	rs17038310	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	49679815	49679816	chr2:49679816:C:A	rs62134098	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	49720249	49720250	chr2:49720250:C:T	rs1401323	C	T	C	Hoxc9_MA0485.1	12	1	-	9.491437436139153	9.365757079305682	CCCTATAAATCAG
chr2	49772874	49772875	chr2:49772875:A:G	rs35062083	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	50083531	50083532	chr2:50083532:T:C	rs555872950	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	50103347	50103348	chr2:50103348:G:A	rs10169371	G	A	A	Hoxc9_MA0485.1	10	1	-	9.960610433925117	8.156774529616365	AGACATAAATCTT
chr2	50103371	50103372	chr2:50103372:T:C	rs10181708	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	50379503	50379504	chr2:50379504:T:C	rs7564130	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	50648942	50648943	chr2:50648943:C:T	rs2048979	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	50764888	50764889	chr2:50764889:A:C	rs9309195	A	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	50914395	50914396	chr2:50914396:G:A	rs62142976	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	50933421	50933422	chr2:50933422:G:T	rs13028294	G	T	G	Hoxc9_MA0485.1	4	1	+	8.331927342995398	5.831075814670382	TGTAGTAAATCTC
chr2	50951284	50951285	chr2:50951285:A:T	rs13029896	A	T	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	51013350	51013351	chr2:51013351:T:C	rs735194	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	51150942	51150943	chr2:51150943:C:T	rs112002894	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	51995256	51995257	chr2:51995257:C:T	rs2355181	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	52396681	52396682	chr2:52396682:T:C	rs1991152	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	52414468	52414469	chr2:52414469:T:A	rs12613150	T	A	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	52703676	52703677	chr2:52703677:C:A	rs10183343	C	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	52703718	52703719	chr2:52703719:C:T	rs6715803	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	52704993	52704994	chr2:52704994:T:C	rs6738153	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	52961128	52961129	chr2:52961129:A:G	rs2288639	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	53313555	53313556	chr2:53313556:A:C	rs11895925	A	C	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	53379060	53379061	chr2:53379061:A:G	rs75252230	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	53559698	53559699	chr2:53559699:A:C	rs1232230102	A	C	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	53863718	53863719	chr2:53863719:C:T	rs805376	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	54336226	54336227	chr2:54336227:A:G	rs9808395	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	54496133	54496134	chr2:54496134:T:C	rs10496032	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	54780723	54780724	chr2:54780724:T:C	rs6708721	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	54781344	54781345	chr2:54781345:A:C	rs12994099	A	C	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	54855765	54855766	chr2:54855766:T:G	rs7596552	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	55012065	55012066	chr2:55012066:G:T	rs6726158	G	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	55268810	55268811	chr2:55268811:A:G	rs904256749	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	56266627	56266628	chr2:56266628:A:G	rs13025817	A	G	A	Hoxc9_MA0485.1	5	1	-	9.410686673192268	4.92537531055378	TCACATAAATCAC
chr2	56313624	56313625	chr2:56313625:A:T	rs72803036	A	T	A	Hoxc9_MA0485.1	4	1	+	8.964323007099777	5.29570776478318	TCTAATAAATCAT
chr2	56522971	56522972	chr2:56522972:C:T	rs950084130	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	56532727	56532728	chr2:56532728:C:G	rs1304899	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	56565370	56565371	chr2:56565371:T:C	rs17048168	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	56579872	56579873	chr2:56579873:G:A	rs4365495	G	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	57550021	57550022	chr2:57550022:T:A	rs17048908	T	A	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	57602747	57602748	chr2:57602748:T:A	rs150968678	T	A	T	Hoxc9_MA0485.1	4	1	-	10.543903398369764	6.875288156053165	AACTATAAATCAC
chr2	57820127	57820128	chr2:57820128:C:A	rs2717052	C	A	A	Hoxc9_MA0485.1	3	1	+	9.679239337802468	8.944488130231997	ACACATAAATCAT
chr2	57856284	57856285	chr2:57856285:C:T	rs2953442	C	T	C	Hoxc9_MA0485.1	6	1	-	7.733518839460905	10.767724605970324	TGCCATGAATCTA
chr2	58157072	58157073	chr2:58157073:A:G	rs74430707	A	G	A	Hoxc9_MA0485.1	8	1	+	9.454948866392069	2.552990356257111	TGCAGTAAATCTT
chr2	58674374	58674375	chr2:58674375:C:T	rs6545696	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	59758930	59758931	chr2:59758931:C:T	rs6545750	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	59782406	59782407	chr2:59782407:C:T	rs1442882	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	59782409	59782410	chr2:59782410:C:T	rs7568615	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	60118326	60118327	chr2:60118327:A:C	rs979687	A	C	A	Hoxc9_MA0485.1	6	1	+	10.482676862359346	8.309345567028364	GGCAATAAATCCT
chr2	60350153	60350154	chr2:60350154:G:T	rs184838	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	60438494	60438495	chr2:60438495:T:G	rs71541916	T	G	T	Hoxc9_MA0485.1	7	1	-	9.477371894360326	2.5731428251547452	GCCAATCAATCAC
chr2	60479902	60479903	chr2:60479903:C:A	rs12992182	C	A	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	60885098	60885099	chr2:60885099:G:A	rs12477512	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	60885129	60885130	chr2:60885130:A:G	rs77262870	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	60887190	60887191	chr2:60887191:T:C	rs115022610	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	61046344	61046345	chr2:61046345:G:A	rs61527135	G	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	61962865	61962866	chr2:61962866:C:A	rs7579874	C	A	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	61969346	61969347	chr2:61969347:A:T	rs13011941	A	T	A	Hoxc9_MA0485.1	7	1	+	9.05511020629151	3.8592589973749343	TGGCATAAATCAG
chr2	62014305	62014306	chr2:62014306:G:T	rs567465084	G	T	G	Hoxc9_MA0485.1	1	1	+	8.66376927826799	6.581008957691452	GGATATAAATCCC
chr2	62045372	62045373	chr2:62045373:C:T	rs10188628	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	62186852	62186853	chr2:62186853:C:T	rs1449947	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	62374754	62374755	chr2:62374755:G:A	rs59611681	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	62382747	62382748	chr2:62382748:C:T	rs146326454	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	62382787	62382788	chr2:62382788:T:C	rs77120722	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	63044081	63044082	chr2:63044082:G:C	rs117356128	G	C	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	63382921	63382922	chr2:63382922:A:G	rs76458393	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	63504469	63504470	chr2:63504470:A:G	rs6735907	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	64085729	64085730	chr2:64085730:G:A	rs10165165	G	A	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	64414579	64414580	chr2:64414580:A:G	rs6713860	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	64586787	64586788	chr2:64586788:A:T	rs3821139	A	T	a	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	64627187	64627188	chr2:64627188:T:C	rs17029175	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	64730237	64730238	chr2:64730238:T:C	rs10185402	T	C	T	Hoxc9_MA0485.1	12	1	+	10.221623833045	10.475620786809552	ACTCATAAATCAT
chr2	64985043	64985044	chr2:64985044:A:G	rs6546118	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	65244671	65244672	chr2:65244672:G:T	rs60726151	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	65608911	65608912	chr2:65608912:C:A	rs77558083	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	65656355	65656356	chr2:65656356:G:C	rs148133184	G	C	G	Hoxc9_MA0485.1	1	1	-	10.276994099846872	11.415954581178546	ACCCATAAATCTG
chr2	65708022	65708023	chr2:65708023:C:T	rs17030670	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	65738129	65738130	chr2:65738130:T:C	rs4081680	T	C	C	Hoxc9_MA0485.1	8	1	-	9.294615534495325	2.392657024360367	GGAAATAAATCTG
chr2	65795142	65795143	chr2:65795143:G:A	rs67077796	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	65855516	65855517	chr2:65855517:A:G	rs13429724	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	66079869	66079870	chr2:66079870:T:A	rs4671711	T	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	66080324	66080325	chr2:66080325:A:C	rs7580714	A	C	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	66085088	66085089	chr2:66085089:G:A	rs1105244	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	66292744	66292745	chr2:66292745:A:G	rs11885650	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	66459463	66459464	chr2:66459464:T:C	rs6727704	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	66527820	66527821	chr2:66527821:A:G	rs72824804	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	66569475	66569476	chr2:66569476:G:A	rs2066927	G	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	66569514	66569515	chr2:66569515:G:A	rs546899013	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	66601852	66601853	chr2:66601853:C:T	rs55877133	C	T	C	Hoxc9_MA0485.1	2	1	-	7.3825834468768345	8.159064616194389	GCGCATAAATCCT
chr2	66851486	66851487	chr2:66851487:G:T	rs35195586	G	T	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	66960234	66960235	chr2:66960235:C:T	rs192664160	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	67037831	67037832	chr2:67037832:G:T	rs2098390	G	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	67079975	67079976	chr2:67079976:C:G	rs1921273	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	67079979	67079980	chr2:67079980:A:T	rs1921274	A	T	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	67130809	67130810	chr2:67130810:G:T	rs115044416	G	T	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	67240705	67240706	chr2:67240706:A:G	rs6546289	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	67290524	67290525	chr2:67290525:C:T	rs724076	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	67290540	67290541	chr2:67290541:C:G	rs1384744	C	G	C	Hoxc9_MA0485.1	10	1	+	7.463458351831065	2.662387544083787	GGCCACAAATCTG
chr2	67393424	67393425	chr2:67393425:C:T	rs760298509	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	67401266	67401267	chr2:67401267:T:A	rs148077105	T	A	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	67516451	67516452	chr2:67516452:T:C	rs114794265	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	67564105	67564106	chr2:67564106:A:G	rs143472922	A	G	A	Hoxc9_MA0485.1	11	1	+	8.708024148758403	4.295490749890035	GGCAATAAAACAT
chr2	67577246	67577247	chr2:67577247:C:T	rs140632103	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	67579859	67579860	chr2:67579860:C:T	rs10490721	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	67656935	67656936	chr2:67656936:G:C	rs73936561	G	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	67694617	67694618	chr2:67694618:C:T	rs17034142	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	67896337	67896338	chr2:67896338:C:T	rs13433075	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	67938504	67938505	chr2:67938505:C:T	rs10496154	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	68031154	68031155	chr2:68031155:T:C	rs72906828	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	68134773	68134774	chr2:68134774:A:C	rs200069460	A	C	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	68212035	68212036	chr2:68212036:C:A	rs4296409	C	A	A	Hoxc9_MA0485.1	12	1	+	8.295883879086603	7.452147743338254	TCCCATGAATCAC
chr2	68392956	68392957	chr2:68392957:C:T	rs10496165	C	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	68808227	68808228	chr2:68808228:G:A	chr2:68808228:G:A	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	69132679	69132680	chr2:69132680:T:A	rs35461269	T	A	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	69254223	69254224	chr2:69254224:T:C	rs77298108	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	69311085	69311086	chr2:69311086:A:G	rs10185891	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	69429221	69429222	chr2:69429222:T:C	rs59129812	T	C	T	Hoxc9_MA0485.1	4	1	-	10.199015679658674	9.03125196566709	AGCAATAAATTAT
chr2	69701792	69701793	chr2:69701793:C:T	rs6724142	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	69721132	69721133	chr2:69721133:C:G	rs6761399	C	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	70047747	70047748	chr2:70047748:G:A	rs73936794	G	A	g	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	70047785	70047786	chr2:70047786:T:C	rs7369819	T	C	t	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	70149441	70149442	chr2:70149442:C:A	rs4338986	C	A	c	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	70222643	70222644	chr2:70222644:A:G	rs2592182	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	70473054	70473055	chr2:70473055:G:A	rs116166437	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	70474415	70474416	chr2:70474416:G:A	rs536401827	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	70525741	70525742	chr2:70525742:G:C	rs6738666	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	70533358	70533359	chr2:70533359:G:T	rs13034560	G	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	70657484	70657485	chr2:70657485:G:T	rs1048746	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	70659358	70659359	chr2:70659359:A:G	rs72899625	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	70697844	70697845	chr2:70697845:T:C	rs3771462	T	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	70946560	70946561	chr2:70946561:A:G	rs2239486	A	G	G	Hoxc9_MA0485.1	7	1	+	8.401235490852383	1.4970064216468026	AACCATCAATCTC
chr2	70967429	70967430	chr2:70967430:C:T	rs67936056	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	71463729	71463730	chr2:71463730:G:A	rs11692280	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	71467980	71467981	chr2:71467981:G:T	rs6738477	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	71551901	71551902	chr2:71551902:G:A	rs7582130	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	71560300	71560301	chr2:71560301:C:T	rs11896175	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	71560321	71560322	chr2:71560322:C:T	rs116546110	C	T	C	Hoxc9_MA0485.1	1	1	+	9.689570255540467	8.745770416295603	GCGCATAAATCAC
chr2	71743072	71743073	chr2:71743073:C:T	rs919387148	C	T	C	Hoxc9_MA0485.1	12	1	+	8.930580934267274	8.676583980502722	AGTCATAAATAAC
chr2	71749755	71749756	chr2:71749756:G:T	chr2:71749756:G:T	G	T	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	71749963	71749964	chr2:71749964:G:C	rs1816221	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	71803340	71803341	chr2:71803341:A:G	rs6726307	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	71995322	71995323	chr2:71995323:T:C	rs972336142	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	72604198	72604199	chr2:72604199:C:T	rs112086820	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	72871316	72871317	chr2:72871317:G:A	rs13004642	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	72928384	72928385	chr2:72928385:G:A	rs113380917	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	73007827	73007828	chr2:73007828:T:C	rs56996879	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	73063343	73063344	chr2:73063344:G:C	rs13404068	G	C	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	73228618	73228619	chr2:73228619:C:T	rs2288631	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	73759472	73759473	chr2:73759473:C:A	rs57665766	C	A	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	73851586	73851587	chr2:73851587:G:T	rs35283510	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	73925051	73925052	chr2:73925052:G:C	rs831524	G	C	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	74192445	74192446	chr2:74192446:G:T	rs1095967	G	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	74741112	74741113	chr2:74741113:C:A	rs205621	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	74835412	74835413	chr2:74835413:C:G	rs993843720	C	G	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	74835458	74835459	chr2:74835459:C:T	rs192344626	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	75100554	75100555	chr2:75100555:G:A	rs17010738	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	75475691	75475692	chr2:75475692:C:T	rs115058769	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	75504175	75504176	chr2:75504176:G:A	rs56252362	G	A	g	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	75539475	75539476	chr2:75539476:G:A	rs867172	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	75598692	75598693	chr2:75598693:G:A	rs917235	G	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	75712610	75712611	chr2:75712611:C:T	rs7566936	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	75925809	75925810	chr2:75925810:A:G	rs72922190	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	76017821	76017822	chr2:76017822:A:G	rs427171	A	G	G	Hoxc9_MA0485.1	4	1	+	10.078467588598143	8.91070387460656	GCCCATAAATCCT
chr2	76080218	76080219	chr2:76080219:T:C	rs406952	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	76288894	76288895	chr2:76288895:C:T	rs1526620	C	T	T	Hoxc9_MA0485.1	12	1	+	9.050298585483278	8.796301631718725	TGCAATAAATAAC
chr2	76307540	76307541	chr2:76307541:A:G	rs112100936	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	76340080	76340081	chr2:76340081:G:A	rs2049548	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	76413719	76413720	chr2:76413720:C:G	rs13016651	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	76424244	76424245	chr2:76424245:T:C	rs13032190	T	C	C	Hoxc9_MA0485.1	5	1	+	9.810745363832472	5.325434001193986	AGTCATAAATTAC
chr2	76500538	76500539	chr2:76500539:T:C	rs72810811	T	C	T	Hoxc9_MA0485.1	8	1	-	9.066994014138869	2.165035504003911	TGCCATAAATAAG
chr2	76998869	76998870	chr2:76998870:C:T	rs59946045	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	77007640	77007641	chr2:77007641:C:T	rs17013592	C	T	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	77327411	77327412	chr2:77327412:T:A	rs436974	T	A	A	Hoxc9_MA0485.1	6	1	-	8.150850742932342	4.622126277394822	GGCTACAAATCAC
chr2	77328779	77328780	chr2:77328780:C:T	rs13025652	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	77612415	77612416	chr2:77612416:C:T	rs58294210	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	78363416	78363417	chr2:78363417:A:G	rs7606174	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	78780428	78780429	chr2:78780429:A:T	rs78912331	A	T	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	78920801	78920802	chr2:78920802:G:A	rs72814617	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	78948138	78948139	chr2:78948139:T:A	rs1597152	T	A	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	79020232	79020233	chr2:79020233:G:A	rs10201092	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	79178435	79178436	chr2:79178436:T:C	rs986389	T	C	T	Hoxc9_MA0485.1	2	1	+	10.038936104017322	11.415954581178546	AGTCATAAATCTG
chr2	79178461	79178462	chr2:79178462:G:A	rs12467611	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	79178485	79178486	chr2:79178486:G:A	rs75868666	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	79191281	79191282	chr2:79191282:C:G	rs17754855	C	G	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	79223938	79223939	chr2:79223939:C:T	rs1434197	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	79903837	79903838	chr2:79903838:T:C	rs10865447	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	79950617	79950618	chr2:79950618:C:T	rs12472674	C	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	80193570	80193571	chr2:80193571:T:C	rs7570531	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	80248322	80248323	chr2:80248323:C:G	rs77980160	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	80248358	80248359	chr2:80248359:G:C	rs417695	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	80375047	80375048	chr2:80375048:C:T	rs72813665	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	80464292	80464293	chr2:80464293:G:A	rs10496243	G	A	A	Hoxc9_MA0485.1	3	1	-	8.627042691905887	7.738789918883264	ACCCGTAAATTAT
chr2	80581901	80581902	chr2:80581902:C:G	rs17019401	C	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	80677261	80677262	chr2:80677262:T:C	rs1009518248	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	81230700	81230701	chr2:81230701:G:A	rs62154418	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	81262496	81262497	chr2:81262497:C:A	rs11126801	C	A	A	Hoxc9_MA0485.1	10	1	+	9.619389786413345	6.935389452539396	AGAAATAAATCAG
chr2	81364034	81364035	chr2:81364035:C:A	rs6547366	C	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	81364038	81364039	chr2:81364039:A:C	rs6547367	A	C	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	81423323	81423324	chr2:81423324:T:C	rs1369706	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	81583545	81583546	chr2:81583546:C:T	rs74641311	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	81583568	81583569	chr2:81583569:T:A	rs79628876	T	A	T	Hoxc9_MA0485.1	8	1	-	7.985319231886769	1.0833607217518102	AGGAATAAATCTG
chr2	81703682	81703683	chr2:81703683:C:T	rs4555368	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	83055718	83055719	chr2:83055719:A:C	rs539633951	A	C	A	Hoxc9_MA0485.1	4	1	+	10.337445565328224	5.1995188840785636	AGAAATAAATCAC
chr2	83177540	83177541	chr2:83177541:G:C	rs62148981	G	C	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	83209994	83209995	chr2:83209995:A:C	rs6740420	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	83232984	83232985	chr2:83232985:G:A	rs6547467	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	83246667	83246668	chr2:83246668:C:T	rs116802418	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	83266174	83266175	chr2:83266175:T:C	rs75249466	T	C	T	Hoxc9_MA0485.1	8	1	-	8.055129341819361	1.1531708316844014	AGACATCAATCAA
chr2	83368922	83368923	chr2:83368923:G:A	rs116837964	G	A	a	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	83650341	83650342	chr2:83650342:A:G	rs12994501	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	83821461	83821462	chr2:83821462:A:G	rs10169744	A	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	83826981	83826982	chr2:83826982:C:G	rs13415350	C	G	G	Hoxc9_MA0485.1	2	1	+	8.788883591126657	6.092999449405349	GGCCATGAATCTA
chr2	83866482	83866483	chr2:83866483:G:A	rs76043375	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	83912397	83912398	chr2:83912398:G:C	rs12468633	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	84129195	84129196	chr2:84129196:C:T	rs17388631	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	84329968	84329969	chr2:84329969:C:G	chr2:84329969:C:G	C	G	C	Hoxc9_MA0485.1	3	1	+	8.89997562268565	3.3835791506999597	ACTCATAAATCTG
chr2	84626926	84626927	chr2:84626927:A:T	rs11900084	A	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	84716835	84716836	chr2:84716836:A:C	rs116551204	A	C	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	84741729	84741730	chr2:84741730:C:T	rs77275579	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	85215616	85215617	chr2:85215617:G:A	rs55868746	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	85255879	85255880	chr2:85255880:G:A	rs2043229	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	85365862	85365863	chr2:85365863:G:A	rs116141693	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	85411199	85411200	chr2:85411200:A:G	rs11682055	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	85511754	85511755	chr2:85511755:G:T	rs2044476	G	T	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	85545937	85545938	chr2:85545938:A:G	rs12473819	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	85656061	85656062	chr2:85656062:C:T	rs114569138	C	T	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	85694353	85694354	chr2:85694354:G:A	rs142960627	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	85765579	85765580	chr2:85765580:C:T	rs115153832	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	85869686	85869687	chr2:85869687:C:A	rs4832015	C	A	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	85908030	85908031	chr2:85908031:G:A	rs2679722	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	85908077	85908078	chr2:85908078:G:A	rs4331504	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	85938641	85938642	chr2:85938642:A:G	rs10167259	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	86057162	86057163	chr2:86057163:G:A	rs311582	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	86074979	86074980	chr2:86074980:A:G	rs3815840	A	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	86078690	86078691	chr2:86078691:T:C	rs929916	T	C	C	Hoxc9_MA0485.1	4	1	-	9.46386327568015	8.296099561688566	AGCCATAAATAAA
chr2	86191596	86191597	chr2:86191597:G:A	rs145928316	G	A	g	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	86233437	86233438	chr2:86233438:A:T	rs1007502	A	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	86283160	86283161	chr2:86283161:A:G	rs6738585	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	86283164	86283165	chr2:86283165:T:C	rs6725234	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	86302624	86302625	chr2:86302625:A:G	rs34048420	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	86306783	86306784	chr2:86306784:C:A	rs114384598	C	A	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	86717556	86717557	chr2:86717557:C:A	rs150217132	C	A	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	87347604	87347605	chr2:87347605:C:A	rs72938930	C	A	.	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	87503172	87503173	chr2:87503173:A:G	rs114153163	A	G	A	Hoxc9_MA0485.1	11	1	-	10.012671313410204	8.817270843720145	GGAAATAAATCTC
chr2	87685209	87685210	chr2:87685210:G:C	rs1710495	G	C	.	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	88069078	88069079	chr2:88069079:A:G	rs988731	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	88501892	88501893	chr2:88501893:G:C	rs10179293	G	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	88716329	88716330	chr2:88716330:C:T	rs6746372	C	T	N	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	88802080	88802081	chr2:88802081:T:C	rs2365118	T	C	N	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	88871839	88871840	chr2:88871840:T:G	rs232207	T	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	89761319	89761320	chr2:89761320:A:T	rs1321476539	A	T	.	Hoxc9_MA0485.1	8	1	+	7.262559074585929	0.3606005644509692	CTCCATCAATCAG
chr2	89762434	89762435	chr2:89762435:G:T	rs1264219803	G	T	.	Hoxc9_MA0485.1	2	1	-	6.636189064219816	4.716786091816062	GGCCATAAAGCAC
chr2	89762452	89762453	chr2:89762453:G:T	rs1468216971	G	T	.	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	89765040	89765041	chr2:89765041:G:A	rs1383755839	G	A	.	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	89765069	89765070	chr2:89765070:C:T	rs1402370523	C	T	.	Hoxc9_MA0485.1	12	1	+	8.295111565773347	8.041114612008794	AGCCGTTAATCAC
chr2	95022970	95022971	chr2:95022971:C:T	rs142328096	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	95289931	95289932	chr2:95289932:G:T	rs2278067	G	T	G	Hoxc9_MA0485.1	1	1	-	8.810901247736671	8.390418155158283	ACCAATAAATCCT
chr2	95334176	95334177	chr2:95334177:C:A	rs144841985	C	A	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	96095516	96095517	chr2:96095517:G:A	rs117107652	G	A	G	Hoxc9_MA0485.1	1	1	+	8.785106562190412	7.2256629882803525	GGCCACAAATCAT
chr2	96111419	96111420	chr2:96111420:T:G	rs2312955	T	G	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	96510896	96510897	chr2:96510897:C:T	rs2579503	C	T	C	Hoxc9_MA0485.1	12	1	-	8.709518945119092	8.583838588285621	TCCAGTAAATCAG
chr2	96871115	96871116	chr2:96871116:C:T	rs74562642	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	97553080	97553081	chr2:97553081:C:G	rs9677087	C	G	c	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	97553119	97553120	chr2:97553120:G:T	rs9679293	G	T	t	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	97807610	97807611	chr2:97807611:C:A	rs6543111	C	A	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	98212773	98212774	chr2:98212774:A:G	rs2122756	A	G	G	Hoxc9_MA0485.1	2	1	-	9.3907061288091	10.767724605970324	TGTCATAAATCTA
chr2	98334508	98334509	chr2:98334509:C:T	rs62155356	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	98846247	98846248	chr2:98846248:C:T	rs12712036	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	98898024	98898025	chr2:98898025:A:G	rs75749577	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	99600986	99600987	chr2:99600987:C:T	rs3792133	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	99609285	99609286	chr2:99609286:G:A	rs34112064	G	A	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	99609290	99609291	chr2:99609291:C:T	rs11895560	C	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	99662878	99662879	chr2:99662879:G:C	rs17022861	G	C	G	Hoxc9_MA0485.1	1	1	+	6.986113661055884	5.847153179724211	GGCCACAAATCCC
chr2	99777557	99777558	chr2:99777558:T:C	rs13419977	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	99882121	99882122	chr2:99882122:C:A	rs541419504	C	A	C	Hoxc9_MA0485.1	1	1	+	11.598642310206221	11.178159217627835	ACCCATAAATCAT
chr2	99960344	99960345	chr2:99960345:T:C	rs11887597	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	99960354	99960355	chr2:99960355:C:T	rs62149271	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	99960379	99960380	chr2:99960380:C:T	rs188821292	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	99999290	99999291	chr2:99999291:T:C	rs62149306	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	100278339	100278340	chr2:100278340:C:G	rs4851283	C	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	100470978	100470979	chr2:100470979:A:C	rs13428101	A	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	100812280	100812281	chr2:100812281:C:A	rs59341306	C	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	100812311	100812312	chr2:100812312:G:A	rs11893548	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	100891981	100891982	chr2:100891982:A:G	rs72627426	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	100892000	100892001	chr2:100892001:C:G	rs6721366	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	100909691	100909692	chr2:100909692:C:T	rs72627430	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	100931790	100931791	chr2:100931791:A:G	rs112682528	A	G	A	Hoxc9_MA0485.1	11	1	+	7.955956927733914	3.543423528865545	GGCCATAACTCAG
chr2	101400498	101400499	chr2:101400499:T:C	rs4851432	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	101645133	101645134	chr2:101645134:T:G	rs4851475	T	G	T	Hoxc9_MA0485.1	0	1	+	8.990890041241743	10.046254792907495	TGCAGTAAATCTG
chr2	101645164	101645165	chr2:101645165:C:T	rs62155063	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	101781433	101781434	chr2:101781434:G:A	rs149160598	G	A	G	Hoxc9_MA0485.1	2	1	-	7.793877430483475	6.416858953322251	GCCAATAAATTCC
chr2	102006542	102006543	chr2:102006543:T:C	rs13408303	T	C	T	Hoxc9_MA0485.1	3	1	-	7.669809214718215	2.888163950302994	TGCAGTAAATCCA
chr2	102019567	102019568	chr2:102019568:A:T	rs2072480	A	T	a	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	102046358	102046359	chr2:102046359:A:G	rs62154653	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	102112268	102112269	chr2:102112269:G:C	rs1861282	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	102144257	102144258	chr2:102144258:G:A	rs7580384	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	102352316	102352317	chr2:102352317:C:T	rs77598713	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	102482333	102482334	chr2:102482334:C:T	rs6737325	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	102550128	102550129	chr2:102550129:A:G	rs78131957	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	102848908	102848909	chr2:102848909:C:G	rs138112614	C	G	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	102972469	102972470	chr2:102972470:G:C	rs59017564	G	C	G	Hoxc9_MA0485.1	10	1	-	8.953049741882113	4.151978934134837	GTTCATAAATCTT
chr2	103964044	103964045	chr2:103964045:C:T	rs12613775	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	104405289	104405290	chr2:104405290:C:T	rs2139397	C	T	T	Hoxc9_MA0485.1	6	1	+	8.00554231600404	6.650149145797507	CGCCATCAATTAT
chr2	104416475	104416476	chr2:104416476:G:T	rs542873003	G	T	G	Hoxc9_MA0485.1	0	1	+	9.005973328829123	7.950608577163369	GCCCATAAATTTG
chr2	104538404	104538405	chr2:104538405:C:T	rs13405030	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	104845805	104845806	chr2:104845806:G:C	rs551384682	G	C	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	104845807	104845808	chr2:104845808:G:T	rs145719052	G	T	G	Hoxc9_MA0485.1	0	1	+	7.900143034623292	6.844778282957537	GCCCACAAATCAC
chr2	105184460	105184461	chr2:105184461:C:T	rs2576798	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	105184494	105184495	chr2:105184495:G:A	rs6736495	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	105400162	105400163	chr2:105400163:A:G	rs140017609	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	105520959	105520960	chr2:105520960:A:T	rs4851789	A	T	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	105553733	105553734	chr2:105553734:A:G	rs75582816	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	105553735	105553736	chr2:105553736:C:G	rs140822939	C	G	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	105698463	105698464	chr2:105698464:C:T	rs369999820	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	106065860	106065861	chr2:106065861:A:G	rs17032271	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	106065883	106065884	chr2:106065884:G:T	rs73949223	G	T	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	106201631	106201632	chr2:106201632:G:T	rs12468463	G	T	g	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	106271615	106271616	chr2:106271616:T:C	rs4676155	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	106629968	106629969	chr2:106629969:T:C	rs1512086	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	106719415	106719416	chr2:106719416:T:C	rs2199257	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	106841819	106841820	chr2:106841820:G:C	rs1868257	G	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	106876551	106876552	chr2:106876552:C:T	rs66511537	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	107002880	107002881	chr2:107002881:T:C	rs62152194	T	C	T	Hoxc9_MA0485.1	9	1	+	10.555055808652735	3.666829994279103	GGTAATAAATCTC
chr2	107927151	107927152	chr2:107927152:G:T	rs13022589	G	T	.	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	108128585	108128586	chr2:108128586:C:A	rs6708539	C	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	108450075	108450076	chr2:108450076:T:C	rs76428482	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	108583326	108583327	chr2:108583327:A:G	rs2718719	A	G	N	Hoxc9_MA0485.1	8	1	+	9.127951889589555	2.225993379454594	AGGCGTAAATCAC
chr2	108583327	108583328	chr2:108583328:T:C	rs2577624	T	C	N	Hoxc9_MA0485.1	9	1	+	9.127951889589555	2.239726075215921	AGGCGTAAATCAC
chr2	108616802	108616803	chr2:108616803:A:T	rs1048430086	A	T	A	Hoxc9_MA0485.1	9	1	-	9.256681037138172	5.429038468638148	GGCTATAAATTTG
chr2	108640822	108640823	chr2:108640823:A:G	rs528177179	A	G	a	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	108663526	108663527	chr2:108663527:A:T	rs826678	A	T	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	108742595	108742596	chr2:108742596:G:A	rs2059725	G	A	g	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	109069255	109069256	chr2:109069256:T:A	rs11695201	T	A	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	109089229	109089230	chr2:109089230:A:C	rs117879382	A	C	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	109191428	109191429	chr2:109191429:G:A	rs1430306	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	109322289	109322290	chr2:109322290:C:A	rs1053900369	C	A	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	109409859	109409860	chr2:109409860:A:G	rs4676086	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	109447204	109447205	chr2:109447205:C:T	rs34554071	C	T	C	Hoxc9_MA0485.1	0	1	+	8.46028723675802	8.69263089427739	CCACATAAATCAG
chr2	109497569	109497570	chr2:109497570:G:A	rs76367730	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	110840787	110840788	chr2:110840788:T:C	rs999643	T	C	C	Hoxc9_MA0485.1	11	1	-	8.887564081539203	4.475030682670835	GCAAATAAATCAA
chr2	110840788	110840789	chr2:110840789:G:A	rs999642	G	A	A	Hoxc9_MA0485.1	10	1	-	8.887564081539203	7.083728177230452	GCAAATAAATCAA
chr2	111068708	111068709	chr2:111068709:C:T	rs35812219	C	T	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	111068709	111068710	chr2:111068710:G:C	rs17041844	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	111068714	111068715	chr2:111068715:G:C	rs17483962	G	C	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	111133218	111133219	chr2:111133219:T:C	rs35633067	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	111208913	111208914	chr2:111208914:G:T	rs17041928	G	T	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	111227374	111227375	chr2:111227375:G:C	rs59825798	G	C	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	111250024	111250025	chr2:111250025:G:A	rs193031933	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	111419045	111419046	chr2:111419046:C:G	rs143496984	C	G	C	Hoxc9_MA0485.1	1	1	-	9.814895946953472	8.675935465621798	TGAAATAAATCAC
chr2	111708687	111708688	chr2:111708688:T:G	rs12373588	T	G	G	Hoxc9_MA0485.1	5	1	+	9.9530711684348	3.0545281927152024	TCTCATAAATCAC
chr2	111735408	111735409	chr2:111735409:T:C	rs11684402	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	112153132	112153133	chr2:112153133:G:A	rs72831617	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	112275468	112275469	chr2:112275469:C:T	chr2:112275469:C:T	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	112705518	112705519	chr2:112705519:T:A	rs4849107	T	A	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	112923863	112923864	chr2:112923864:C:T	rs4849133	C	T	T	Hoxc9_MA0485.1	1	1	-	6.625871902873855	5.066428328963794	GGCCAGAAATCAC
chr2	112992892	112992893	chr2:112992893:A:G	rs1446516	A	G	a	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr2	113005997	113005998	chr2:113005998:A:G	rs895497	A	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	113124446	113124447	chr2:113124447:C:G	rs1894405	C	G	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	113231151	113231152	chr2:113231152:T:C	rs66775912	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	113232664	113232665	chr2:113232665:T:C	rs2166421	T	C	T	Hoxc9_MA0485.1	8	1	-	7.675148131119783	0.7731896209848229	TGCAGTCAATCAG
chr2	113232683	113232684	chr2:113232684:G:A	rs7421852	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	113979148	113979149	chr2:113979149:C:T	rs72954522	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	114128452	114128453	chr2:114128453:A:G	rs4849306	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	114358903	114358904	chr2:114358904:C:T	rs56403060	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	114579672	114579673	chr2:114579673:G:A	rs10496466	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	115170022	115170023	chr2:115170023:G:C	rs77472469	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	115910485	115910486	chr2:115910486:G:A	rs11890985	G	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	116490833	116490834	chr2:116490834:C:T	rs75061572	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	116510398	116510399	chr2:116510399:A:G	rs10210778	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	116705317	116705318	chr2:116705318:A:G	rs11123395	A	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	117068591	117068592	chr2:117068592:G:A	rs62154358	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	117514768	117514769	chr2:117514769:T:C	rs11679441	T	C	T	Hoxc9_MA0485.1	4	1	-	11.429340622517346	10.261576908525763	GGTCATAAATCAG
chr2	117612901	117612902	chr2:117612902:G:A	rs11676498	G	A	G	Hoxc9_MA0485.1	1	1	+	9.996678408971151	8.437234835061089	GGCCATAAATAAA
chr2	117761242	117761243	chr2:117761243:A:G	rs7559497	A	G	A	Hoxc9_MA0485.1	4	1	+	10.105663337149032	8.937899623157447	GGCAATAAATAAC
chr2	117761264	117761265	chr2:117761265:T:C	rs169493	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	117770674	117770675	chr2:117770675:G:A	rs78460409	G	A	G	Hoxc9_MA0485.1	1	1	+	9.17768365709416	7.618240083184099	GGACATCAATCAT
chr2	117980837	117980838	chr2:117980838:T:C	rs559137014	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	118224701	118224702	chr2:118224702:G:T	rs77883434	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	118275941	118275942	chr2:118275942:G:A	rs6732183	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	118499716	118499717	chr2:118499717:A:G	rs4848514	A	G	A	Hoxc9_MA0485.1	7	1	+	7.431845658348599	0.5276165891430209	GCACATGAATCAC
chr2	118568993	118568994	chr2:118568994:T:C	chr2:118568994:T:C	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	118705001	118705002	chr2:118705002:T:C	rs332066	T	C	C	Hoxc9_MA0485.1	2	1	-	8.393135279197336	7.616654109879783	TGAAGTAAATCAT
chr2	118705004	118705005	chr2:118705005:T:C	rs78883337	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	118751593	118751594	chr2:118751594:G:T	rs7568084	G	T	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	118849893	118849894	chr2:118849894:C:A	rs893572	C	A	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	119059620	119059621	chr2:119059621:C:T	rs4848533	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	119120287	119120288	chr2:119120288:T:C	rs79252097	T	C	T	Hoxc9_MA0485.1	12	1	-	8.947903873604057	9.073584230437527	GACCATCAATCAA
chr2	119219099	119219100	chr2:119219100:A:T	rs966431586	A	T	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	119219119	119219120	chr2:119219120:T:C	rs75111805	T	C	T	Hoxc9_MA0485.1	2	1	+	8.994010567664294	10.371029044825516	AGTAGTAAATCAG
chr2	119318380	119318381	chr2:119318381:A:G	rs67218267	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	119491797	119491798	chr2:119491798:G:A	rs72834818	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	119491805	119491806	chr2:119491806:C:T	rs376995324	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	119493931	119493932	chr2:119493932:C:A	rs2579658	C	A	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	119528118	119528119	chr2:119528119:G:T	rs2587686	G	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	119579517	119579518	chr2:119579518:A:G	rs17049444	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	119608718	119608719	chr2:119608719:T:C	rs1521915	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	119651774	119651775	chr2:119651775:C:T	rs1521911	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	119761719	119761720	chr2:119761720:A:G	rs80255266	A	G	A	Hoxc9_MA0485.1	2	1	-	9.064818395412177	10.4418368725734	TCTTATAAATCAC
chr2	119836968	119836969	chr2:119836969:C:T	rs113830500	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	120257768	120257769	chr2:120257769:C:T	rs75330676	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	120259174	120259175	chr2:120259175:T:C	rs4594445	T	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	120269340	120269341	chr2:120269341:A:C	rs187250107	A	C	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	120407492	120407493	chr2:120407493:C:T	rs67933862	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	120436348	120436349	chr2:120436349:C:T	rs12613245	C	T	T	Hoxc9_MA0485.1	12	1	-	9.723781093658522	9.598100736825051	TCCTATAAATCAG
chr2	120531530	120531531	chr2:120531531:C:T	rs2311302	C	T	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	120710624	120710625	chr2:120710625:A:G	rs7600172	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	120758665	120758666	chr2:120758666:C:T	rs114630906	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	120758695	120758696	chr2:120758696:G:A	rs80279798	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	120869599	120869600	chr2:120869600:A:G	rs4848126	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	121376732	121376733	chr2:121376733:C:G	rs74782141	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	121454677	121454678	chr2:121454678:T:C	rs112321688	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	121867853	121867854	chr2:121867854:C:T	rs4465772	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	121918430	121918431	chr2:121918431:G:T	rs114459462	G	T	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	122503734	122503735	chr2:122503735:A:G	rs941219	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	122610243	122610244	chr2:122610244:C:T	rs13425635	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	122818416	122818417	chr2:122818417:C:G	rs296042	C	G	c	Hoxc9_MA0485.1	2	1	+	7.149653207654866	4.453769065933556	AGCCTTCAATCAC
chr2	122818442	122818443	chr2:122818443:T:C	rs296043	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	123070323	123070324	chr2:123070324:T:C	rs17009319	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	123085672	123085673	chr2:123085673:T:A	rs6761730	T	A	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	123356170	123356171	chr2:123356171:G:T	rs62167128	G	T	G	Hoxc9_MA0485.1	12	1	+	8.445901397887544	8.90996022303787	AGCCATAAAACAG
chr2	123540410	123540411	chr2:123540411:C:T	rs62162721	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	123723770	123723771	chr2:123723771:G:A	rs7593488	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	124310717	124310718	chr2:124310718:G:C	rs117896787	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	124354588	124354589	chr2:124354589:A:G	rs62171018	A	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	124704718	124704719	chr2:124704719:A:G	rs7581991	A	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	125649376	125649377	chr2:125649377:T:A	rs6750613	T	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	125683119	125683120	chr2:125683120:A:G	rs2114601	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	125962033	125962034	chr2:125962034:C:T	rs12711723	C	T	c	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	126252182	126252183	chr2:126252183:T:G	rs729446	T	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	126695809	126695810	chr2:126695810:C:T	rs1530148	C	T	C	Hoxc9_MA0485.1	0	1	+	8.456508282588695	8.688851940108062	CATCATAAATCAA
chr2	126763874	126763875	chr2:126763875:C:T	rs115254009	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	126765540	126765541	chr2:126765541:A:G	rs12328974	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	126791534	126791535	chr2:126791535:T:G	rs11886274	T	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	126828326	126828327	chr2:126828327:A:G	rs62158478	A	G	A	Hoxc9_MA0485.1	11	1	+	9.22089994510734	4.808366546238971	GTTCATAAATCAA
chr2	126839754	126839755	chr2:126839755:C:T	rs62158494	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	127111156	127111157	chr2:127111157:C:T	rs13410629	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	127362269	127362270	chr2:127362270:T:C	rs55998444	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	127453597	127453598	chr2:127453598:A:G	rs13383674	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	127888194	127888195	chr2:127888195:A:C	rs62159277	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	128321389	128321390	chr2:128321390:C:T	chr2:128321390:C:T	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	128394186	128394187	chr2:128394187:A:G	rs182695218	A	G	A	Hoxc9_MA0485.1	4	1	+	10.588420035644038	9.420656321652455	AACCATAAATCAA
chr2	128485140	128485141	chr2:128485141:A:G	rs841099	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	128588963	128588964	chr2:128588964:G:C	chr2:128588964:G:C	G	C	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	128681463	128681464	chr2:128681464:C:T	rs55744746	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	128746928	128746929	chr2:128746929:T:A	rs7564909	T	A	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	128785254	128785255	chr2:128785255:C:T	rs17048785	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	129006370	129006371	chr2:129006371:A:G	rs11689142	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	129056553	129056554	chr2:129056554:C:T	rs12996822	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	129098503	129098504	chr2:129098504:A:C	rs60543266	A	C	C	Hoxc9_MA0485.1	2	1	+	8.340895698787527	10.260298671191283	ACAAATAAATCTC
chr2	129160248	129160249	chr2:129160249:A:G	rs72846167	A	G	G	Hoxc9_MA0485.1	8	1	+	7.797610056332134	0.8956515461971748	GGGCATCAATCTC
chr2	129575617	129575618	chr2:129575618:T:G	chr2:129575618:T:G	T	G	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	130145183	130145184	chr2:130145184:G:C	rs35105986	G	C	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	130825810	130825811	chr2:130825811:G:A	rs35031046	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	130892449	130892450	chr2:130892450:C:T	rs13407188	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	131527782	131527783	chr2:131527783:C:A	rs1812767	C	A	.	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	131527782	131527783	chr2:131527783:C:G	chr2:131527783:C:G	C	G	.	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	131527792	131527793	chr2:131527793:C:T	rs151011970	C	T	.	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	131837338	131837339	chr2:131837339:C:A	rs13015043	C	A	c	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	131924582	131924583	chr2:131924583:A:G	rs7561718	A	G	a	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	132254879	132254880	chr2:132254880:C:A	rs530911759	C	A	.	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	132448337	132448338	chr2:132448338:G:A	rs115785372	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	132518283	132518284	chr2:132518284:T:G	rs7604725	T	G	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	132518293	132518294	chr2:132518294:T:C	rs4606980	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	132611342	132611343	chr2:132611343:A:G	rs10496689	A	G	A	Hoxc9_MA0485.1	5	1	-	8.884104074082357	4.398792711443872	GGCCATTAATCTT
chr2	132678556	132678557	chr2:132678557:T:C	rs7560280	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	132691287	132691288	chr2:132691288:G:A	rs976904	G	A	G	Hoxc9_MA0485.1	4	1	+	8.6580839054633	9.825847619454885	AACTGTAAATCAG
chr2	132693023	132693024	chr2:132693024:T:C	rs744822	T	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	132974948	132974949	chr2:132974949:C:T	rs756601765	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	132977648	132977649	chr2:132977649:C:G	rs7589684	C	G	G	Hoxc9_MA0485.1	3	1	+	9.26836086858994	3.751964396604249	AGACATAAATTAC
chr2	133601289	133601290	chr2:133601290:C:T	rs79321042	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	133675455	133675456	chr2:133675456:G:A	rs573783785	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	133686448	133686449	chr2:133686449:G:A	rs1869051	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	133750676	133750677	chr2:133750677:C:T	rs16828728	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	133774745	133774746	chr2:133774746:C:T	rs1446743	C	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	133821584	133821585	chr2:133821585:C:A	rs62166134	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	133834732	133834733	chr2:133834733:A:G	rs12623096	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	133879881	133879882	chr2:133879882:G:A	rs35560012	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	133887242	133887243	chr2:133887243:C:A	rs80292959	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	134119733	134119734	chr2:134119734:T:G	rs531184127	T	G	T	Hoxc9_MA0485.1	8	1	-	10.586417590954948	5.7360154190102906	GGCCATAAATAAT
chr2	134119743	134119744	chr2:134119744:C:A	rs115259802	C	A	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	134233261	134233262	chr2:134233262:A:C	rs112503076	A	C	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	134235756	134235757	chr2:134235757:G:A	rs6752163	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	134324872	134324873	chr2:134324873:G:A	rs11674550	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	134446642	134446643	chr2:134446643:C:A	rs78405979	C	A	C	Hoxc9_MA0485.1	6	1	-	8.859193681158253	8.364674982130156	GGTCATGAATCAT
chr2	134502499	134502500	chr2:134502500:C:T	rs503562	C	T	T	Hoxc9_MA0485.1	1	1	-	9.913255747183852	8.353812173273791	AGTCATAAATCTA
chr2	134595612	134595613	chr2:134595613:C:T	rs13410301	C	T	C	Hoxc9_MA0485.1	1	1	-	9.71743826545993	8.157994691549868	CGTTATAAATCAT
chr2	134758886	134758887	chr2:134758887:C:A	rs113499195	C	A	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	134758933	134758934	chr2:134758934:A:G	rs78877892	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	134819435	134819436	chr2:134819436:C:T	rs528057422	C	T	C	Hoxc9_MA0485.1	1	1	-	7.664051665322485	6.104608091412422	GGTTGTCAATCAT
chr2	135953045	135953046	chr2:135953046:C:T	rs75346069	C	T	C	Hoxc9_MA0485.1	3	1	+	8.082736276181157	7.194483503158533	TGCCATTAATCTC
chr2	136126214	136126215	chr2:136126215:G:C	rs77895594	G	C	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	136126252	136126253	chr2:136126253:C:T	rs4954391	C	T	c	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	136311320	136311321	chr2:136311321:T:C	rs78481513	T	C	T	Hoxc9_MA0485.1	4	1	-	8.989277900173533	7.8215141861819495	GCCAATAAATTTC
chr2	136324214	136324215	chr2:136324215:A:G	rs117974130	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	136350379	136350380	chr2:136350380:A:G	rs62161295	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	136384929	136384930	chr2:136384930:A:G	rs867563	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	136440982	136440983	chr2:136440983:C:G	rs16834248	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	137168555	137168556	chr2:137168556:G:T	rs12997500	G	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	137231832	137231833	chr2:137231833:G:A	rs34585777	G	A	G	Hoxc9_MA0485.1	3	1	-	8.873426991189515	7.985174218166892	CACCATAAATTAC
chr2	137539043	137539044	chr2:137539044:T:C	rs11692871	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	138035717	138035718	chr2:138035718:G:A	rs73959303	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	138222096	138222097	chr2:138222097:A:G	rs4954854	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	138254266	138254267	chr2:138254267:A:T	rs7565340	A	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	138622901	138622902	chr2:138622902:C:T	rs13420160	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	138720510	138720511	chr2:138720511:C:T	rs34561430	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	139946864	139946865	chr2:139946865:A:T	rs73963213	A	T	A	Hoxc9_MA0485.1	5	1	-	8.409772324503438	1.5112293487838444	GGATATAAATCCT
chr2	140508462	140508463	chr2:140508463:T:A	rs77330696	T	A	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	140593430	140593431	chr2:140593431:G:A	rs540949	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	140880358	140880359	chr2:140880359:G:A	rs17518189	G	A	G	Hoxc9_MA0485.1	2	1	-	6.877775683274888	5.500757206113663	GACCATGAATCCC
chr2	141899027	141899028	chr2:141899028:T:C	rs1435598	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	142175902	142175903	chr2:142175903:C:G	rs72852667	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	142185764	142185765	chr2:142185765:T:C	rs75605792	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	142185810	142185811	chr2:142185811:A:C	rs10198708	A	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	142531614	142531615	chr2:142531615:G:C	rs77834616	G	C	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	142897345	142897346	chr2:142897346:A:T	rs4662187	A	T	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	143053804	143053805	chr2:143053805:C:T	rs2083370	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	143420830	143420831	chr2:143420831:T:C	rs12612084	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	143433475	143433476	chr2:143433476:G:A	rs114415950	G	A	G	Hoxc9_MA0485.1	4	1	+	8.364057233573101	9.531820947564686	ATTCGTAAATCAC
chr2	143473739	143473740	chr2:143473740:G:A	rs4273169	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	143571987	143571988	chr2:143571988:C:T	rs7606634	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	143876027	143876028	chr2:143876028:G:A	rs752973	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	143901769	143901770	chr2:143901770:C:G	rs527589357	C	G	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	143916631	143916632	chr2:143916632:T:C	rs787144	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	144464889	144464890	chr2:144464890:A:T	chr2:144464890:A:T	A	T	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	144539538	144539539	chr2:144539539:T:C	rs549079654	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	144539556	144539557	chr2:144539557:G:A	rs79084776	G	A	G	Hoxc9_MA0485.1	3	1	-	8.977170096169212	8.088917323146589	GGCCGTAAATTTG
chr2	144694588	144694589	chr2:144694589:A:G	rs1427510	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	144713721	144713722	chr2:144713722:A:T	rs67963154	A	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	144806477	144806478	chr2:144806478:A:G	rs1483491	A	G	A	Hoxc9_MA0485.1	9	1	+	8.3063677915934	5.245784545719793	AGCCATAAAACTC
chr2	144942919	144942920	chr2:144942920:C:T	rs559746216	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	145023705	145023706	chr2:145023706:G:C	rs2579024	G	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	145117721	145117722	chr2:145117722:C:T	rs1997287	C	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	145320222	145320223	chr2:145320223:T:C	rs6722986	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	145798804	145798805	chr2:145798805:C:T	rs2178633	C	T	C	Hoxc9_MA0485.1	10	1	+	10.103283488431451	8.2994475841227	TGTAATAAATCAT
chr2	145928088	145928089	chr2:145928089:A:G	rs1567988	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	146129207	146129208	chr2:146129208:G:A	rs28595092	G	A	G	Hoxc9_MA0485.1	1	1	+	8.880777032330062	7.321333458420003	AGCCATAAATTCT
chr2	146312862	146312863	chr2:146312863:T:G	rs139665567	T	G	T	Hoxc9_MA0485.1	0	1	+	7.801365180058505	8.85672993172426	TCCCATTAATCAC
chr2	146806687	146806688	chr2:146806688:G:A	rs28742032	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	146918524	146918525	chr2:146918525:A:T	rs10496999	A	T	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	147082261	147082262	chr2:147082262:G:A	rs374722	G	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	147352934	147352935	chr2:147352935:C:T	rs58108379	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	147451577	147451578	chr2:147451578:C:T	rs1438871	C	T	T	Hoxc9_MA0485.1	2	1	+	9.16376439478599	7.786745917624764	TACTATAAATCTC
chr2	147645053	147645054	chr2:147645054:A:G	rs76923047	A	G	A	Hoxc9_MA0485.1	12	1	+	9.528894576155547	9.654574932989018	GACAATAAATCTA
chr2	147862176	147862177	chr2:147862177:T:C	rs1895694	T	C	t	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	148680641	148680642	chr2:148680642:G:A	rs6759083	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	149038209	149038210	chr2:149038210:T:C	rs16822509	T	C	T	Hoxc9_MA0485.1	4	1	-	8.701290859490996	7.533527145499412	AGCTATAAATAAG
chr2	149124998	149124999	chr2:149124999:T:C	rs10803829	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	149141443	149141444	chr2:149141444:G:A	rs184866713	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	149278479	149278480	chr2:149278480:C:G	rs116971874	C	G	C	Hoxc9_MA0485.1	12	1	+	9.939618205482782	9.221562426567903	GACCGTAAATCTC
chr2	149490781	149490782	chr2:149490782:G:C	rs72992991	G	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	149580745	149580746	chr2:149580746:A:G	rs75395224	A	G	A	Hoxc9_MA0485.1	11	1	+	9.42531101487524	5.012777616006871	ACCCATCAATCAT
chr2	149701331	149701332	chr2:149701332:A:G	rs4667407	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	150188212	150188213	chr2:150188213:A:G	rs73968341	A	G	A	Hoxc9_MA0485.1	6	1	+	10.045568332279634	7.011362565770212	GAACATAAATCAC
chr2	150208283	150208284	chr2:150208284:G:A	rs4667341	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	150280287	150280288	chr2:150280288:G:A	rs141104256	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	150389577	150389578	chr2:150389578:G:A	rs1545231	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	150587818	150587819	chr2:150587819:G:C	rs4233661	G	C	C	Hoxc9_MA0485.1	12	1	+	8.814532296941533	9.532588075856411	TATCATAAATCAG
chr2	150716162	150716163	chr2:150716163:T:C	rs10210226	T	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	150716202	150716203	chr2:150716203:G:A	rs10171399	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	150811390	150811391	chr2:150811391:G:T	rs1519773	G	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	150856964	150856965	chr2:150856965:T:C	rs59626949	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	150933166	150933167	chr2:150933167:T:C	rs72864611	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	150998196	150998197	chr2:150998197:A:T	rs2341844	A	T	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	151031081	151031082	chr2:151031082:A:C	rs368784029	A	C	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	151111895	151111896	chr2:151111896:A:T	rs4374368	A	T	A	Hoxc9_MA0485.1	12	1	+	10.228460637150343	10.81819981913414	AGACATAAATCAA
chr2	151229497	151229498	chr2:151229498:T:C	rs289905	T	C	T	Hoxc9_MA0485.1	12	1	+	9.44570310073499	9.699700054499543	GATTATAAATCAT
chr2	151238921	151238922	chr2:151238922:G:A	rs753507131	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	151337718	151337719	chr2:151337719:C:T	rs11682727	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	151478865	151478866	chr2:151478866:T:C	rs6733645	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	151971766	151971767	chr2:151971767:C:G	rs7607341	C	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	151979940	151979941	chr2:151979941:A:G	rs11893938	A	G	G	Hoxc9_MA0485.1	6	1	+	9.619389786413345	6.585184019903925	AGAAATAAATCAG
chr2	151999141	151999142	chr2:151999142:A:C	rs80056271	A	C	C	Hoxc9_MA0485.1	8	1	+	9.056888801781938	4.206486629837277	GACAATCAATCAC
chr2	151999157	151999158	chr2:151999158:C:T	rs140995858	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	152004805	152004806	chr2:152004806:A:G	rs150310751	A	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	152004827	152004828	chr2:152004828:T:C	rs114566981	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	152234456	152234457	chr2:152234457:T:A	rs10497098	T	A	T	Hoxc9_MA0485.1	10	1	+	9.086726879300127	8.206562449734928	TGCAATAAATTAA
chr2	152388972	152388973	chr2:152388973:G:A	rs10931079	G	A	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	152580485	152580486	chr2:152580486:A:G	rs16831410	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	152804474	152804475	chr2:152804475:G:C	rs1896292	G	C	g	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	152875076	152875077	chr2:152875077:G:A	rs72862165	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	153005205	153005206	chr2:153005206:T:C	rs1260273725	T	C	T	Hoxc9_MA0485.1	8	1	-	7.759904996236036	0.8579464861010753	ACACATCAATCAC
chr2	153072555	153072556	chr2:153072556:C:T	rs11681154	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	153223327	153223328	chr2:153223328:T:C	rs13021536	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	153274058	153274059	chr2:153274059:G:A	rs75283276	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	153308314	153308315	chr2:153308315:G:T	rs4664664	G	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	153479659	153479660	chr2:153479660:G:A	rs67092640	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	153940597	153940598	chr2:153940598:A:G	rs74362097	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	153940600	153940601	chr2:153940601:T:C	rs1519203	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	154704248	154704249	chr2:154704249:G:C	rs7596632	G	C	C	Hoxc9_MA0485.1	1	1	+	9.46386327568015	8.324902794348475	AGCCATAAATAAA
chr2	155157254	155157255	chr2:155157255:T:C	rs75444339	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	155830984	155830985	chr2:155830985:G:A	rs34110901	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	155841468	155841469	chr2:155841469:G:A	rs9288535	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	155930416	155930417	chr2:155930417:C:T	rs10189214	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	156095021	156095022	chr2:156095022:C:T	rs2882619	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	156199793	156199794	chr2:156199794:C:A	rs75538066	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	156340389	156340390	chr2:156340390:T:A	rs541831948	T	A	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	156342550	156342551	chr2:156342551:C:T	rs572507163	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	156448741	156448742	chr2:156448742:T:C	rs298233	T	C	T	Hoxc9_MA0485.1	11	1	+	8.15565505316365	6.960254583473594	GCAAATAAATCTG
chr2	156493377	156493378	chr2:156493378:A:G	rs141277634	A	G	A	Hoxc9_MA0485.1	12	1	-	8.685036437982992	8.939033391747545	ACCTGTAAATCTT
chr2	157182615	157182616	chr2:157182616:C:G	rs138738269	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	157459944	157459945	chr2:157459945:G:A	rs78796964	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	157472958	157472959	chr2:157472959:A:C	rs2198581	A	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	158357367	158357368	chr2:158357368:G:T	rs13399899	G	T	T	Hoxc9_MA0485.1	3	1	-	8.589867724414253	7.855116516843784	GCCCATAAATATT
chr2	158567359	158567360	chr2:158567360:A:G	rs10933492	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	158726890	158726891	chr2:158726891:C:T	rs143050833	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	158753779	158753780	chr2:158753780:G:A	rs11681670	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	158766733	158766734	chr2:158766734:G:T	rs967381	G	T	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	159185686	159185687	chr2:159185687:G:A	rs17494014	G	A	G	Hoxc9_MA0485.1	0	1	+	10.110474957957262	9.57765982466626	GGGCATAAATCAG
chr2	159285068	159285069	chr2:159285069:G:A	rs11675075	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	159462296	159462297	chr2:159462297:C:T	rs76076124	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	159462318	159462319	chr2:159462319:A:C	rs56003035	A	C	A	Hoxc9_MA0485.1	7	1	+	9.176383307833065	2.2721542386274853	GTTTATAAATCAC
chr2	160096718	160096719	chr2:160096719:C:T	rs75027364	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	160210350	160210351	chr2:160210351:T:C	rs6750639	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	160255323	160255324	chr2:160255324:G:T	rs144310559	G	T	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	160494200	160494201	chr2:160494201:G:T	rs77838650	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	160494212	160494213	chr2:160494213:A:G	rs115725416	A	G	A	Hoxc9_MA0485.1	5	1	-	8.867051474941832	4.381740112303347	GGCATTAAATCAT
chr2	160516770	160516771	chr2:160516771:G:A	rs115117177	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	160952454	160952455	chr2:160952455:T:C	rs1722642	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	161135146	161135147	chr2:161135147:G:A	rs3754978	G	A	G	Hoxc9_MA0485.1	3	1	-	9.603081418401292	8.714828645378669	AGTCGTAAATCAA
chr2	161338239	161338240	chr2:161338240:C:T	rs114785989	C	T	c	Hoxc9_MA0485.1	12	1	+	10.299511067971071	10.045514114206519	AGCTATAAATTAC
chr2	161709534	161709535	chr2:161709535:T:G	rs16846053	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	162036769	162036770	chr2:162036770:T:C	rs2284869	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	162067819	162067820	chr2:162067820:A:G	rs6727102	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	162965458	162965459	chr2:162965459:C:T	rs7585233	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	163066832	163066833	chr2:163066833:C:T	rs12692677	C	T	C	Hoxc9_MA0485.1	2	1	+	8.830925348954224	7.453906871793	CACAATAAATCTT
chr2	163264581	163264582	chr2:163264582:T:C	rs78462666	T	C	T	Hoxc9_MA0485.1	8	1	-	8.054879057230975	1.152920547096014	AGCAGTGAATCAC
chr2	163346454	163346455	chr2:163346455:C:T	rs1221516	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	163736328	163736329	chr2:163736329:G:T	rs1008239550	G	T	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	163860439	163860440	chr2:163860440:T:G	rs17810888	T	G	T	Hoxc9_MA0485.1	7	1	-	10.289906444605212	3.3856773753996334	AACTATAAATCAT
chr2	163987649	163987650	chr2:163987650:T:C	rs180690293	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	164617483	164617484	chr2:164617484:C:T	rs569448161	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	164651332	164651333	chr2:164651333:C:T	rs6754919	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	164783677	164783678	chr2:164783678:T:G	rs11691338	T	G	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr2	164860273	164860274	chr2:164860274:G:A	rs355802	G	A	A	Hoxc9_MA0485.1	2	1	+	7.0762691914478415	7.852750360765396	GGGCATGAATCAG
chr2	164896767	164896768	chr2:164896768:A:G	rs111271104	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	165171628	165171629	chr2:165171629:A:G	rs11903523	A	G	A	Hoxc9_MA0485.1	4	1	+	9.930015676948841	8.762251962957258	AGCTATCAATCAC
chr2	165201169	165201170	chr2:165201170:G:A	rs73021836	G	A	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	165640508	165640509	chr2:165640509:G:A	chr2:165640509:G:A	G	A	G	Hoxc9_MA0485.1	10	1	-	7.623028868285209	5.819192963976457	AGCTATCAATCCT
chr2	165864728	165864729	chr2:165864729:T:C	rs962502	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	166179327	166179328	chr2:166179328:G:A	rs115056333	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	166193435	166193436	chr2:166193436:G:A	rs16851730	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	166412076	166412077	chr2:166412077:C:T	rs75496810	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	166676916	166676917	chr2:166676917:A:G	rs906898	A	G	a	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	166818845	166818846	chr2:166818846:A:G	rs79319705	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	167137435	167137436	chr2:167137436:G:C	rs116409606	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	167287393	167287394	chr2:167287394:G:A	rs60988732	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	167584672	167584673	chr2:167584673:G:A	rs1367918	G	A	G	Hoxc9_MA0485.1	12	1	+	7.505572927787578	7.379892570954108	GGCTATAAATCGG
chr2	167753299	167753300	chr2:167753300:G:A	rs144571496	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	167966454	167966455	chr2:167966455:T:C	rs12613574	T	C	T	Hoxc9_MA0485.1	5	1	+	9.413592165621063	4.928280802982581	GGCCATAAATTCT
chr2	168069686	168069687	chr2:168069687:G:A	rs77565840	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	168087616	168087617	chr2:168087617:A:T	rs75094419	A	T	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	168150330	168150331	chr2:168150331:A:G	rs1400641	A	G	A	Hoxc9_MA0485.1	4	1	+	9.25875624522408	8.090992531232494	AAACATAAATCAT
chr2	168185259	168185260	chr2:168185260:A:G	rs4668044	A	G	A	Hoxc9_MA0485.1	3	1	+	11.480301965592675	6.6986567011774545	TGCAATAAATCAT
chr2	168364318	168364319	chr2:168364319:C:T	rs3931951	C	T	C	Hoxc9_MA0485.1	1	1	+	10.290380141185674	9.34658030194081	GCTCATAAATCAG
chr2	168427578	168427579	chr2:168427579:G:A	rs1452286	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	168427583	168427584	chr2:168427584:C:T	rs1993158	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	168460912	168460913	chr2:168460913:G:C	rs77001493	G	C	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	168699546	168699547	chr2:168699547:G:A	rs6709565	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	169364387	169364388	chr2:169364388:C:T	rs532352452	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	169365399	169365400	chr2:169365400:C:A	rs830952	C	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	169901332	169901333	chr2:169901333:T:C	rs16857251	T	C	T	Hoxc9_MA0485.1	10	1	+	9.285248919431643	11.089084823740395	AGCAGTAAATTAC
chr2	169964978	169964979	chr2:169964979:A:G	chr2:169964979:A:G	A	G	A	Hoxc9_MA0485.1	11	1	-	10.106104344296618	8.91070387460656	GCCCGTAAATCTT
chr2	170087704	170087705	chr2:170087705:G:A	rs35270111	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	170087736	170087737	chr2:170087737:A:G	rs10930399	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	170097246	170097247	chr2:170097247:A:G	rs12053414	A	G	A	Hoxc9_MA0485.1	7	1	+	7.828535808480775	0.9243067392751961	TGCTATGAATCAG
chr2	170142665	170142666	chr2:170142666:G:A	rs12474899	G	A	G	Hoxc9_MA0485.1	0	1	-	8.82276654877214	9.05511020629151	CGGCATAAATCAG
chr2	170362636	170362637	chr2:170362637:A:G	rs1356589	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	170421193	170421194	chr2:170421194:C:T	rs13011668	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	170475937	170475938	chr2:170475938:T:C	rs10200118	T	C	T	Hoxc9_MA0485.1	12	1	+	8.602619744354001	8.856616698118554	TACCATAAATCCT
chr2	170475953	170475954	chr2:170475954:C:T	rs7607878	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	170574289	170574290	chr2:170574290:T:G	rs58351027	T	G	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	170715245	170715246	chr2:170715246:G:A	rs186745331	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	172020191	172020192	chr2:172020192:G:A	rs62183811	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	172096822	172096823	chr2:172096823:C:T	rs73976554	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr2	172227352	172227353	chr2:172227353:C:G	rs10198133	C	G	G	Hoxc9_MA0485.1	4	1	-	10.264392457400804	6.294229490142729	AACCGTAAATCAC
chr2	172349145	172349146	chr2:172349146:C:T	chr2:172349146:C:T	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	172508316	172508317	chr2:172508317:G:A	rs72892568	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	172510275	172510276	chr2:172510276:A:G	rs7565216	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	172739934	172739935	chr2:172739935:G:A	rs13000099	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	172739966	172739967	chr2:172739967:T:C	rs74493482	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	172861213	172861214	chr2:172861214:C:T	rs3769293	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	172889048	172889049	chr2:172889049:C:T	rs3769276	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	172928553	172928554	chr2:172928554:T:C	rs3769258	T	C	T	Hoxc9_MA0485.1	4	1	-	8.968645817458006	7.8008821034664235	AGCAATGAATCAT
chr2	172954197	172954198	chr2:172954198:T:G	rs74813388	T	G	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	173016748	173016749	chr2:173016749:C:T	rs72909440	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	173050046	173050047	chr2:173050047:T:C	rs3769210	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	173051687	173051688	chr2:173051688:A:T	chr2:173051688:A:T	A	T	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	173425226	173425227	chr2:173425227:C:T	rs6433409	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	173425264	173425265	chr2:173425265:T:C	rs6433410	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	173522924	173522925	chr2:173522925:C:G	rs2358263	C	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	174163561	174163562	chr2:174163562:A:G	rs58610158	A	G	g	Hoxc9_MA0485.1	0	1	+	8.91139663604907	9.444211769340072	ACCTATAAATCCC
chr2	174335398	174335399	chr2:174335399:A:C	rs1868600	A	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	174335855	174335856	chr2:174335856:A:G	rs541885847	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	174335877	174335878	chr2:174335878:G:T	rs139486714	G	T	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	174624138	174624139	chr2:174624139:G:C	rs115598990	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	174698958	174698959	chr2:174698959:A:G	rs7420834	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	174723363	174723364	chr2:174723364:A:C	rs10166894	A	C	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	175004015	175004016	chr2:175004016:G:T	rs144986684	G	T	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	175233259	175233260	chr2:175233260:G:A	rs141004317	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	175233281	175233282	chr2:175233282:C:T	rs4972748	C	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	175270396	175270397	chr2:175270397:G:A	rs12611773	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	175326807	175326808	chr2:175326808:A:G	rs115010480	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	175370872	175370873	chr2:175370873:C:T	rs117075983	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	175431264	175431265	chr2:175431265:G:A	rs184292968	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	175435163	175435164	chr2:175435164:G:T	rs2461760	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	175536064	175536065	chr2:175536065:A:C	rs13390826	A	C	C	Hoxc9_MA0485.1	5	1	-	8.122384308250155	1.223841332530559	AGGCATCAATCAC
chr2	175781977	175781978	chr2:175781978:G:C	rs72922452	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	176081780	176081781	chr2:176081781:C:A	rs76494921	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	176098480	176098481	chr2:176098481:A:G	rs147871181	A	G	A	Hoxc9_MA0485.1	4	1	+	7.386304297463668	6.218540583472085	CGCCATAACTCAC
chr2	176100900	176100901	chr2:176100901:A:G	rs116739197	A	G	A	Hoxc9_MA0485.1	1	1	-	8.528048685793683	9.471848525038547	GTCTGTAAATCTC
chr2	176164357	176164358	chr2:176164358:C:T	rs2857541	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	176297188	176297189	chr2:176297189:A:G	rs116078454	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	176582917	176582918	chr2:176582918:A:T	rs16864041	A	T	A	Hoxc9_MA0485.1	10	1	-	8.456462766882531	7.576298337317333	ACCAATAAATTTC
chr2	176643956	176643957	chr2:176643957:C:T	rs55746644	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	176668933	176668934	chr2:176668934:C:T	rs78966616	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	176818842	176818843	chr2:176818843:T:C	rs115787600	T	C	T	Hoxc9_MA0485.1	5	1	+	7.993262561624316	3.507951198985831	CACCATAAATAAC
chr2	177075318	177075319	chr2:177075319:G:A	rs7578683	G	A	g	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	177093606	177093607	chr2:177093607:C:T	rs1822692	C	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	177546346	177546347	chr2:177546347:A:G	rs4893961	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	177606878	177606879	chr2:177606879:G:A	rs79557996	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	177619712	177619713	chr2:177619713:A:G	rs116183267	A	G	A	Hoxc9_MA0485.1	6	1	+	11.273868058288201	8.239662291778782	GCCCATAAATCTT
chr2	177670107	177670108	chr2:177670108:G:A	rs6757651	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	177681169	177681170	chr2:177681170:C:T	rs9679360	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	177717203	177717204	chr2:177717204:T:A	rs72947187	T	A	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	178006022	178006023	chr2:178006023:A:C	rs13026481	A	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	178009200	178009201	chr2:178009201:A:T	rs17687170	A	T	T	Hoxc9_MA0485.1	4	1	+	8.212958511020174	4.544343268703575	TTCCATCAATCAC
chr2	178047891	178047892	chr2:178047892:G:A	rs73972673	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	178451995	178451996	chr2:178451996:T:C	rs78717143	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	178922601	178922602	chr2:178922602:T:C	rs4894066	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	179276896	179276897	chr2:179276897:G:A	rs6713924	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	179440641	179440642	chr2:179440642:C:A	rs34383794	C	A	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	179454937	179454938	chr2:179454938:T:C	rs116588569	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	179965523	179965524	chr2:179965524:A:G	rs10497554	A	G	A	Hoxc9_MA0485.1	4	1	+	8.234543176428035	7.0667794624364495	CTACATAAATCAC
chr2	180061233	180061234	chr2:180061234:T:C	rs2672662	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	180062990	180062991	chr2:180062991:G:C	rs7589530	G	C	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	180086624	180086625	chr2:180086625:G:A	rs77658808	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	180449719	180449720	chr2:180449720:C:T	rs73038104	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	180479118	180479119	chr2:180479119:C:T	rs113703571	C	T	C	Hoxc9_MA0485.1	1	1	-	10.83803469600192	9.278591122091859	TGTCATAAATCAT
chr2	180505128	180505129	chr2:180505129:C:T	rs12471899	C	T	C	Hoxc9_MA0485.1	3	1	+	7.720233199826581	6.831980426803956	GCTCATGAATCAT
chr2	180567852	180567853	chr2:180567853:T:C	rs17602848	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	181077308	181077309	chr2:181077309:T:C	rs11902957	T	C	T	Hoxc9_MA0485.1	5	1	+	9.819673510289244	5.334362147650759	CACCATAAATCTC
chr2	181077309	181077310	chr2:181077310:A:G	rs2176550	A	G	A	Hoxc9_MA0485.1	6	1	+	9.819673510289244	6.785467743779823	CACCATAAATCTC
chr2	181372042	181372043	chr2:181372043:C:T	rs79356370	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	181561146	181561147	chr2:181561147:C:T	rs113255116	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	181785812	181785813	chr2:181785813:T:A	rs13399033	T	A	T	Hoxc9_MA0485.1	11	1	-	10.083448611563671	9.225859226354649	AGAAATAAATCAT
chr2	181995694	181995695	chr2:181995695:A:G	rs1153741	A	G	A	Hoxc9_MA0485.1	4	1	+	8.996079442864545	7.828315728872963	AACAATAAATCTA
chr2	182088182	182088183	chr2:182088183:A:C	rs1196149	A	C	C	Hoxc9_MA0485.1	9	1	-	9.573289211005616	2.6850633966319846	ACCCGTAAATCTT
chr2	182141823	182141824	chr2:182141824:C:A	rs4666577	C	A	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	182280525	182280526	chr2:182280526:A:G	rs72897061	A	G	A	Hoxc9_MA0485.1	5	1	-	8.059651100581434	3.574339737942948	GACTATCAATCAA
chr2	182447685	182447686	chr2:182447686:T:C	rs74575794	T	C	T	Hoxc9_MA0485.1	9	1	+	9.730830650435015	2.8426048360613847	AACCATAAATCTA
chr2	182617145	182617146	chr2:182617146:A:C	rs1997239	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	182617157	182617158	chr2:182617158:T:C	rs71427856	T	C	T	Hoxc9_MA0485.1	6	1	-	11.432156171392387	8.397950404882966	AACCATAAATCAC
chr2	182655994	182655995	chr2:182655995:T:C	rs13397013	T	C	T	Hoxc9_MA0485.1	4	1	-	8.540769097146525	7.3730053831549425	AACCATCAATCAG
chr2	182715439	182715440	chr2:182715440:T:G	rs138792540	T	G	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	183036023	183036024	chr2:183036024:A:C	rs3791246	A	C	A	Hoxc9_MA0485.1	7	1	+	8.80780246303234	1.9035733938267618	TTCAATAAATCAA
chr2	183216345	183216346	chr2:183216346:G:A	rs16824171	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	183495310	183495311	chr2:183495311:G:A	rs919978939	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	183592505	183592506	chr2:183592506:G:A	rs34376551	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	183759334	183759335	chr2:183759335:G:T	rs80108635	G	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	183893439	183893440	chr2:183893440:C:T	rs826144	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	184154364	184154365	chr2:184154365:A:G	rs13025532	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	185171396	185171397	chr2:185171397:G:T	rs62198555	G	T	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	185276635	185276636	chr2:185276636:C:G	rs10931166	C	G	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	186762839	186762840	chr2:186762840:G:A	rs2595381	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	186841437	186841438	chr2:186841438:T:G	rs62171892	T	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	187010234	187010235	chr2:187010235:T:A	rs4667140	T	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	187079866	187079867	chr2:187079867:C:T	rs72906928	C	T	c	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	187187813	187187814	chr2:187187814:C:A	rs11894499	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr2	187346384	187346385	chr2:187346385:C:T	rs3771095	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	187509977	187509978	chr2:187509978:C:T	rs72906206	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	187593326	187593327	chr2:187593327:C:T	rs73982974	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	187923135	187923136	chr2:187923136:C:T	rs115113664	C	T	C	Hoxc9_MA0485.1	4	1	-	10.010395503636252	11.178159217627835	AACCGTAAATCAT
chr2	188305354	188305355	chr2:188305355:G:A	rs75221977	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	188518116	188518117	chr2:188518117:A:G	rs34005308	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	188835029	188835030	chr2:188835030:G:A	rs10172458	G	A	A	Hoxc9_MA0485.1	1	1	+	8.962021102522955	7.402577528612894	GGCAATAAAACAC
chr2	189076175	189076176	chr2:189076176:C:T	rs7592230	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	189115209	189115210	chr2:189115210:T:C	rs62182413	T	C	t	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	189210989	189210990	chr2:189210990:G:A	rs75118903	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	189217232	189217233	chr2:189217233:A:T	rs192650736	A	T	A	Hoxc9_MA0485.1	8	1	+	8.290570642224392	1.3886121320894342	GGTCATAAATTCC
chr2	189369975	189369976	chr2:189369976:A:C	rs79351150	A	C	a	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	189566004	189566005	chr2:189566005:A:G	rs57782175	A	G	A	Hoxc9_MA0485.1	1	1	+	10.38648396136457	11.945927535274631	GACAATAAATCAA
chr2	189587859	189587860	chr2:189587860:T:C	rs6718798	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	189836940	189836941	chr2:189836941:G:A	rs1233248	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	190160992	190160993	chr2:190160993:T:A	rs72913465	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	190501980	190501981	chr2:190501981:A:G	rs1128723	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	190702814	190702815	chr2:190702815:G:C	rs62179714	G	C	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	190708775	190708776	chr2:190708776:T:G	rs10153559	T	G	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	190741032	190741033	chr2:190741033:G:A	rs1263122	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	190965050	190965051	chr2:190965051:C:T	rs1168	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	190986039	190986040	chr2:190986040:C:A	rs2280232	C	A	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	191189304	191189305	chr2:191189305:T:C	rs57235797	T	C	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr2	191202690	191202691	chr2:191202691:T:C	rs116723738	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	191202692	191202693	chr2:191202693:T:C	rs749363394	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	191441780	191441781	chr2:191441781:A:G	rs74865805	A	G	A	Hoxc9_MA0485.1	4	1	+	8.924346061908347	7.756582347916765	CCACATAAATCAT
chr2	191441799	191441800	chr2:191441800:A:G	rs76546393	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	191446625	191446626	chr2:191446626:T:G	rs7594764	T	G	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	191543742	191543743	chr2:191543743:A:G	rs7561808	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	191570420	191570421	chr2:191570421:A:C	rs55956171	A	C	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	191692272	191692273	chr2:191692273:T:C	rs6708956	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	191841019	191841020	chr2:191841020:A:G	rs79566098	A	G	A	Hoxc9_MA0485.1	5	1	-	10.246330712033272	5.761019349394787	ACCTATAAATCAG
chr2	191927588	191927589	chr2:191927589:C:T	rs112193001	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	192120205	192120206	chr2:192120206:A:G	rs62180400	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	192187118	192187119	chr2:192187119:G:A	rs6752021	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	192193948	192193949	chr2:192193949:T:C	rs73984914	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	193055463	193055464	chr2:193055464:A:G	rs12474870	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	193187904	193187905	chr2:193187905:C:T	rs13383214	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	193501833	193501834	chr2:193501834:C:G	rs4850333	C	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	193576202	193576203	chr2:193576203:A:T	rs4145308	A	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	195546834	195546835	chr2:195546835:A:C	rs59017643	A	C	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	195580500	195580501	chr2:195580501:T:C	rs17793759	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	195641239	195641240	chr2:195641240:C:A	rs10460389	C	A	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	195903990	195903991	chr2:195903991:A:G	rs148579567	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	196133590	196133591	chr2:196133591:C:T	rs6741307	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	196142544	196142545	chr2:196142545:A:T	rs2889145	A	T	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	196177177	196177178	chr2:196177178:C:T	rs186922524	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	196177178	196177179	chr2:196177179:T:G	rs74676051	T	G	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	196248972	196248973	chr2:196248973:G:A	rs10931734	G	A	G	Hoxc9_MA0485.1	10	1	-	8.20899890396518	6.4051629996564285	GCCTATGAATCAT
chr2	196264678	196264679	chr2:196264679:T:C	rs10187086	T	C	T	Hoxc9_MA0485.1	3	1	-	7.889125087790352	3.1074798233751304	GACAGTCAATCAC
chr2	196355098	196355099	chr2:196355099:A:C	rs10183987	A	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr2	196639946	196639947	chr2:196639947:C:A	rs116247076	C	A	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	197054684	197054685	chr2:197054685:G:A	rs2376204	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	197170339	197170340	chr2:197170340:C:G	rs11894999	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	197273745	197273746	chr2:197273746:C:T	rs116220125	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	197279814	197279815	chr2:197279815:C:T	rs4850785	C	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	197828978	197828979	chr2:197828979:C:T	rs700674	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	198014718	198014719	chr2:198014719:T:A	rs62277902	T	A	T	Hoxc9_MA0485.1	12	1	-	9.11365784304468	9.703397025028476	AGCCATGAATCAA
chr2	198251554	198251555	chr2:198251555:A:G	rs16829036	A	G	A	Hoxc9_MA0485.1	8	1	+	9.003131149634207	2.101172639499249	GCCAATAAATTAA
chr2	198706755	198706756	chr2:198706756:T:C	rs1356486	T	C	t	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	198749345	198749346	chr2:198749346:A:G	rs1533528	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	198807127	198807128	chr2:198807128:G:A	rs10497823	G	A	G	Hoxc9_MA0485.1	10	1	-	9.187978947070611	7.384143042761859	GAACATAAATCTC
chr2	199130144	199130145	chr2:199130145:T:C	rs1451487	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	199902788	199902789	chr2:199902789:C:T	rs1658807	C	T	T	Hoxc9_MA0485.1	1	1	-	8.05237083782885	6.492927263918788	AGCCATAAAACTT
chr2	200042699	200042700	chr2:200042700:A:G	rs12477694	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	200172716	200172717	chr2:200172717:A:T	rs13022996	A	T	A	Hoxc9_MA0485.1	8	1	+	7.560360358202877	0.658401848067917	AGCAGTTAATCAC
chr2	200701246	200701247	chr2:200701247:A:G	rs2540054	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	200711560	200711561	chr2:200711561:A:G	rs7563911	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	200825018	200825019	chr2:200825019:C:T	rs12995928	C	T	-	Hoxc9_MA0485.1	26	0	+	0	0	.
chr2	201533747	201533748	chr2:201533748:T:C	rs4675149	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	201533763	201533764	chr2:201533764:T:C	rs4673180	T	C	C	Hoxc9_MA0485.1	6	1	-	9.716944397898565	6.682738631389146	GGGCATAAATCTT
chr2	201715544	201715545	chr2:201715545:T:C	rs10469756	T	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	201926263	201926264	chr2:201926264:C:A	rs6713805	C	A	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr2	202064421	202064422	chr2:202064422:A:G	rs577330231	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	202152338	202152339	chr2:202152339:G:A	rs13007734	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	202687397	202687398	chr2:202687398:T:C	rs558757362	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	202910751	202910752	chr2:202910752:G:A	rs72936852	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	203361279	203361280	chr2:203361280:G:T	rs12474416	G	T	G	Hoxc9_MA0485.1	2	1	+	7.159915494555542	8.478781159115629	GGGCTTAAATCAC
chr2	203567880	203567881	chr2:203567881:T:C	rs6730171	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	203596422	203596423	chr2:203596423:A:C	rs60912614	A	C	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	203628927	203628928	chr2:203628928:G:C	rs2352405	G	C	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	203681672	203681673	chr2:203681673:C:A	chr2:203681673:C:A	C	A	.	Hoxc9_MA0485.1	2	1	+	9.263060969990779	7.343657997587025	ACCTATAAATCTA
chr2	203840872	203840873	chr2:203840873:G:T	rs73055455	G	T	g	Hoxc9_MA0485.1	10	1	-	8.944556761069322	6.260556427195371	ACCAATCAATCAC
chr2	203869484	203869485	chr2:203869485:A:G	rs531963406	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	203899158	203899159	chr2:203899159:A:C	rs3096851	A	C	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	204108541	204108542	chr2:204108542:T:C	rs11899145	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	204315317	204315318	chr2:204315318:C:T	rs2353850	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	204340187	204340188	chr2:204340188:C:T	rs140076797	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	204850521	204850522	chr2:204850522:G:A	rs10469651	G	A	A	Hoxc9_MA0485.1	6	1	-	8.924414692745673	7.569021522539136	CCCCATCAATCAC
chr2	205337471	205337472	chr2:205337472:C:T	rs13011886	C	T	C	Hoxc9_MA0485.1	2	1	+	9.654957863904631	8.277939386743405	GACTGTAAATCAT
chr2	205358044	205358045	chr2:205358045:C:T	rs2336420	C	T	C	Hoxc9_MA0485.1	3	1	+	7.7758229026803365	6.887570129657713	GGACGTAAATTTC
chr2	205586197	205586198	chr2:205586198:G:A	rs7605598	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	205731085	205731086	chr2:205731086:C:T	rs3771033	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr2	205821539	205821540	chr2:205821540:C:T	rs80098272	C	T	C	Hoxc9_MA0485.1	2	1	+	9.959207116583388	8.582188639422165	CACCATAAATCAG
chr2	205827952	205827953	chr2:205827953:T:C	rs1861624	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	206020468	206020469	chr2:206020469:C:A	rs817999	C	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	206888073	206888074	chr2:206888074:G:A	rs73057482	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	206888096	206888097	chr2:206888097:T:C	rs12469619	T	C	T	Hoxc9_MA0485.1	5	1	+	8.751687112465854	4.266375749827371	AGCAATAAATTTA
chr2	207086621	207086622	chr2:207086622:C:T	rs34546946	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	207107487	207107488	chr2:207107488:G:A	rs1263604	G	A	G	Hoxc9_MA0485.1	0	1	+	12.356651164601866	11.823836031310865	GGCCGTAAATCAC
chr2	207125113	207125114	chr2:207125114:T:C	rs28485530	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	207335699	207335700	chr2:207335700:C:G	rs17201911	C	G	C	Hoxc9_MA0485.1	0	1	-	7.83934001807922	6.551631608894097	GGAAATCAATCTC
chr2	207471340	207471341	chr2:207471341:A:G	rs889894	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	207471367	207471368	chr2:207471368:T:C	rs6748416	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	207817476	207817477	chr2:207817477:T:A	rs78388533	T	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	207824590	207824591	chr2:207824591:C:T	rs188173101	C	T	C	Hoxc9_MA0485.1	0	1	-	8.919762874793282	8.38694774150228	GTCCATAAATTAG
chr2	207952477	207952478	chr2:207952478:T:C	rs12993052	T	C	T	Hoxc9_MA0485.1	2	1	+	8.930580934267274	10.3075994114285	AGTCATAAATAAC
chr2	208143880	208143881	chr2:208143881:A:G	rs2362791	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	208189542	208189543	chr2:208189543:C:G	rs6704765	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	208189592	208189593	chr2:208189593:G:A	rs142879950	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	208320630	208320631	chr2:208320631:C:T	rs10932260	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	208632224	208632225	chr2:208632225:T:C	rs13394305	T	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr2	208827465	208827466	chr2:208827466:T:C	rs4638727	T	C	C	Hoxc9_MA0485.1	4	1	-	6.936735585153697	5.768971871162113	GGGCATGAATCTC
chr2	209090936	209090937	chr2:209090937:A:C	rs1371438	A	C	C	Hoxc9_MA0485.1	6	1	+	8.34747783870465	6.174146543373669	ACCCATAAATTTA
chr2	209469099	209469100	chr2:209469100:C:T	rs34173247	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	210517593	210517594	chr2:210517594:C:T	rs10932340	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr2	210901225	210901226	chr2:210901226:C:T	rs77523546	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	211177024	211177025	chr2:211177025:G:C	rs1370612	G	C	C	Hoxc9_MA0485.1	10	1	-	9.310817124709166	4.509746316961887	GAAAATAAATCAC
chr2	211178852	211178853	chr2:211178853:C:T	rs7572040	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr2	211429950	211429951	chr2:211429951:C:T	rs143195525	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	211863459	211863460	chr2:211863460:T:G	rs12694254	T	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	212249834	212249835	chr2:212249835:G:A	rs1402770	G	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	212463800	212463801	chr2:212463801:C:T	rs114024466	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	212639959	212639960	chr2:212639960:C:T	rs7587236	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	212818155	212818156	chr2:212818156:C:G	rs76287803	C	G	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	212818289	212818290	chr2:212818290:A:G	rs80160214	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	212913825	212913826	chr2:212913826:C:T	rs67254543	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	213188094	213188095	chr2:213188095:G:A	rs148617964	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	213766869	213766870	chr2:213766870:A:G	rs1023467305	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr2	213941350	213941351	chr2:213941351:T:C	rs953133	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	214577974	214577975	chr2:214577975:T:A	rs7568263	T	A	T	Hoxc9_MA0485.1	5	1	+	8.32637854786725	1.4278355721476559	AGTCATGAATCAT
chr2	214604959	214604960	chr2:214604960:T:G	rs184487546	T	G	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	214816404	214816405	chr2:214816405:T:G	rs10176190	T	G	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	215075518	215075519	chr2:215075519:T:C	rs6711179	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	215404178	215404179	chr2:215404179:C:T	rs7575234	C	T	C	Hoxc9_MA0485.1	4	1	-	8.87780461828805	10.045568332279634	GAACGTAAATCAC
chr2	215619729	215619730	chr2:215619730:C:G	rs10188310	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr2	215619740	215619741	chr2:215619741:A:T	rs59242305	A	T	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	215719799	215719800	chr2:215719800:C:T	rs1004071	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	215742486	215742487	chr2:215742487:G:A	rs12987160	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	215886039	215886040	chr2:215886040:A:G	rs72944517	A	G	.	Hoxc9_MA0485.1	10	1	+	7.555496910414943	5.438426436541615	GGCCATCAATATT
chr2	216025780	216025781	chr2:216025781:G:A	rs934153	G	A	G	Hoxc9_MA0485.1	6	1	+	7.325895531551749	10.36010129806117	GCCCGTGAATCTC
chr2	216083159	216083160	chr2:216083160:A:C	rs6729928	A	C	A	Hoxc9_MA0485.1	6	1	+	8.703375010801647	6.530043715470663	AGGAATAAATCTC
chr2	216115798	216115799	chr2:216115799:A:G	rs550259777	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr2	216492810	216492811	chr2:216492811:T:C	rs143590688	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	216636994	216636995	chr2:216636995:G:C	rs9341108	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr2	216881241	216881242	chr2:216881242:C:T	rs1179719	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr2	217048351	217048352	chr2:217048352:A:T	rs10174948	A	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	217160349	217160350	chr2:217160350:T:G	rs143300727	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	217225885	217225886	chr2:217225886:C:T	rs2553038	C	T	C	Hoxc9_MA0485.1	1	1	-	8.724962904225082	7.1655193303150195	CGAAATAAATCTC
chr2	217337233	217337234	chr2:217337234:A:G	rs12475411	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr2	217362564	217362565	chr2:217362565:T:G	rs78096412	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	217393803	217393804	chr2:217393804:C:T	rs7581803	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr2	217393806	217393807	chr2:217393807:T:C	rs16857473	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr2	217468474	217468475	chr2:217468475:G:A	rs1478584	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	217621747	217621748	chr2:217621748:C:T	rs62177914	C	T	C	Hoxc9_MA0485.1	12	1	+	8.90306744613769	8.649070492373138	GTCAATAAATTAC
chr2	217755571	217755572	chr2:217755572:G:C	rs183201949	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	217818415	217818416	chr2:217818416:G:A	rs34291329	G	A	G	Hoxc9_MA0485.1	10	1	-	9.298093728363385	7.494257824054634	GGCCATCAATCCC
chr2	217818430	217818431	chr2:217818431:A:G	rs2571445	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	217839514	217839515	chr2:217839515:A:G	rs1008835	A	G	a	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	217839515	217839516	chr2:217839516:T:C	rs72947948	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	218039376	218039377	chr2:218039377:T:C	rs57142838	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr2	218069236	218069237	chr2:218069237:T:C	rs13431952	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	218223240	218223241	chr2:218223241:C:T	rs141015685	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr2	218223272	218223273	chr2:218223273:T:C	rs7558119	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	218440127	218440128	chr2:218440128:C:A	rs58650092	C	A	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	219079603	219079604	chr2:219079604:C:T	rs568558028	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	219171336	219171337	chr2:219171337:C:A	chr2:219171337:C:A	C	A	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	219183998	219183999	chr2:219183999:A:G	rs12694453	A	G	A	Hoxc9_MA0485.1	9	1	-	9.044983518544395	2.156757704170762	ACATATAAATCAC
chr2	219200827	219200828	chr2:219200828:G:C	rs114672818	G	C	a	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	219200827	219200828	chr2:219200828:G:T	chr2:219200828:G:T	G	T	a	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	219253140	219253141	chr2:219253141:G:A	rs151236873	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	219420943	219420944	chr2:219420944:G:C	rs12920	G	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	219913212	219913213	chr2:219913213:T:C	rs59505527	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr2	219980678	219980679	chr2:219980679:T:C	rs4381770	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	219997687	219997688	chr2:219997688:A:G	rs34305871	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr2	220162548	220162549	chr2:220162549:G:T	rs4255955	G	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr2	220162556	220162557	chr2:220162557:T:C	rs4552183	T	C	T	Hoxc9_MA0485.1	11	1	-	7.1999928401721585	2.787459441303789	GGTTGTCAATCAG
chr2	220184720	220184721	chr2:220184721:T:A	rs11885183	T	A	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	220188325	220188326	chr2:220188326:T:C	rs10210710	T	C	C	Hoxc9_MA0485.1	12	1	+	10.075440956483018	10.32943791024757	GCCTGTAAATCAT
chr2	220217017	220217018	chr2:220217018:T:C	rs10207046	T	C	T	Hoxc9_MA0485.1	3	1	+	8.810821441647624	9.699074214670247	TCTTATAAATCAT
chr2	220334470	220334471	chr2:220334471:A:G	rs139265445	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr2	220334507	220334508	chr2:220334508:C:G	rs1584912	C	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	220552972	220552973	chr2:220552973:C:A	rs550086740	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr2	220930555	220930556	chr2:220930556:A:G	rs864589	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	221104527	221104528	chr2:221104528:G:A	rs28590725	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr2	221266130	221266131	chr2:221266131:A:G	chr2:221266131:A:G	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	221514671	221514672	chr2:221514672:G:A	rs10498116	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	221810434	221810435	chr2:221810435:A:T	rs116012661	A	T	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	222080331	222080332	chr2:222080332:T:C	rs348987	T	C	T	Hoxc9_MA0485.1	8	1	-	9.235015389519921	2.3330568793849613	TCTCATAAATCAG
chr2	222080344	222080345	chr2:222080345:G:A	rs78748503	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	222628185	222628186	chr2:222628186:G:A	rs1018002248	G	A	g	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	222971923	222971924	chr2:222971924:A:G	rs4294989	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	223005718	223005719	chr2:223005719:T:C	rs77244784	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	223047706	223047707	chr2:223047707:C:T	rs114757017	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	223051802	223051803	chr2:223051803:C:G	rs192770974	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	223452667	223452668	chr2:223452668:T:A	rs10194880	T	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr2	223930020	223930021	chr2:223930021:G:T	rs717610	G	T	T	Hoxc9_MA0485.1	4	1	+	9.285248919431643	6.784397391106629	AGCAGTAAATTAC
chr2	224926304	224926305	chr2:224926305:T:C	rs9288594	T	C	T	Hoxc9_MA0485.1	5	1	+	7.744940078814854	3.259628716176368	GCCTATGAATCAG
chr2	225008623	225008624	chr2:225008624:C:T	rs12474884	C	T	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	225008640	225008641	chr2:225008641:C:T	rs13418728	C	T	C	Hoxc9_MA0485.1	2	1	+	11.964971304683388	10.587952827522166	GACCATAAATCAC
chr2	225043339	225043340	chr2:225043340:C:T	rs10198304	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	225227065	225227066	chr2:225227066:G:T	rs17481193	G	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	225911271	225911272	chr2:225911272:G:C	rs11899060	G	C	G	Hoxc9_MA0485.1	10	1	-	9.304184896446854	4.5031140886995775	AGTAATAAATCTG
chr2	226079858	226079859	chr2:226079859:A:G	rs142834017	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr2	226209043	226209044	chr2:226209044:G:A	rs77591842	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	226211509	226211510	chr2:226211510:T:C	rs80094984	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	226384260	226384261	chr2:226384261:A:T	rs10498201	A	T	T	Hoxc9_MA0485.1	9	1	-	8.711708118956118	4.884065550456094	TGCTGTAAATCTA
chr2	226407335	226407336	chr2:226407336:T:C	rs12993707	T	C	C	Hoxc9_MA0485.1	2	1	+	8.985976303344962	10.362994780506186	CCTAATAAATCAC
chr2	226656572	226656573	chr2:226656573:A:G	rs4276016	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	226868768	226868769	chr2:226868769:C:T	rs16822814	C	T	T	Hoxc9_MA0485.1	3	1	+	7.5843835895144975	6.696130816491874	GCCCATAAATGAC
chr2	226982215	226982216	chr2:226982216:A:G	rs7563644	A	G	G	Hoxc9_MA0485.1	6	1	+	8.14119757335779	5.1069918068483675	AGCCATAACTCAC
chr2	227230235	227230236	chr2:227230236:G:A	rs62277839	G	A	G	Hoxc9_MA0485.1	4	1	+	7.810952817186963	8.978716531178545	GGCCGTAAAACAG
chr2	227253791	227253792	chr2:227253792:G:A	rs13409219	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr2	227324299	227324300	chr2:227324300:T:C	rs13004292	T	C	T	Hoxc9_MA0485.1	4	1	-	8.055129341819361	6.887365627827777	AGACATCAATCAA
chr2	227378360	227378361	chr2:227378361:T:C	rs76932510	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr2	227399944	227399945	chr2:227399945:C:G	rs13029710	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	227460827	227460828	chr2:227460828:T:G	rs4571042	T	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	227516316	227516317	chr2:227516317:T:C	rs76094228	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	227613579	227613580	chr2:227613580:C:A	rs11893140	C	A	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr2	227783014	227783015	chr2:227783015:T:C	rs58929142	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr2	228115184	228115185	chr2:228115185:G:A	rs10209576	G	A	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	228158192	228158193	chr2:228158193:G:A	rs76762410	G	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	228268851	228268852	chr2:228268852:C:T	rs1528223	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr2	228283479	228283480	chr2:228283480:A:G	rs13013897	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	228600132	228600133	chr2:228600133:A:C	rs2196399	A	C	a	Hoxc9_MA0485.1	7	1	+	8.568794807595145	1.6645657383895676	GACAATAAATTTC
chr2	228798587	228798588	chr2:228798588:A:G	rs776973	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	228916784	228916785	chr2:228916785:T:C	rs36052215	T	C	T	Hoxc9_MA0485.1	7	1	-	7.801365180058505	0.8971361108529259	TCCCATTAATCAC
chr2	228987213	228987214	chr2:228987214:T:C	rs13391429	T	C	.	Hoxc9_MA0485.1	13	0	+	0	0	.
chr2	229033939	229033940	chr2:229033940:T:C	chr2:229033940:T:C	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	229133481	229133482	chr2:229133482:T:A	rs2021750	T	A	A	Hoxc9_MA0485.1	7	1	-	9.410182602590327	4.214331393673755	GGCAATAAATTTG
chr2	229142061	229142062	chr2:229142062:C:T	rs62190382	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	229343580	229343581	chr2:229343581:G:C	rs115260917	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	229370478	229370479	chr2:229370479:T:A	rs721943	T	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	229418593	229418594	chr2:229418594:A:G	rs6735031	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	229616724	229616725	chr2:229616725:A:G	rs10174833	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	229661336	229661337	chr2:229661337:T:C	rs78893337	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr2	229753317	229753318	chr2:229753318:T:C	rs7423377	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	230108542	230108543	chr2:230108543:G:T	rs6705913	G	T	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	230335931	230335932	chr2:230335932:C:A	rs11890934	C	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr2	230416570	230416571	chr2:230416571:T:C	rs1427284	T	C	T	Hoxc9_MA0485.1	6	1	-	8.192358833092964	5.158153066583546	AGCAGTAAATCCA
chr2	230416586	230416587	chr2:230416587:G:A	rs527650838	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr2	230521053	230521054	chr2:230521054:T:C	rs144912351	T	C	T	Hoxc9_MA0485.1	5	1	+	7.643057128988846	3.1577457663503594	CACCATGAATCAC
chr2	230521066	230521067	chr2:230521067:C:T	rs1194083113	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	230563099	230563100	chr2:230563100:T:C	rs60947998	T	C	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	230748221	230748222	chr2:230748222:A:G	rs59884204	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	230850209	230850210	chr2:230850210:A:T	rs577206324	A	T	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	230895543	230895544	chr2:230895544:C:T	rs62195299	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	230895569	230895570	chr2:230895570:G:A	rs1866234	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	230963631	230963632	chr2:230963632:G:A	rs3106080	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	231199182	231199183	chr2:231199183:G:A	rs138409227	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	231480420	231480421	chr2:231480421:C:A	rs72989536	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	232913148	232913149	chr2:232913149:C:T	rs778364	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr2	233317713	233317714	chr2:233317714:T:C	rs76589744	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr2	233325979	233325980	chr2:233325980:A:G	rs3792100	A	G	G	Hoxc9_MA0485.1	3	1	+	8.346842422586345	3.5651971581711255	ACCAATAAATCCG
chr2	233545241	233545242	chr2:233545242:G:A	rs4047199	G	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr2	233566768	233566769	chr2:233566769:G:A	rs62192778	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	233566793	233566794	chr2:233566794:C:T	rs148158811	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr2	233816855	233816856	chr2:233816856:T:C	rs726016	T	C	C	Hoxc9_MA0485.1	12	1	-	8.708285915542264	8.833966272375735	GGACATAAATCCA
chr2	234150716	234150717	chr2:234150717:T:C	rs16850544	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	234279224	234279225	chr2:234279225:T:G	rs1019321636	T	G	T	Hoxc9_MA0485.1	8	1	-	8.933981993306059	4.0835798213614005	GAACATAAATCTT
chr2	234279228	234279229	chr2:234279229:T:C	rs6757144	T	C	T	Hoxc9_MA0485.1	4	1	-	8.933981993306059	7.766218279314476	GAACATAAATCTT
chr2	234286460	234286461	chr2:234286461:C:T	rs60884838	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	234533392	234533393	chr2:234533393:C:T	rs72617193	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	234535535	234535536	chr2:234535536:T:C	rs10205496	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	234600738	234600739	chr2:234600739:G:A	rs6748568	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	234605852	234605853	chr2:234605853:A:G	rs869214	A	G	A	Hoxc9_MA0485.1	9	1	-	8.094163487409098	1.2059376730354674	GGCAGTAAATAAA
chr2	234681066	234681067	chr2:234681067:G:C	rs12611896	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	234691118	234691119	chr2:234691119:C:T	rs548951488	C	T	C	Hoxc9_MA0485.1	2	1	+	10.486353509847673	9.10933503268645	TCCCATAAATCAA
chr2	234965786	234965787	chr2:234965787:G:A	rs114739058	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr2	234982930	234982931	chr2:234982931:G:A	rs10803627	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	235255089	235255090	chr2:235255090:T:C	rs2082295	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	235256153	235256154	chr2:235256154:A:G	rs12477347	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	235279162	235279163	chr2:235279163:G:T	rs11687541	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr2	235287775	235287776	chr2:235287776:G:A	rs1431796	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	235495714	235495715	chr2:235495715:T:G	chr2:235495715:T:G	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	235502770	235502771	chr2:235502771:T:C	rs12478171	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	235561922	235561923	chr2:235561923:C:A	rs6414040	C	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr2	235658418	235658419	chr2:235658419:G:A	rs190397997	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	235658453	235658454	chr2:235658454:G:A	rs181798514	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	235780652	235780653	chr2:235780653:T:C	rs547298956	T	C	T	Hoxc9_MA0485.1	4	1	-	8.268505577242417	7.100741863250831	TCCTATCAATCAC
chr2	235835981	235835982	chr2:235835982:T:A	rs4663617	T	A	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	235868648	235868649	chr2:235868649:A:G	rs4663212	A	G	A	Hoxc9_MA0485.1	3	1	+	9.595317011472867	4.813671747057647	GTCAATAAATCTT
chr2	236164769	236164770	chr2:236164770:C:T	rs60861832	C	T	c	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	236211460	236211461	chr2:236211461:T:C	rs1000688964	T	C	T	Hoxc9_MA0485.1	8	1	-	10.54964715452394	3.647688644388981	TGACATAAATCAC
chr2	236271442	236271443	chr2:236271443:T:G	rs1973041	T	G	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr2	236585690	236585691	chr2:236585691:C:T	rs6711119	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	236713137	236713138	chr2:236713138:A:C	rs79645570	A	C	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	236825665	236825666	chr2:236825666:A:G	rs10208502	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr2	236870516	236870517	chr2:236870517:G:A	rs73124019	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr2	236872549	236872550	chr2:236872550:G:A	rs4077980	G	A	A	Hoxc9_MA0485.1	12	1	-	8.3063677915934	8.05237083782885	AGCCATAAAACTC
chr2	236886258	236886259	chr2:236886259:C:T	rs111888592	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	236985585	236985586	chr2:236985586:C:T	rs1369692	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr2	237208673	237208674	chr2:237208674:T:C	rs62184783	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr2	237208692	237208693	chr2:237208693:C:T	rs73089850	C	T	C	Hoxc9_MA0485.1	6	1	-	8.01308369266214	11.04728945917156	TGCCGTGAATCAT
chr2	237208718	237208719	chr2:237208719:T:G	chr2:237208719:T:G	T	G	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr2	237291576	237291577	chr2:237291577:G:T	rs144764566	G	T	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr2	237315680	237315681	chr2:237315681:A:T	rs147839483	A	T	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	237315691	237315692	chr2:237315692:A:G	rs6744212	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr2	237317603	237317604	chr2:237317604:T:G	rs10803658	T	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr2	237354655	237354656	chr2:237354656:C:A	rs2645763	C	A	C	Hoxc9_MA0485.1	1	1	-	8.055129341819361	5.972369021242822	AGACATCAATCAA
chr2	237402968	237402969	chr2:237402969:C:T	rs2645779	C	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	237403000	237403001	chr2:237403001:G:A	rs3851966	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr2	237408196	237408197	chr2:237408197:T:C	rs116361793	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr2	237433081	237433082	chr2:237433082:C:T	rs930783008	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr2	237721001	237721002	chr2:237721002:A:T	rs78997532	A	T	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr2	237721009	237721010	chr2:237721010:T:A	rs113048333	T	A	A	Hoxc9_MA0485.1	6	1	-	9.323801698070845	5.795077232533328	GCATATAAATCAT
chr2	237730639	237730640	chr2:237730640:A:G	rs3769083	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr2	237730659	237730660	chr2:237730660:A:G	rs6721133	A	G	G	Hoxc9_MA0485.1	4	1	+	8.91139663604907	7.743632922057486	ACCTATAAATCCC
chr2	237731849	237731850	chr2:237731850:G:A	rs77168485	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	237731868	237731869	chr2:237731869:C:T	rs144341465	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	237886734	237886735	chr2:237886735:C:T	rs528091453	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr2	238122444	238122445	chr2:238122445:A:C	rs11902786	A	C	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	238289616	238289617	chr2:238289617:G:A	rs56005057	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr2	238289635	238289636	chr2:238289636:G:A	rs191374947	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr2	238289648	238289649	chr2:238289649:G:T	rs111384034	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr2	238441845	238441846	chr2:238441846:T:C	rs57080728	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr2	238644660	238644661	chr2:238644661:G:T	rs116078872	G	T	G	Hoxc9_MA0485.1	10	1	-	9.225859226354649	6.5418588924807	AGAAATAAATCTT
chr2	238655661	238655662	chr2:238655662:C:G	rs114567709	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr2	238684375	238684376	chr2:238684376:A:T	rs1014512087	A	T	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr2	238791495	238791496	chr2:238791496:A:G	rs535787105	A	G	a	Hoxc9_MA0485.1	8	1	+	8.587944475110364	1.6859859649754039	GGACATCAATCAA
chr2	238875686	238875687	chr2:238875687:T:C	rs143110833	T	C	T	Hoxc9_MA0485.1	5	1	+	11.750994348012817	7.265682985374334	TGCCATAAATCAG
chr2	238883895	238883896	chr2:238883896:C:T	rs36086021	C	T	C	Hoxc9_MA0485.1	0	1	-	8.686373207775278	8.153558074484277	GGCCATGAATTAC
chr2	238938736	238938737	chr2:238938737:C:T	rs67649492	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	238951626	238951627	chr2:238951627:A:G	rs28495430	A	G	A	Hoxc9_MA0485.1	11	1	+	8.054879057230975	3.642345658362605	AGCAGTGAATCAC
chr2	238974589	238974590	chr2:238974590:T:C	rs4260270	T	C	C	Hoxc9_MA0485.1	6	1	-	7.126149379080188	4.091943612570767	TGCCACAAATCTC
chr2	239191739	239191740	chr2:239191740:C:T	rs3791562	C	T	C	Hoxc9_MA0485.1	0	1	+	7.906863298750742	8.139206956270108	CGCAGTCAATCAT
chr2	239260043	239260044	chr2:239260044:C:G	rs71362000	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr2	239260047	239260048	chr2:239260048:C:T	rs890429974	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr2	239421274	239421275	chr2:239421275:C:A	rs912839208	C	A	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	239600662	239600663	chr2:239600663:C:T	rs10200488	C	T	G	Hoxc9_MA0485.1	4	1	-	7.988994636273454	9.15675835026504	TCCCGTCAATCAC
chr2	239600675	239600676	chr2:239600676:A:T	rs113479489	A	T	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr2	239600679	239600680	chr2:239600680:A:T	rs148388850	A	T	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr2	239600681	239600682	chr2:239600682:G:A	rs11124210	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr2	239623440	239623441	chr2:239623441:G:A	rs79204057	G	A	G	Hoxc9_MA0485.1	0	1	-	8.432359743151569	8.664703400670938	CGTCATCAATCAT
chr2	239846782	239846783	chr2:239846783:C:A	rs78242676	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr2	240419006	240419007	chr2:240419007:C:T	rs6746099	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr2	240521954	240521955	chr2:240521955:T:A	rs13394744	T	A	T	Hoxc9_MA0485.1	6	1	-	8.830925348954224	5.302200883416706	CACAATAAATCTT
chr2	240628329	240628330	chr2:240628330:T:A	rs34826997	T	A	t	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr2	240670644	240670645	chr2:240670645:C:T	rs77294644	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr2	240745242	240745243	chr2:240745243:T:C	rs1529665	T	C	C	Hoxc9_MA0485.1	9	1	+	8.03885726764081	1.1506314532671795	AGCTGTAAATCCA
chr2	241150882	241150883	chr2:241150883:C:T	rs141543700	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr2	241185128	241185129	chr2:241185129:C:T	rs28489289	C	T	C	Hoxc9_MA0485.1	0	1	-	9.351248630752357	8.818433497461355	GCCCATGAATCAC
chr2	241270992	241270993	chr2:241270993:A:G	rs4675816	A	G	G	Hoxc9_MA0485.1	5	1	-	7.828783822566254	3.343472459927769	GGCCATGAATTTC
chr2	241356105	241356106	chr2:241356106:A:C	rs2286279	A	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr2	241558101	241558102	chr2:241558102:T:A	rs76603784	T	A	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr2	241627177	241627178	chr2:241627178:T:C	rs76235535	T	C	T	Hoxc9_MA0485.1	8	1	-	8.50458699230768	1.6026284821727206	AGCAATGAATCAG
chr2	241643941	241643942	chr2:241643942:C:T	rs35807080	C	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr2	241643942	241643943	chr2:241643943:G:A	rs74976999	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr2	241695773	241695774	chr2:241695774:A:G	rs190225801	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr2	241810382	241810383	chr2:241810383:G:C	rs13415837	G	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	241910626	241910627	chr2:241910627:T:C	rs12993043	T	C	.	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr2	242043543	242043544	chr2:242043544:T:C	rs35023173	T	C	.	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	281469	281470	chr20:281470:C:T	rs66940550	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr20	366710	366711	chr20:366711:C:G	rs6037435	C	G	G	Hoxc9_MA0485.1	11	1	+	8.923233288449286	6.563689744479999	GACAATAAATCCT
chr20	651263	651264	chr20:651264:C:T	rs6076874	C	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	689006	689007	chr20:689007:A:G	rs7261818	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	766378	766379	chr20:766379:C:T	rs34571785	C	T	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr20	971392	971393	chr20:971393:G:A	rs79484959	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr20	1061318	1061319	chr20:1061319:G:A	rs4816186	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	1283303	1283304	chr20:1283304:C:G	rs7261624	C	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr20	1284373	1284374	chr20:1284374:T:C	rs6033312	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	1304904	1304905	chr20:1304905:G:A	rs35467629	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	1434007	1434008	chr20:1434008:C:T	rs2317652	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	1565210	1565211	chr20:1565211:C:T	rs16995228	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr20	1733448	1733449	chr20:1733449:A:T	rs202457	A	T	-	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	1761364	1761365	chr20:1761365:A:G	rs549075696	A	G	A	Hoxc9_MA0485.1	4	1	+	8.883900560146527	7.716136846154945	GGCTATGAATCAG
chr20	1786639	1786640	chr20:1786640:G:C	rs11697660	G	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr20	1786650	1786651	chr20:1786651:G:A	rs11087199	G	A	g	Hoxc9_MA0485.1	16	0	-	0	0	.
chr20	1825785	1825786	chr20:1825786:T:C	rs183891	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	1825798	1825799	chr20:1825799:C:G	rs145985725	C	G	G	Hoxc9_MA0485.1	1	1	-	7.825482225737683	6.686521744406009	CGTCATGAATCAC
chr20	2152251	2152252	chr20:2152252:T:C	rs927156	T	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	2178589	2178590	chr20:2178590:G:A	rs6113119	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr20	2218252	2218253	chr20:2218253:A:C	rs6047451	A	C	A	Hoxc9_MA0485.1	2	1	-	8.776927671670567	7.45806200711048	CTTCATAAATCAC
chr20	2252605	2252606	chr20:2252606:C:T	rs2064846	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr20	2252607	2252608	chr20:2252608:T:A	rs2064847	T	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	2290131	2290132	chr20:2290132:A:C	rs1368767283	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	2290137	2290138	chr20:2290138:G:A	rs6082631	G	A	G	Hoxc9_MA0485.1	12	1	-	8.832474737892808	8.578477784128255	CCTTATAAATCAC
chr20	2537178	2537179	chr20:2537179:T:C	rs6114817	T	C	C	Hoxc9_MA0485.1	9	1	+	7.788232603749086	0.9000067893754525	AGCCACAAATCAG
chr20	2572279	2572280	chr20:2572280:T:C	rs1883980	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	2701559	2701560	chr20:2701560:A:G	rs4141589	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	3138486	3138487	chr20:3138487:G:A	rs306757	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	3184713	3184714	chr20:3184714:A:G	rs11087569	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	3315392	3315393	chr20:3315393:T:C	rs2236114	T	C	T	Hoxc9_MA0485.1	4	1	-	7.973534707971797	6.8057709939802145	GGAAATAAATCCA
chr20	3658371	3658372	chr20:3658372:A:G	rs2670314	A	G	A	Hoxc9_MA0485.1	12	1	-	7.997434273505186	8.251431227269737	CTCAGTAAATCAT
chr20	3658394	3658395	chr20:3658395:T:C	rs619246	T	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr20	3930373	3930374	chr20:3930374:T:G	rs73084583	T	G	T	Hoxc9_MA0485.1	12	1	+	8.014508623477864	7.550449798327539	TCCTATCAATCAT
chr20	3980441	3980442	chr20:3980442:G:A	rs543293453	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr20	4057844	4057845	chr20:4057845:C:T	rs945767	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr20	4067202	4067203	chr20:4067203:C:T	rs60082299	C	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr20	4090363	4090364	chr20:4090364:C:T	rs35873660	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr20	4091287	4091288	chr20:4091288:C:T	rs34806699	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr20	4091292	4091293	chr20:4091293:A:G	rs34969280	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr20	4189509	4189510	chr20:4189510:C:T	rs6116250	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	4189539	4189540	chr20:4189540:A:G	rs1217356	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	4205384	4205385	chr20:4205385:C:T	rs1235695	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	4308418	4308419	chr20:4308419:C:G	rs8123338	C	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr20	4308423	4308424	chr20:4308424:T:C	rs8118540	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr20	4507592	4507593	chr20:4507593:C:T	rs1489427866	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr20	4602069	4602070	chr20:4602070:A:G	rs6052674	A	G	A	Hoxc9_MA0485.1	8	1	+	8.05816414320039	1.1562056330654296	AGCAGTCAATCTC
chr20	4637327	4637328	chr20:4637328:C:T	rs375212528	C	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	4930531	4930532	chr20:4930532:T:C	rs78729994	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	4972528	4972529	chr20:4972529:A:T	rs12481301	A	T	A	Hoxc9_MA0485.1	4	1	+	8.231910770609648	4.56329552829305	ACACATAAATCTA
chr20	5217862	5217863	chr20:5217863:G:C	rs1028551	G	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	5467304	5467305	chr20:5467305:C:A	rs76453344	C	A	C	Hoxc9_MA0485.1	6	1	+	7.348769528621772	9.522100823952753	CCCCATCAATCTG
chr20	5481495	5481496	chr20:5481496:T:G	rs6076842	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	5646043	5646044	chr20:5646044:T:A	rs73587695	T	A	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	5656906	5656907	chr20:5656907:T:C	rs16991149	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr20	5818761	5818762	chr20:5818762:C:T	rs1294704	C	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr20	5836166	5836167	chr20:5836167:T:C	rs142007137	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	5841711	5841712	chr20:5841712:T:A	rs237090	T	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr20	5841721	5841722	chr20:5841722:T:G	rs237089	T	G	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr20	5993618	5993619	chr20:5993619:A:G	rs16991638	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr20	6134933	6134934	chr20:6134934:C:T	rs6053929	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	6274693	6274694	chr20:6274694:A:G	rs3852947	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	6310667	6310668	chr20:6310668:A:G	rs2326746	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr20	6705319	6705320	chr20:6705320:G:A	rs147978545	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	6709854	6709855	chr20:6709855:T:A	rs1015151	T	A	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	6829905	6829906	chr20:6829906:T:C	rs77488608	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	7272852	7272853	chr20:7272853:C:T	rs6117734	C	T	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	7791756	7791757	chr20:7791757:C:G	rs6086215	C	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	7828431	7828432	chr20:7828432:G:A	rs116551308	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	7836059	7836060	chr20:7836060:T:C	rs2423289	T	C	T	Hoxc9_MA0485.1	11	1	-	9.318851250093477	4.906317851225109	AGCAATAAATAAT
chr20	7899131	7899132	chr20:7899132:T:C	rs146548405	T	C	T	Hoxc9_MA0485.1	3	1	-	8.054879057230975	3.273233792815751	AGCAGTGAATCAC
chr20	8309695	8309696	chr20:8309696:G:A	rs148887226	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr20	8309704	8309705	chr20:8309705:T:G	rs182327110	T	G	T	Hoxc9_MA0485.1	8	1	-	8.225405070022054	3.3750028980773954	AGCTATGAATCAA
chr20	8522257	8522258	chr20:8522258:C:T	rs59084416	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	8671412	8671413	chr20:8671413:A:T	rs6077404	A	T	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	8764838	8764839	chr20:8764839:G:A	rs761043	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	9036800	9036801	chr20:9036801:A:T	rs6108238	A	T	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr20	9039191	9039192	chr20:9039192:G:C	rs144577528	G	C	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	9072908	9072909	chr20:9072909:C:G	rs724089	C	G	G	Hoxc9_MA0485.1	11	1	+	8.708285915542264	6.348742371572977	GGACATAAATCCA
chr20	9100747	9100748	chr20:9100748:G:A	rs6056403	G	A	G	Hoxc9_MA0485.1	10	1	-	7.711150190317075	5.907314286008323	AGCAATAAAACAG
chr20	9329970	9329971	chr20:9329971:G:C	chr20:9329971:G:C	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr20	9333293	9333294	chr20:9333294:T:C	rs8115510	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	9408554	9408555	chr20:9408555:T:C	rs924891878	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr20	9594386	9594387	chr20:9594387:G:A	rs6086949	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	9594770	9594771	chr20:9594771:T:A	rs181431535	T	A	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr20	9709458	9709459	chr20:9709459:G:A	rs2423429	G	A	G	Hoxc9_MA0485.1	3	1	-	8.540769097146525	7.652516324123902	AACCATCAATCAG
chr20	9903258	9903259	chr20:9903259:T:C	rs74438588	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr20	9903261	9903262	chr20:9903262:C:T	rs77577762	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr20	9903298	9903299	chr20:9903299:G:T	rs6056996	G	T	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	9927984	9927985	chr20:9927985:A:C	rs4816189	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	10171877	10171878	chr20:10171878:A:G	rs10485738	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr20	10171912	10171913	chr20:10171913:A:T	rs551445219	A	T	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr20	10219516	10219517	chr20:10219517:C:T	rs145163809	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	10327421	10327422	chr20:10327422:A:C	rs6039854	A	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	10352533	10352534	chr20:10352534:C:A	rs956841122	C	A	C	Hoxc9_MA0485.1	2	1	+	10.09184712253989	8.172444150136137	AGCTGTAAATCAA
chr20	10352536	10352537	chr20:10352537:T:C	rs2423490	T	C	T	Hoxc9_MA0485.1	5	1	+	10.09184712253989	5.606535759901408	AGCTGTAAATCAA
chr20	10375375	10375376	chr20:10375376:G:A	rs2206658	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr20	10434470	10434471	chr20:10434471:G:A	rs181633850	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	10434476	10434477	chr20:10434477:G:T	rs534633745	G	T	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	10548161	10548162	chr20:10548162:T:C	rs592429	T	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr20	10619787	10619788	chr20:10619788:A:C	rs1232598	A	C	c	Hoxc9_MA0485.1	24	0	+	0	0	.
chr20	10795582	10795583	chr20:10795583:G:T	rs563495256	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr20	10902778	10902779	chr20:10902779:A:G	rs1114344	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	10902836	10902837	chr20:10902837:A:G	rs6074197	A	G	A	Hoxc9_MA0485.1	3	1	+	8.360730575655307	3.579085311240085	TCTAATAAATCTC
chr20	10985349	10985350	chr20:10985350:G:A	rs1887320	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	11002241	11002242	chr20:11002242:C:T	rs193283896	C	T	C	Hoxc9_MA0485.1	12	1	-	10.122358765804622	9.996678408971151	GGCCATAAATAAG
chr20	11119186	11119187	chr20:11119187:C:T	rs1027458897	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr20	11144319	11144320	chr20:11144320:T:A	rs150188095	T	A	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	11157580	11157581	chr20:11157581:A:G	rs6108847	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr20	11179424	11179425	chr20:11179425:G:A	rs78353766	G	A	G	Hoxc9_MA0485.1	2	1	-	10.15394614883179	8.776927671670567	CTCCATAAATCAC
chr20	11270420	11270421	chr20:11270421:G:A	rs12625317	G	A	G	Hoxc9_MA0485.1	0	1	-	8.160791621677967	8.393135279197336	CGAAGTAAATCAT
chr20	11529231	11529232	chr20:11529232:C:T	rs2423561	C	T	T	Hoxc9_MA0485.1	10	1	+	8.189663485175203	6.38582758086645	CCCAATCAATCAC
chr20	11581292	11581293	chr20:11581293:G:T	rs149090304	G	T	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr20	11716430	11716431	chr20:11716431:A:C	rs8115792	A	C	A	Hoxc9_MA0485.1	12	1	+	8.80780246303234	9.65153859878069	TTCAATAAATCAA
chr20	11741111	11741112	chr20:11741112:T:G	rs76524323	T	G	T	Hoxc9_MA0485.1	9	1	+	8.70647771374907	1.8182518993754395	GGCAGTAAATTTT
chr20	11776104	11776105	chr20:11776105:C:T	rs2670439	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	11881550	11881551	chr20:11881551:G:A	rs6033245	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr20	11943971	11943972	chr20:11943972:A:C	rs6109198	A	C	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr20	12013583	12013584	chr20:12013584:C:T	rs6033272	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr20	12014439	12014440	chr20:12014440:A:G	rs6033273	A	G	A	Hoxc9_MA0485.1	4	1	+	8.64280006626657	7.475036352274988	TGCTATAAATAAT
chr20	12068381	12068382	chr20:12068382:G:A	rs75109704	G	A	.	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	12414487	12414488	chr20:12414488:C:G	rs2208974	C	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	12591219	12591220	chr20:12591220:T:A	rs73088380	T	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	12661431	12661432	chr20:12661432:A:G	rs12624971	A	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr20	12763550	12763551	chr20:12763551:A:C	rs845587	A	C	C	Hoxc9_MA0485.1	7	1	+	7.997434273505186	1.0932052042996063	CTCAGTAAATCAT
chr20	12775144	12775145	chr20:12775145:T:G	chr20:12775145:T:G	T	G	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr20	12775147	12775148	chr20:12775148:A:G	rs6109554	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	12825401	12825402	chr20:12825402:C:T	rs116408120	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr20	13105055	13105056	chr20:13105056:G:A	rs16993768	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	13202727	13202728	chr20:13202728:T:C	rs11907581	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr20	13430622	13430623	chr20:13430623:A:G	rs927122	A	G	a	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr20	13430661	13430662	chr20:13430662:C:T	rs34988299	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr20	13459103	13459104	chr20:13459104:G:A	rs138672952	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr20	14223886	14223887	chr20:14223887:T:C	rs6079355	T	C	t	Hoxc9_MA0485.1	4	1	-	7.416212337182636	6.248448623191053	AGCCATCAATAAG
chr20	14235782	14235783	chr20:14235783:C:T	rs76753847	C	T	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr20	14400335	14400336	chr20:14400336:A:G	rs35346025	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	14440732	14440733	chr20:14440733:C:T	rs915074	C	T	C	Hoxc9_MA0485.1	1	1	-	7.7684882319715145	6.209044658061455	TGCCATAAATTCA
chr20	14489312	14489313	chr20:14489313:G:A	rs12624575	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr20	14559683	14559684	chr20:14559684:C:T	rs6105292	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr20	14929266	14929267	chr20:14929267:C:T	rs241205	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	14956861	14956862	chr20:14956862:A:G	rs75217497	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr20	15027083	15027084	chr20:15027084:G:A	rs6135329	G	A	A	Hoxc9_MA0485.1	3	1	-	8.757859923094513	7.8696071500718885	CAACATAAATCAC
chr20	15034539	15034540	chr20:15034540:A:C	rs1016498	A	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	15251478	15251479	chr20:15251479:A:C	rs4814350	A	C	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	15257225	15257226	chr20:15257226:G:A	rs4813174	G	A	A	Hoxc9_MA0485.1	10	1	-	9.831591375609062	8.02775547130031	TGACATAAATCAG
chr20	15257248	15257249	chr20:15257249:G:T	rs4813175	G	T	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr20	15420085	15420086	chr20:15420086:G:A	rs927920	G	A	A	Hoxc9_MA0485.1	10	1	-	8.599593112238876	6.795757207930126	TACTGTAAATCAT
chr20	15653458	15653459	chr20:15653459:T:C	rs458236	T	C	T	Hoxc9_MA0485.1	9	1	+	7.0957558676310954	0.20753005325746215	GAGCATCAATCAC
chr20	15664021	15664022	chr20:15664022:G:A	rs455709	G	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	15983645	15983646	chr20:15983646:C:T	rs11699026	C	T	c	Hoxc9_MA0485.1	1	1	-	10.625833106806203	9.066389532896142	AGTAATAAATCAT
chr20	16019020	16019021	chr20:16019021:A:G	rs6135641	A	G	a	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	16078759	16078760	chr20:16078760:T:C	rs4814427	T	C	t	Hoxc9_MA0485.1	14	0	+	0	0	.
chr20	16306200	16306201	chr20:16306201:C:T	rs6080217	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	16315058	16315059	chr20:16315059:G:A	rs12480966	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr20	16484112	16484113	chr20:16484113:A:G	rs6034498	A	G	a	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	16527415	16527416	chr20:16527416:T:C	rs6135786	T	C	C	Hoxc9_MA0485.1	5	1	+	10.344027705245347	5.858716342606864	AGCCATAAATTAA
chr20	16689988	16689989	chr20:16689989:C:G	rs6044237	C	G	G	Hoxc9_MA0485.1	1	1	-	9.127699083476132	7.988738602144459	CGTTATAAATCAA
chr20	16807091	16807092	chr20:16807092:C:T	rs6044365	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr20	16944937	16944938	chr20:16944938:T:A	chr20:16944938:T:A	T	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	17889052	17889053	chr20:17889053:C:T	rs370203811	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr20	17889384	17889385	chr20:17889385:C:T	rs6111723	C	T	T	Hoxc9_MA0485.1	1	1	-	8.751219904343984	7.191776330433922	GGTAATAAATTTC
chr20	18265490	18265491	chr20:18265491:T:A	rs2843439	T	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	18372449	18372450	chr20:18372450:G:A	rs79384128	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	18465718	18465719	chr20:18465719:G:A	rs77761575	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	18611725	18611726	chr20:18611726:C:G	rs6081243	C	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr20	18628669	18628670	chr20:18628670:T:C	rs2295573	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	18679512	18679513	chr20:18679513:A:G	rs17736093	A	G	A	Hoxc9_MA0485.1	12	1	-	8.790986564779843	9.044983518544395	ACATATAAATCAT
chr20	18830671	18830672	chr20:18830672:A:T	rs6136531	A	T	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	18904362	18904363	chr20:18904363:C:T	rs910129	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr20	19115980	19115981	chr20:19115981:A:G	rs6045837	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	19429723	19429724	chr20:19429724:C:T	rs73288770	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	19436425	19436426	chr20:19436426:T:C	rs6081598	T	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	19454135	19454136	chr20:19454136:T:G	rs1023220380	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr20	19548111	19548112	chr20:19548112:C:G	rs3827991	C	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr20	19655678	19655679	chr20:19655679:G:T	rs6035402	G	T	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	19812157	19812158	chr20:19812158:A:G	rs6046335	A	G	A	Hoxc9_MA0485.1	8	1	+	9.949781922979298	3.047823412844338	TGTTATAAATCAT
chr20	19812166	19812167	chr20:19812167:T:C	rs6046336	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	19820857	19820858	chr20:19820858:A:C	rs7261512	A	C	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr20	19891080	19891081	chr20:19891081:T:C	rs6046425	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr20	19936009	19936010	chr20:19936010:G:T	rs13042178	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr20	19952543	19952544	chr20:19952544:G:A	rs1876813	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	19977490	19977491	chr20:19977491:C:T	rs529757167	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	19986096	19986097	chr20:19986097:T:C	rs35918302	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr20	19986109	19986110	chr20:19986110:T:C	rs6046517	T	C	T	Hoxc9_MA0485.1	8	1	-	8.149235264126048	1.2472767539910867	TCTCATAAATTAC
chr20	20198595	20198596	chr20:20198596:T:C	rs1040583	T	C	C	Hoxc9_MA0485.1	11	1	+	10.72320796869605	9.527807499005991	TGCTATAAATCTC
chr20	20747961	20747962	chr20:20747962:C:T	rs150787919	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr20	21075252	21075253	chr20:21075253:A:T	rs6075764	A	T	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	21302253	21302254	chr20:21302254:G:A	rs868412440	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	21353012	21353013	chr20:21353013:G:C	rs6082393	G	C	C	Hoxc9_MA0485.1	12	1	-	10.453012633423226	9.734956854508347	AGCAATAAATTAC
chr20	21353029	21353030	chr20:21353030:G:A	rs6075794	G	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	22404315	22404316	chr20:22404316:T:C	rs118137201	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr20	22404318	22404319	chr20:22404319:G:A	rs141419511	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	22404320	22404321	chr20:22404321:G:A	rs147473788	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	22447440	22447441	chr20:22447441:G:T	rs7274111	G	T	T	Hoxc9_MA0485.1	11	1	-	8.246414976330655	10.299404831229737	GTCTATAAATCCT
chr20	22449711	22449712	chr20:22449712:T:C	rs6036116	T	C	T	Hoxc9_MA0485.1	2	1	-	9.310817124709166	8.53433595539161	GAAAATAAATCAC
chr20	23028806	23028807	chr20:23028807:G:A	rs220990	G	A	A	Hoxc9_MA0485.1	2	1	-	8.154107036835592	6.777088559674369	CTCTATAAATCTT
chr20	23098976	23098977	chr20:23098977:G:T	rs116809495	G	T	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	23390601	23390602	chr20:23390602:C:A	rs75913957	C	A	C	Hoxc9_MA0485.1	12	1	+	7.470974284467853	6.627238148719505	GGCCATATATCTC
chr20	23668515	23668516	chr20:23668516:C:A	rs76917076	C	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr20	23668539	23668540	chr20:23668540:G:A	rs115969899	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	23668556	23668557	chr20:23668557:C:G	rs1036867960	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr20	23759509	23759510	chr20:23759510:A:G	rs4611705	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	23759523	23759524	chr20:23759524:G:A	rs4419289	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	23814085	23814086	chr20:23814086:G:A	rs145925349	G	A	g	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	23996798	23996799	chr20:23996799:T:A	rs3843774	T	A	a	Hoxc9_MA0485.1	16	0	+	0	0	.
chr20	24158522	24158523	chr20:24158523:A:G	rs7354351	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr20	24364246	24364247	chr20:24364247:T:G	rs1474735	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr20	24382665	24382666	chr20:24382666:G:T	rs60071381	G	T	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	24694906	24694907	chr20:24694907:C:T	rs188366406	C	T	C	Hoxc9_MA0485.1	2	1	+	7.7684882319715145	6.3914697548102914	TGCCATAAATTCA
chr20	24837740	24837741	chr20:24837741:A:C	chr20:24837741:A:C	A	C	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	24918219	24918220	chr20:24918220:G:A	rs885402	G	A	A	Hoxc9_MA0485.1	12	1	-	8.87371083207853	8.619713878313977	GCAAATAAATCTC
chr20	25197168	25197169	chr20:25197169:T:C	rs2268879	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr20	25246262	25246263	chr20:25246263:C:T	rs74173671	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr20	25259452	25259453	chr20:25259453:G:A	rs60043588	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	25692772	25692773	chr20:25692773:A:G	rs6050793	A	G	A	Hoxc9_MA0485.1	4	1	+	8.595996373176675	7.428232659185093	ACCAATAAATTAG
chr20	25851547	25851548	chr20:25851548:A:G	rs6050929	A	G	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr20	26277550	26277551	chr20:26277551:C:T	rs34719002	C	T	.	Hoxc9_MA0485.1	24	0	+	0	0	.
chr20	28782621	28782622	chr20:28782622:T:G	rs1394293738	T	G	.	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	29321020	29321021	chr20:29321021:G:A	rs879048798	G	A	.	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	30220122	30220123	chr20:30220123:C:T	rs80234983	C	T	.	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	30300106	30300107	chr20:30300107:T:C	rs6567440	T	C	.	Hoxc9_MA0485.1	1	1	-	8.401235490852383	9.960679064762441	AACCATCAATCTC
chr20	30506478	30506479	chr20:30506479:G:C	rs1236184288	G	C	.	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr20	30851681	30851682	chr20:30851682:G:A	rs1349452964	G	A	.	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr20	31272494	31272495	chr20:31272495:A:G	rs1884743	A	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr20	31814489	31814490	chr20:31814490:C:T	rs555540708	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	32063766	32063767	chr20:32063767:A:T	rs6089158	A	T	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr20	32070773	32070774	chr20:32070774:G:A	rs7354349	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	32142434	32142435	chr20:32142435:G:A	rs6061184	G	A	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	32334258	32334259	chr20:32334259:G:A	rs73241234	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr20	32460578	32460579	chr20:32460579:G:A	rs1555133	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	32465670	32465671	chr20:32465671:G:A	rs73246588	G	A	G	Hoxc9_MA0485.1	3	1	-	6.641779553811099	5.753526780788474	CCCCGTGAATCAT
chr20	32629150	32629151	chr20:32629151:T:A	rs4911250	T	A	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr20	32743843	32743844	chr20:32743844:T:G	chr20:32743844:T:G	T	G	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	32743858	32743859	chr20:32743859:T:A	rs79040027	T	A	T	Hoxc9_MA0485.1	8	1	-	8.927460407844725	2.0255018977097663	TGCCATAAATATC
chr20	32779272	32779273	chr20:32779273:G:T	rs1569686	G	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr20	32779304	32779305	chr20:32779305:C:T	rs10485500	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr20	32914525	32914526	chr20:32914526:A:C	rs6119304	A	C	G	Hoxc9_MA0485.1	0	1	-	9.034198791693168	10.08956354335892	TGTCATAAATTAT
chr20	33102547	33102548	chr20:33102548:G:A	rs2070328	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	33647627	33647628	chr20:33647628:G:C	rs957188792	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr20	33896722	33896723	chr20:33896723:G:A	rs2092476	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr20	33896735	33896736	chr20:33896736:G:T	rs114040037	G	T	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	33928109	33928110	chr20:33928110:G:C	rs17091405	G	C	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr20	34164686	34164687	chr20:34164687:G:T	rs6120546	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr20	34257229	34257230	chr20:34257230:T:C	rs6059742	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr20	34601230	34601231	chr20:34601231:G:A	rs75345986	G	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr20	34971447	34971448	chr20:34971448:T:C	rs17092195	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	35117904	35117905	chr20:35117905:G:C	rs6142300	G	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr20	35272037	35272038	chr20:35272038:A:G	rs116233827	A	G	A	Hoxc9_MA0485.1	12	1	-	8.01308369266214	8.267080646426692	TGCCGTGAATCAT
chr20	35422287	35422288	chr20:35422288:C:T	rs224319	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	35700931	35700932	chr20:35700932:C:T	rs3088078	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr20	35832100	35832101	chr20:35832101:A:T	rs6088943	A	T	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr20	35991474	35991475	chr20:35991475:T:C	rs2050930	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	36139050	36139051	chr20:36139051:C:A	rs75653149	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr20	36569975	36569976	chr20:36569976:T:G	chr20:36569976:T:G	T	G	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	36832996	36832997	chr20:36832997:C:A	rs151063925	C	A	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	37201897	37201898	chr20:37201898:G:A	rs80007157	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	37381685	37381686	chr20:37381686:C:T	rs3762205	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr20	37524636	37524637	chr20:37524637:G:A	rs145718145	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	37544323	37544324	chr20:37544324:C:A	rs910594	C	A	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr20	37635372	37635373	chr20:37635373:A:T	rs73107564	A	T	.	Hoxc9_MA0485.1	27	0	-	0	0	.
chr20	37857660	37857661	chr20:37857661:T:C	rs4811231	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr20	37864524	37864525	chr20:37864525:C:T	rs6063714	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr20	37868025	37868026	chr20:37868026:G:C	rs909769	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr20	37953042	37953043	chr20:37953043:C:T	rs73296474	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	38269855	38269856	chr20:38269856:G:A	rs78640658	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr20	38293724	38293725	chr20:38293725:G:T	rs141325858	G	T	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	38386274	38386275	chr20:38386275:A:G	rs2864143	A	G	A	Hoxc9_MA0485.1	4	1	+	10.330068219043337	9.162304505051754	GTCCATAAATCTT
chr20	38428774	38428775	chr20:38428775:C:T	rs41282826	C	T	C	Hoxc9_MA0485.1	3	1	+	9.248296558037032	8.360043785014408	TGCCGTAAATCCC
chr20	38699224	38699225	chr20:38699225:G:T	rs6015679	G	T	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	38763545	38763546	chr20:38763546:A:G	rs2244797	A	G	a	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	39401835	39401836	chr20:39401836:G:A	rs4474942	G	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr20	39429738	39429739	chr20:39429739:A:G	rs6101527	A	G	A	Hoxc9_MA0485.1	8	1	+	7.877918744185903	0.9759602340509439	ATCCATCAATCTC
chr20	39432725	39432726	chr20:39432726:T:G	rs8122510	T	G	G	Hoxc9_MA0485.1	7	1	-	8.333697236757425	1.4294681675518466	GGCAGTGAATCAT
chr20	39619637	39619638	chr20:39619638:T:C	rs2093264	T	C	T	Hoxc9_MA0485.1	4	1	-	7.809543267802682	6.641779553811099	CCCCATGAATCAT
chr20	39630854	39630855	chr20:39630855:A:G	rs6028567	A	G	A	Hoxc9_MA0485.1	3	1	-	8.749565880685537	9.63781865370816	GTCTATAAATTAC
chr20	39881085	39881086	chr20:39881086:G:T	rs564888656	G	T	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr20	39982232	39982233	chr20:39982233:C:T	rs17230825	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	40737972	40737973	chr20:40737973:T:C	rs2425445	T	C	T	Hoxc9_MA0485.1	6	1	-	8.408103990600145	5.3738982240907225	CTCTATAAATCTC
chr20	40739656	40739657	chr20:40739657:T:G	rs3091920	T	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr20	40913785	40913786	chr20:40913786:G:A	rs11699669	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	40986554	40986555	chr20:40986555:C:T	rs6124296	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	41048073	41048074	chr20:41048074:A:T	rs79507025	A	T	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr20	41089826	41089827	chr20:41089827:C:A	rs115746652	C	A	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr20	41089840	41089841	chr20:41089841:T:C	rs73259882	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	41149920	41149921	chr20:41149921:C:G	rs767169450	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr20	41470698	41470699	chr20:41470699:C:T	rs6029697	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr20	41470729	41470730	chr20:41470730:C:T	rs6029698	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr20	41650574	41650575	chr20:41650575:G:T	chr20:41650575:G:T	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr20	41693909	41693910	chr20:41693910:G:A	rs141412738	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr20	41701722	41701723	chr20:41701723:T:C	rs2866705	T	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	41727707	41727708	chr20:41727708:C:G	rs111959700	C	G	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr20	41733383	41733384	chr20:41733384:T:C	rs112693261	T	C	T	Hoxc9_MA0485.1	3	1	+	9.441815446020714	10.330068219043337	GTCTATAAATCTT
chr20	42082745	42082746	chr20:42082746:A:C	rs3787279	A	C	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr20	42572803	42572804	chr20:42572804:A:C	rs62203789	A	C	A	Hoxc9_MA0485.1	0	1	+	8.1752090154674	7.420315739573282	AGCAATAAAACAT
chr20	43146229	43146230	chr20:43146230:C:T	rs6030669	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	43241196	43241197	chr20:43241197:T:C	rs35869119	T	C	T	Hoxc9_MA0485.1	1	1	+	9.419194941261322	10.362994780506186	CTCAATAAATCAC
chr20	43343820	43343821	chr20:43343821:C:G	rs2205775	C	G	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr20	43376982	43376983	chr20:43376983:T:C	rs16988004	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	43409459	43409460	chr20:43409460:C:T	rs541353471	C	T	C	Hoxc9_MA0485.1	1	1	-	8.471460949289542	6.91201737537948	TGTAGTAAATCAG
chr20	43449315	43449316	chr20:43449316:C:T	rs75046126	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr20	43541213	43541214	chr20:43541214:A:G	rs117851581	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr20	44018598	44018599	chr20:44018599:C:T	rs116603077	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr20	44102162	44102163	chr20:44102163:C:T	rs6031384	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr20	44120250	44120251	chr20:44120251:G:C	rs6031403	G	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	44122394	44122395	chr20:44122395:T:C	rs2038168	T	C	C	Hoxc9_MA0485.1	4	1	-	8.182323744794328	7.014560030802746	CCCCATAAATTTT
chr20	44152803	44152804	chr20:44152804:A:G	rs2425626	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	44177456	44177457	chr20:44177457:A:G	rs41279276	A	G	A	Hoxc9_MA0485.1	4	1	+	7.431845658348599	6.264081944357016	GCACATGAATCAC
chr20	44188279	44188280	chr20:44188280:C:T	rs114065208	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	44208800	44208801	chr20:44208801:T:C	rs956609	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	44298317	44298318	chr20:44298318:A:G	rs11086922	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	44442708	44442709	chr20:44442709:C:T	rs58438406	C	T	C	Hoxc9_MA0485.1	10	1	+	8.585185971119849	6.781350066811098	GGCCATAAAACTT
chr20	44738620	44738621	chr20:44738621:G:A	rs114684795	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	45018003	45018004	chr20:45018004:T:C	rs2267859	T	C	C	Hoxc9_MA0485.1	0	1	-	9.196013072454924	9.728828205745925	AGCCATAAATATT
chr20	45036348	45036349	chr20:45036349:G:A	rs1073256	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	45245822	45245823	chr20:45245823:C:T	rs59989008	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr20	45245827	45245828	chr20:45245828:C:T	rs56346511	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr20	45323167	45323168	chr20:45323168:G:A	rs80315306	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr20	45323173	45323174	chr20:45323174:C:T	rs142341641	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	45323206	45323207	chr20:45323207:G:A	rs62205540	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	45324236	45324237	chr20:45324237:A:G	rs6073708	A	G	G	Hoxc9_MA0485.1	5	1	-	7.621191773906606	3.1358804112681202	GGTCTTAAATCTC
chr20	45345096	45345097	chr20:45345097:G:T	rs2743389	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr20	45348973	45348974	chr20:45348974:A:G	rs1005283	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr20	45360188	45360189	chr20:45360189:G:A	rs747170188	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	45489279	45489280	chr20:45489280:G:C	rs112390434	G	C	g	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	45489324	45489325	chr20:45489325:A:G	rs73303898	A	G	a	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr20	45601652	45601653	chr20:45601653:C:A	rs2206449	C	A	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr20	45781475	45781476	chr20:45781476:G:A	rs181867278	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	45976182	45976183	chr20:45976183:G:A	rs7275164	G	A	G	Hoxc9_MA0485.1	3	1	-	7.646342214958262	6.758089441935637	CACCATCAATCTC
chr20	46092886	46092887	chr20:46092887:C:A	rs4410345	C	A	A	Hoxc9_MA0485.1	6	1	+	8.295879719600515	10.469211014931497	TGCTATCAATCTT
chr20	46092900	46092901	chr20:46092901:C:T	rs4812991	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr20	46268419	46268420	chr20:46268420:G:A	rs2425821	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	46268439	46268440	chr20:46268440:G:A	rs138398780	G	A	G	Hoxc9_MA0485.1	1	1	+	8.530355643537526	6.970912069627462	CGCAGTAAATTAC
chr20	46357124	46357125	chr20:46357125:G:T	rs10211808	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	46395269	46395270	chr20:46395270:T:A	rs117603538	T	A	T	Hoxc9_MA0485.1	9	1	+	9.056820170944613	5.2291776024445875	GAAAATAAATCAT
chr20	46583980	46583981	chr20:46583981:T:C	rs863675	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	46802823	46802824	chr20:46802824:G:A	rs116323576	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	46802825	46802826	chr20:46802826:A:G	rs947079	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	46850580	46850581	chr20:46850581:T:G	rs77331270	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	46870450	46870451	chr20:46870451:A:G	rs6124879	A	G	G	Hoxc9_MA0485.1	4	1	+	11.792425969822476	10.624662255830893	GGCTATAAATCAA
chr20	47274692	47274693	chr20:47274693:A:G	rs3810525	A	G	G	Hoxc9_MA0485.1	0	1	+	8.351085426855525	8.883900560146527	AGCTATGAATCAG
chr20	47274717	47274718	chr20:47274718:A:C	rs188712057	A	C	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr20	47479396	47479397	chr20:47479397:A:G	rs6094716	A	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr20	47599922	47599923	chr20:47599923:G:A	rs2143491	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	47621392	47621393	chr20:47621393:C:T	rs6066416	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr20	47817669	47817670	chr20:47817670:G:A	rs34015982	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	47857524	47857525	chr20:47857525:G:A	rs1540316	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr20	47857536	47857537	chr20:47857537:C:G	chr20:47857537:C:G	C	G	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	47861069	47861070	chr20:47861070:G:C	rs6066510	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	47944949	47944950	chr20:47944950:G:A	rs8115182	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr20	48149860	48149861	chr20:48149861:C:A	rs6066646	C	A	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	48163492	48163493	chr20:48163493:T:C	rs827941	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	48262498	48262499	chr20:48262499:T:C	rs226810	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr20	48269628	48269629	chr20:48269629:C:A	rs17427380	C	A	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr20	48371302	48371303	chr20:48371303:G:A	rs114318441	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr20	48485981	48485982	chr20:48485982:C:G	rs1407993477	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	48614175	48614176	chr20:48614176:C:A	rs140529740	C	A	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	48633052	48633053	chr20:48633053:T:C	rs4810846	T	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	48846160	48846161	chr20:48846161:C:G	rs71351945	C	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr20	49038026	49038027	chr20:49038027:C:G	rs927160	C	G	C	Hoxc9_MA0485.1	6	1	-	7.930180724438729	8.791055195617169	ACCTATGAATCAC
chr20	49392907	49392908	chr20:49392908:A:G	rs6019794	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr20	49392922	49392923	chr20:49392923:A:T	rs6019795	A	T	A	Hoxc9_MA0485.1	9	1	-	9.316498831946419	5.488856263446392	ATCAATAAATCTC
chr20	49451268	49451269	chr20:49451269:T:C	rs28414856	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr20	49542367	49542368	chr20:49542368:C:G	rs6012689	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr20	49699489	49699490	chr20:49699490:C:T	rs4810976	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	49709217	49709218	chr20:49709218:G:A	rs1927781	G	A	G	Hoxc9_MA0485.1	12	1	+	8.745340288643398	8.619659931809927	GGTCATAAATAAG
chr20	49718981	49718982	chr20:49718982:C:A	rs35854666	C	A	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr20	49978959	49978960	chr20:49978960:G:A	rs73113636	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr20	50034053	50034054	chr20:50034054:G:A	rs1329551860	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr20	50423207	50423208	chr20:50423208:C:T	rs112002358	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	50423228	50423229	chr20:50423229:A:G	rs532011573	A	G	A	Hoxc9_MA0485.1	5	1	-	8.522930717906014	4.037619355267528	CTTCATAAATCAT
chr20	50427883	50427884	chr20:50427884:G:A	rs1038568585	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr20	50436416	50436417	chr20:50436417:T:C	rs56069109	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr20	50541786	50541787	chr20:50541787:T:C	rs112213217	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	50546821	50546822	chr20:50546822:G:A	rs141749623	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr20	50716543	50716544	chr20:50716544:T:C	rs6512665	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	50802227	50802228	chr20:50802228:C:T	rs76487450	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr20	50804509	50804510	chr20:50804510:G:A	rs78309623	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr20	50877521	50877522	chr20:50877522:C:T	rs6091232	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	50900457	50900458	chr20:50900458:C:T	rs6091236	C	T	T	Hoxc9_MA0485.1	0	1	+	7.496689648520172	7.729033306039539	CGCTGTAAATAAC
chr20	50914020	50914021	chr20:50914021:T:C	rs112000943	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr20	50929653	50929654	chr20:50929654:A:G	rs1244567279	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr20	50978590	50978591	chr20:50978591:C:T	rs73132439	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr20	51105440	51105441	chr20:51105441:G:C	rs8122161	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	51123322	51123323	chr20:51123323:G:A	rs230014	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr20	51136178	51136179	chr20:51136179:T:C	rs230026	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr20	51183740	51183741	chr20:51183741:C:A	rs2426275	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	51306761	51306762	chr20:51306762:G:C	rs16995893	G	C	G	Hoxc9_MA0485.1	12	1	+	7.773823920357509	8.491879699272387	AGGCATAAATTAG
chr20	51306771	51306772	chr20:51306772:C:T	rs1418518762	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr20	51423548	51423549	chr20:51423549:A:G	rs6067766	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	51457434	51457435	chr20:51457435:G:T	rs534114618	G	T	G	Hoxc9_MA0485.1	0	1	+	8.434192625069823	7.3788278734040675	GGCTGTGAATCAC
chr20	51488326	51488327	chr20:51488327:C:T	rs11086340	C	T	T	Hoxc9_MA0485.1	2	1	+	9.232068563493844	7.8550500863326205	ACCAGTAAATCAG
chr20	51584352	51584353	chr20:51584353:T:A	rs6067832	T	A	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr20	51630290	51630291	chr20:51630291:T:C	rs2426319	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	51631642	51631643	chr20:51631643:G:A	chr20:51631643:G:A	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	51650746	51650747	chr20:51650747:C:T	rs76253787	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr20	51673507	51673508	chr20:51673508:G:A	rs6096523	G	A	-	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	51681726	51681727	chr20:51681727:C:T	rs13038547	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr20	51811082	51811083	chr20:51811083:C:G	rs532970066	C	G	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr20	51867327	51867328	chr20:51867328:C:T	rs138889723	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr20	51960592	51960593	chr20:51960593:C:T	rs1122391	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr20	52068440	52068441	chr20:52068441:A:G	rs6068063	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	52427107	52427108	chr20:52427108:C:T	rs4811352	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr20	52748352	52748353	chr20:52748353:C:T	rs73910942	C	T	C	Hoxc9_MA0485.1	3	1	+	8.994299604272479	8.106046831249857	TGCCGTAAATCCT
chr20	52788088	52788089	chr20:52788089:C:T	rs6068345	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr20	52938301	52938302	chr20:52938302:T:C	rs78596521	T	C	T	Hoxc9_MA0485.1	4	1	-	9.044756133177573	7.87699241918599	CCCCATAAATCCC
chr20	53023989	53023990	chr20:53023990:C:G	rs144664219	C	G	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr20	53098313	53098314	chr20:53098314:T:C	rs2801002	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	53131238	53131239	chr20:53131239:G:T	rs73914920	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr20	53370771	53370772	chr20:53370772:A:G	rs6091666	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr20	53489102	53489103	chr20:53489103:A:G	rs762374800	A	G	A	Hoxc9_MA0485.1	8	1	+	8.000756921824458	1.0987984116894964	ATCAATCAATCAC
chr20	53606336	53606337	chr20:53606337:T:C	rs73143915	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr20	53622059	53622060	chr20:53622060:C:T	rs6013738	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	53789587	53789588	chr20:53789588:T:A	rs6013797	T	A	T	Hoxc9_MA0485.1	0	1	+	8.377426004310898	8.89997562268565	TCTCATAAATCTG
chr20	53806016	53806017	chr20:53806017:G:C	rs920127076	G	C	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr20	53827061	53827062	chr20:53827062:C:T	rs113186105	C	T	C	Hoxc9_MA0485.1	1	1	-	8.50458699230768	6.9451434183976195	AGCAATGAATCAG
chr20	53828452	53828453	chr20:53828453:G:A	rs75388259	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr20	53894724	53894725	chr20:53894725:T:C	rs6091772	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	53949119	53949120	chr20:53949120:G:A	rs62206656	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	53958506	53958507	chr20:53958507:C:T	rs6091794	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr20	54059964	54059965	chr20:54059965:A:G	rs6127074	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr20	54067590	54067591	chr20:54067591:C:A	rs55973940	C	A	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	54123561	54123562	chr20:54123562:G:A	rs188484185	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	54132725	54132726	chr20:54132726:A:G	rs1038428460	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr20	54148809	54148810	chr20:54148810:A:G	rs4809955	A	G	A	Hoxc9_MA0485.1	4	1	+	9.014363914825388	7.846600200833806	AGACATAAATTAT
chr20	54149655	54149656	chr20:54149656:T:C	rs2762929	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr20	54185246	54185247	chr20:54185247:C:T	rs77954161	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr20	54633855	54633856	chr20:54633856:G:A	rs6023435	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	54633881	54633882	chr20:54633882:C:T	rs6014093	C	T	C	Hoxc9_MA0485.1	0	1	-	7.635128134025801	7.1023130007347985	GACAGTCAATCAT
chr20	54793771	54793772	chr20:54793772:G:T	rs6127281	G	T	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr20	54843654	54843655	chr20:54843655:G:A	rs6069006	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr20	55173849	55173850	chr20:55173850:C:T	rs12329514	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr20	55205784	55205785	chr20:55205785:C:T	rs6127430	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	55415791	55415792	chr20:55415792:G:T	rs114253661	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	55415818	55415819	chr20:55415819:G:T	rs149420950	G	T	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr20	55586871	55586872	chr20:55586872:A:G	rs73282357	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr20	56141828	56141829	chr20:56141829:A:G	rs6127649	A	G	G	Hoxc9_MA0485.1	5	1	-	7.7039513637796935	3.218640001141206	TCCAATCAATCAG
chr20	56194369	56194370	chr20:56194370:G:A	rs1926080	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr20	56289852	56289853	chr20:56289853:G:A	rs113688109	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	56348103	56348104	chr20:56348104:G:T	rs6014698	G	T	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr20	56358047	56358048	chr20:56358048:C:T	rs6127732	C	T	C	Hoxc9_MA0485.1	10	1	+	8.590979276491392	6.78714337218264	GGCAGTCAATCTC
chr20	56441305	56441306	chr20:56441306:C:A	rs114789244	C	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	56689794	56689795	chr20:56689795:G:A	rs6064438	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr20	56810187	56810188	chr20:56810188:G:A	rs6069890	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr20	56898144	56898145	chr20:56898145:T:C	rs6092381	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	57041122	57041123	chr20:57041123:C:T	rs6025330	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	57234821	57234822	chr20:57234822:C:T	rs456554	C	T	T	Hoxc9_MA0485.1	0	1	+	8.609141171941856	8.841484829461224	CCTCATAAATCTT
chr20	57283058	57283059	chr20:57283059:A:C	rs6070041	A	C	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr20	57288303	57288304	chr20:57288304:A:G	rs187632082	A	G	A	Hoxc9_MA0485.1	8	1	+	12.147863609554099	5.245905099419141	AGCCATAAATCAA
chr20	57397277	57397278	chr20:57397278:C:T	rs117234321	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr20	57506231	57506232	chr20:57506232:A:C	rs62206177	A	C	A	Hoxc9_MA0485.1	9	1	-	7.330963526709586	0.44273771233595344	CGTCATTAATCAC
chr20	57585293	57585294	chr20:57585294:C:T	rs2064393	C	T	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	57649069	57649070	chr20:57649070:A:G	rs12929	A	G	A	Hoxc9_MA0485.1	3	1	-	8.156106614916586	9.044359387939211	GCCTGTCAATCAC
chr20	57654013	57654014	chr20:57654014:A:C	rs138353982	A	C	A	Hoxc9_MA0485.1	11	1	+	7.923351779512793	5.8703619246137135	TGCCATAAAACAG
chr20	57684242	57684243	chr20:57684243:A:G	rs114539186	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr20	57857176	57857177	chr20:57857177:G:A	rs11700371	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr20	58075949	58075950	chr20:58075950:T:C	rs6015183	T	C	t	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr20	58082055	58082056	chr20:58082056:T:C	rs113581335	T	C	t	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr20	58142711	58142712	chr20:58142712:G:C	rs58526775	G	C	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr20	58142720	58142721	chr20:58142721:G:A	rs183516676	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr20	58167800	58167801	chr20:58167801:T:C	rs74639209	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	58169371	58169372	chr20:58169372:A:G	rs6026098	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr20	58228946	58228947	chr20:58228947:G:A	rs1011815281	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	58228968	58228969	chr20:58228969:T:G	rs62204359	T	G	T	Hoxc9_MA0485.1	0	1	-	9.316498831946419	8.5616055560523	ATCAATAAATCTC
chr20	58228974	58228975	chr20:58228975:C:T	rs6123781	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr20	58229231	58229232	chr20:58229232:T:C	rs79188559	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr20	58231648	58231649	chr20:58231649:C:T	rs491534	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr20	58407612	58407613	chr20:58407613:G:A	rs4239679	G	A	A	Hoxc9_MA0485.1	2	1	-	10.411217268854392	9.034198791693168	TGCCATAAATTAT
chr20	58449532	58449533	chr20:58449533:C:T	rs6015275	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr20	58553145	58553146	chr20:58553146:T:C	rs6513396	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr20	58634631	58634632	chr20:58634632:G:A	rs74991065	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	58647669	58647670	chr20:58647670:G:A	rs75539795	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	58648157	58648158	chr20:58648158:A:G	rs78603812	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	58756371	58756372	chr20:58756372:C:T	rs6026493	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr20	59014118	59014119	chr20:59014119:C:T	rs151347	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr20	59406084	59406085	chr20:59406085:A:C	rs76875063	A	C	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr20	59406098	59406099	chr20:59406099:A:G	rs78235940	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	59730809	59730810	chr20:59730810:C:T	rs866534	C	T	T	Hoxc9_MA0485.1	0	1	-	8.957439866132594	8.424624732841592	GGACATAAATTAA
chr20	60111886	60111887	chr20:60111887:G:A	rs6071111	G	A	g	Hoxc9_MA0485.1	18	0	-	0	0	.
chr20	60137421	60137422	chr20:60137422:C:A	rs6027337	C	A	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	60339810	60339811	chr20:60339811:A:G	rs354744	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr20	60695698	60695699	chr20:60695699:A:G	rs2426887	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr20	60695723	60695724	chr20:60695724:A:G	rs2426888	A	G	G	Hoxc9_MA0485.1	5	1	-	7.4716077062603246	2.986296343621838	CCCAATCAATCAG
chr20	61103402	61103403	chr20:61103403:C:T	rs4812270	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	61257734	61257735	chr20:61257735:T:C	rs6065080	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr20	61272214	61272215	chr20:61272215:G:A	rs6071562	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	61441767	61441768	chr20:61441768:G:A	rs62200873	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr20	61555701	61555702	chr20:61555702:T:C	rs1936203	T	C	t	Hoxc9_MA0485.1	14	0	-	0	0	.
chr20	61575764	61575765	chr20:61575765:G:T	rs2253214	G	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr20	61589117	61589118	chr20:61589118:T:C	rs6089241	T	C	T	Hoxc9_MA0485.1	8	1	-	9.477303263523	2.5753447533880407	GCAAATAAATCAT
chr20	61764904	61764905	chr20:61764905:C:T	rs6061812	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr20	61860546	61860547	chr20:61860547:G:A	rs34825096	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr20	61877478	61877479	chr20:61877479:T:C	rs62204975	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr20	61900344	61900345	chr20:61900345:A:G	rs13037572	A	G	-	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr20	61932305	61932306	chr20:61932306:G:C	rs77203841	G	C	G	Hoxc9_MA0485.1	0	1	+	8.108683297337997	6.8209748881528744	GCTTGTAAATCAA
chr20	61999159	61999160	chr20:61999160:C:T	rs2296083	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr20	62352958	62352959	chr20:62352959:C:A	rs1056301778	C	A	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr20	62352988	62352989	chr20:62352989:G:A	rs2427298	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr20	62460929	62460930	chr20:62460930:G:C	rs8125995	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr20	62548602	62548603	chr20:62548603:C:A	rs60640728	C	A	c	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	62548631	62548632	chr20:62548632:T:C	rs6089754	T	C	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr20	62557229	62557230	chr20:62557230:T:C	rs6062237	T	C	c	Hoxc9_MA0485.1	11	1	-	7.906656350857202	3.4941229519888335	TGCAATAAAACAC
chr20	62575735	62575736	chr20:62575736:C:T	rs6143054	C	T	c	Hoxc9_MA0485.1	11	1	+	8.955913273323343	10.151313743013402	ACCCATAAATCCA
chr20	62672213	62672214	chr20:62672214:T:C	rs1055196	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr20	62685130	62685131	chr20:62685131:T:C	rs11696171	T	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr20	62685131	62685132	chr20:62685132:G:A	rs532962409	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr20	62737853	62737854	chr20:62737854:G:A	rs111389602	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr20	62845824	62845825	chr20:62845825:T:C	rs57610632	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr20	62991361	62991362	chr20:62991362:G:A	rs4809267	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr20	63077973	63077974	chr20:63077974:T:C	rs6010835	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr20	63095954	63095955	chr20:63095955:C:T	rs6011609	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr20	63105522	63105523	chr20:63105523:G:A	rs16983533	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	63224661	63224662	chr20:63224662:C:T	rs780294035	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr20	63224670	63224671	chr20:63224671:G:A	rs6011676	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr20	63399574	63399575	chr20:63399575:A:G	rs75238596	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr20	63423983	63423984	chr20:63423984:G:A	rs45464194	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr20	63497226	63497227	chr20:63497227:T:C	rs1741618	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr20	63497227	63497228	chr20:63497228:G:T	chr20:63497228:G:T	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr20	63525130	63525131	chr20:63525131:T:C	rs375990	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr20	63533781	63533782	chr20:63533782:G:A	rs6011882	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr20	63616647	63616648	chr20:63616648:G:A	rs6090476	G	A	C	Hoxc9_MA0485.1	4	1	+	8.039750189776955	9.207513903768538	ATCCGTAAATCTA
chr20	63616661	63616662	chr20:63616662:G:C	rs2777932	G	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr20	63639576	63639577	chr20:63639577:C:A	rs909334	C	A	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr20	63691041	63691042	chr20:63691042:C:T	rs567343177	C	T	C	Hoxc9_MA0485.1	0	1	+	6.988739646163367	7.221083303682735	CCCTGTAAATCCC
chr20	63691071	63691072	chr20:63691072:G:C	rs879626044	G	C	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr20	63816514	63816515	chr20:63816515:C:T	chr20:63816515:C:T	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr20	63858435	63858436	chr20:63858436:G:A	rs6062551	G	A	.	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr20	64166519	64166520	chr20:64166520:C:T	rs398111	C	T	C	Hoxc9_MA0485.1	12	1	+	8.437219257184948	8.183222303420395	GGCCATGAATCCC
chr20	64231085	64231086	chr20:64231086:A:C	rs3003144	A	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr21	5246687	5246688	chr21:5246688:A:T	rs1184538356	A	T	.	Hoxc9_MA0485.1	32	0	-	0	0	.
chr21	7319738	7319739	chr21:7319739:G:A	rs1461117028	G	A	.	Hoxc9_MA0485.1	1	1	+	8.72334407084617	7.163900496936109	GGCCATAAATGAC
chr21	8762905	8762906	chr21:8762906:G:A	rs78905506	G	A	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr21	8989351	8989352	chr21:8989352:T:A	rs796230371	T	A	.	Hoxc9_MA0485.1	9	1	+	10.541087849494724	6.7134452809947005	GGTTATAAATCAG
chr21	8989374	8989375	chr21:8989375:A:T	rs373625478	A	T	.	Hoxc9_MA0485.1	32	0	+	0	0	.
chr21	8994008	8994009	chr21:8994009:C:A	rs35515828	C	A	.	Hoxc9_MA0485.1	10	1	+	9.211401558482814	6.527401224608865	AATCATAAATCAA
chr21	8994028	8994029	chr21:8994029:T:A	rs71186716	T	A	.	Hoxc9_MA0485.1	30	0	+	0	0	.
chr21	8994245	8994246	chr21:8994246:G:T	rs34698644	G	T	.	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr21	9005195	9005196	chr21:9005196:A:G	chr21:9005196:A:G	A	G	.	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr21	9005218	9005219	chr21:9005219:A:C	rs77142453	A	C	.	Hoxc9_MA0485.1	4	1	+	8.299168965056017	3.161242283806358	TCCCATCAATCTC
chr21	9005219	9005220	chr21:9005220:T:C	rs74708827	T	C	.	Hoxc9_MA0485.1	5	1	+	8.299168965056017	3.813857602417531	TCCCATCAATCTC
chr21	9005234	9005235	chr21:9005235:C:T	rs1406915761	C	T	.	Hoxc9_MA0485.1	20	0	+	0	0	.
chr21	9010672	9010673	chr21:9010673:T:C	rs372023702	T	C	.	Hoxc9_MA0485.1	8	1	-	12.412828539619873	5.510870029484917	GGCCATAAATCTT
chr21	9731569	9731570	chr21:9731570:G:A	rs1044823845	G	A	.	Hoxc9_MA0485.1	17	0	+	0	0	.
chr21	9942839	9942840	chr21:9942840:A:C	rs78348618	A	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr21	9942859	9942860	chr21:9942860:G:A	rs867449292	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr21	10375193	10375194	chr21:10375194:A:G	rs62222700	A	G	.	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr21	10401136	10401137	chr21:10401137:G:A	rs61621797	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr21	10401157	10401158	chr21:10401158:T:C	rs144246340	T	C	T	Hoxc9_MA0485.1	0	1	-	8.752327549399304	9.285142682690307	ATCAGTAAATCAT
chr21	13409376	13409377	chr21:13409377:C:A	chr21:13409377:C:A	C	A	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr21	14027542	14027543	chr21:14027543:T:C	rs2298673	T	C	N	Hoxc9_MA0485.1	21	0	-	0	0	.
chr21	14087062	14087063	chr21:14087063:G:T	rs59000260	G	T	-	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr21	14092328	14092329	chr21:14092329:G:A	rs58025195	G	A	-	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr21	14092339	14092340	chr21:14092340:G:A	rs56964975	G	A	-	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr21	14103193	14103194	chr21:14103194:T:C	rs1974407	T	C	c	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr21	14211307	14211308	chr21:14211308:T:C	rs371195	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr21	14275109	14275110	chr21:14275110:A:C	rs2822522	A	C	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr21	14362329	14362330	chr21:14362330:G:A	rs73892152	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr21	14490353	14490354	chr21:14490354:C:G	rs2822702	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr21	14514294	14514295	chr21:14514295:T:C	rs2822711	T	C	C	Hoxc9_MA0485.1	2	1	+	9.51638648564257	10.893404962803794	TGTCATAAATCTG
chr21	14532070	14532071	chr21:14532071:G:C	rs143504308	G	C	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr21	14544269	14544270	chr21:14544270:G:A	rs11702574	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr21	14552092	14552093	chr21:14552093:G:A	rs6516875	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr21	14552103	14552104	chr21:14552104:G:A	rs6516876	G	A	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr21	14902165	14902166	chr21:14902166:T:G	rs1002458	T	G	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr21	15211415	15211416	chr21:15211416:A:G	rs2823146	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr21	15438157	15438158	chr21:15438158:T:C	rs114162544	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr21	16402735	16402736	chr21:16402736:T:C	rs1900938	T	C	T	Hoxc9_MA0485.1	5	1	+	8.582453902042406	4.09714253940392	TTCCATAAATTAC
chr21	16457769	16457770	chr21:16457770:C:T	rs78011801	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr21	16533720	16533721	chr21:16533721:T:C	rs77737879	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr21	16580240	16580241	chr21:16580241:T:C	rs17210190	T	C	T	Hoxc9_MA0485.1	4	1	-	8.14119757335779	6.973433859366204	AGCCATAACTCAC
chr21	16870328	16870329	chr21:16870329:T:C	rs73388340	T	C	T	Hoxc9_MA0485.1	5	1	+	9.668234027436279	5.182922664797794	TTCCATAAATCAG
chr21	17004298	17004299	chr21:17004299:T:A	rs1176359961	T	A	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr21	17304958	17304959	chr21:17304959:T:C	rs62241465	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr21	17350427	17350428	chr21:17350428:T:G	chr21:17350428:T:G	T	G	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr21	17452084	17452085	chr21:17452085:G:A	rs2824312	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr21	18118509	18118510	chr21:18118510:A:G	rs2824635	A	G	A	Hoxc9_MA0485.1	8	1	+	10.055137694231163	3.153179184096203	AATCATAAATCAC
chr21	18118978	18118979	chr21:18118979:A:C	rs2824636	A	C	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr21	18118983	18118984	chr21:18118984:G:A	rs9976869	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr21	18714968	18714969	chr21:18714969:G:A	rs963638	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr21	18894456	18894457	chr21:18894457:G:A	rs416336	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr21	19119883	19119884	chr21:19119884:T:C	rs17179114	T	C	T	Hoxc9_MA0485.1	6	1	-	8.445901397887544	5.411695631378124	AGCCATAAAACAG
chr21	19228431	19228432	chr21:19228432:C:G	rs1001852214	C	G	C	Hoxc9_MA0485.1	2	1	+	10.654842470961357	7.9589583292400485	ATCCATAAATCAT
chr21	19549032	19549033	chr21:19549033:G:A	rs397535	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr21	20232646	20232647	chr21:20232647:T:C	rs77166517	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr21	20260012	20260013	chr21:20260013:A:C	rs1475574	A	C	A	Hoxc9_MA0485.1	4	1	+	9.9530711684348	4.815144487185139	TCTCATAAATCAC
chr21	20545574	20545575	chr21:20545575:A:G	rs2826377	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr21	20900948	20900949	chr21:20900949:G:A	rs34655225	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr21	21001000	21001001	chr21:21001001:A:T	rs73228134	A	T	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr21	21464953	21464954	chr21:21464954:A:G	rs116767608	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr21	21466872	21466873	chr21:21466873:G:C	rs762441	G	C	C	Hoxc9_MA0485.1	12	1	-	8.472295488076197	7.754239709161319	GTTAATAAATCTC
chr21	21740238	21740239	chr21:21740239:C:T	rs114507380	C	T	C	Hoxc9_MA0485.1	1	1	-	8.052072888367556	6.492629314457493	TGCTATTAATCAC
chr21	21952686	21952687	chr21:21952687:G:A	rs2827151	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr21	23021219	23021220	chr21:23021220:A:G	rs244271	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr21	23108820	23108821	chr21:23108821:T:G	rs2827865	T	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr21	23418015	23418016	chr21:23418016:C:G	rs2828134	C	G	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr21	23607578	23607579	chr21:23607579:A:G	rs2828325	A	G	A	Hoxc9_MA0485.1	8	1	+	11.84935001851527	4.947391508380314	AGCTATAAATCAT
chr21	23612748	23612749	chr21:23612749:G:T	rs62218360	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr21	23826767	23826768	chr21:23826768:G:T	rs207466	G	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr21	24027643	24027644	chr21:24027644:A:G	rs2828713	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr21	24460330	24460331	chr21:24460331:G:A	rs16999900	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr21	24707818	24707819	chr21:24707819:C:G	rs2829283	C	G	t	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr21	25204212	25204213	chr21:25204213:T:C	rs720164	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr21	25382531	25382532	chr21:25382532:G:A	rs66569025	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr21	25382556	25382557	chr21:25382557:G:A	rs66800260	G	A	A	Hoxc9_MA0485.1	1	1	-	7.905136293267162	6.961336454022297	GCCCATCAATCCT
chr21	25428765	25428766	chr21:25428766:G:C	rs2829749	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr21	25428810	25428811	chr21:25428811:G:T	rs8130581	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr21	25606637	25606638	chr21:25606638:A:G	rs3989369	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr21	25607239	25607240	chr21:25607240:A:G	rs896402108	A	G	A	Hoxc9_MA0485.1	8	1	+	8.808197962372391	1.9062394522374335	TCCCATAAATTAG
chr21	25731302	25731303	chr21:25731303:C:T	rs2829887	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr21	25772862	25772863	chr21:25772863:A:G	rs4817056	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr21	25806238	25806239	chr21:25806239:C:T	rs2829914	C	T	c	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr21	25903826	25903827	chr21:25903827:C:T	rs1039965699	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr21	25936989	25936990	chr21:25936990:A:G	chr21:25936990:A:G	A	G	A	Hoxc9_MA0485.1	9	1	-	9.814895946953472	2.9266701325798383	TGAAATAAATCAC
chr21	25954662	25954663	chr21:25954663:A:G	rs45537238	A	G	G	Hoxc9_MA0485.1	4	1	+	11.008435920100553	9.84067220610897	GCTCATAAATCAC
chr21	25957628	25957629	chr21:25957629:A:G	rs73336796	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr21	26066146	26066147	chr21:26066147:G:A	rs9653649	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr21	26238886	26238887	chr21:26238887:A:G	rs2830136	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr21	26297896	26297897	chr21:26297897:A:G	rs414477	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr21	26571815	26571816	chr21:26571816:G:A	rs222978	G	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr21	26571831	26571832	chr21:26571832:G:A	rs67851275	G	A	G	Hoxc9_MA0485.1	1	1	+	8.387410604663119	6.827967030753059	TGCCATAAAACAT
chr21	26708608	26708609	chr21:26708609:A:G	rs181183039	A	G	A	Hoxc9_MA0485.1	0	1	+	10.106797105739128	10.63961223903013	ACCTATAAATCTC
chr21	26775954	26775955	chr21:26775955:G:A	rs62215731	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr21	26799917	26799918	chr21:26799918:A:G	rs7282063	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr21	26838337	26838338	chr21:26838338:T:C	rs229042	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr21	26871845	26871846	chr21:26871846:C:T	rs115637690	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr21	26871891	26871892	chr21:26871892:C:T	rs60329675	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr21	26934853	26934854	chr21:26934854:C:T	rs162495	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr21	27047907	27047908	chr21:27047908:A:G	rs115181066	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr21	27192890	27192891	chr21:27192891:C:G	rs7283638	C	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr21	27196772	27196773	chr21:27196773:C:T	rs34647816	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr21	27206836	27206837	chr21:27206837:G:A	rs2830780	G	A	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr21	27799791	27799792	chr21:27799792:T:A	rs187224	T	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr21	28012119	28012120	chr21:28012120:T:G	rs113739013	T	G	T	Hoxc9_MA0485.1	7	1	-	7.988592863275701	1.0843637940701256	GGCAATAAATGAC
chr21	28035191	28035192	chr21:28035192:G:A	rs62209735	G	A	a	Hoxc9_MA0485.1	24	0	+	0	0	.
chr21	28099169	28099170	chr21:28099170:G:T	rs7281081	G	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr21	28200823	28200824	chr21:28200824:C:T	rs9305361	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr21	28439980	28439981	chr21:28439981:T:C	rs117112958	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr21	28537896	28537897	chr21:28537897:T:A	rs141406159	T	A	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr21	28672026	28672027	chr21:28672027:G:A	rs9984823	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr21	28885069	28885070	chr21:28885070:G:C	rs112161401	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr21	28885095	28885096	chr21:28885096:G:A	rs1997605	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr21	28885104	28885105	chr21:28885105:G:T	rs182936245	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr21	29024545	29024546	chr21:29024546:C:T	rs114353662	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr21	29076758	29076759	chr21:29076759:A:T	rs577569228	A	T	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr21	29118905	29118906	chr21:29118906:T:A	rs9983651	T	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr21	29508493	29508494	chr21:29508494:T:G	chr21:29508494:T:G	T	G	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr21	29646449	29646450	chr21:29646450:G:T	rs743321	G	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr21	29647258	29647259	chr21:29647259:G:T	rs55838877	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	30028150	30028151	chr21:30028151:G:A	rs408264	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr21	30094179	30094180	chr21:30094180:C:T	rs2832598	C	T	T	Hoxc9_MA0485.1	4	1	-	8.270362504380532	9.438126218372116	AGGCGTAAATCTC
chr21	30094181	30094182	chr21:30094182:C:T	rs13049863	C	T	T	Hoxc9_MA0485.1	2	1	-	8.270362504380532	9.046843673698087	AGGCGTAAATCTC
chr21	30138981	30138982	chr21:30138982:C:T	rs79627262	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr21	30469531	30469532	chr21:30469532:C:T	rs144007963	C	T	C	Hoxc9_MA0485.1	12	1	-	8.547637596894289	8.421957240060818	CTCTATAAATCAG
chr21	30579659	30579660	chr21:30579660:G:A	rs198905	G	A	.	Hoxc9_MA0485.1	15	0	-	0	0	.
chr21	30579675	30579676	chr21:30579676:C:T	rs2832950	C	T	.	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr21	31104200	31104201	chr21:31104201:A:G	rs7280468	A	G	g	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr21	31151909	31151910	chr21:31151910:A:G	rs986253755	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr21	31151913	31151914	chr21:31151914:C:T	rs2833306	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr21	31364713	31364714	chr21:31364714:T:C	rs525896	T	C	T	Hoxc9_MA0485.1	8	1	-	7.891771993646578	0.9898134835116179	ATCCATCAATCAA
chr21	31430464	31430465	chr21:31430465:A:G	rs67308615	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr21	31491860	31491861	chr21:31491861:C:T	rs2409409	C	T	C	Hoxc9_MA0485.1	3	1	+	9.268254631848604	8.380001858825981	GTACATAAATCAT
chr21	31520925	31520926	chr21:31520926:T:A	rs3787685	T	A	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr21	31670279	31670280	chr21:31670280:T:G	chr21:31670280:T:G	T	G	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr21	31733451	31733452	chr21:31733452:G:A	rs73201545	G	A	G	Hoxc9_MA0485.1	0	1	-	9.044756133177573	9.27709979069694	CCCCATAAATCCC
chr21	31810083	31810084	chr21:31810084:A:G	rs17586113	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	31866487	31866488	chr21:31866488:A:G	rs8133793	A	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr21	32186912	32186913	chr21:32186913:G:A	rs76717225	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr21	32191558	32191559	chr21:32191559:A:G	rs113442259	A	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr21	32371318	32371319	chr21:32371319:G:A	rs7283020	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr21	32424283	32424284	chr21:32424284:C:T	rs73190656	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr21	32509504	32509505	chr21:32509505:A:G	rs9978838	A	G	a	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr21	32844952	32844953	chr21:32844953:G:A	rs2833975	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr21	33119677	33119678	chr21:33119678:A:G	rs724208	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr21	33229302	33229303	chr21:33229303:T:G	rs73903134	T	G	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr21	33417500	33417501	chr21:33417501:T:C	rs2834211	T	C	T	Hoxc9_MA0485.1	2	1	+	8.92249259080985	10.299511067971071	AGTTATAAATTAC
chr21	33642169	33642170	chr21:33642170:G:A	rs975950069	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr21	33642181	33642182	chr21:33642182:C:A	rs147791026	C	A	C	Hoxc9_MA0485.1	2	1	+	11.107381919474365	9.187978947070611	GACCATAAATCTC
chr21	33858025	33858026	chr21:33858026:C:T	rs882365	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr21	33858028	33858029	chr21:33858029:G:T	rs882364	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	34543513	34543514	chr21:34543514:T:C	rs2284580	T	C	t	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr21	34649598	34649599	chr21:34649599:T:C	rs2027597	T	C	T	Hoxc9_MA0485.1	12	1	+	10.578329247497521	10.832326201262074	GGCTATAAATTAT
chr21	34732597	34732598	chr21:34732598:C:A	rs116143361	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr21	34771709	34771710	chr21:34771710:C:T	rs73362806	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr21	34771750	34771751	chr21:34771751:A:G	rs116834492	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr21	34802231	34802232	chr21:34802232:G:C	rs1892605	G	C	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr21	34874905	34874906	chr21:34874906:G:A	rs113529220	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr21	34874933	34874934	chr21:34874934:C:T	rs61658023	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr21	34882647	34882648	chr21:34882648:C:T	rs74866945	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr21	34898113	34898114	chr21:34898114:C:T	rs2409561	C	T	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr21	34992538	34992539	chr21:34992539:T:C	rs59680634	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr21	35017640	35017641	chr21:35017641:T:C	rs2834735	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr21	35067033	35067034	chr21:35067034:G:A	rs2156401	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr21	35090608	35090609	chr21:35090609:T:C	rs2242902	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr21	35402555	35402556	chr21:35402556:C:G	rs2242730	C	G	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr21	35520482	35520483	chr21:35520483:C:T	rs1627997	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr21	35525514	35525515	chr21:35525515:C:T	rs117263255	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr21	35525559	35525560	chr21:35525560:A:G	rs445984	A	G	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr21	35559619	35559620	chr21:35559620:G:A	rs75308374	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr21	35562911	35562912	chr21:35562912:T:C	rs16993359	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	36004466	36004467	chr21:36004467:G:T	rs7282699	G	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr21	36141856	36141857	chr21:36141857:G:A	rs9305578	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr21	36141873	36141874	chr21:36141874:G:T	rs45614331	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr21	36158202	36158203	chr21:36158203:C:T	rs2242807	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	36158234	36158235	chr21:36158235:A:G	rs2242808	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr21	36173807	36173808	chr21:36173808:G:A	rs12482399	G	A	a	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr21	36337340	36337341	chr21:36337341:G:A	rs2835336	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr21	36337368	36337369	chr21:36337369:A:C	rs2835337	A	C	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr21	36436472	36436473	chr21:36436473:G:C	rs12710437	G	C	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr21	36454188	36454189	chr21:36454189:G:A	rs7283948	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr21	36454325	36454326	chr21:36454326:C:T	rs148163132	C	T	c	Hoxc9_MA0485.1	31	0	-	0	0	.
chr21	36499817	36499818	chr21:36499818:T:A	rs2000544	T	A	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr21	36551170	36551171	chr21:36551171:T:C	rs366381	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr21	36567311	36567312	chr21:36567312:G:A	rs140984138	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr21	36567476	36567477	chr21:36567477:G:C	rs445103	G	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr21	36695348	36695349	chr21:36695349:G:A	rs57310327	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr21	36847242	36847243	chr21:36847243:C:T	rs2835489	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr21	36917910	36917911	chr21:36917911:C:T	rs16994586	C	T	C	Hoxc9_MA0485.1	3	1	+	8.010579301681316	7.12232652865869	CCACGTAAATCAC
chr21	36964533	36964534	chr21:36964534:A:G	rs1571700	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr21	37017678	37017679	chr21:37017679:G:A	rs73904218	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr21	37155454	37155455	chr21:37155455:C:T	rs80347649	C	T	C	Hoxc9_MA0485.1	10	1	+	8.841484829461224	7.037648925152474	TCTCATAAATCTT
chr21	37531015	37531016	chr21:37531016:A:G	rs141001020	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr21	37565785	37565786	chr21:37565786:C:T	rs111811974	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	37565815	37565816	chr21:37565816:A:G	rs74648408	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr21	37565818	37565819	chr21:37565819:A:G	rs139895462	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr21	38255658	38255659	chr21:38255659:C:G	rs7275310	C	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr21	38277722	38277723	chr21:38277723:G:C	rs919151748	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr21	38303444	38303445	chr21:38303445:G:A	rs528202760	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr21	38344158	38344159	chr21:38344159:A:T	rs73211984	A	T	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr21	38447906	38447907	chr21:38447907:C:T	rs2836411	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr21	38520720	38520721	chr21:38520721:T:C	rs117780186	T	C	T	Hoxc9_MA0485.1	8	1	-	7.254243428702986	0.3522849185680265	TCCAGTCAATCAC
chr21	38591199	38591200	chr21:38591200:C:A	rs2836544	C	A	A	Hoxc9_MA0485.1	6	1	-	7.713216754471251	7.218698055443154	GGACATGAATCTC
chr21	38714532	38714533	chr21:38714533:T:C	rs80335778	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr21	38748005	38748006	chr21:38748006:A:G	rs2836658	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr21	38808458	38808459	chr21:38808459:T:A	rs1209953	T	A	T	Hoxc9_MA0485.1	11	1	-	9.85166638338448	8.994076998175457	GGCAATAAATAAT
chr21	38808473	38808474	chr21:38808474:G:A	rs548863871	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr21	38943338	38943339	chr21:38943339:T:C	rs116689379	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr21	38987217	38987218	chr21:38987218:A:T	rs1537108	A	T	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr21	39076175	39076176	chr21:39076176:G:A	rs2836872	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr21	39118469	39118470	chr21:39118470:T:G	rs2063972	T	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr21	39472373	39472374	chr21:39472374:T:C	rs2178881	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr21	39484870	39484871	chr21:39484871:A:G	rs146244831	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr21	39514888	39514889	chr21:39514889:T:C	rs2246616	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr21	39714364	39714365	chr21:39714365:T:C	rs62235491	T	C	T	Hoxc9_MA0485.1	12	1	-	9.218720247372987	9.344400604206458	GACAGTAAATCAA
chr21	39768527	39768528	chr21:39768528:T:C	rs2837191	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr21	39920522	39920523	chr21:39920523:T:C	rs9978253	T	C	C	Hoxc9_MA0485.1	8	1	-	12.256848537731978	5.35489002759702	AGCAATAAATCAC
chr21	39938445	39938446	chr21:39938446:C:G	rs2837309	C	G	G	Hoxc9_MA0485.1	0	1	+	8.787349616382285	10.075058025567406	CCCAATAAATCTG
chr21	39938473	39938474	chr21:39938474:G:A	rs142276583	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr21	40121103	40121104	chr21:40121104:G:C	rs116296570	G	C	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr21	40532564	40532565	chr21:40532565:T:G	rs2837682	T	G	T	Hoxc9_MA0485.1	0	1	-	8.790986564779843	8.036093288885723	ACATATAAATCAT
chr21	40537333	40537334	chr21:40537334:G:A	rs11700429	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr21	40581766	40581767	chr21:40581767:G:A	rs2837716	G	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr21	40581786	40581787	chr21:40581787:G:A	rs2837717	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr21	40675519	40675520	chr21:40675520:C:T	rs1022424	C	T	T	Hoxc9_MA0485.1	4	1	-	8.41369157506461	9.581455289056192	AGCTGTAAATTAG
chr21	40698500	40698501	chr21:40698501:G:T	rs146250206	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr21	40832227	40832228	chr21:40832228:T:C	rs2837846	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr21	41280789	41280790	chr21:41280790:C:T	rs8126886	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr21	41351044	41351045	chr21:41351045:T:A	rs77215024	T	A	T	Hoxc9_MA0485.1	8	1	-	9.235015389519921	2.3330568793849613	TCTCATAAATCAG
chr21	41467064	41467065	chr21:41467065:G:A	rs73372163	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr21	41467110	41467111	chr21:41467111:G:A	rs73372166	G	A	g	Hoxc9_MA0485.1	30	0	+	0	0	.
chr21	41809939	41809940	chr21:41809940:A:C	rs9978873	A	C	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr21	41968808	41968809	chr21:41968809:A:G	rs73221467	A	G	a	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	42120290	42120291	chr21:42120291:G:A	rs189801595	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr21	42128128	42128129	chr21:42128129:T:C	rs2839470	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr21	42159233	42159234	chr21:42159234:G:T	rs9975104	G	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr21	42359294	42359295	chr21:42359295:C:A	rs8130158	C	A	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr21	42422415	42422416	chr21:42422416:C:T	rs79635471	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr21	42427787	42427788	chr21:42427788:C:T	rs75678806	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr21	42533024	42533025	chr21:42533025:G:C	rs117324463	G	C	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr21	42533026	42533027	chr21:42533027:T:C	rs145036036	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr21	42561182	42561183	chr21:42561183:G:A	rs74995205	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr21	42584891	42584892	chr21:42584892:A:G	rs13049624	A	G	A	Hoxc9_MA0485.1	3	1	+	7.619585902390702	2.8379406379754806	CCCAGTAAATCTG
chr21	42655573	42655574	chr21:42655574:C:T	rs149896601	C	T	C	Hoxc9_MA0485.1	4	1	-	6.677523027886457	7.845286741878039	GGCAGTCAATCCG
chr21	42878293	42878294	chr21:42878294:G:A	rs17178758	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr21	42890253	42890254	chr21:42890254:G:A	rs11203163	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr21	42956099	42956100	chr21:42956100:C:T	rs28751956	C	T	C	Hoxc9_MA0485.1	0	1	-	10.608992635311122	10.076177502020121	GGCCATAAATTTT
chr21	43029311	43029312	chr21:43029312:G:A	rs78449529	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr21	43311348	43311349	chr21:43311349:A:T	rs116960653	A	T	.	Hoxc9_MA0485.1	18	0	+	0	0	.
chr21	43363051	43363052	chr21:43363052:C:T	rs75411477	C	T	.	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr21	43758259	43758260	chr21:43758260:T:G	chr21:43758260:T:G	T	G	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr21	44592642	44592643	chr21:44592643:C:T	rs418260	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr21	44660679	44660680	chr21:44660680:C:G	rs12106369	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr21	44780346	44780347	chr21:44780347:C:T	rs73232944	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr21	44780354	44780355	chr21:44780355:T:C	rs4818976	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr21	45406597	45406598	chr21:45406598:A:C	rs56072431	A	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr21	46018898	46018899	chr21:46018899:C:T	rs4819182	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr21	46432312	46432313	chr21:46432313:C:T	rs7283044	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr21	46627955	46627956	chr21:46627956:T:A	rs34038027	T	A	T	Hoxc9_MA0485.1	8	1	-	8.602619744354001	1.7006612342190432	TACCATAAATCCT
chr22	11036707	11036708	chr22:11036708:C:T	rs1235584723	C	T	.	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr22	11597657	11597658	chr22:11597658:T:C	rs1348570683	T	C	.	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr22	12692572	12692573	chr22:12692573:C:T	rs1243812742	C	T	.	Hoxc9_MA0485.1	14	0	+	0	0	.
chr22	15631571	15631572	chr22:15631572:C:T	rs8141338	C	T	.	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	15631579	15631580	chr22:15631580:T:A	rs61203019	T	A	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr22	16699487	16699488	chr22:16699488:T:C	rs774724149	T	C	.	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr22	16747905	16747906	chr22:16747906:G:A	rs17433377	G	A	.	Hoxc9_MA0485.1	18	0	-	0	0	.
chr22	16825213	16825214	chr22:16825214:T:G	rs175140	T	G	.	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr22	17074663	17074664	chr22:17074664:G:A	rs9605211	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	17166971	17166972	chr22:17166972:T:G	rs5748923	T	G	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr22	17166988	17166989	chr22:17166989:C:T	rs5748924	C	T	C	Hoxc9_MA0485.1	0	1	-	7.744940078814854	7.212124945523851	GCCTATGAATCAG
chr22	17176487	17176488	chr22:17176488:C:T	rs2108582	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr22	17284614	17284615	chr22:17284615:G:A	rs5749010	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr22	17359637	17359638	chr22:17359638:C:T	rs528666981	C	T	C	Hoxc9_MA0485.1	1	1	+	7.044520275943013	6.100720436698147	GCCTGTCAATCTT
chr22	17400524	17400525	chr22:17400525:G:C	rs28360596	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr22	17407637	17407638	chr22:17407638:A:G	rs4819581	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr22	17479398	17479399	chr22:17479399:T:C	rs5747200	T	C	C	Hoxc9_MA0485.1	5	1	+	8.153451837742939	3.6681404751044524	GTCCATGAATCAT
chr22	17673254	17673255	chr22:17673255:C:G	rs78611006	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr22	17878509	17878510	chr22:17878510:C:T	rs112711269	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	17896873	17896874	chr22:17896874:C:T	rs61739477	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	17961312	17961313	chr22:17961313:A:G	rs28550912	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	18146552	18146553	chr22:18146553:A:G	rs361753	A	G	.	Hoxc9_MA0485.1	31	0	-	0	0	.
chr22	19047919	19047920	chr22:19047920:G:A	rs41277590	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr22	19171531	19171532	chr22:19171532:T:A	chr22:19171532:T:A	T	A	T	Hoxc9_MA0485.1	9	1	+	7.33207409996618	3.5044315314661545	CCCAATCAATCTC
chr22	19406473	19406474	chr22:19406474:T:C	rs117784405	T	C	T	Hoxc9_MA0485.1	5	1	+	7.0957558676310954	2.610444504992609	GAGCATCAATCAC
chr22	19479362	19479363	chr22:19479363:T:C	rs5992403	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr22	19619868	19619869	chr22:19619869:G:A	rs191496354	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr22	19621133	19621134	chr22:19621134:A:G	rs13054962	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr22	19633487	19633488	chr22:19633488:C:T	rs1476445	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr22	19648592	19648593	chr22:19648593:T:C	rs528176308	T	C	T	Hoxc9_MA0485.1	7	1	-	7.650665623983683	0.7464365547781049	AGCTGTCAATCTT
chr22	19800212	19800213	chr22:19800213:C:T	rs748806	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	19843981	19843982	chr22:19843982:C:T	rs955366843	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr22	19879665	19879666	chr22:19879666:T:C	rs13054371	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr22	19967455	19967456	chr22:19967456:G:A	rs113499749	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr22	19994170	19994171	chr22:19994171:C:T	rs78859690	C	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr22	20235117	20235118	chr22:20235118:G:A	rs9618757	G	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr22	20636774	20636775	chr22:20636775:T:C	rs580204	T	C	N	Hoxc9_MA0485.1	3	1	+	8.172444150136137	9.06069692315876	AGATGTAAATCAA
chr22	21841116	21841117	chr22:21841117:T:C	rs9610400	T	C	t	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	21909762	21909763	chr22:21909763:A:C	rs240051	A	C	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr22	21909796	21909797	chr22:21909797:C:T	rs6000052	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr22	22156976	22156977	chr22:22156977:T:C	rs4821790	T	C	.	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr22	22168488	22168489	chr22:22168489:G:A	rs5757170	G	A	.	Hoxc9_MA0485.1	18	0	-	0	0	.
chr22	22196561	22196562	chr22:22196562:G:C	rs2282664	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr22	22480403	22480404	chr22:22480404:T:C	rs76062800	T	C	c	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	22569685	22569686	chr22:22569686:C:T	rs737891	C	T	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr22	22684756	22684757	chr22:22684757:C:T	rs536043735	C	T	.	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr22	22698281	22698282	chr22:22698282:G:T	rs5751516	G	T	.	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr22	22759069	22759070	chr22:22759070:G:T	rs4134484	G	T	.	Hoxc9_MA0485.1	1	1	-	9.466730557150878	9.046247464572492	CCTCATAAATCAT
chr22	22770257	22770258	chr22:22770258:T:C	rs149513398	T	C	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	22774553	22774554	chr22:22774554:C:G	rs140813290	C	G	.	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr22	22795388	22795389	chr22:22795389:T:C	rs6003307	T	C	.	Hoxc9_MA0485.1	31	0	+	0	0	.
chr22	22930213	22930214	chr22:22930214:A:T	rs9612166	A	T	.	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr22	23016439	23016440	chr22:23016440:T:C	rs9612207	T	C	t	Hoxc9_MA0485.1	4	1	-	10.876709534148205	9.708945820156622	TGCAATAAATCTC
chr22	23080703	23080704	chr22:23080704:T:C	rs3827315	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr22	23163210	23163211	chr22:23163211:A:G	rs2008176	A	G	g	Hoxc9_MA0485.1	4	1	+	8.469347117081618	7.301583403090036	GGCCATAAATGAT
chr22	23242253	23242254	chr22:23242254:A:G	rs80233084	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr22	23513330	23513331	chr22:23513331:C:T	rs115426736	C	T	c	Hoxc9_MA0485.1	20	0	-	0	0	.
chr22	23513334	23513335	chr22:23513335:A:G	rs5759867	A	G	N	Hoxc9_MA0485.1	16	0	-	0	0	.
chr22	23541046	23541047	chr22:23541047:T:C	rs6003791	T	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr22	23891984	23891985	chr22:23891985:A:G	rs738806	A	G	G	Hoxc9_MA0485.1	6	1	+	6.668248518548791	3.63404275203937	CGCCATAACTCAG
chr22	23915403	23915404	chr22:23915404:A:T	rs57687200	A	T	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr22	23925405	23925406	chr22:23925406:A:G	rs143180984	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr22	24002422	24002423	chr22:24002423:A:C	rs201331544	A	C	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr22	24037984	24037985	chr22:24037985:T:C	rs987445493	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr22	24290069	24290070	chr22:24290070:A:G	rs17004893	A	G	A	Hoxc9_MA0485.1	5	1	-	6.563507568282806	2.07819620564432	GCCAATGAATCCC
chr22	24290073	24290074	chr22:24290074:G:A	chr22:24290074:G:A	G	A	G	Hoxc9_MA0485.1	1	1	-	6.563507568282806	5.619707729037941	GCCAATGAATCCC
chr22	24482835	24482836	chr22:24482836:T:C	rs5760446	T	C	t	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr22	24728743	24728744	chr22:24728744:C:T	rs738825	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr22	24977778	24977779	chr22:24977779:T:C	rs117116327	T	C	T	Hoxc9_MA0485.1	8	1	-	8.72911206810968	1.8271535579747222	AGCAATAAATAAA
chr22	25008341	25008342	chr22:25008342:T:C	rs5996810	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr22	25110811	25110812	chr22:25110812:C:T	rs713989	C	T	C	Hoxc9_MA0485.1	2	1	+	8.143953451118414	6.7669349739571905	AACCATGAATCAT
chr22	25169711	25169712	chr22:25169712:G:T	rs61015661	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr22	25360711	25360712	chr22:25360712:A:C	rs141967952	A	C	.	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr22	25419990	25419991	chr22:25419991:G:C	rs185553809	G	C	g	Hoxc9_MA0485.1	25	0	-	0	0	.
chr22	25420024	25420025	chr22:25420025:G:C	rs190527597	G	C	g	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr22	25522741	25522742	chr22:25522742:A:G	rs680355	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr22	25712424	25712425	chr22:25712425:G:A	rs148223190	G	A	t	Hoxc9_MA0485.1	20	0	-	0	0	.
chr22	25736884	25736885	chr22:25736885:C:T	chr22:25736885:C:T	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr22	25739961	25739962	chr22:25739962:C:T	rs9608419	C	T	c	Hoxc9_MA0485.1	13	0	+	0	0	.
chr22	25747312	25747313	chr22:25747313:C:G	rs133858	C	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr22	25797856	25797857	chr22:25797857:C:T	rs2877299	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr22	25881587	25881588	chr22:25881588:T:C	rs2285196	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr22	26032254	26032255	chr22:26032255:C:G	rs8139222	C	G	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr22	26032298	26032299	chr22:26032299:G:A	rs75235850	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	26186469	26186470	chr22:26186470:T:C	rs134762	T	C	T	Hoxc9_MA0485.1	8	1	-	8.779336346362992	1.877377836228035	GGCTATAAATTCC
chr22	26234488	26234489	chr22:26234489:C:T	rs11703706	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr22	26234489	26234490	chr22:26234490:G:A	rs926920	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	26268086	26268087	chr22:26268087:A:C	rs137179	A	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	26462867	26462868	chr22:26462868:G:A	rs2285214	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr22	26564822	26564823	chr22:26564823:A:G	rs2267094	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	26684317	26684318	chr22:26684318:G:A	rs6005134	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr22	26684319	26684320	chr22:26684320:G:A	rs6005135	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr22	26777522	26777523	chr22:26777523:G:T	rs2157419	G	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	26777570	26777571	chr22:26777571:T:C	rs6005167	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr22	26838207	26838208	chr22:26838208:C:T	rs136499	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr22	26838253	26838254	chr22:26838254:T:G	chr22:26838254:T:G	T	G	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr22	26864435	26864436	chr22:26864436:C:T	chr22:26864436:C:T	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr22	26953270	26953271	chr22:26953271:T:G	rs966560	T	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr22	26981765	26981766	chr22:26981766:C:T	rs550916689	C	T	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	26998879	26998880	chr22:26998880:C:T	rs6005260	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	27022947	27022948	chr22:27022948:G:A	rs16983406	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr22	27153594	27153595	chr22:27153595:G:A	rs79064616	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr22	27153627	27153628	chr22:27153628:C:T	rs5997186	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr22	27163939	27163940	chr22:27163940:G:A	rs7287230	G	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr22	27194018	27194019	chr22:27194019:C:T	rs544376	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	27239290	27239291	chr22:27239291:C:T	rs140921593	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr22	27313480	27313481	chr22:27313481:T:C	rs116848662	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	27328734	27328735	chr22:27328735:C:T	rs8135866	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	27389788	27389789	chr22:27389789:C:G	rs138026692	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr22	27438538	27438539	chr22:27438539:A:G	rs999224	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr22	27456993	27456994	chr22:27456994:C:T	rs77233712	C	T	C	Hoxc9_MA0485.1	0	1	+	8.652569554664396	8.884913212183763	CGGTATAAATCAC
chr22	27487879	27487880	chr22:27487880:T:C	rs5762196	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr22	27508872	27508873	chr22:27508873:T:G	rs4822897	T	G	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr22	27579240	27579241	chr22:27579241:T:C	rs2065059	T	C	C	Hoxc9_MA0485.1	4	1	-	7.55764862486492	6.389884910873337	AGCTATAAAACAG
chr22	27614367	27614368	chr22:27614368:C:G	rs116884561	C	G	C	Hoxc9_MA0485.1	12	1	-	9.764883696784846	10.482939475699725	GCCAGTAAATCAG
chr22	27641722	27641723	chr22:27641723:G:A	rs16985231	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr22	27646072	27646073	chr22:27646073:G:A	rs134021	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr22	27699649	27699650	chr22:27699650:G:C	rs78900253	G	C	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr22	27704418	27704419	chr22:27704419:C:T	rs73883613	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr22	27704437	27704438	chr22:27704438:T:C	rs5762322	T	C	T	Hoxc9_MA0485.1	4	1	-	6.622456368458491	5.454692654466908	GGCCATAATTCAC
chr22	27719509	27719510	chr22:27719510:C:T	rs80220843	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr22	27847184	27847185	chr22:27847185:C:T	rs78516434	C	T	C	Hoxc9_MA0485.1	11	1	-	6.676551424872025	11.089084823740395	AGCAGTAAATCGC
chr22	28034963	28034964	chr22:28034964:A:T	rs73166782	A	T	A	Hoxc9_MA0485.1	8	1	+	7.130494017842785	0.228535507707824	GCTCATGAATCAA
chr22	28182100	28182101	chr22:28182101:C:T	rs28579300	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr22	28182339	28182340	chr22:28182340:G:C	rs73882704	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	28712706	28712707	chr22:28712707:G:A	rs17882704	G	A	G	Hoxc9_MA0485.1	0	1	+	6.851363537232404	6.318548403941402	GGGCATCAATTAC
chr22	28829777	28829778	chr22:28829778:T:C	chr22:28829778:T:C	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr22	28829785	28829786	chr22:28829786:T:C	rs78793185	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr22	29083890	29083891	chr22:29083891:G:A	rs76714669	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr22	29083895	29083896	chr22:29083896:G:T	rs134625	G	T	G	Hoxc9_MA0485.1	4	1	+	8.325945715588292	5.825094187263278	AGAAGTAAATCAA
chr22	29083901	29083902	chr22:29083902:C:A	rs134626	C	A	A	Hoxc9_MA0485.1	10	1	+	8.325945715588292	5.641945381714343	AGAAGTAAATCAA
chr22	29145054	29145055	chr22:29145055:G:A	rs115384160	G	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr22	29240691	29240692	chr22:29240692:G:A	rs7284720	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr22	29276127	29276128	chr22:29276128:T:C	rs17454495	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	29350263	29350264	chr22:29350264:T:C	rs737883	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr22	29428186	29428187	chr22:29428187:G:A	rs5752917	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr22	29435218	29435219	chr22:29435219:G:A	rs71329486	G	A	g	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr22	29478190	29478191	chr22:29478191:G:A	rs73156585	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	29524308	29524309	chr22:29524309:T:A	rs8140060	T	A	T	Hoxc9_MA0485.1	3	1	+	8.981644275584664	9.135145841036818	GATTATAAATCAG
chr22	29636245	29636246	chr22:29636246:A:G	rs3940296	A	G	A	Hoxc9_MA0485.1	12	1	-	11.360584314376672	11.614581268141224	AGTCATAAATCAT
chr22	29668127	29668128	chr22:29668128:C:T	rs2252472	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr22	29728624	29728625	chr22:29728625:A:T	rs140096	A	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	29733554	29733555	chr22:29733555:A:G	rs115982059	A	G	A	Hoxc9_MA0485.1	12	1	-	12.215053173163144	12.469050126927696	TGCCATAAATCAT
chr22	29807843	29807844	chr22:29807844:G:A	rs5752963	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr22	29807852	29807853	chr22:29807853:G:A	rs2079338	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr22	29871855	29871856	chr22:29871856:C:T	rs182121083	C	T	C	Hoxc9_MA0485.1	1	1	-	9.286825373922467	7.727381800012407	CGGCATAAATCAT
chr22	29871861	29871862	chr22:29871862:G:A	rs73394881	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	29892635	29892636	chr22:29892636:A:G	rs9625874	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	29914048	29914049	chr22:29914049:C:T	rs190265293	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr22	29938366	29938367	chr22:29938367:G:C	rs36593	G	C	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr22	29987626	29987627	chr22:29987627:A:C	rs9614127	A	C	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr22	30185732	30185733	chr22:30185733:C:T	rs5753037	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr22	30235861	30235862	chr22:30235862:G:A	rs141867990	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr22	30247619	30247620	chr22:30247620:C:G	rs2267153	C	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr22	30485663	30485664	chr22:30485664:A:G	rs9608938	A	G	G	Hoxc9_MA0485.1	9	1	-	7.213985100677544	0.32575928630391104	AGCCGTGAATCTG
chr22	30922756	30922757	chr22:30922757:C:T	rs7290078	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr22	31038716	31038717	chr22:31038717:G:T	rs12484162	G	T	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	31055977	31055978	chr22:31055978:G:C	rs5753446	G	C	C	Hoxc9_MA0485.1	4	1	+	8.07485957185598	4.1046966045979065	AGCCGTCAATCTG
chr22	31063207	31063208	chr22:31063208:A:G	rs7285683	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr22	31293718	31293719	chr22:31293719:T:A	rs5997948	T	A	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	31394302	31394303	chr22:31394303:G:A	rs2899164	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr22	31400576	31400577	chr22:31400577:C:T	rs11704156	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr22	31449335	31449336	chr22:31449336:A:T	chr22:31449336:A:T	A	T	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr22	31659456	31659457	chr22:31659457:T:C	rs16989374	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr22	31755717	31755718	chr22:31755718:T:C	rs5998115	T	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr22	31960162	31960163	chr22:31960163:T:G	rs9621371	T	G	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr22	31968409	31968410	chr22:31968410:C:G	rs62240611	C	G	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	31968413	31968414	chr22:31968414:A:T	rs62240612	A	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr22	31994996	31994997	chr22:31994997:G:C	rs16989768	G	C	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr22	32320621	32320622	chr22:32320622:C:T	rs62239276	C	T	c	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr22	32357817	32357818	chr22:32357818:C:T	rs111919643	C	T	-	Hoxc9_MA0485.1	31	0	+	0	0	.
chr22	32539934	32539935	chr22:32539935:G:A	rs79392563	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr22	32577083	32577084	chr22:32577084:A:G	rs13347218	A	G	A	Hoxc9_MA0485.1	3	1	+	7.254243428702986	2.4725981642877635	TCCAGTCAATCAC
chr22	32605963	32605964	chr22:32605964:C:T	rs9784225	C	T	C	Hoxc9_MA0485.1	12	1	-	7.58111318614114	7.45543282930767	TCCCATCAATCTG
chr22	32695605	32695606	chr22:32695606:C:T	rs5998588	C	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	32718020	32718021	chr22:32718021:C:T	rs111622042	C	T	C	Hoxc9_MA0485.1	1	1	-	7.710501841882708	6.151058267972647	CGCCTTAAATCTC
chr22	32725343	32725344	chr22:32725344:A:T	rs12484015	A	T	A	Hoxc9_MA0485.1	9	1	+	8.978716531178545	12.80635909967857	GGCCATAAAACAG
chr22	32764884	32764885	chr22:32764885:T:C	rs116896596	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr22	32800397	32800398	chr22:32800398:C:T	rs5749511	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr22	32851575	32851576	chr22:32851576:G:A	rs78954299	G	A	G	Hoxc9_MA0485.1	6	1	+	7.720233199826581	10.754438966336	GCTCATGAATCAT
chr22	32881563	32881564	chr22:32881564:C:T	rs241902	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	32904115	32904116	chr22:32904116:T:C	rs5754331	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr22	32904151	32904152	chr22:32904152:C:T	rs35640347	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr22	32986769	32986770	chr22:32986770:T:C	rs1365836	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr22	32986770	32986771	chr22:32986771:A:G	rs1365837	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr22	33124619	33124620	chr22:33124620:C:G	rs80064195	C	G	C	Hoxc9_MA0485.1	1	1	+	7.547396215584446	8.686356696916121	CCTCATCAATCAC
chr22	33273505	33273506	chr22:33273506:G:C	rs16992034	G	C	G	Hoxc9_MA0485.1	6	1	+	7.5778281001717245	8.438702571350161	TCCCATGAATCAG
chr22	33335573	33335574	chr22:33335574:A:T	rs540281541	A	T	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr22	33544220	33544221	chr22:33544221:A:G	rs929879157	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr22	33957444	33957445	chr22:33957445:T:C	rs5754769	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr22	34077645	34077646	chr22:34077646:G:A	rs17749103	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr22	34279912	34279913	chr22:34279913:T:G	rs713765	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr22	34544949	34544950	chr22:34544950:T:G	rs5755093	T	G	G	Hoxc9_MA0485.1	2	1	-	10.46276217940252	12.382165151806273	GGATATAAATCAT
chr22	34806278	34806279	chr22:34806279:T:C	rs1028344	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	34841374	34841375	chr22:34841375:A:G	rs715497	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	35017981	35017982	chr22:35017982:C:T	rs111638444	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr22	35018026	35018027	chr22:35018027:T:G	rs5750033	T	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr22	35638017	35638018	chr22:35638018:T:C	rs5999901	T	C	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr22	36178718	36178719	chr22:36178719:A:G	rs132681	A	G	g	Hoxc9_MA0485.1	20	0	-	0	0	.
chr22	36197593	36197594	chr22:36197594:A:T	rs6000178	A	T	a	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	36243928	36243929	chr22:36243929:G:A	rs2413394	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	36323314	36323315	chr22:36323315:G:A	rs12160045	G	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr22	36352352	36352353	chr22:36352353:C:T	rs76521655	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr22	36352357	36352358	chr22:36352358:C:T	rs11912903	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	36352361	36352362	chr22:36352362:C:T	rs75308339	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr22	36467187	36467188	chr22:36467188:A:G	rs537564819	A	G	A	Hoxc9_MA0485.1	8	1	+	9.958126148166242	3.0561676380312828	GCCCATCAATCAT
chr22	36613839	36613840	chr22:36613840:C:T	rs564540863	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr22	36628905	36628906	chr22:36628906:C:G	rs2283997	C	G	C	Hoxc9_MA0485.1	4	1	-	8.685036437982992	4.7148734707249185	ACCTGTAAATCTT
chr22	37157578	37157579	chr22:37157579:A:G	rs229483	A	G	G	Hoxc9_MA0485.1	12	1	-	7.5096600695104865	7.763657023275037	CACTGTAAATCTT
chr22	37171786	37171787	chr22:37171787:G:A	rs1034417	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr22	37318384	37318385	chr22:37318385:A:G	rs117472908	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr22	37401759	37401760	chr22:37401760:T:C	rs5750429	T	C	C	Hoxc9_MA0485.1	11	1	+	8.167105447354366	6.971704977664308	GGGCATAAATTTC
chr22	37432446	37432447	chr22:37432447:G:A	rs12157374	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr22	37449575	37449576	chr22:37449576:C:T	rs73414270	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr22	37608354	37608355	chr22:37608355:G:A	rs117906809	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr22	37943736	37943737	chr22:37943737:G:A	rs140720586	G	A	g	Hoxc9_MA0485.1	19	0	-	0	0	.
chr22	38069836	38069837	chr22:38069837:A:C	chr22:38069837:A:C	A	C	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr22	38700117	38700118	chr22:38700118:T:C	rs185814757	T	C	T	Hoxc9_MA0485.1	0	1	-	8.482275075906525	9.015090209197528	AAGCATAAATCAT
chr22	38760480	38760481	chr22:38760481:C:G	rs113652271	C	G	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr22	39096645	39096646	chr22:39096646:C:T	rs75842619	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr22	39109575	39109576	chr22:39109576:C:T	rs139339	C	T	N	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr22	39109603	39109604	chr22:39109604:T:G	rs139340	T	G	N	Hoxc9_MA0485.1	26	0	+	0	0	.
chr22	39111008	39111009	chr22:39111009:C:A	rs79477683	C	A	c	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr22	39117524	39117525	chr22:39117525:C:T	rs139358	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr22	39133127	39133128	chr22:39133128:G:A	rs4820369	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr22	39151195	39151196	chr22:39151196:G:A	rs139404	G	A	G	Hoxc9_MA0485.1	1	1	+	8.194678641887569	6.635235067977507	TGGAATAAATCAA
chr22	39157813	39157814	chr22:39157814:G:A	rs139414	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	39159259	39159260	chr22:39159260:G:A	rs994575740	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr22	39219311	39219312	chr22:39219312:C:G	rs2040399	C	G	G	Hoxc9_MA0485.1	3	1	+	7.177147603698301	1.66075113171261	CGCCGTGAATCTC
chr22	39255526	39255527	chr22:39255527:A:G	rs77416181	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr22	39522882	39522883	chr22:39522883:A:G	rs891360142	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr22	39643547	39643548	chr22:39643548:T:C	rs136822	T	C	C	Hoxc9_MA0485.1	4	1	-	7.05957376279225	5.891810048800665	GGGAATGAATCAC
chr22	39699556	39699557	chr22:39699557:G:T	rs12171155	G	T	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	39815014	39815015	chr22:39815015:G:A	rs75147514	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr22	39820546	39820547	chr22:39820547:T:C	rs73426191	T	C	T	Hoxc9_MA0485.1	8	1	-	8.791502533716802	1.8895440235818421	TCCAATAAATTAC
chr22	39860443	39860444	chr22:39860444:A:G	rs747021483	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr22	40004907	40004908	chr22:40004908:A:G	rs2958659	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr22	40153378	40153379	chr22:40153379:A:G	rs62236803	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr22	40387775	40387776	chr22:40387776:G:C	rs2294348	G	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr22	40499805	40499806	chr22:40499806:C:A	rs73167098	C	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr22	40661972	40661973	chr22:40661973:C:T	rs7284506	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr22	40701485	40701486	chr22:40701486:C:T	rs5995899	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr22	40728987	40728988	chr22:40728988:C:T	rs8136514	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	40728990	40728991	chr22:40728991:T:G	chr22:40728991:T:G	T	G	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr22	40756023	40756024	chr22:40756024:A:G	rs73172853	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr22	41048345	41048346	chr22:41048346:C:T	rs12628681	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	41048358	41048359	chr22:41048359:A:G	rs1474846	A	G	G	Hoxc9_MA0485.1	8	1	+	9.795876103281781	2.8939175931468246	GCCTATAAATCTA
chr22	41371481	41371482	chr22:41371482:T:C	rs9611565	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr22	41471783	41471784	chr22:41471784:A:G	chr22:41471784:A:G	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr22	41669627	41669628	chr22:41669628:C:T	rs111294906	C	T	C	Hoxc9_MA0485.1	2	1	+	7.170385085696694	5.793366608535469	GCCAATCAATCCT
chr22	41925752	41925753	chr22:41925753:G:C	rs55898132	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	42080410	42080411	chr22:42080411:G:A	rs73887920	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr22	42106065	42106066	chr22:42106066:A:G	rs9611734	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr22	42222662	42222663	chr22:42222663:A:G	rs5758657	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr22	42314362	42314363	chr22:42314363:G:A	rs139621215	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	42444718	42444719	chr22:42444719:C:T	rs183732093	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr22	42511612	42511613	chr22:42511613:T:C	rs12485160	T	C	T	Hoxc9_MA0485.1	4	1	-	8.137328736183363	6.969565022191779	GACCATAAAACAC
chr22	42573102	42573103	chr22:42573103:G:T	rs137050	G	T	g	Hoxc9_MA0485.1	12	1	-	8.137328736183363	7.293592600435015	GACCATAAAACAC
chr22	42573123	42573124	chr22:42573124:G:A	rs137051	G	A	a	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr22	42647947	42647948	chr22:42647948:T:A	rs2267459	T	A	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr22	42746941	42746942	chr22:42746942:C:T	rs8137312	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr22	42895269	42895270	chr22:42895270:A:G	rs8140775	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr22	42895272	42895273	chr22:42895273:C:G	rs374062800	C	G	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr22	43215534	43215535	chr22:43215535:C:T	rs59841981	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr22	43270794	43270795	chr22:43270795:G:A	rs116313121	G	A	G	Hoxc9_MA0485.1	2	1	+	7.170125252171702	7.946606421489256	GTGCATAAATCTG
chr22	43393627	43393628	chr22:43393628:G:T	rs1555243	G	T	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr22	43428564	43428565	chr22:43428565:T:C	rs135080	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr22	43434927	43434928	chr22:43434928:C:T	rs6519374	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr22	43456041	43456042	chr22:43456042:C:T	rs9620142	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr22	43456045	43456046	chr22:43456046:G:C	rs573556314	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr22	43650383	43650384	chr22:43650384:G:A	rs2187767	G	A	g	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	43750417	43750418	chr22:43750418:G:A	rs76513336	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr22	44032134	44032135	chr22:44032135:G:A	rs713747	G	A	g	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr22	44129333	44129334	chr22:44129334:G:A	rs9614344	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr22	44224307	44224308	chr22:44224308:C:T	rs182950992	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	44281902	44281903	chr22:44281903:C:A	rs113605266	C	A	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr22	44446473	44446474	chr22:44446474:A:C	rs133795	A	C	C	Hoxc9_MA0485.1	9	1	-	11.03581006245865	4.147584248085019	GGTCATAAATCTT
chr22	44529216	44529217	chr22:44529217:T:C	rs56019371	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr22	44549285	44549286	chr22:44549286:C:G	rs2205962	C	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	44569859	44569860	chr22:44569860:G:T	rs138594	G	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr22	44642003	44642004	chr22:44642004:C:T	rs12628706	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr22	44787088	44787089	chr22:44787089:A:C	rs7289667	A	C	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr22	44860298	44860299	chr22:44860299:C:G	rs3830108	C	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr22	44918365	44918366	chr22:44918366:C:T	rs9614981	C	T	C	Hoxc9_MA0485.1	3	1	+	6.432070975883819	5.5438182028611935	TGGCGTCAATCAC
chr22	45043082	45043083	chr22:45043083:A:G	rs1034230603	A	G	a	Hoxc9_MA0485.1	2	1	-	7.962962001599675	9.339980478760896	CGTCATAAATCCA
chr22	45052888	45052889	chr22:45052889:C:T	rs910307	C	T	t	Hoxc9_MA0485.1	20	0	-	0	0	.
chr22	45053228	45053229	chr22:45053229:C:T	rs761493	C	T	c	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr22	45053232	45053233	chr22:45053233:T:A	rs5766374	T	A	t	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr22	45166784	45166785	chr22:45166785:C:G	rs4140644	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr22	45170205	45170206	chr22:45170206:C:T	rs9626290	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	45236327	45236328	chr22:45236328:C:G	rs73436118	C	G	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr22	45329224	45329225	chr22:45329225:T:C	rs6006988	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr22	45709376	45709377	chr22:45709377:G:C	rs2283665	G	C	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr22	45994362	45994363	chr22:45994363:C:T	rs28496879	C	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr22	46241078	46241079	chr22:46241079:G:A	rs41378347	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr22	46251946	46251947	chr22:46251947:G:A	rs78023664	G	A	G	Hoxc9_MA0485.1	10	1	-	9.797253085752335	7.993417181443584	ATCCATAAATCTT
chr22	46334759	46334760	chr22:46334760:G:T	rs115131981	G	T	G	Hoxc9_MA0485.1	1	1	+	12.147863609554099	10.06510328897756	AGCCATAAATCAA
chr22	46514865	46514866	chr22:46514866:G:A	rs77068715	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	46514899	46514900	chr22:46514900:G:A	rs777620789	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr22	46614017	46614018	chr22:46614018:G:A	rs138499	G	A	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr22	46662049	46662050	chr22:46662050:C:G	rs560582415	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr22	46728065	46728066	chr22:46728066:T:C	rs73180696	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr22	46739365	46739366	chr22:46739366:A:C	rs1053339657	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr22	46957829	46957830	chr22:46957830:C:T	rs78591809	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr22	47105007	47105008	chr22:47105008:C:T	rs5766674	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr22	47189920	47189921	chr22:47189921:C:T	rs5767569	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr22	47197662	47197663	chr22:47197663:A:G	rs9626698	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr22	47292476	47292477	chr22:47292477:T:C	rs9626993	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr22	47292494	47292495	chr22:47292495:A:C	rs17223061	A	C	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr22	47296549	47296550	chr22:47296550:C:T	rs117442528	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr22	47296551	47296552	chr22:47296552:A:G	rs112469157	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr22	47296680	47296681	chr22:47296681:T:A	rs113384049	T	A	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr22	47305960	47305961	chr22:47305961:T:C	rs4823630	T	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr22	47352412	47352413	chr22:47352413:G:C	rs146182400	G	C	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr22	47352448	47352449	chr22:47352449:C:T	rs6008148	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr22	47389947	47389948	chr22:47389948:G:A	rs11704379	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr22	47548998	47548999	chr22:47548999:T:C	rs10460765	T	C	T	Hoxc9_MA0485.1	8	1	-	6.964412562030993	0.06245405189603204	GGCCTTCAATCAG
chr22	47564544	47564545	chr22:47564545:T:A	rs548199153	T	A	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr22	47763654	47763655	chr22:47763655:T:G	rs6007742	T	G	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr22	47841704	47841705	chr22:47841705:C:G	rs5768061	C	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr22	47918640	47918641	chr22:47918641:C:T	rs9615679	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr22	48103824	48103825	chr22:48103825:C:T	rs35546688	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr22	48112882	48112883	chr22:48112883:T:C	rs80251587	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr22	48125967	48125968	chr22:48125968:C:T	rs1986290	C	T	c	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr22	48254736	48254737	chr22:48254737:T:C	rs79765539	T	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr22	48269341	48269342	chr22:48269342:G:C	rs9627282	G	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr22	48279054	48279055	chr22:48279055:T:C	rs133600	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	48288474	48288475	chr22:48288475:G:C	rs470000	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr22	48406005	48406006	chr22:48406006:G:A	rs130805	G	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr22	48446523	48446524	chr22:48446524:G:A	rs9615322	G	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr22	48478106	48478107	chr22:48478107:T:C	rs5768657	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr22	48566904	48566905	chr22:48566905:C:A	rs6008760	C	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr22	48691023	48691024	chr22:48691024:G:C	rs73435879	G	C	C	Hoxc9_MA0485.1	1	1	+	8.03802207487674	6.899061593545064	CGCCGTCAATCTC
chr22	48939944	48939945	chr22:48939945:A:G	rs78487674	A	G	a	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr22	48939945	48939946	chr22:48939946:A:C	rs75838299	A	C	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr22	48962097	48962098	chr22:48962098:A:G	rs62221240	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr22	49053474	49053475	chr22:49053475:C:G	rs4823983	C	G	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr22	49082595	49082596	chr22:49082596:A:G	rs5769880	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr22	49137612	49137613	chr22:49137613:G:T	rs9627870	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr22	49220816	49220817	chr22:49220817:C:T	rs5770058	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr22	49237840	49237841	chr22:49237841:G:A	rs2318952	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr22	49237842	49237843	chr22:49237843:G:A	rs4260335	G	A	-	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr22	49238841	49238842	chr22:49238842:T:A	rs76139376	T	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr22	49252102	49252103	chr22:49252103:A:C	rs768378735	A	C	A	Hoxc9_MA0485.1	11	1	-	8.14508234679153	4.590138333132184	CCTCATAAATCTG
chr22	49252129	49252130	chr22:49252130:T:C	rs2688135	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr22	49258801	49258802	chr22:49258802:C:G	rs2187770	C	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr22	49284833	49284834	chr22:49284834:T:C	rs6009204	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr22	49298723	49298724	chr22:49298724:C:G	rs73437132	C	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr22	49363306	49363307	chr22:49363307:T:C	rs2007314	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr22	49392936	49392937	chr22:49392937:C:A	rs9616598	C	A	c	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr22	49415353	49415354	chr22:49415354:C:A	rs17181008	C	A	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr22	49415357	49415358	chr22:49415358:C:A	rs8138494	C	A	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr22	49440030	49440031	chr22:49440031:G:A	rs6009690	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr22	49584249	49584250	chr22:49584250:C:T	chr22:49584250:C:T	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr22	49615769	49615770	chr22:49615770:G:T	rs4441587	G	T	-	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr22	49751553	49751554	chr22:49751554:C:G	rs139824	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr22	49764121	49764122	chr22:49764122:A:T	rs7287498	A	T	a	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr22	49926319	49926320	chr22:49926320:G:A	rs80330007	G	A	G	Hoxc9_MA0485.1	12	1	+	10.029366742065793	9.903686385232323	GGACATAAATCTG
chr22	50044530	50044531	chr22:50044531:C:T	rs80101768	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr22	50534656	50534657	chr22:50534657:G:A	rs547350430	G	A	g	Hoxc9_MA0485.1	17	0	+	0	0	.
chr22	50544566	50544567	chr22:50544567:C:T	rs147445764	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr22	50605525	50605526	chr22:50605526:C:T	rs189581121	C	T	C	Hoxc9_MA0485.1	12	1	+	6.5708864404617415	6.316889486697191	GACCGTCAATCCC
chr3	63187	63188	chr3:63188:A:G	rs73094849	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	194224	194225	chr3:194225:A:G	rs114977520	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	945841	945842	chr3:945842:C:A	rs145892834	C	A	C	Hoxc9_MA0485.1	1	1	+	9.235015389519921	8.814532296941533	TCTCATAAATCAG
chr3	1208625	1208626	chr3:1208626:C:T	rs10510165	C	T	C	Hoxc9_MA0485.1	4	1	-	9.741842839026052	10.909606553017635	TACCGTAAATCAC
chr3	1275604	1275605	chr3:1275605:T:C	rs12374025	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	1447195	1447196	chr3:1447196:T:C	rs12487806	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	1702065	1702066	chr3:1702066:T:A	rs4266172	T	A	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	1750420	1750421	chr3:1750421:G:A	rs6797639	G	A	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	2107706	2107707	chr3:2107707:G:C	rs9866993	G	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	2375806	2375807	chr3:2375807:A:G	rs3856839	A	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	2375836	2375837	chr3:2375837:C:T	rs17013467	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	2384404	2384405	chr3:2384405:G:A	rs11926996	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	2384419	2384420	chr3:2384420:G:A	rs3856841	G	A	A	Hoxc9_MA0485.1	12	1	+	7.695005791044063	7.569325434210593	GCACATAAATCCG
chr3	2512612	2512613	chr3:2512613:G:T	rs9858503	G	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	2559119	2559120	chr3:2559120:A:G	rs2046037	A	G	A	Hoxc9_MA0485.1	4	1	+	8.54621976323897	7.378456049247386	GACAATAAATAAC
chr3	2661337	2661338	chr3:2661338:C:T	rs9838109	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr3	2661343	2661344	chr3:2661344:A:G	rs59862732	A	G	A	Hoxc9_MA0485.1	9	1	-	8.989436452322154	2.101210637948521	ATACATAAATCAC
chr3	2878183	2878184	chr3:2878184:G:A	rs4446191	G	A	a	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	2910990	2910991	chr3:2910991:C:T	rs56234939	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	2993953	2993954	chr3:2993954:A:T	rs1499127	A	T	A	Hoxc9_MA0485.1	1	1	+	9.599204666187145	9.075887919520667	GATAATAAATCAT
chr3	3192340	3192341	chr3:3192341:T:G	rs4109079	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	3211165	3211166	chr3:3211166:T:A	rs12636285	T	A	t	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	3439056	3439057	chr3:3439057:T:C	rs9819413	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	3456608	3456609	chr3:3456609:A:T	rs6789476	A	T	T	Hoxc9_MA0485.1	9	1	-	8.000128542430456	4.172485973930431	GCCCATAAATATA
chr3	3484718	3484719	chr3:3484719:A:C	rs9871836	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	3634236	3634237	chr3:3634237:G:C	rs1997437	G	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	3649212	3649213	chr3:3649213:T:C	rs17034952	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	4052054	4052055	chr3:4052055:G:C	rs167599	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	4504075	4504076	chr3:4504076:C:T	rs304028	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	4504362	4504363	chr3:4504363:T:G	rs304030	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	4529986	4529987	chr3:4529987:T:G	rs6796205	T	G	G	Hoxc9_MA0485.1	5	1	+	8.370276086834632	1.47173311111504	CACCATAAATCCT
chr3	4985547	4985548	chr3:4985548:A:T	rs983596127	A	T	A	Hoxc9_MA0485.1	5	1	-	8.315988385060395	1.4174454093408004	TCCAGTAAATCTT
chr3	4985564	4985565	chr3:4985565:T:C	rs146851518	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr3	5189010	5189011	chr3:5189011:T:C	rs929582842	T	C	T	Hoxc9_MA0485.1	9	1	+	8.500411930095208	1.6121861157215758	GTCTATAAATCCC
chr3	5189011	5189012	chr3:5189012:C:T	rs78613621	C	T	C	Hoxc9_MA0485.1	10	1	+	8.500411930095208	6.696576025786456	GTCTATAAATCCC
chr3	5197923	5197924	chr3:5197924:A:G	rs146737754	A	G	A	Hoxc9_MA0485.1	8	1	+	8.180809698652832	1.278851188517872	AGACATCAATCAG
chr3	5630827	5630828	chr3:5630828:C:T	rs1820921	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	5673708	5673709	chr3:5673709:G:A	rs17043295	G	A	G	Hoxc9_MA0485.1	4	1	+	9.558564781127018	10.7263284951186	AGTTGTAAATCAC
chr3	5720680	5720681	chr3:5720681:C:G	rs78942055	C	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	5720696	5720697	chr3:5720697:C:T	rs148829206	C	T	C	Hoxc9_MA0485.1	0	1	-	8.466280943699148	7.933465810408145	GCCTATCAATCTC
chr3	5797714	5797715	chr3:5797715:T:C	rs6784744	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	5797716	5797717	chr3:5797717:A:G	rs6782097	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	5823110	5823111	chr3:5823111:A:G	rs1030778	A	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	5903132	5903133	chr3:5903133:C:T	rs9757101	C	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	6048124	6048125	chr3:6048125:G:C	rs115951301	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	6078563	6078564	chr3:6078564:G:C	rs908606	G	C	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	6085129	6085130	chr3:6085130:G:A	rs6443021	G	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	6155511	6155512	chr3:6155512:A:C	rs7624103	A	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	6388484	6388485	chr3:6388485:A:G	rs280481	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	6725211	6725212	chr3:6725212:T:G	rs345246	T	G	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	7237702	7237703	chr3:7237703:T:C	rs2013646	T	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	7309685	7309686	chr3:7309686:C:T	rs984123	C	T	C	Hoxc9_MA0485.1	1	1	-	11.214018506899079	9.654574932989018	GGCAATAAATCTG
chr3	7440166	7440167	chr3:7440167:T:C	rs17717959	T	C	C	Hoxc9_MA0485.1	11	1	-	10.083448611563671	5.670915212695303	AGAAATAAATCAT
chr3	7543758	7543759	chr3:7543759:G:A	rs73019809	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	7682056	7682057	chr3:7682057:T:C	rs162801	T	C	C	Hoxc9_MA0485.1	0	1	-	8.880777032330062	9.413592165621063	AGCCATAAATTCT
chr3	7841752	7841753	chr3:7841753:T:G	rs1386981	T	G	G	Hoxc9_MA0485.1	0	1	-	8.256068457835656	7.501175181941537	AGCCATGAATCTA
chr3	7841765	7841766	chr3:7841766:A:G	rs1386982	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	7924449	7924450	chr3:7924450:G:T	rs6803927	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	7962611	7962612	chr3:7962612:C:T	rs77170366	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	8141226	8141227	chr3:8141227:T:C	rs11715664	T	C	T	Hoxc9_MA0485.1	0	1	+	7.521646565667628	7.289302908148261	TGCTGTCAATCAG
chr3	8207655	8207656	chr3:8207656:G:C	rs114150398	G	C	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	8207670	8207671	chr3:8207671:C:T	rs77898787	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	8532346	8532347	chr3:8532347:G:C	rs149634938	G	C	g	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	8539105	8539106	chr3:8539106:A:G	rs116236820	A	G	a	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	8965471	8965472	chr3:8965472:G:A	rs12107610	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	9141437	9141438	chr3:9141438:T:C	rs11720620	T	C	t	Hoxc9_MA0485.1	4	1	-	9.512753198988632	8.344989484997047	AAACATAAATCAC
chr3	9280513	9280514	chr3:9280514:C:T	rs138888242	C	T	C	Hoxc9_MA0485.1	0	1	+	8.175687658373155	8.408031315892522	CGTCATAAATAAC
chr3	9298571	9298572	chr3:9298572:T:C	rs11925343	T	C	C	Hoxc9_MA0485.1	0	1	+	9.274703467377583	9.042359809858215	TTCCATAAATCTT
chr3	9716069	9716070	chr3:9716070:G:A	rs708571	G	A	G	Hoxc9_MA0485.1	0	1	+	10.985827766714229	10.453012633423226	GGCAATAAATTAC
chr3	9716075	9716076	chr3:9716076:A:G	rs188708955	A	G	A	Hoxc9_MA0485.1	6	1	+	10.985827766714229	7.951622000204808	GGCAATAAATTAC
chr3	10140877	10140878	chr3:10140878:G:A	rs779803	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	10510873	10510874	chr3:10510874:C:A	rs6780421	C	A	C	Hoxc9_MA0485.1	6	1	+	7.905136293267162	10.078467588598143	GCCCATCAATCCT
chr3	10646972	10646973	chr3:10646973:C:T	rs17033278	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	10652188	10652189	chr3:10652189:T:C	rs9834205	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	10656354	10656355	chr3:10656355:C:T	rs6796304	C	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	10656357	10656358	chr3:10656358:G:A	rs6796464	G	A	g	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	10722553	10722554	chr3:10722554:A:G	rs6776426	A	G	A	Hoxc9_MA0485.1	5	1	-	8.041276092358688	3.5559647297202	AGACATCAATCTC
chr3	10804820	10804821	chr3:10804821:A:G	rs188316492	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	10861176	10861177	chr3:10861177:G:T	rs4684739	G	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	10900046	10900047	chr3:10900047:T:C	rs73121707	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	10934058	10934059	chr3:10934059:C:T	rs2272399	C	T	C	Hoxc9_MA0485.1	1	1	-	8.088015341201672	6.52857176729161	CGGAATAAATCAG
chr3	10994871	10994872	chr3:10994872:C:A	rs2675159	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	10994875	10994876	chr3:10994876:G:A	rs2601125	G	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	11130673	11130674	chr3:11130674:T:G	rs67267705	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	11226334	11226335	chr3:11226335:C:A	rs347607	C	A	A	Hoxc9_MA0485.1	3	1	+	9.668234027436279	8.93348281986581	TTCCATAAATCAG
chr3	11391432	11391433	chr3:11391433:C:T	chr3:11391433:C:T	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	11600593	11600594	chr3:11600594:G:A	chr3:11600594:G:A	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr3	11641475	11641476	chr3:11641476:G:A	rs7621621	G	A	A	Hoxc9_MA0485.1	12	1	-	10.82853073687214	10.574533783107588	GGGCATAAATCAC
chr3	11915264	11915265	chr3:11915265:A:G	rs925064	A	G	a	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	11919604	11919605	chr3:11919605:C:T	chr3:11919605:C:T	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	11955836	11955837	chr3:11955837:C:T	rs177600	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	12194144	12194145	chr3:12194145:C:T	rs114938103	C	T	C	Hoxc9_MA0485.1	0	1	+	9.321284226126	9.553627883645369	CGCCATAAATTTT
chr3	12450562	12450563	chr3:12450563:G:A	rs73027292	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	12471349	12471350	chr3:12471350:G:T	rs143584161	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	13064801	13064802	chr3:13064802:T:C	rs360875	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	13154405	13154406	chr3:13154406:T:C	rs357163	T	C	t	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	13207976	13207977	chr3:13207977:T:C	rs78611923	T	C	t	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	13280351	13280352	chr3:13280352:A:G	rs357116	A	G	A	Hoxc9_MA0485.1	0	1	+	10.295715603581138	10.82853073687214	AGGCATAAATCAC
chr3	13292616	13292617	chr3:13292617:G:A	rs7636814	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	13292624	13292625	chr3:13292625:A:G	rs73016868	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	13579644	13579645	chr3:13579645:C:T	rs76609561	C	T	C	Hoxc9_MA0485.1	0	1	-	7.523441014762441	6.990625881471439	GGCCATCAAACAC
chr3	13624425	13624426	chr3:13624426:C:G	rs6795255	C	G	C	Hoxc9_MA0485.1	1	1	+	9.611382131332691	10.750342612664364	GCCTGTAAATCAG
chr3	13647785	13647786	chr3:13647786:G:A	rs566237813	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	13777274	13777275	chr3:13777275:T:C	rs529205074	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	14171072	14171073	chr3:14171073:C:G	rs3731076	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	14202215	14202216	chr3:14202216:C:T	rs144728093	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	14247371	14247372	chr3:14247372:G:A	chr3:14247372:G:A	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	14404034	14404035	chr3:14404035:G:A	rs80120927	G	A	g	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	14511485	14511486	chr3:14511486:A:G	rs4685168	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	14549838	14549839	chr3:14549839:C:A	rs9310449	C	A	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	14588656	14588657	chr3:14588657:G:A	rs17039877	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	14778144	14778145	chr3:14778145:A:G	rs13072398	A	G	A	Hoxc9_MA0485.1	4	1	+	9.654574932989018	8.486811218997435	GACAATAAATCTG
chr3	14837913	14837914	chr3:14837914:C:T	rs1687300	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	15205606	15205607	chr3:15205607:C:T	rs143147141	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	15316918	15316919	chr3:15316919:C:G	rs77826234	C	G	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	15326170	15326171	chr3:15326171:A:G	rs60333681	A	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	15331422	15331423	chr3:15331423:T:A	rs73816882	T	A	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	15331423	15331424	chr3:15331424:A:T	rs3773463	A	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr3	15361539	15361540	chr3:15361540:C:G	rs116469683	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	15635363	15635364	chr3:15635364:G:A	rs561203711	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	15647610	15647611	chr3:15647611:G:A	rs2470531	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	15647639	15647640	chr3:15647640:A:G	rs191407092	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	16264166	16264167	chr3:16264167:C:G	rs14080	C	G	C	Hoxc9_MA0485.1	10	1	+	11.092031649766472	6.290960842019193	TGTCATAAATCAC
chr3	16315882	16315883	chr3:16315883:G:A	rs145056599	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	16318453	16318454	chr3:16318454:T:C	rs493626	T	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	16318485	16318486	chr3:16318486:G:A	rs55977707	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	16418339	16418340	chr3:16418340:A:G	rs71310345	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	16738493	16738494	chr3:16738494:A:G	rs189226010	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	16809530	16809531	chr3:16809531:A:G	rs17042757	A	G	G	Hoxc9_MA0485.1	5	1	-	9.855799636276855	5.370488273638366	GGCCTTAAATCAC
chr3	17129788	17129789	chr3:17129789:A:T	rs11716032	A	T	T	Hoxc9_MA0485.1	2	1	-	10.770845132392875	10.228460637150343	AGTCATAAATCAA
chr3	17774591	17774592	chr3:17774592:C:T	rs141360575	C	T	c	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	18065980	18065981	chr3:18065981:T:C	rs34500886	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	18229984	18229985	chr3:18229985:A:G	rs73173584	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	18264503	18264504	chr3:18264504:G:A	rs9865306	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	18439981	18439982	chr3:18439982:C:T	rs115797892	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	18642374	18642375	chr3:18642375:G:A	rs7638475	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	18716190	18716191	chr3:18716191:T:A	rs67385647	T	A	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	18767739	18767740	chr3:18767740:A:T	rs9835075	A	T	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	18858955	18858956	chr3:18858956:C:T	rs1367746009	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	18858981	18858982	chr3:18858982:G:A	rs79350358	G	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	19946311	19946312	chr3:19946312:T:C	rs17006416	T	C	T	Hoxc9_MA0485.1	12	1	-	8.47936446143675	8.60504481827022	CGCTGTAAATCTA
chr3	20649548	20649549	chr3:20649549:C:T	rs145700339	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	21314913	21314914	chr3:21314914:G:A	rs1396003	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	21920225	21920226	chr3:21920226:C:T	rs35338441	C	T	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	21989965	21989966	chr3:21989966:C:T	rs34995962	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	22106214	22106215	chr3:22106215:T:C	rs779183	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	22245294	22245295	chr3:22245295:C:A	rs76992372	C	A	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	22245297	22245298	chr3:22245298:C:T	rs17011094	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	22510098	22510099	chr3:22510099:C:T	rs4527405	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	22691461	22691462	chr3:22691462:G:T	rs9834251	G	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	23113809	23113810	chr3:23113810:A:G	rs74656729	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	23271402	23271403	chr3:23271403:C:T	rs56073726	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	23271421	23271422	chr3:23271422:A:T	rs35266274	A	T	A	Hoxc9_MA0485.1	0	1	-	10.622712580383652	11.145262198758402	TGCAATAAATCTT
chr3	23277661	23277662	chr3:23277662:C:T	rs5023615	C	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	24229478	24229479	chr3:24229479:C:A	rs4858593	C	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	24258013	24258014	chr3:24258014:C:T	rs1667746	C	T	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	24368675	24368676	chr3:24368676:G:A	rs116023247	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	24439048	24439049	chr3:24439049:A:G	rs11714673	A	G	A	Hoxc9_MA0485.1	8	1	+	8.772514249857934	1.8705557397229733	GGGTGTAAATCAC
chr3	24439064	24439065	chr3:24439065:T:G	rs62255440	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	24484093	24484094	chr3:24484094:C:A	rs79456209	C	A	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	24682494	24682495	chr3:24682495:G:A	rs7640992	G	A	G	Hoxc9_MA0485.1	0	1	+	8.276448055348489	7.743632922057486	GCCTGTAAATCCC
chr3	24740153	24740154	chr3:24740154:G:C	rs7616736	G	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	24910100	24910101	chr3:24910101:T:C	rs35357706	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	25069636	25069637	chr3:25069637:C:A	rs17015753	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	25400559	25400560	chr3:25400560:A:C	rs2116702	A	C	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	25499879	25499880	chr3:25499880:A:G	rs1406575	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	25506713	25506714	chr3:25506714:A:G	rs1286644	A	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	25537710	25537711	chr3:25537711:C:G	rs1286773	C	G	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	25817958	25817959	chr3:25817959:C:T	rs62236903	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	26065937	26065938	chr3:26065938:A:G	rs74427297	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	26622420	26622421	chr3:26622421:C:G	rs74557845	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	26844152	26844153	chr3:26844153:A:C	rs13089253	A	C	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	27080154	27080155	chr3:27080155:A:G	rs73147091	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	27467467	27467468	chr3:27467468:C:G	rs1021498	C	G	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	27524228	27524229	chr3:27524229:G:A	rs57757081	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	27539412	27539413	chr3:27539413:C:T	rs2642916	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	27883378	27883379	chr3:27883379:G:T	rs73822129	G	T	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	27977089	27977090	chr3:27977090:T:C	rs17020711	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	28174432	28174433	chr3:28174433:C:T	rs35493553	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	28883789	28883790	chr3:28883790:C:T	rs73057993	C	T	C	Hoxc9_MA0485.1	0	1	+	8.46028723675802	8.69263089427739	CCACATAAATCAG
chr3	28883790	28883791	chr3:28883791:C:A	rs7622848	C	A	C	Hoxc9_MA0485.1	1	1	+	8.46028723675802	8.039804144179634	CCACATAAATCAG
chr3	28947258	28947259	chr3:28947259:T:C	rs1500016	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	29140842	29140843	chr3:29140843:A:G	rs79287249	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	29189454	29189455	chr3:29189455:A:C	rs4467405	A	C	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	29249840	29249841	chr3:29249841:G:A	rs10490854	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	29307687	29307688	chr3:29307688:A:G	rs2217937	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	29561860	29561861	chr3:29561861:A:G	rs142875901	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	29773803	29773804	chr3:29773804:C:T	rs78981226	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	29958495	29958496	chr3:29958496:C:T	rs12488255	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	30357332	30357333	chr3:30357333:G:A	rs74721390	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	30448807	30448808	chr3:30448808:T:C	rs4552399	T	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	30742003	30742004	chr3:30742004:T:C	rs117374946	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	30984956	30984957	chr3:30984957:A:C	rs888835255	A	C	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	31002693	31002694	chr3:31002694:G:A	rs4642168	G	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	31203082	31203083	chr3:31203083:G:A	rs76895278	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	31288693	31288694	chr3:31288694:G:A	rs13322356	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	31488652	31488653	chr3:31488653:T:G	rs139705067	T	G	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	31836546	31836547	chr3:31836547:T:C	rs4566577	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	32041296	32041297	chr3:32041297:C:T	rs901089	C	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	32145404	32145405	chr3:32145405:A:G	rs11129496	A	G	G	Hoxc9_MA0485.1	4	1	+	10.737061218156724	9.56929750416514	TGCTATAAATCAA
chr3	32240551	32240552	chr3:32240552:T:C	rs4504192	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	32500060	32500061	chr3:32500061:G:A	rs17029617	G	A	G	Hoxc9_MA0485.1	10	1	-	10.741052924997199	8.937217020688447	ACCCATAAATCTT
chr3	32574176	32574177	chr3:32574177:T:G	rs3853720	T	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	32945318	32945319	chr3:32945319:C:T	rs78553800	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	32974316	32974317	chr3:32974317:G:C	rs76690753	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	33097403	33097404	chr3:33097404:A:T	chr3:33097404:A:T	A	T	a	Hoxc9_MA0485.1	11	1	+	8.316809185915721	7.4592198007067	GGACATGAATCAT
chr3	33097410	33097411	chr3:33097411:C:T	rs148730537	C	T	c	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	33097412	33097413	chr3:33097413:C:T	rs755522884	C	T	c	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	33255480	33255481	chr3:33255481:T:C	rs56315731	T	C	T	Hoxc9_MA0485.1	8	1	-	8.82171858343077	1.9197600732958089	ACCCATCAATCTC
chr3	33278713	33278714	chr3:33278714:A:G	rs939776284	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	33363671	33363672	chr3:33363672:G:A	rs55697420	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	33372850	33372851	chr3:33372851:T:G	rs73828177	T	G	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	33439421	33439422	chr3:33439422:T:C	chr3:33439422:T:C	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	33440659	33440660	chr3:33440660:G:A	rs58665640	G	A	G	Hoxc9_MA0485.1	2	1	-	7.902109661152035	6.525091183990811	GCCTGTCAATCAT
chr3	33860861	33860862	chr3:33860862:G:A	rs9822671	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	34205535	34205536	chr3:34205536:G:A	rs140038646	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	34219875	34219876	chr3:34219876:A:G	rs4459843	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	34682753	34682754	chr3:34682754:A:G	rs1607773	A	G	A	Hoxc9_MA0485.1	10	1	+	8.219843844242568	6.102773370369241	GGCAGTAAATAAG
chr3	34682772	34682773	chr3:34682773:A:G	rs1851058	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	34793093	34793094	chr3:34793094:G:A	rs44338	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	34801948	34801949	chr3:34801949:G:T	rs56021155	G	T	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	34801949	34801950	chr3:34801950:A:G	rs56020763	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	34998220	34998221	chr3:34998221:A:G	rs73825403	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	35641943	35641944	chr3:35641944:G:A	rs4678788	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	35682763	35682764	chr3:35682764:T:C	rs1513475	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	35733220	35733221	chr3:35733221:G:A	rs2037015	G	A	A	Hoxc9_MA0485.1	10	1	-	9.438129446387691	7.634293542078939	TGCCATCAATCTC
chr3	36004711	36004712	chr3:36004712:G:T	rs11129683	G	T	g	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	36606875	36606876	chr3:36606876:C:T	rs17195741	C	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	37257722	37257723	chr3:37257723:C:T	rs17036169	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	37321676	37321677	chr3:37321677:C:T	rs80098730	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	37321698	37321699	chr3:37321699:G:A	rs13327269	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	37737044	37737045	chr3:37737045:G:A	rs76724945	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	37768236	37768237	chr3:37768237:A:G	rs11921296	A	G	A	Hoxc9_MA0485.1	11	1	+	8.143953451118414	3.7314200522500456	AACCATGAATCAT
chr3	37820504	37820505	chr3:37820505:C:T	rs35309407	C	T	T	Hoxc9_MA0485.1	4	1	-	6.788193213742329	7.955956927733914	GGCCGTAACTCAG
chr3	38043888	38043889	chr3:38043889:A:C	rs9311178	A	C	a	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	38098382	38098383	chr3:38098383:G:A	rs6790536	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	38797897	38797898	chr3:38797898:C:T	rs13075748	C	T	C	Hoxc9_MA0485.1	12	1	+	8.856616698118554	8.602619744354001	TACCATAAATCCC
chr3	39176810	39176811	chr3:39176811:T:C	rs184354580	T	C	T	Hoxc9_MA0485.1	4	1	-	8.243965323608077	7.076201609616494	GGCAATAAAACAG
chr3	39276615	39276616	chr3:39276616:A:G	rs2965058	A	G	A	Hoxc9_MA0485.1	9	1	-	12.535666717258428	5.647440902884797	GGCAATAAATCAT
chr3	39413823	39413824	chr3:39413824:G:A	rs12638378	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	39489577	39489578	chr3:39489578:C:A	rs77309543	C	A	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	39528221	39528222	chr3:39528222:C:T	rs816520	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	39531661	39531662	chr3:39531662:C:A	rs1708056	C	A	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	39531671	39531672	chr3:39531672:G:A	rs1708055	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	39812732	39812733	chr3:39812733:A:G	rs12635275	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	40079972	40079973	chr3:40079973:T:C	rs532670807	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	40130330	40130331	chr3:40130331:T:G	rs76750610	T	G	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	40208024	40208025	chr3:40208025:T:C	rs533172719	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	40315066	40315067	chr3:40315067:A:C	rs56331709	A	C	A	Hoxc9_MA0485.1	0	1	+	11.134583485055895	10.379690209161776	ACCCATAAATCAG
chr3	41039564	41039565	chr3:41039565:T:G	rs380628	T	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	41039565	41039566	chr3:41039566:T:C	rs380616	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	41159161	41159162	chr3:41159162:G:C	rs192868086	G	C	G	Hoxc9_MA0485.1	5	1	-	7.7297418105246605	5.316510197443551	TGCCACAAATCAT
chr3	41200418	41200419	chr3:41200419:T:C	rs78048770	T	C	T	Hoxc9_MA0485.1	12	1	-	8.012880562370205	8.138560919203675	TACCATAAATCCA
chr3	41331800	41331801	chr3:41331801:C:T	rs58829924	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	41339305	41339306	chr3:41339306:G:A	rs561892055	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	41486333	41486334	chr3:41486334:T:C	rs9865608	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	41486362	41486363	chr3:41486363:T:A	rs9865628	T	A	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	41565078	41565079	chr3:41565079:C:T	rs60094379	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	41933606	41933607	chr3:41933607:A:T	rs1716651	A	T	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	42046544	42046545	chr3:42046545:A:G	rs139998790	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	42247402	42247403	chr3:42247403:T:C	rs1449363	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	42747421	42747422	chr3:42747422:G:C	rs12490743	G	C	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr3	42762463	42762464	chr3:42762464:A:G	rs339669	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	42855146	42855147	chr3:42855147:A:G	rs9815043	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	42865619	42865620	chr3:42865620:A:C	rs2228468	A	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	43195174	43195175	chr3:43195175:C:T	rs13433894	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	43865793	43865794	chr3:43865794:G:A	rs779382693	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	43871325	43871326	chr3:43871326:G:A	rs113277830	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	43998402	43998403	chr3:43998403:T:C	rs142584718	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	44106797	44106798	chr3:44106798:G:A	rs57624968	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	45135969	45135970	chr3:45135970:C:T	rs7611004	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	45135993	45135994	chr3:45135994:C:G	rs62244466	C	G	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	45209733	45209734	chr3:45209734:C:A	rs78172658	C	A	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	45307717	45307718	chr3:45307718:C:T	rs62242409	C	T	C	Hoxc9_MA0485.1	2	1	+	10.189700073962538	8.812681596801314	TGCCGTAAATCTT
chr3	45387949	45387950	chr3:45387950:T:C	rs149911107	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	45487833	45487834	chr3:45487834:C:G	rs12492998	C	G	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	45644011	45644012	chr3:45644012:G:C	rs78299269	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	45644022	45644023	chr3:45644023:C:T	rs4377516	C	T	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	45683799	45683800	chr3:45683800:G:C	rs7609874	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	45894205	45894206	chr3:45894206:C:T	rs9855205	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	46091909	46091910	chr3:46091910:A:G	rs1491949	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	46277484	46277485	chr3:46277485:T:C	rs6441950	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	46370767	46370768	chr3:46370768:C:T	rs1799988	C	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	46386267	46386268	chr3:46386268:T:G	rs113116366	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	46460278	46460279	chr3:46460279:C:G	rs4683234	C	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	46670359	46670360	chr3:46670360:A:G	rs3210183	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	46718912	46718913	chr3:46718913:A:G	rs62246210	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	48087964	48087965	chr3:48087965:G:A	rs1325997524	G	A	G	Hoxc9_MA0485.1	0	1	+	9.239313898530774	8.706498765239772	GGTAATCAATCAC
chr3	48090779	48090780	chr3:48090780:C:T	rs114233097	C	T	c	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	48186803	48186804	chr3:48186804:G:A	rs3731493	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	48305494	48305495	chr3:48305495:G:T	rs35778847	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	48665172	48665173	chr3:48665173:A:G	rs9811318	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	48796181	48796182	chr3:48796182:G:T	rs11713694	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	49620007	49620008	chr3:49620008:A:G	rs4855833	A	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	49954151	49954152	chr3:49954152:T:A	rs111292574	T	A	t	Hoxc9_MA0485.1	8	1	-	8.581779380956826	1.6798208708218687	GCCTATAAATTTT
chr3	50164303	50164304	chr3:50164304:T:C	rs150054851	T	C	T	Hoxc9_MA0485.1	12	1	+	8.139203728254532	8.393200682019085	AGGAGTAAATCAT
chr3	50913313	50913314	chr3:50913314:G:A	rs28762180	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	51356827	51356828	chr3:51356828:G:C	rs2306430	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	51422558	51422559	chr3:51422559:G:A	rs62257541	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	52063043	52063044	chr3:52063044:C:T	rs4687608	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	52106865	52106866	chr3:52106866:C:T	rs142393739	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	52688545	52688546	chr3:52688546:T:C	rs35911561	T	C	T	Hoxc9_MA0485.1	6	1	-	8.782018208987713	5.747812442478293	TGTTGTAAATCAT
chr3	53130509	53130510	chr3:53130510:G:C	rs78365485	G	C	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	53490023	53490024	chr3:53490024:G:A	rs312483	G	A	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	53525879	53525880	chr3:53525880:A:G	rs62251864	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	53974563	53974564	chr3:53974564:T:C	rs142172593	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	54320482	54320483	chr3:54320483:T:C	rs9879885	T	C	C	Hoxc9_MA0485.1	7	1	-	8.689658293744692	1.785429224539114	GGCCATCAATTTC
chr3	54322010	54322011	chr3:54322011:G:T	rs6445647	G	T	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	54345952	54345953	chr3:54345953:A:G	rs9848889	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	54379369	54379370	chr3:54379370:C:T	rs7426795	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	54387884	54387885	chr3:54387885:G:A	rs1375521	G	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	54486846	54486847	chr3:54486847:G:A	rs185735166	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	54581943	54581944	chr3:54581944:A:G	rs6782115	A	G	a	Hoxc9_MA0485.1	1	1	+	8.366866523803898	9.926310097713957	CACAATAAATCTG
chr3	55160994	55160995	chr3:55160995:T:C	rs79151330	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	55192496	55192497	chr3:55192497:A:G	rs1461793	A	G	G	Hoxc9_MA0485.1	9	1	-	8.03885726764081	1.1506314532671795	AGCTGTAAATCCA
chr3	55331264	55331265	chr3:55331265:G:A	rs9834227	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	55970738	55970739	chr3:55970739:C:T	rs13073082	C	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	56813802	56813803	chr3:56813803:G:A	rs1566487	G	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	56823758	56823759	chr3:56823759:C:T	rs11929318	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	57078361	57078362	chr3:57078362:C:T	rs62250330	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	57112469	57112470	chr3:57112470:T:C	rs115963368	T	C	T	Hoxc9_MA0485.1	5	1	+	11.134583485055895	6.649272122417412	ACCCATAAATCAG
chr3	57133363	57133364	chr3:57133364:T:C	rs60446548	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	57135619	57135620	chr3:57135620:T:C	rs6807593	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	57145232	57145233	chr3:57145233:C:G	rs6808185	C	G	G	Hoxc9_MA0485.1	12	1	-	7.4716077062603246	8.189663485175203	CCCAATCAATCAG
chr3	57183291	57183292	chr3:57183292:C:T	rs9835093	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	57335588	57335589	chr3:57335589:T:C	rs141854014	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	57350391	57350392	chr3:57350392:T:A	rs6771841	T	A	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	58008000	58008001	chr3:58008001:G:A	chr3:58008001:G:A	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	58008025	58008026	chr3:58008026:C:T	rs72880691	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	58020872	58020873	chr3:58020873:G:A	rs839241	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	58077905	58077906	chr3:58077906:G:T	rs12715521	G	T	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr3	58175254	58175255	chr3:58175255:T:G	rs79550470	T	G	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	58175259	58175260	chr3:58175260:G:A	rs4681786	G	A	A	Hoxc9_MA0485.1	1	1	+	9.45806939281462	7.898625818904558	AGTAGTAAATCAT
chr3	58199123	58199124	chr3:58199124:A:G	rs4681818	A	G	G	Hoxc9_MA0485.1	12	1	-	9.42531101487524	9.679307968639792	ACCCATCAATCAT
chr3	58307373	58307374	chr3:58307374:A:G	rs9818581	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	58359400	58359401	chr3:58359401:G:A	rs6794655	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	58405859	58405860	chr3:58405860:T:C	rs55724153	T	C	t	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	58539798	58539799	chr3:58539799:T:C	rs4309746	T	C	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	58658049	58658050	chr3:58658050:T:C	rs558221216	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	58668509	58668510	chr3:58668510:C:T	rs900879	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	58668537	58668538	chr3:58668538:T:C	rs900878	T	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	58829842	58829843	chr3:58829843:C:T	rs58328499	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	59210543	59210544	chr3:59210544:A:T	rs73838109	A	T	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	59245919	59245920	chr3:59245920:C:A	rs1039384346	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	59304504	59304505	chr3:59304505:G:A	rs541326232	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	59304511	59304512	chr3:59304512:T:C	rs11928900	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	59304519	59304520	chr3:59304520:A:G	rs193113109	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	59307592	59307593	chr3:59307593:T:C	rs11916765	T	C	T	Hoxc9_MA0485.1	8	1	-	8.933225313847972	2.031266803713014	TGCTATAAATTAA
chr3	59368288	59368289	chr3:59368289:G:C	rs4679645	G	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	59463599	59463600	chr3:59463600:A:G	rs1587672	A	G	A	Hoxc9_MA0485.1	4	1	+	13.270417924828896	12.102654210837313	GGCCATAAATCAT
chr3	59470997	59470998	chr3:59470998:G:A	rs76952184	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	59511800	59511801	chr3:59511801:A:G	rs11924123	A	G	A	Hoxc9_MA0485.1	4	1	+	8.830925348954224	7.663161634962641	CACAATAAATCTT
chr3	59531042	59531043	chr3:59531043:G:A	rs75727848	G	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	59531054	59531055	chr3:59531055:A:G	rs73837346	A	G	A	Hoxc9_MA0485.1	8	1	+	10.045514114206519	3.1435556040715613	AGCTATAAATTAT
chr3	59732936	59732937	chr3:59732937:T:C	rs9311723	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	59759797	59759798	chr3:59759798:T:C	rs77380012	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	59759803	59759804	chr3:59759804:T:G	rs9874832	T	G	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	59765064	59765065	chr3:59765065:T:C	rs1126268	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	59998559	59998560	chr3:59998560:T:C	rs3772506	T	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	60011219	60011220	chr3:60011220:T:C	rs7612646	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	60011242	60011243	chr3:60011243:C:T	rs4679627	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	60206459	60206460	chr3:60206460:G:A	rs76154666	G	A	G	Hoxc9_MA0485.1	10	1	-	8.123133318390058	6.319297414081308	GGCAATAAATCGT
chr3	60206479	60206480	chr3:60206480:A:G	rs186153	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	60289422	60289423	chr3:60289423:C:T	rs1003377448	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	60675646	60675647	chr3:60675647:T:G	rs1716717	T	G	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	60746164	60746165	chr3:60746165:T:C	rs17679400	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	60802213	60802214	chr3:60802214:T:C	rs73836148	T	C	T	Hoxc9_MA0485.1	11	1	-	8.482275075906525	4.069741677038157	AAGCATAAATCAT
chr3	60936073	60936074	chr3:60936074:T:C	rs78693890	T	C	T	Hoxc9_MA0485.1	5	1	+	7.365808341123874	2.8804969784853887	GTCAGTCAATCAC
chr3	60980473	60980474	chr3:60980474:T:C	rs113723265	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	61064508	61064509	chr3:61064509:C:G	rs57613432	C	G	c	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	61147024	61147025	chr3:61147025:C:T	rs4309721	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	61191549	61191550	chr3:61191550:T:A	rs78047657	T	A	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	61277187	61277188	chr3:61277188:C:T	rs74278876	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	61541869	61541870	chr3:61541870:G:T	rs76803894	G	T	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	61600438	61600439	chr3:61600439:G:A	rs79241005	G	A	G	Hoxc9_MA0485.1	3	1	-	7.128120165095017	6.2398673920723935	TCCCGTGAATCAC
chr3	61600449	61600450	chr3:61600450:G:A	rs12715572	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr3	61628032	61628033	chr3:61628033:C:T	rs9882445	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	61848877	61848878	chr3:61848878:T:G	chr3:61848878:T:G	T	G	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	61895102	61895103	chr3:61895103:C:G	rs145985486	C	G	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	61895103	61895104	chr3:61895104:A:T	rs138595107	A	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	62340576	62340577	chr3:62340577:C:T	rs2638337	C	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	62682341	62682342	chr3:62682342:G:A	rs71296785	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	62832605	62832606	chr3:62832606:T:G	rs17291925	T	G	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	62837544	62837545	chr3:62837545:C:A	rs73097449	C	A	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	63280330	63280331	chr3:63280331:A:G	rs4688387	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	63544107	63544108	chr3:63544108:T:C	rs2135222	T	C	T	Hoxc9_MA0485.1	4	1	-	8.018216250756199	6.850452536764615	AAGCATAAATCAG
chr3	63559828	63559829	chr3:63559829:T:C	rs6765670	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	63655522	63655523	chr3:63655523:T:C	rs17069202	T	C	T	Hoxc9_MA0485.1	7	1	-	9.512753198988632	2.608524129783052	AAACATAAATCAC
chr3	63863081	63863082	chr3:63863082:A:G	chr3:63863082:A:G	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	64017276	64017277	chr3:64017277:G:A	rs9809432	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	64017318	64017319	chr3:64017319:G:A	rs7617036	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	64031907	64031908	chr3:64031908:C:T	rs254853	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	64047084	64047085	chr3:64047085:C:A	rs6769680	C	A	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	64074451	64074452	chr3:64074452:G:A	rs1450985	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	64121891	64121892	chr3:64121892:A:C	rs704384	A	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	64239654	64239655	chr3:64239655:C:T	rs75343615	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	64501405	64501406	chr3:64501406:G:A	rs78928626	G	A	G	Hoxc9_MA0485.1	3	1	-	7.970337313855326	7.082084540832702	GGCCGTTAATCTC
chr3	64691224	64691225	chr3:64691225:C:G	rs73124290	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	64945459	64945460	chr3:64945460:C:T	rs116645483	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	65246689	65246690	chr3:65246690:C:T	rs1479949	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	65336659	65336660	chr3:65336660:C:T	rs17031792	C	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	65604579	65604580	chr3:65604580:T:C	rs1524964	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	65620055	65620056	chr3:65620056:A:G	rs147054857	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	65752917	65752918	chr3:65752918:T:G	rs12496110	T	G	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	65846133	65846134	chr3:65846134:G:A	rs17379780	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	65894914	65894915	chr3:65894915:G:A	rs77773196	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	65972909	65972910	chr3:65972910:A:T	rs17074200	A	T	A	Hoxc9_MA0485.1	3	1	+	8.633635758611977	8.480134193159822	GCCAATCAATCAA
chr3	66140586	66140587	chr3:66140587:G:A	rs28522951	G	A	G	Hoxc9_MA0485.1	4	1	+	8.698245679901428	9.86600939389301	GTCCGTAAATCTG
chr3	66182573	66182574	chr3:66182574:G:T	rs144105967	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	66304969	66304970	chr3:66304970:A:G	rs144633428	A	G	A	Hoxc9_MA0485.1	9	1	-	8.778001991418163	1.8897761770445292	AAAAATAAATCAC
chr3	66808920	66808921	chr3:66808921:C:T	rs6782706	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr3	66809976	66809977	chr3:66809977:G:A	rs725161	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	66868952	66868953	chr3:66868953:T:C	rs1444048	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	66933608	66933609	chr3:66933609:T:G	rs1378850	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	67094631	67094632	chr3:67094632:T:C	rs7647065	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	67100140	67100141	chr3:67100141:C:A	rs6766938	C	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	67110260	67110261	chr3:67110261:T:C	rs60829667	T	C	T	Hoxc9_MA0485.1	4	1	-	8.438702571350161	7.270938857358577	TCCCATCAATCAG
chr3	67462433	67462434	chr3:67462434:T:C	rs72918998	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	67497032	67497033	chr3:67497033:A:G	rs62256397	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	67672491	67672492	chr3:67672492:G:C	rs11706254	G	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	67764387	67764388	chr3:67764388:C:T	rs6792796	C	T	C	Hoxc9_MA0485.1	3	1	+	7.0718985777871985	6.183645804764574	GCCCGTGAATCTT
chr3	68017339	68017340	chr3:68017340:G:A	rs6800897	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	68467587	68467588	chr3:68467588:C:T	rs114659218	C	T	C	Hoxc9_MA0485.1	4	1	-	7.611572632371409	8.779336346362992	GGCTGTAAATTCC
chr3	68878342	68878343	chr3:68878343:C:G	rs34554146	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	68986956	68986957	chr3:68986957:T:G	rs6804484	T	G	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	69289121	69289122	chr3:69289122:C:T	rs144415053	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	69406082	69406083	chr3:69406083:C:G	rs72939735	C	G	G	Hoxc9_MA0485.1	12	1	+	7.438294493877579	6.720238714962702	TCCCATGAATCTC
chr3	69678549	69678550	chr3:69678550:G:C	rs111438597	G	C	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	69806542	69806543	chr3:69806543:T:A	rs11917130	T	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	69871502	69871503	chr3:69871503:C:T	rs549071868	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	69929027	69929028	chr3:69929028:C:A	rs74688855	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	70011791	70011792	chr3:70011792:C:T	rs183455280	C	T	C	Hoxc9_MA0485.1	12	1	+	9.19848508399655	8.944488130231997	ACAAATAAATCAC
chr3	70170163	70170164	chr3:70170164:A:C	rs13099927	A	C	A	Hoxc9_MA0485.1	11	1	-	8.720070439457237	5.165126425797891	AGGCATAAATCTG
chr3	70426085	70426086	chr3:70426086:C:T	rs11927774	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	70531279	70531280	chr3:70531280:C:T	rs1163379970	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	70603150	70603151	chr3:70603151:C:A	rs12489469	C	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	70822247	70822248	chr3:70822248:A:T	rs1002200	A	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	71166347	71166348	chr3:71166348:A:G	rs9845218	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	71269888	71269889	chr3:71269889:A:T	rs2280519	A	T	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	71361481	71361482	chr3:71361482:T:A	rs537084315	T	A	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	71361511	71361512	chr3:71361512:G:A	rs75721650	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	71385761	71385762	chr3:71385762:C:T	rs7645749	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	71497887	71497888	chr3:71497888:G:A	rs6798507	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	71506053	71506054	chr3:71506054:C:A	rs17718736	C	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	71617383	71617384	chr3:71617384:C:T	rs864380	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	71677118	71677119	chr3:71677119:T:G	rs704293	T	G	T	Hoxc9_MA0485.1	11	1	-	8.482275075906525	6.429285221007445	AAGCATAAATCAT
chr3	71688229	71688230	chr3:71688230:A:G	rs148682704	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	71703954	71703955	chr3:71703955:A:C	rs1349029	A	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	71992780	71992781	chr3:71992781:T:C	rs11720188	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	72099967	72099968	chr3:72099968:A:G	rs3749430	A	G	a	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	72099992	72099993	chr3:72099993:A:G	rs3749431	A	G	G	Hoxc9_MA0485.1	2	1	-	10.09137991441802	11.468398391579242	GGTTGTAAATCAC
chr3	72274967	72274968	chr3:72274968:G:A	rs80146652	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	72283308	72283309	chr3:72283309:G:C	rs6783293	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	72307140	72307141	chr3:72307141:C:T	rs61327071	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	72427458	72427459	chr3:72427459:G:A	rs115879011	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	72457813	72457814	chr3:72457814:A:G	rs28619449	A	G	A	Hoxc9_MA0485.1	8	1	+	10.012671313410204	3.110712803275244	GGAAATAAATCTC
chr3	72757153	72757154	chr3:72757154:C:A	rs77170374	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	72820550	72820551	chr3:72820551:T:C	rs895493706	T	C	T	Hoxc9_MA0485.1	12	1	+	10.681586304523687	10.93558325828824	AGCTGTAAATCAT
chr3	72916481	72916482	chr3:72916482:C:G	rs72880215	C	G	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	72973510	72973511	chr3:72973511:G:A	rs13081565	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	73295721	73295722	chr3:73295722:C:A	rs6795726	C	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	73319125	73319126	chr3:73319126:C:T	rs4677254	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	73319420	73319421	chr3:73319421:G:A	rs34642915	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	73394899	73394900	chr3:73394900:C:T	rs6549533	C	T	T	Hoxc9_MA0485.1	12	1	-	8.661110537578427	8.535430180744957	AACCATAAATCCG
chr3	73408408	73408409	chr3:73408409:A:G	rs1488128	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	73419089	73419090	chr3:73419090:A:G	rs765807682	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr3	73572535	73572536	chr3:73572536:C:G	rs80297420	C	G	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	73572558	73572559	chr3:73572559:C:T	rs566539631	C	T	C	Hoxc9_MA0485.1	10	1	+	11.330089645596022	9.52625374128727	TCCCATAAATCAC
chr3	73604621	73604622	chr3:73604622:G:A	rs9822882	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	73695510	73695511	chr3:73695511:A:C	rs11128363	A	C	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	73695557	73695558	chr3:73695558:A:G	rs9859494	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	73719776	73719777	chr3:73719777:A:G	rs907342	A	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	74063873	74063874	chr3:74063874:C:A	rs9823462	C	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	74343688	74343689	chr3:74343689:G:A	rs1488802	G	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	75948676	75948677	chr3:75948677:T:C	rs17785702	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	76047488	76047489	chr3:76047489:G:C	rs73841090	G	C	C	Hoxc9_MA0485.1	12	1	-	7.382112959373483	6.664057180458606	TGCTGTCAATCTC
chr3	76359989	76359990	chr3:76359990:T:C	rs72631203	T	C	T	Hoxc9_MA0485.1	0	1	-	8.291037850346266	8.823852983637266	AGCCATAAATTCA
chr3	76698664	76698665	chr3:76698665:T:A	rs2597256	T	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	76841729	76841730	chr3:76841730:A:G	rs1166951	A	G	A	Hoxc9_MA0485.1	5	1	-	9.162098373556509	4.676787010918024	GCTAATAAATCTT
chr3	77198641	77198642	chr3:77198642:C:T	rs1441965	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	77427816	77427817	chr3:77427817:A:G	rs73099859	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	77513759	77513760	chr3:77513760:C:A	rs4490332	C	A	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	78086299	78086300	chr3:78086300:G:T	rs908904175	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	78109300	78109301	chr3:78109301:T:A	rs188311397	T	A	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	78205200	78205201	chr3:78205201:T:C	rs59351370	T	C	C	Hoxc9_MA0485.1	12	1	+	8.320625552977754	8.574622506742307	AGCTATTAATCAT
chr3	78258609	78258610	chr3:78258610:A:T	rs9309794	A	T	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	78375954	78375955	chr3:78375955:C:T	rs12714467	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	78406420	78406421	chr3:78406421:T:C	rs10865566	T	C	t	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	78828373	78828374	chr3:78828374:T:C	rs548699168	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	78859020	78859021	chr3:78859021:T:C	rs1383407	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	78972061	78972062	chr3:78972062:G:A	rs3890510	G	A	G	Hoxc9_MA0485.1	0	1	+	8.74421329730328	8.211398164012277	GGCCTTAAATCTT
chr3	79423632	79423633	chr3:79423633:G:C	rs1008273801	G	C	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	79423646	79423647	chr3:79423647:G:A	rs56964141	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	79491491	79491492	chr3:79491492:T:A	rs923346279	T	A	T	Hoxc9_MA0485.1	2	1	+	8.057825883257053	7.51544138801452	TGTCATGAATCAC
chr3	79651582	79651583	chr3:79651583:T:A	rs747357719	T	A	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	79806107	79806108	chr3:79806108:T:G	rs4856351	T	G	G	Hoxc9_MA0485.1	3	1	-	9.493709429579875	10.228460637150343	AGAAATAAATCAA
chr3	80160141	80160142	chr3:80160142:T:G	rs9860888	T	G	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	81190412	81190413	chr3:81190413:A:G	rs13078650	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	81959591	81959592	chr3:81959592:T:C	rs7646645	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	84151381	84151382	chr3:84151382:T:C	rs6767473	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	85419068	85419069	chr3:85419069:T:G	rs1290784913	T	G	T	Hoxc9_MA0485.1	6	1	-	8.058871892755688	5.885540597424705	CTTCATAAATCAG
chr3	85585163	85585164	chr3:85585164:A:G	rs79465076	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	85585174	85585175	chr3:85585175:A:G	rs62250502	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	85585175	85585176	chr3:85585176:C:A	rs73139828	C	A	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	86212330	86212331	chr3:86212331:A:G	rs9833236	A	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	86758500	86758501	chr3:86758501:A:G	rs4855171	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	86848874	86848875	chr3:86848875:A:G	rs11127961	A	G	A	Hoxc9_MA0485.1	11	1	+	8.582453902042406	4.169920503174036	TTCCATAAATTAC
chr3	86888114	86888115	chr3:86888115:T:C	rs79938369	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	87069159	87069160	chr3:87069160:A:G	rs2660765	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	87125485	87125486	chr3:87125486:G:A	rs6788255	G	A	A	Hoxc9_MA0485.1	1	1	+	8.971159811205123	7.411716237295063	TGAAATAAATCAA
chr3	87125934	87125935	chr3:87125935:T:C	rs55669402	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	87202211	87202212	chr3:87202212:C:T	rs58547955	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	87202217	87202218	chr3:87202218:T:C	rs74791426	T	C	T	Hoxc9_MA0485.1	7	1	-	8.81765824575297	1.9134291765473905	TGATATAAATCAA
chr3	87229138	87229139	chr3:87229139:A:G	rs3828364	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	87311513	87311514	chr3:87311514:T:C	rs76107227	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	88032645	88032646	chr3:88032646:A:G	rs9844342	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	88958994	88958995	chr3:88958995:G:A	rs62271104	G	A	G	Hoxc9_MA0485.1	2	1	-	9.121759799698015	7.744741322536794	AACAATAAATCTG
chr3	88962249	88962250	chr3:88962250:C:T	rs885393	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	88962267	88962268	chr3:88962268:C:G	rs4855820	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	88964155	88964156	chr3:88964156:G:A	rs953476	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	89358412	89358413	chr3:89358413:C:A	rs111565107	C	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	89467968	89467969	chr3:89467969:C:T	rs73141108	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	89535784	89535785	chr3:89535785:G:C	rs75768785	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	89624861	89624862	chr3:89624862:G:A	rs77102556	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	94092333	94092334	chr3:94092334:A:G	rs144231185	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	94615768	94615769	chr3:94615769:T:C	rs1387103	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	95138312	95138313	chr3:95138313:A:G	rs11925057	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	95155354	95155355	chr3:95155355:A:G	rs9848285	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	95187255	95187256	chr3:95187256:T:C	rs190361701	T	C	T	Hoxc9_MA0485.1	11	1	-	9.272256787522718	4.859723388654349	TCCCATAAATTAT
chr3	95187266	95187267	chr3:95187267:A:T	rs72918626	A	T	A	Hoxc9_MA0485.1	0	1	-	9.272256787522718	9.79480640589747	TCCCATAAATTAT
chr3	95257793	95257794	chr3:95257794:A:G	rs11710032	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	95257794	95257795	chr3:95257795:A:C	rs11710033	A	C	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	95291707	95291708	chr3:95291708:G:A	rs761507526	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	96267379	96267380	chr3:96267380:A:G	rs56812082	A	G	a	Hoxc9_MA0485.1	5	1	-	8.50026418194945	4.014952819310966	TCTAATAAATCAG
chr3	96327694	96327695	chr3:96327695:A:G	rs9713732	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	96327706	96327707	chr3:96327707:G:A	rs9864430	G	A	A	Hoxc9_MA0485.1	12	1	-	8.137328736183363	7.883331782418812	GACCATAAAACAC
chr3	96727643	96727644	chr3:96727644:C:T	rs58189959	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	96731499	96731500	chr3:96731500:T:G	rs4345081	T	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	96731500	96731501	chr3:96731501:T:C	rs4269095	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	96761155	96761156	chr3:96761156:T:G	rs138030099	T	G	T	Hoxc9_MA0485.1	7	1	-	7.97094090813563	1.0667118389300518	GGTTATGAATCAT
chr3	96857482	96857483	chr3:96857483:A:G	rs9874657	A	G	G	Hoxc9_MA0485.1	5	1	-	8.14935286651189	3.6640415038734035	GGCAATTAATCTT
chr3	96857483	96857484	chr3:96857484:T:C	rs9878741	T	C	C	Hoxc9_MA0485.1	4	1	-	8.14935286651189	6.981589152520306	GGCAATTAATCTT
chr3	97390165	97390166	chr3:97390166:G:A	rs544050168	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	97810993	97810994	chr3:97810994:A:G	rs877965	A	G	g	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	97840497	97840498	chr3:97840498:T:C	rs7621778	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	98010483	98010484	chr3:98010484:A:G	rs832027	A	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	98696038	98696039	chr3:98696039:A:G	rs72930917	A	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	98696074	98696075	chr3:98696075:A:G	rs72930920	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	98721176	98721177	chr3:98721177:T:C	rs278363	T	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	98971213	98971214	chr3:98971214:A:G	rs35936923	A	G	A	Hoxc9_MA0485.1	8	1	+	8.362500469417334	1.4605419592823754	GCCAATGAATCAT
chr3	99100804	99100805	chr3:99100805:T:G	rs7637231	T	G	T	Hoxc9_MA0485.1	8	1	-	7.811463305792809	2.961061133848149	GGGCATCAATCAA
chr3	99100983	99100984	chr3:99100984:A:G	rs7634953	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr3	99256998	99256999	chr3:99256999:C:T	rs112907577	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	99504219	99504220	chr3:99504220:T:C	rs73858458	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	99703242	99703243	chr3:99703243:G:C	rs34035139	G	C	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr3	99760766	99760767	chr3:99760767:A:G	chr3:99760767:A:G	A	G	A	Hoxc9_MA0485.1	11	1	-	7.150429021398738	5.95502855170868	GGCGATAAATCTC
chr3	99871472	99871473	chr3:99871473:C:T	rs545044063	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	100347783	100347784	chr3:100347784:G:T	rs6784494	G	T	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	100492241	100492242	chr3:100492242:C:T	rs556104592	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	100641503	100641504	chr3:100641504:C:T	rs1471375	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	100831805	100831806	chr3:100831806:G:A	rs9840549	G	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	100837991	100837992	chr3:100837992:G:A	rs73135589	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	100870066	100870067	chr3:100870067:T:C	rs146419831	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	100870098	100870099	chr3:100870099:T:A	rs12330531	T	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	101123291	101123292	chr3:101123292:C:A	rs67338296	C	A	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	101310766	101310767	chr3:101310767:T:C	rs72936163	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	101861315	101861316	chr3:101861316:A:G	rs79839341	A	G	A	Hoxc9_MA0485.1	11	1	+	7.8008821034664235	3.388348704598054	AGCAGTGAATCAT
chr3	101901770	101901771	chr3:101901771:G:A	rs75912744	G	A	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	101999582	101999583	chr3:101999583:G:T	chr3:101999583:G:T	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	102089281	102089282	chr3:102089282:G:A	rs1996523	G	A	g	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	102229308	102229309	chr3:102229309:G:T	rs146788365	G	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	102258333	102258334	chr3:102258334:C:A	rs9875116	C	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	102290441	102290442	chr3:102290442:A:T	rs6808327	A	T	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	102629545	102629546	chr3:102629546:C:T	rs13090044	C	T	C	Hoxc9_MA0485.1	1	1	-	8.580375501631803	7.020931927721741	AGTCATGAATCAC
chr3	102855112	102855113	chr3:102855113:G:A	rs2196969	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	102855132	102855133	chr3:102855133:A:G	rs9857306	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	102883500	102883501	chr3:102883501:A:G	rs697788	A	G	A	Hoxc9_MA0485.1	4	1	+	8.859193681158253	7.691429967166671	GGTCATGAATCAT
chr3	102953555	102953556	chr3:102953556:C:T	rs9790049	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	103188686	103188687	chr3:103188687:A:G	rs144036787	A	G	A	Hoxc9_MA0485.1	5	1	-	8.633192851837478	4.1478814891989915	GCCCATGAATCAG
chr3	103296408	103296409	chr3:103296409:T:G	rs112224079	T	G	T	Hoxc9_MA0485.1	9	1	+	9.731300217287552	2.8430744029139188	GCAAATAAATCAC
chr3	103439992	103439993	chr3:103439993:T:C	rs6803296	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	103678375	103678376	chr3:103678376:A:C	rs2175470	A	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	103728162	103728163	chr3:103728163:G:A	rs10937571	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	104276473	104276474	chr3:104276474:C:T	rs2895276	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	104518528	104518529	chr3:104518529:G:T	rs2961190	G	T	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	104520809	104520810	chr3:104520810:G:A	rs2961318	G	A	A	Hoxc9_MA0485.1	12	1	+	10.046254792907495	9.920574436074025	GGCAGTAAATCTG
chr3	104555985	104555986	chr3:104555986:T:C	rs876905	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	105176702	105176703	chr3:105176703:A:G	rs62261258	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	105533842	105533843	chr3:105533843:G:A	rs2399049	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr3	105613214	105613215	chr3:105613215:T:A	rs78502815	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr3	105649532	105649533	chr3:105649533:C:A	rs77373663	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	105767410	105767411	chr3:105767411:T:C	rs3772515	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	105899579	105899580	chr3:105899580:C:G	rs77710339	C	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	105956585	105956586	chr3:105956586:T:C	rs73190022	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	105967309	105967310	chr3:105967310:C:T	rs191785470	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	106014938	106014939	chr3:106014939:G:T	rs149782095	G	T	G	Hoxc9_MA0485.1	1	1	+	9.02469483256339	6.94193451198685	GGGCATAAATTAC
chr3	106131218	106131219	chr3:106131219:A:T	rs73004403	A	T	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr3	106144226	106144227	chr3:106144227:G:A	rs142371157	G	A	G	Hoxc9_MA0485.1	1	1	-	9.720727510915431	8.776927671670567	CCTCATAAATCAC
chr3	106176643	106176644	chr3:106176644:G:A	rs72926232	G	A	A	Hoxc9_MA0485.1	3	1	-	8.450583151181945	7.562330378159323	ACCCATAAATAAG
chr3	106333001	106333002	chr3:106333002:T:C	rs7616865	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	106380029	106380030	chr3:106380030:A:C	rs62255016	A	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	106380698	106380699	chr3:106380699:T:C	rs117380455	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	106525773	106525774	chr3:106525774:G:A	rs73203280	G	A	g	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	106560532	106560533	chr3:106560533:C:G	rs116490071	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	106566607	106566608	chr3:106566608:C:T	rs12639414	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	106580232	106580233	chr3:106580233:A:C	rs61070612	A	C	A	Hoxc9_MA0485.1	11	1	-	7.25945946064567	3.7045154469863233	GCTCATCAATCTG
chr3	106769330	106769331	chr3:106769331:C:T	rs7620084	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	106820427	106820428	chr3:106820428:C:A	rs4895042	C	A	c	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	106864060	106864061	chr3:106864061:T:C	rs9875105	T	C	t	Hoxc9_MA0485.1	6	1	-	7.855964962770102	4.82175919626068	GACTGTAAATCCC
chr3	107209044	107209045	chr3:107209045:T:C	rs138929991	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	107263469	107263470	chr3:107263470:G:A	rs709567	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	107909328	107909329	chr3:107909329:A:G	rs3910485	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	107978532	107978533	chr3:107978533:G:A	rs73198323	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	107978579	107978580	chr3:107978580:T:C	rs709496	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	108487058	108487059	chr3:108487059:T:C	rs6437784	T	C	T	Hoxc9_MA0485.1	1	1	+	10.190783645811031	11.134583485055895	ATCCATAAATCAG
chr3	108847550	108847551	chr3:108847551:C:T	rs2715715	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	108964751	108964752	chr3:108964752:A:G	rs2593935	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	109315272	109315273	chr3:109315273:G:T	rs11712428	G	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	109612172	109612173	chr3:109612173:G:A	rs62281684	G	A	G	Hoxc9_MA0485.1	1	1	+	10.681586304523687	9.122142730613627	AGCTGTAAATCAT
chr3	110575779	110575780	chr3:110575780:C:T	rs6780070	C	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	110995911	110995912	chr3:110995912:C:T	rs9835919	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	111312134	111312135	chr3:111312135:C:T	rs112805943	C	T	C	Hoxc9_MA0485.1	3	1	+	8.037991006389271	7.149738233366647	AGACATGAATCAC
chr3	111535545	111535546	chr3:111535546:G:A	rs2221065	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	111751620	111751621	chr3:111751621:G:C	rs10934106	G	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	111854993	111854994	chr3:111854994:G:A	rs1282982	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	112096430	112096431	chr3:112096431:A:G	rs340157	A	G	G	Hoxc9_MA0485.1	11	1	-	11.35746378795412	10.162063318264062	TGCCATAAATCTT
chr3	112133465	112133466	chr3:112133466:G:A	rs61645341	G	A	G	Hoxc9_MA0485.1	0	1	+	9.176383307833065	8.643568174542063	GTTTATAAATCAC
chr3	112133477	112133478	chr3:112133478:C:T	rs146849081	C	T	C	Hoxc9_MA0485.1	12	1	+	9.176383307833065	8.922386354068513	GTTTATAAATCAC
chr3	112551143	112551144	chr3:112551144:T:C	rs16859758	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	112579688	112579689	chr3:112579689:G:A	rs77517158	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	112633940	112633941	chr3:112633941:G:A	rs12636231	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	112641191	112641192	chr3:112641192:T:C	rs28364604	T	C	T	Hoxc9_MA0485.1	9	1	+	9.300244418337044	2.4120186039634097	CATCATAAATCAC
chr3	112641205	112641206	chr3:112641206:G:A	rs28364603	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	112643340	112643341	chr3:112643341:A:G	rs6772337	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	112643354	112643355	chr3:112643355:C:G	rs182081858	C	G	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	112786775	112786776	chr3:112786776:C:T	rs13082544	C	T	C	Hoxc9_MA0485.1	1	1	-	11.778572720361803	10.219129146451742	GGCTATAAATCTC
chr3	112814731	112814732	chr3:112814732:A:G	rs9809591	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	112861221	112861222	chr3:112861222:A:G	rs9842637	A	G	G	Hoxc9_MA0485.1	8	1	+	9.11365784304468	2.2116993329097197	AGCCATGAATCAA
chr3	113117760	113117761	chr3:113117761:G:A	rs185450209	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	113194461	113194462	chr3:113194462:A:G	rs9288978	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	113553360	113553361	chr3:113553361:G:A	rs1513287	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	113892620	113892621	chr3:113892621:C:T	rs7634937	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr3	114120387	114120388	chr3:114120388:C:T	rs11715906	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	114841633	114841634	chr3:114841634:A:G	rs6802717	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	115015000	115015001	chr3:115015001:C:T	rs111480044	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	115101158	115101159	chr3:115101159:A:G	rs9289008	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	115284623	115284624	chr3:115284624:G:A	rs143396396	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	115704963	115704964	chr3:115704964:G:T	rs17760881	G	T	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr3	115706382	115706383	chr3:115706383:A:G	rs2918212	A	G	A	Hoxc9_MA0485.1	9	1	-	9.1332951408966	2.2450693265229678	GGTAGTAAATCTT
chr3	115863098	115863099	chr3:115863099:A:G	rs61391157	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	115863129	115863130	chr3:115863130:T:C	rs16824161	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	115881686	115881687	chr3:115881687:G:A	rs68160605	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	115928739	115928740	chr3:115928740:G:A	rs73149050	G	A	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	116059986	116059987	chr3:116059987:T:C	rs147540512	T	C	T	Hoxc9_MA0485.1	2	1	-	8.99020358061388	8.213722411296326	TAACATAAATCAC
chr3	116098182	116098183	chr3:116098183:G:A	rs66490447	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	116098223	116098224	chr3:116098224:C:A	rs73139202	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	116195999	116196000	chr3:116196000:A:T	rs998806	A	T	T	Hoxc9_MA0485.1	12	1	+	8.945273986727296	9.535013168711092	CACTATAAATCAA
chr3	116389651	116389652	chr3:116389652:T:C	rs6438315	T	C	C	Hoxc9_MA0485.1	3	1	+	9.873022997418722	10.761275770441346	GGATATAAATCAA
chr3	116651597	116651598	chr3:116651598:T:C	rs7631317	T	C	T	Hoxc9_MA0485.1	9	1	+	9.29506709624826	2.4068412818746268	GGCTGTCAATCAC
chr3	116708261	116708262	chr3:116708262:T:C	rs1401073	T	C	C	Hoxc9_MA0485.1	3	1	+	10.541087849494724	11.429340622517346	GGTTATAAATCAG
chr3	116749472	116749473	chr3:116749473:T:C	rs13078249	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	116870419	116870420	chr3:116870420:T:C	rs6438359	T	C	C	Hoxc9_MA0485.1	5	1	+	9.231974158149898	4.746662795511415	GGTCATAAATTTT
chr3	117010425	117010426	chr3:117010426:C:T	rs35258147	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	117045162	117045163	chr3:117045163:A:G	rs12497655	A	G	A	Hoxc9_MA0485.1	4	1	+	8.056007971842554	6.888244257850971	CCCAATAAATCCT
chr3	117168576	117168577	chr3:117168577:C:T	rs9880688	C	T	T	Hoxc9_MA0485.1	6	1	-	8.700093152847806	11.734298919357228	TGCAATGAATCAC
chr3	117175743	117175744	chr3:117175744:C:T	rs2137212	C	T	c	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	117249227	117249228	chr3:117249228:A:G	rs1011983	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	117279075	117279076	chr3:117279076:A:G	chr3:117279076:A:G	A	G	A	Hoxc9_MA0485.1	8	1	+	7.756582347916765	0.8546238377818036	CCACGTAAATCAT
chr3	117798779	117798780	chr3:117798780:T:C	rs9825411	T	C	T	Hoxc9_MA0485.1	8	1	-	8.581107671005018	1.679149160870058	GCTCATCAATCAT
chr3	117798804	117798805	chr3:117798805:C:T	rs74696602	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	117811927	117811928	chr3:117811928:C:T	rs62264956	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	117855519	117855520	chr3:117855520:T:C	rs13090448	T	C	T	Hoxc9_MA0485.1	1	1	+	8.953049741882113	9.896849581126977	GTTCATAAATCTT
chr3	117872508	117872509	chr3:117872509:A:G	rs7622841	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	117884267	117884268	chr3:117884268:T:C	rs17665813	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	119237658	119237659	chr3:119237659:G:A	rs6785453	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	119275329	119275330	chr3:119275330:C:G	rs9289126	C	G	G	Hoxc9_MA0485.1	12	1	-	8.592761345794287	9.310817124709166	GAAAATAAATCAG
chr3	119442602	119442603	chr3:119442603:C:T	rs112113709	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	119642096	119642097	chr3:119642097:C:T	rs8422	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	119671371	119671372	chr3:119671372:G:A	rs6794484	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	120044143	120044144	chr3:120044144:T:C	rs112432269	T	C	C	Hoxc9_MA0485.1	2	1	+	10.625833106806203	12.002851583967425	AGTAATAAATCAT
chr3	120348468	120348469	chr3:120348469:A:G	rs6791815	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	120393615	120393616	chr3:120393616:C:T	rs34805176	C	T	c	Hoxc9_MA0485.1	25	0	-	0	0	.
chr3	120393636	120393637	chr3:120393637:C:G	rs1147693	C	G	g	Hoxc9_MA0485.1	4	1	-	7.254867217918886	3.284704250660811	ACTCGTAAATCCC
chr3	120421194	120421195	chr3:120421195:C:A	rs36068602	C	A	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	120648475	120648476	chr3:120648476:C:T	rs112488469	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	120673470	120673471	chr3:120673471:A:G	rs74356584	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	120673478	120673479	chr3:120673479:C:T	rs79072367	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	121559935	121559936	chr3:121559936:T:C	rs571217	T	C	c	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	121825393	121825394	chr3:121825394:T:C	rs79488379	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	121837371	121837372	chr3:121837372:C:T	rs9826473	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	122146211	122146212	chr3:122146212:C:T	rs937630	C	T	C	Hoxc9_MA0485.1	12	1	+	9.444211769340072	9.19021481557552	GCCTATAAATCCC
chr3	122178730	122178731	chr3:122178731:G:A	rs11714681	G	A	G	Hoxc9_MA0485.1	0	1	+	10.586417590954948	10.053602457663947	GGCCATAAATAAT
chr3	122540792	122540793	chr3:122540793:T:C	rs28365795	T	C	T	Hoxc9_MA0485.1	4	1	-	8.720073667472812	7.55230995348123	TGCCATCAATCTG
chr3	122926179	122926180	chr3:122926180:T:C	rs75377252	T	C	c	Hoxc9_MA0485.1	6	1	-	8.15565505316365	5.121449286654231	GCAAATAAATCTG
chr3	122936548	122936549	chr3:122936549:C:G	rs73193872	C	G	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	122941597	122941598	chr3:122941598:A:C	rs56310107	A	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	122945031	122945032	chr3:122945032:T:C	rs73856757	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	123035125	123035126	chr3:123035126:T:C	rs1123613	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	123155631	123155632	chr3:123155632:C:T	rs560178720	C	T	c	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	123373300	123373301	chr3:123373301:A:C	rs77380967	A	C	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr3	123387804	123387805	chr3:123387805:T:C	rs10451896	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	123663983	123663984	chr3:123663984:A:G	rs820324	A	G	A	Hoxc9_MA0485.1	8	1	+	8.114418958977929	1.21246044884297	CCTTATAAATCAG
chr3	123745286	123745287	chr3:123745287:T:C	rs77678196	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	124053915	124053916	chr3:124053916:A:G	rs551511291	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	124131540	124131541	chr3:124131541:T:G	rs79327587	T	G	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	124663828	124663829	chr3:124663829:A:G	rs231601	A	G	G	Hoxc9_MA0485.1	12	1	-	8.104493073531135	8.358490027295687	TCCCGTAAATTAT
chr3	124924985	124924986	chr3:124924986:C:T	rs11717226	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	125025763	125025764	chr3:125025764:C:T	rs75824484	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	125035317	125035318	chr3:125035318:G:T	rs56036184	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	125125964	125125965	chr3:125125965:C:T	rs549791177	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr3	125125994	125125995	chr3:125125995:T:C	rs115538987	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr3	125763322	125763323	chr3:125763323:G:A	rs9869769	G	A	.	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	125942896	125942897	chr3:125942897:T:A	rs112176486	T	A	t	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	125961205	125961206	chr3:125961206:G:C	rs10934738	G	C	c	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	126003568	126003569	chr3:126003569:G:A	rs571051713	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr3	126085341	126085342	chr3:126085342:C:A	rs11706188	C	A	C	Hoxc9_MA0485.1	12	1	+	9.084922302718777	8.241186166970428	CACAATAAATCTC
chr3	126136755	126136756	chr3:126136756:G:T	rs2305229	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	126265603	126265604	chr3:126265604:A:G	rs144927956	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	126485369	126485370	chr3:126485370:A:G	rs1799387	A	G	A	Hoxc9_MA0485.1	8	1	+	7.985705390817954	1.0837468806829942	TGCTGTCAATCAT
chr3	126861366	126861367	chr3:126861367:T:G	rs73203698	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	127425182	127425183	chr3:127425183:C:G	rs73196826	C	G	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	127425187	127425188	chr3:127425188:A:T	rs10934814	A	T	A	Hoxc9_MA0485.1	4	1	+	8.90996022303787	5.241344980721274	AGCCATAAAACAT
chr3	127524299	127524300	chr3:127524300:C:T	rs372837068	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	127776374	127776375	chr3:127776375:G:T	rs68125058	G	T	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	128076899	128076900	chr3:128076900:C:T	rs145227301	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	128077161	128077162	chr3:128077162:C:G	rs2010972	C	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	128258990	128258991	chr3:128258991:T:C	rs73197359	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	128495150	128495151	chr3:128495151:G:A	rs35006112	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	128499082	128499083	chr3:128499083:G:A	rs748793012	G	A	G	Hoxc9_MA0485.1	12	1	-	8.728124072194461	8.474127118429909	AGCAATTAATCAC
chr3	128611293	128611294	chr3:128611294:T:C	rs2253151	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	129067819	129067820	chr3:129067820:T:C	rs191585218	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	129469179	129469180	chr3:129469180:T:G	rs2285350	T	G	T	Hoxc9_MA0485.1	8	1	-	8.961252189724913	4.110850017780254	ACCCATCAATCAG
chr3	129521851	129521852	chr3:129521852:A:G	rs544226162	A	G	A	Hoxc9_MA0485.1	8	1	+	8.915753528409413	2.0137950182744513	AGCAGTCAATCAC
chr3	129954132	129954133	chr3:129954133:C:T	rs1708884	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	129954148	129954149	chr3:129954149:A:G	rs1708233	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	130097469	130097470	chr3:130097470:G:A	rs73866094	G	A	g	Hoxc9_MA0485.1	10	1	-	8.452620627874419	6.648784723565668	CTCCATAAATCTA
chr3	130425831	130425832	chr3:130425832:C:T	rs12330914	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	131908146	131908147	chr3:131908147:T:C	rs1225004	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	132187749	132187750	chr3:132187750:T:C	rs1395006	T	C	T	Hoxc9_MA0485.1	12	1	+	7.988732022933082	8.242728976697633	TGCCATCAATCCT
chr3	132405665	132405666	chr3:132405666:T:C	rs116784274	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	132418414	132418415	chr3:132418415:A:G	rs11713327	A	G	G	Hoxc9_MA0485.1	11	1	+	7.939673926041725	3.527140527173356	GGCTGTTAATCAC
chr3	132446210	132446211	chr3:132446211:T:A	rs1979847	T	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	132848564	132848565	chr3:132848565:T:C	rs115945165	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	132848573	132848574	chr3:132848574:C:T	rs111378477	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	132879468	132879469	chr3:132879469:A:G	rs74922154	A	G	A	Hoxc9_MA0485.1	9	1	+	8.90996022303787	5.8493769771642645	AGCCATAAAACAT
chr3	132965527	132965528	chr3:132965528:T:G	rs9843082	T	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	133764851	133764852	chr3:133764852:T:C	rs1880669	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	133860930	133860931	chr3:133860931:G:A	rs17376789	G	A	G	Hoxc9_MA0485.1	4	1	+	7.325895531551749	8.493659245543334	GCCCGTGAATCTC
chr3	133937588	133937589	chr3:133937589:A:C	rs6439448	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	133973348	133973349	chr3:133973349:T:G	rs77544380	T	G	T	Hoxc9_MA0485.1	11	1	-	8.33423634165083	6.28124648675175	AGCATTAAATCAT
chr3	134030396	134030397	chr3:134030397:T:C	rs549557855	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	134069804	134069805	chr3:134069805:A:G	rs4355278	A	G	a	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	134078376	134078377	chr3:134078377:T:C	rs73221236	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	134377037	134377038	chr3:134377038:A:G	rs144924397	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	134846970	134846971	chr3:134846971:G:A	rs62272437	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	134912135	134912136	chr3:134912136:C:T	rs72971611	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	134912179	134912180	chr3:134912180:T:C	rs36208	T	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	134939425	134939426	chr3:134939426:G:A	rs372088079	G	A	G	Hoxc9_MA0485.1	4	1	+	9.593512056449763	10.761275770441346	GGACGTAAATCAA
chr3	135382400	135382401	chr3:135382401:G:A	rs16842962	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	135476437	135476438	chr3:135476438:G:A	rs187669517	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	135524028	135524029	chr3:135524029:A:G	rs7622903	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	135546556	135546557	chr3:135546557:G:A	rs972869	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	136169799	136169800	chr3:136169800:A:G	rs73222236	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	136650867	136650868	chr3:136650868:T:C	rs4521165	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	136672029	136672030	chr3:136672030:A:C	rs140774039	A	C	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	136752972	136752973	chr3:136752973:C:T	rs900818	C	T	T	Hoxc9_MA0485.1	1	1	-	7.411302632442495	5.851859058532434	AGCCGTAAATCGC
chr3	136900723	136900724	chr3:136900724:A:G	rs6783508	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	136902874	136902875	chr3:136902875:A:C	rs4678452	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	137051101	137051102	chr3:137051102:A:G	rs4678222	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	137465081	137465082	chr3:137465082:G:A	rs115397325	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	137989179	137989180	chr3:137989180:C:T	rs4678397	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	138003032	138003033	chr3:138003033:A:G	rs4678398	A	G	G	Hoxc9_MA0485.1	6	1	+	9.30711039914318	6.272904632633762	GCTCATAAATCTA
chr3	138226349	138226350	chr3:138226350:C:T	rs4678258	C	T	C	Hoxc9_MA0485.1	1	1	+	8.019401989958059	7.075602150713196	CCTCATAAATCTA
chr3	138375762	138375763	chr3:138375763:G:A	rs940233	G	A	G	Hoxc9_MA0485.1	4	1	+	8.276448055348489	9.444211769340072	GCCTGTAAATCCC
chr3	138547792	138547793	chr3:138547793:G:A	rs12632794	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	138830166	138830167	chr3:138830167:A:G	rs2881900	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	138949849	138949850	chr3:138949850:T:C	rs61408596	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	139468532	139468533	chr3:139468533:T:C	rs3772878	T	C	t	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	139646724	139646725	chr3:139646725:G:A	rs7639773	G	A	G	Hoxc9_MA0485.1	1	1	-	8.360863880043452	7.417064040798588	GCTCATAAATTAA
chr3	139765748	139765749	chr3:139765749:T:A	rs1447717	T	A	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	140170726	140170727	chr3:140170727:A:G	rs1041668771	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	140527215	140527216	chr3:140527216:A:G	rs567167	A	G	A	Hoxc9_MA0485.1	1	1	+	9.201832196531285	10.761275770441346	GAACATAAATCAA
chr3	141015692	141015693	chr3:141015693:C:T	rs16851001	C	T	C	Hoxc9_MA0485.1	6	1	-	8.580375501631803	11.614581268141224	AGTCATGAATCAC
chr3	141077070	141077071	chr3:141077071:G:A	rs1042831296	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	141077085	141077086	chr3:141077086:C:T	rs1426964	C	T	C	Hoxc9_MA0485.1	4	1	-	7.5062489926572065	8.674012706648792	GGCCGTAACTCAC
chr3	141077109	141077110	chr3:141077110:G:T	rs77755755	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	141106021	141106022	chr3:141106022:T:C	rs146627432	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	141174852	141174853	chr3:141174853:T:C	rs1154784	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	141411445	141411446	chr3:141411446:A:T	rs140525378	A	T	A	Hoxc9_MA0485.1	9	1	-	7.763657023275037	3.936014454775012	CACTGTAAATCTC
chr3	141558183	141558184	chr3:141558184:C:T	rs80157048	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	141796707	141796708	chr3:141796708:T:C	rs16851809	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	141878355	141878356	chr3:141878356:C:G	rs112279069	C	G	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	141919061	141919062	chr3:141919062:T:C	rs74799291	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	142503003	142503004	chr3:142503004:G:A	rs76458322	G	A	A	Hoxc9_MA0485.1	4	1	+	8.500470313444696	9.668234027436279	TTCCGTAAATCAG
chr3	143100145	143100146	chr3:143100146:C:T	rs114896085	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	143152004	143152005	chr3:143152005:C:T	rs4428144	C	T	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	143266874	143266875	chr3:143266875:T:C	rs2289491	T	C	T	Hoxc9_MA0485.1	4	1	-	11.187763840993696	10.020000127002113	AGCCATAAATTAC
chr3	143418891	143418892	chr3:143418892:T:A	rs752964627	T	A	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	143514259	143514260	chr3:143514260:C:G	rs9869026	C	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	143752989	143752990	chr3:143752990:G:A	rs9881418	G	A	A	Hoxc9_MA0485.1	0	1	-	8.575458805512973	8.80780246303234	CTCAATAAATCAA
chr3	143810385	143810386	chr3:143810386:C:T	rs115271829	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	144032611	144032612	chr3:144032612:A:C	rs73874109	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	144181180	144181181	chr3:144181181:G:T	rs1550781	G	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	144407632	144407633	chr3:144407633:C:T	rs13059486	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	144530564	144530565	chr3:144530565:T:C	rs1613644	T	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	144560456	144560457	chr3:144560457:T:A	rs77427247	T	A	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	144630204	144630205	chr3:144630205:G:A	rs708479	G	A	A	Hoxc9_MA0485.1	1	1	+	7.588312012678523	6.028868438768462	AGCCATAAAACTG
chr3	144750833	144750834	chr3:144750834:A:C	rs116561564	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	144894707	144894708	chr3:144894708:C:T	rs59916282	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	144966976	144966977	chr3:144966977:T:A	rs9289687	T	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	144970387	144970388	chr3:144970388:G:T	rs13065774	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	144989938	144989939	chr3:144989939:A:G	rs62276260	A	G	A	Hoxc9_MA0485.1	4	1	+	10.541087849494724	9.373324135503141	GGTTATAAATCAG
chr3	144989959	144989960	chr3:144989960:C:A	rs34948596	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	145085830	145085831	chr3:145085831:T:C	rs7427321	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	145220840	145220841	chr3:145220841:G:A	rs1348658	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	145812455	145812456	chr3:145812456:G:A	rs2864425	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	146148958	146148959	chr3:146148959:A:G	rs7613150	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	146158218	146158219	chr3:146158219:G:A	rs74413309	G	A	G	Hoxc9_MA0485.1	1	1	-	9.764883696784846	8.82108385753998	GCCAGTAAATCAG
chr3	146274284	146274285	chr3:146274285:A:G	rs11929382	A	G	A	Hoxc9_MA0485.1	12	1	-	8.755274375425381	9.009271329189934	TTTCATAAATCAT
chr3	146641635	146641636	chr3:146641636:C:A	rs73159129	C	A	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	146739237	146739238	chr3:146739238:C:G	rs573500635	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	146739267	146739268	chr3:146739268:C:T	rs9810060	C	T	C	Hoxc9_MA0485.1	1	1	-	10.371029044825516	8.811585470915455	AGCAGTAAATCAG
chr3	146757171	146757172	chr3:146757172:G:C	rs147310276	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	146972427	146972428	chr3:146972428:T:C	rs7611207	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	147142015	147142016	chr3:147142016:A:G	rs41490247	A	G	A	Hoxc9_MA0485.1	12	1	+	9.003131149634207	9.128811506467677	GCCAATAAATTAA
chr3	147155211	147155212	chr3:147155212:T:G	rs1910107	T	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	147229552	147229553	chr3:147229553:T:C	rs9833001	T	C	-	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	147354469	147354470	chr3:147354470:C:A	rs112433248	C	A	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	147368480	147368481	chr3:147368481:T:C	rs1910466	T	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	147672717	147672718	chr3:147672718:G:A	rs7622746	G	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	147988873	147988874	chr3:147988874:G:A	rs149669221	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	148158439	148158440	chr3:148158440:C:A	rs75507217	C	A	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	148727514	148727515	chr3:148727515:C:T	rs12695898	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	148955683	148955684	chr3:148955684:G:A	rs113215357	G	A	G	Hoxc9_MA0485.1	10	1	-	10.077993873079217	8.274157968770465	AGCTGTAAATCTC
chr3	148956062	148956063	chr3:148956063:T:C	rs17783804	T	C	C	Hoxc9_MA0485.1	5	1	+	8.784417823871365	4.29910646123288	TGGAATAAATCAT
chr3	148956084	148956085	chr3:148956085:A:C	rs77226059	A	C	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	148956087	148956088	chr3:148956088:A:G	rs16861207	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	149348248	149348249	chr3:149348249:C:A	rs4681498	C	A	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	149395292	149395293	chr3:149395293:G:A	rs7429191	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	149473941	149473942	chr3:149473942:A:C	rs12152430	A	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr3	149908751	149908752	chr3:149908752:T:C	rs1350349	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	150014002	150014003	chr3:150014003:A:G	rs772303105	A	G	A	Hoxc9_MA0485.1	3	1	+	8.569985338824948	3.788340074409725	TCCAGTAAATCTC
chr3	150130139	150130140	chr3:150130140:G:A	rs13326757	G	A	G	Hoxc9_MA0485.1	3	1	-	9.248296558037032	8.360043785014408	TGCCGTAAATCCC
chr3	150249984	150249985	chr3:150249985:G:A	rs78421186	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	150278915	150278916	chr3:150278916:A:G	rs13095267	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	150300635	150300636	chr3:150300636:C:T	rs73160476	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	150369303	150369304	chr3:150369304:C:T	rs116041795	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	150463003	150463004	chr3:150463004:G:A	rs12629077	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	150867839	150867840	chr3:150867840:T:A	rs4680007	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr3	151535882	151535883	chr3:151535883:A:T	rs77897161	A	T	A	Hoxc9_MA0485.1	5	1	-	8.15684316045369	1.2583001847340953	AGCCATCAATTTC
chr3	151580770	151580771	chr3:151580771:T:G	rs144947120	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	151758725	151758726	chr3:151758726:A:G	rs9839054	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	151778039	151778040	chr3:151778040:C:T	rs62276069	C	T	T	Hoxc9_MA0485.1	2	1	+	11.852639263970774	10.475620786809552	ACCCATAAATCAC
chr3	151778069	151778070	chr3:151778070:T:C	rs12637762	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	151864799	151864800	chr3:151864800:G:C	rs140616383	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	152061494	152061495	chr3:152061495:A:G	rs1531604	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	152063878	152063879	chr3:152063879:C:T	rs9859806	C	T	C	Hoxc9_MA0485.1	0	1	-	9.592870331618004	9.060055198327001	GCCAATAAATTAT
chr3	152121635	152121636	chr3:152121636:G:A	rs646635	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	152121637	152121638	chr3:152121638:C:T	rs472976	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	152360257	152360258	chr3:152360258:A:G	rs75976846	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	152364593	152364594	chr3:152364594:G:A	rs1808751	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	152443671	152443672	chr3:152443672:T:C	rs17437043	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	152472531	152472532	chr3:152472532:C:T	rs16864316	C	T	T	Hoxc9_MA0485.1	11	1	+	8.192358833092964	9.387759302783023	AGCAGTAAATCCA
chr3	152636395	152636396	chr3:152636396:G:C	rs78643660	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	153131037	153131038	chr3:153131038:C:T	rs6803774	C	T	C	Hoxc9_MA0485.1	4	1	-	7.750936640443904	8.91870035443549	TGTCGTCAATCAC
chr3	153159542	153159543	chr3:153159543:A:G	rs78206890	A	G	A	Hoxc9_MA0485.1	11	1	+	10.770845132392875	6.3583117335245065	AGTCATAAATCAA
chr3	153625750	153625751	chr3:153625751:C:A	rs144406471	C	A	C	Hoxc9_MA0485.1	3	1	+	8.540769097146525	7.806017889576057	AACCATCAATCAG
chr3	153680791	153680792	chr3:153680792:A:G	rs1523283	A	G	a	Hoxc9_MA0485.1	4	1	+	7.660195464418936	6.492431750427351	CACCATCAATCAA
chr3	153680797	153680798	chr3:153680798:C:G	rs1523282	C	G	C	Hoxc9_MA0485.1	10	1	+	7.660195464418936	2.8591246566716584	CACCATCAATCAA
chr3	153753431	153753432	chr3:153753432:G:C	rs544280	G	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	153856038	153856039	chr3:153856039:A:C	rs6803060	A	C	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	153935637	153935638	chr3:153935638:T:C	rs10935960	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	154193205	154193206	chr3:154193206:C:T	rs400529	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	154690727	154690728	chr3:154690728:G:A	rs147101512	G	A	g	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	154975155	154975156	chr3:154975156:C:A	rs57409759	C	A	-	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	155106895	155106896	chr3:155106896:A:C	rs3773896	A	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	155335179	155335180	chr3:155335180:T:C	rs4560340	T	C	T	Hoxc9_MA0485.1	6	1	-	9.441921682762048	6.407715916252628	AGCTATAAATTTC
chr3	155428708	155428709	chr3:155428709:G:C	rs115640571	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	155739256	155739257	chr3:155739257:A:G	rs358749	A	G	A	Hoxc9_MA0485.1	12	1	+	9.387759302783023	9.513439659616493	AGCAGTAAATCTA
chr3	155748142	155748143	chr3:155748143:T:C	rs358741	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	155875232	155875233	chr3:155875233:T:C	rs113952331	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	156676188	156676189	chr3:156676189:C:T	rs115844714	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	157128850	157128851	chr3:157128851:T:C	rs57370275	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	157248503	157248504	chr3:157248504:C:G	rs74319750	C	G	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	157389192	157389193	chr3:157389193:A:G	rs1585080	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	157477669	157477670	chr3:157477670:T:C	rs7626974	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	157618798	157618799	chr3:157618799:A:T	rs9850567	A	T	A	Hoxc9_MA0485.1	0	1	+	8.78209801507676	8.25954839670201	AGCAGTAAATCCT
chr3	157660921	157660922	chr3:157660922:T:A	rs1553187	T	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr3	157793835	157793836	chr3:157793836:A:G	rs78872644	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	157793858	157793859	chr3:157793859:A:G	rs3845979	A	G	A	Hoxc9_MA0485.1	4	1	+	9.383821699943608	8.216057985952025	GTCCATAAATTAT
chr3	157927520	157927521	chr3:157927521:C:T	rs2885269	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	158058455	158058456	chr3:158058456:A:G	rs111850797	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr3	158093881	158093882	chr3:158093882:A:G	rs974548576	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr3	158165928	158165929	chr3:158165929:T:G	rs73874313	T	G	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	158404108	158404109	chr3:158404109:G:A	rs116577914	G	A	G	Hoxc9_MA0485.1	1	1	+	7.574786868801703	6.015343294891642	GGCCATGAATTTT
chr3	158775861	158775862	chr3:158775862:A:G	rs12497488	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	159124243	159124244	chr3:159124244:C:G	rs17726436	C	G	C	Hoxc9_MA0485.1	4	1	-	7.669809214718215	3.699646247460141	TGCAGTAAATCCA
chr3	159190405	159190406	chr3:159190406:C:T	rs556585464	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	159234522	159234523	chr3:159234523:G:A	rs1449021	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr3	159234525	159234526	chr3:159234526:C:A	rs1449022	C	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	159618895	159618896	chr3:159618896:G:A	rs75788005	G	A	g	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	159650858	159650859	chr3:159650859:A:G	chr3:159650859:A:G	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	159749888	159749889	chr3:159749889:A:G	rs4444756	A	G	A	Hoxc9_MA0485.1	3	1	-	8.55920433660065	9.447457109623276	GCCTATAAATAAT
chr3	159751465	159751466	chr3:159751466:T:C	rs532541212	T	C	T	Hoxc9_MA0485.1	4	1	-	10.132292852586605	8.964529138595022	TTCCATAAATCAT
chr3	159764672	159764673	chr3:159764673:G:A	rs151303599	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	160129530	160129531	chr3:160129531:C:T	rs76910189	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	160735625	160735626	chr3:160735626:G:A	rs980430	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	160878447	160878448	chr3:160878448:T:C	rs11922296	T	C	C	Hoxc9_MA0485.1	9	1	-	8.320221041054074	5.259637795180468	AGCCATAAAACAA
chr3	160947730	160947731	chr3:160947731:A:G	rs112335899	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	161101435	161101436	chr3:161101436:A:G	rs35474158	A	G	A	Hoxc9_MA0485.1	4	1	+	9.014432545662713	7.846668831671129	AGCCATCAATTAC
chr3	161308724	161308725	chr3:161308725:G:A	rs6809256	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	161338505	161338506	chr3:161338506:G:A	rs1036142192	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	161382881	161382882	chr3:161382882:T:C	rs459923	T	C	C	Hoxc9_MA0485.1	9	1	+	8.869312234872048	1.981086420498416	ACTTATAAATCAG
chr3	161409320	161409321	chr3:161409321:G:A	rs73162597	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	161440667	161440668	chr3:161440668:A:G	rs7633221	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	161631996	161631997	chr3:161631997:C:A	rs1399908	C	A	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	161793588	161793589	chr3:161793589:T:A	rs36024447	T	A	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	161802951	161802952	chr3:161802952:G:T	rs1436742	G	T	G	Hoxc9_MA0485.1	2	1	-	9.426384192804168	7.506981220400413	GACAATAAATTAC
chr3	162195313	162195314	chr3:162195314:C:T	rs13094424	C	T	C	Hoxc9_MA0485.1	2	1	+	7.983738764289211	6.6067202871279855	TGCCACAAATCAC
chr3	162218669	162218670	chr3:162218670:G:T	rs34819866	G	T	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	162218671	162218672	chr3:162218672:T:G	rs12636428	T	G	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	162365272	162365273	chr3:162365273:A:G	rs9863256	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	162365296	162365297	chr3:162365297:A:G	rs75165935	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	162400814	162400815	chr3:162400815:T:A	rs6775708	T	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	162599458	162599459	chr3:162599459:C:T	rs11717231	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	162600205	162600206	chr3:162600206:G:T	rs28784569	G	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	162699869	162699870	chr3:162699870:T:C	rs7615986	T	C	C	Hoxc9_MA0485.1	2	1	-	8.566950537443919	7.790469368126366	TCACATAAATCAA
chr3	162704781	162704782	chr3:162704782:T:G	rs12489679	T	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	162800064	162800065	chr3:162800065:C:T	rs185824186	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	162864875	162864876	chr3:162864876:T:C	rs12696170	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	162864907	162864908	chr3:162864908:A:G	rs12696171	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	163071270	163071271	chr3:163071271:T:C	rs13089621	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	163131568	163131569	chr3:163131569:T:C	rs9990207	T	C	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	163283340	163283341	chr3:163283341:A:G	rs1186539	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	163363527	163363528	chr3:163363528:T:C	rs7644478	T	C	C	Hoxc9_MA0485.1	4	1	-	9.974532314223115	8.806768600231532	AGCCATCAATCAA
chr3	164326937	164326938	chr3:164326938:A:G	rs6788855	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	164401476	164401477	chr3:164401477:A:G	rs9873142	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	164401489	164401490	chr3:164401490:C:A	rs9835558	C	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	165181698	165181699	chr3:165181699:T:C	rs9854819	T	C	T	Hoxc9_MA0485.1	9	1	+	8.061110969226467	1.172885154852834	TGTCATCAATCTC
chr3	165713161	165713162	chr3:165713162:T:G	rs645127	T	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	165864775	165864776	chr3:165864776:T:C	chr3:165864776:T:C	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	166029513	166029514	chr3:166029514:G:A	rs1584485	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	166029513	166029514	chr3:166029514:G:C	chr3:166029514:G:C	G	C	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	166565018	166565019	chr3:166565019:A:G	rs16850752	A	G	A	Hoxc9_MA0485.1	10	1	-	7.235267611646212	9.039103515954965	GGCCACAAATTAC
chr3	166754716	166754717	chr3:166754717:A:T	rs6800264	A	T	T	Hoxc9_MA0485.1	9	1	-	8.050556246872747	4.22291367837272	TCTAGTAAATCAC
chr3	167148534	167148535	chr3:167148535:C:T	rs76301291	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	167376677	167376678	chr3:167376678:A:G	rs13087122	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr3	167651340	167651341	chr3:167651341:A:G	rs2420024	A	G	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	167717202	167717203	chr3:167717203:A:T	rs78439970	A	T	A	Hoxc9_MA0485.1	7	1	+	9.785049793053748	4.589198584137173	TGCCATAAATAAC
chr3	168197453	168197454	chr3:168197454:C:T	rs62273338	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	168197455	168197456	chr3:168197456:T:C	rs3851392	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	169041685	169041686	chr3:169041686:T:C	rs147574826	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	169218081	169218082	chr3:169218082:C:T	rs1685642	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	169288879	169288880	chr3:169288880:T:C	rs13319341	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr3	169413327	169413328	chr3:169413328:C:T	rs58257080	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr3	169579544	169579545	chr3:169579545:C:G	rs16854110	C	G	C	Hoxc9_MA0485.1	12	1	+	8.655199441541157	7.937143662626279	GGGCATCAATCAC
chr3	169711858	169711859	chr3:169711859:T:C	rs35650714	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	169772721	169772722	chr3:169772722:T:C	rs75435018	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	169857044	169857045	chr3:169857045:G:A	rs76602717	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	170356609	170356610	chr3:170356610:G:C	rs1379936861	G	C	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	170356626	170356627	chr3:170356627:C:T	chr3:170356627:C:T	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	170469406	170469407	chr3:170469407:T:G	rs77033584	T	G	T	Hoxc9_MA0485.1	9	1	+	9.105658385198124	2.2174325708244935	GGTAATAAATCCT
chr3	170525430	170525431	chr3:170525431:T:G	rs12486404	T	G	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	170596729	170596730	chr3:170596730:T:C	rs112637120	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	171077413	171077414	chr3:171077414:A:G	rs12486818	A	G	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	171089433	171089434	chr3:171089434:A:G	rs114829508	A	G	A	Hoxc9_MA0485.1	4	1	+	8.213722411296326	7.04595869730474	TAGCATAAATCAC
chr3	171192242	171192243	chr3:171192243:G:T	rs55875765	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	171240045	171240046	chr3:171240046:T:C	rs57824131	T	C	T	Hoxc9_MA0485.1	12	1	-	9.700167262621415	9.825847619454885	AACTATAAATCAA
chr3	171307035	171307036	chr3:171307036:G:A	rs7650327	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr3	171363586	171363587	chr3:171363587:T:C	rs576294549	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr3	171447483	171447484	chr3:171447484:A:G	rs13314339	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	171447509	171447510	chr3:171447510:A:G	rs66483175	A	G	A	Hoxc9_MA0485.1	6	1	+	10.597918422268563	7.563712655759143	GTCCATAAATCAA
chr3	171548652	171548653	chr3:171548653:C:G	rs940138967	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	171746889	171746890	chr3:171746890:G:A	rs6445026	G	A	g	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	171790334	171790335	chr3:171790335:C:A	rs767373934	C	A	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr3	171802039	171802040	chr3:171802040:C:T	rs112496157	C	T	C	Hoxc9_MA0485.1	2	1	+	8.968645817458006	7.591627340296783	AGCAATGAATCAT
chr3	171814093	171814094	chr3:171814094:T:C	rs371438769	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	171851830	171851831	chr3:171851831:C:T	rs67067117	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	171876666	171876667	chr3:171876667:C:T	rs56312515	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr3	171883179	171883180	chr3:171883180:T:G	rs35729586	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	172074754	172074755	chr3:172074755:C:T	rs572835112	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	172074755	172074756	chr3:172074756:G:A	rs142039310	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	172126036	172126037	chr3:172126037:T:C	rs147332200	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	172173941	172173942	chr3:172173942:G:A	rs7653441	G	A	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	172173970	172173971	chr3:172173971:G:A	rs62283841	G	A	G	Hoxc9_MA0485.1	3	1	-	7.245981940211121	6.357729167188498	CCCCGTAAATAAC
chr3	172245926	172245927	chr3:172245927:C:T	rs1874259	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr3	172356170	172356171	chr3:172356171:G:A	rs525983	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	172396530	172396531	chr3:172396531:G:A	rs71310507	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	172423882	172423883	chr3:172423883:A:G	rs512721	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	172579195	172579196	chr3:172579196:A:C	rs11920548	A	C	A	Hoxc9_MA0485.1	5	1	-	10.108997826741634	3.2104548510220385	CCCAATAAATCAT
chr3	172740384	172740385	chr3:172740385:T:C	rs9874197	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr3	172867615	172867616	chr3:172867616:T:C	rs6805701	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	172905210	172905211	chr3:172905211:C:T	rs12629617	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	172905249	172905250	chr3:172905250:A:G	rs12634917	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	174218961	174218962	chr3:174218962:A:G	rs1421422	A	G	G	Hoxc9_MA0485.1	9	1	-	9.327512553364755	2.4392867389911235	GAACATAAATCAG
chr3	174242234	174242235	chr3:174242235:G:A	rs1188919343	G	A	G	Hoxc9_MA0485.1	12	1	+	9.959207116583388	9.833526759749917	CACCATAAATCAG
chr3	174289815	174289816	chr3:174289816:T:A	rs556678363	T	A	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	175084195	175084196	chr3:175084196:G:T	rs11915224	G	T	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	175084199	175084200	chr3:175084200:C:T	rs11915175	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	175151457	175151458	chr3:175151458:G:C	rs936479	G	C	G	Hoxc9_MA0485.1	10	1	-	9.135145841036818	4.334075033289541	GATAATAAATCAG
chr3	175151468	175151469	chr3:175151469:G:C	rs936478	G	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	175642778	175642779	chr3:175642779:T:C	rs2151614	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	175642799	175642800	chr3:175642800:G:C	rs67870879	G	C	C	Hoxc9_MA0485.1	4	1	+	6.759753462989808	2.7895904957317326	GGCCGCAAATCTT
chr3	176419824	176419825	chr3:176419825:C:T	rs4618229	C	T	-	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr3	176787735	176787736	chr3:176787736:T:A	rs6775882	T	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	176843154	176843155	chr3:176843155:G:A	rs75444093	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	176969080	176969081	chr3:176969081:A:T	rs1430529710	A	T	A	Hoxc9_MA0485.1	10	1	+	8.351809728584701	9.231974158149898	GGTCATAAATATT
chr3	177203120	177203121	chr3:177203121:C:G	rs11926518	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	177284045	177284046	chr3:177284046:G:A	rs58315913	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr3	177284095	177284096	chr3:177284096:G:A	rs59396532	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr3	177470592	177470593	chr3:177470593:T:C	rs56137967	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	177473646	177473647	chr3:177473647:G:A	rs187736130	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	177567961	177567962	chr3:177567962:T:G	rs80219964	T	G	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	177594102	177594103	chr3:177594103:C:G	rs73044488	C	G	G	Hoxc9_MA0485.1	11	1	-	8.223628706702456	10.583172250671744	GGCTATAAATCGC
chr3	177688275	177688276	chr3:177688276:A:G	rs6803889	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	177704042	177704043	chr3:177704043:A:G	rs34066617	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	177730637	177730638	chr3:177730638:C:G	rs9290625	C	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	177771354	177771355	chr3:177771355:C:A	rs146093400	C	A	C	Hoxc9_MA0485.1	3	1	+	8.430606360248698	7.695855152678228	TGTCATAAATTTC
chr3	178141110	178141111	chr3:178141111:G:A	rs6774415	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr3	178350972	178350973	chr3:178350973:G:A	rs57244264	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	178754973	178754974	chr3:178754974:G:A	rs74612618	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	178851916	178851917	chr3:178851917:A:G	rs7653581	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	178897345	178897346	chr3:178897346:G:T	rs180845540	G	T	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr3	178949306	178949307	chr3:178949307:G:A	rs7638121	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	179074451	179074452	chr3:179074452:G:A	rs73050055	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	179323970	179323971	chr3:179323971:G:C	rs73043413	G	C	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	179482994	179482995	chr3:179482995:C:T	rs73054707	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	179655011	179655012	chr3:179655012:A:G	rs9844049	A	G	A	Hoxc9_MA0485.1	11	1	+	8.851006566652606	4.438473167784237	ATCCATAAATTAT
chr3	179671669	179671670	chr3:179671670:T:C	rs73052579	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	179804843	179804844	chr3:179804844:T:C	rs1990740	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	179955958	179955959	chr3:179955959:A:T	rs13097399	A	T	a	Hoxc9_MA0485.1	24	0	-	0	0	.
chr3	179983570	179983571	chr3:179983571:C:T	rs73180003	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr3	180018553	180018554	chr3:180018554:C:T	rs7645574	C	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	181941570	181941571	chr3:181941571:C:T	rs1392340	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	182193721	182193722	chr3:182193722:G:A	rs80062275	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	182389296	182389297	chr3:182389297:A:G	rs16833098	A	G	A	Hoxc9_MA0485.1	4	1	+	10.038936104017322	8.87117239002574	AGTCATAAATCTG
chr3	182605740	182605741	chr3:182605741:G:A	rs36083760	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	182914063	182914064	chr3:182914064:T:C	rs181551200	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	182917556	182917557	chr3:182917557:G:T	rs1876755	G	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	183101759	183101760	chr3:183101760:T:C	rs147354256	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	183226493	183226494	chr3:183226494:C:T	rs4859159	C	T	T	Hoxc9_MA0485.1	12	1	+	9.300244418337044	9.046247464572492	CATCATAAATCAC
chr3	183386421	183386422	chr3:183386422:G:A	rs145353768	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	183386430	183386431	chr3:183386431:C:T	rs17216229	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	183725614	183725615	chr3:183725615:A:G	rs262976	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr3	183860115	183860116	chr3:183860116:G:A	rs6809370	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr3	184439353	184439354	chr3:184439354:C:G	rs4371544	C	G	C	Hoxc9_MA0485.1	1	1	-	7.716136846154945	6.577176364823271	GGCTGTGAATCAG
chr3	184440216	184440217	chr3:184440217:A:C	rs13065454	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	184530873	184530874	chr3:184530874:C:T	rs768326237	C	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	184572559	184572560	chr3:184572560:G:A	rs9862375	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	184594969	184594970	chr3:184594970:C:T	rs73188413	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	184642787	184642788	chr3:184642788:C:T	rs151186915	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	184647656	184647657	chr3:184647657:T:C	rs6780696	T	C	T	Hoxc9_MA0485.1	8	1	-	8.51128164130783	1.609323131172873	AGCCATCAATCCT
chr3	184648931	184648932	chr3:184648932:T:C	rs143318265	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	184648946	184648947	chr3:184648947:C:T	rs10937184	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	184757247	184757248	chr3:184757248:C:T	rs115381803	C	T	C	Hoxc9_MA0485.1	0	1	-	9.873022997418722	9.34020786412772	GGATATAAATCAA
chr3	184757248	184757249	chr3:184757249:G:A	rs4686396	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr3	184812520	184812521	chr3:184812521:G:A	rs759463244	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	185880763	185880764	chr3:185880764:T:C	rs12107951	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr3	186127672	186127673	chr3:186127673:T:C	rs78793054	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	186432844	186432845	chr3:186432845:G:C	rs6444130	G	C	t	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr3	186532728	186532729	chr3:186532729:G:A	rs746767489	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	186669989	186669990	chr3:186669990:A:G	rs3733008	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr3	186743000	186743001	chr3:186743001:A:G	chr3:186743001:A:G	A	G	a	Hoxc9_MA0485.1	23	0	+	0	0	.
chr3	186860754	186860755	chr3:186860755:G:A	rs62292800	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	186888495	186888496	chr3:186888496:A:G	rs9821232	A	G	A	Hoxc9_MA0485.1	5	1	-	8.893569059513165	4.40825769687468	AACAATAAATTAC
chr3	186916284	186916285	chr3:186916285:G:A	rs9876387	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr3	186968058	186968059	chr3:186968059:T:C	rs9852856	T	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr3	186980087	186980088	chr3:186980088:G:T	rs78949521	G	T	g	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	186992068	186992069	chr3:186992069:A:G	rs737509	A	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	187104840	187104841	chr3:187104841:G:A	rs849753	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr3	187104852	187104853	chr3:187104853:A:G	rs849752	A	G	A	Hoxc9_MA0485.1	11	1	+	8.522930717906014	4.110397319037646	CTTCATAAATCAT
chr3	187113214	187113215	chr3:187113215:G:T	rs56414173	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	187769737	187769738	chr3:187769738:C:T	rs10937321	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr3	187887526	187887527	chr3:187887527:C:T	rs6444265	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr3	187934165	187934166	chr3:187934166:C:G	rs570459	C	G	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr3	187946177	187946178	chr3:187946178:C:A	chr3:187946178:C:A	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr3	187946190	187946191	chr3:187946191:T:G	rs770991626	T	G	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	188126311	188126312	chr3:188126312:T:G	rs760779627	T	G	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr3	188183773	188183774	chr3:188183774:A:G	rs9863914	A	G	G	Hoxc9_MA0485.1	5	1	-	7.389785501429792	2.9044741387913073	GGCCATAAAACCT
chr3	188447041	188447042	chr3:188447042:T:G	rs9832613	T	G	G	Hoxc9_MA0485.1	8	1	-	9.039103515954965	4.188701344010305	GGCCACAAATCAC
chr3	188482708	188482709	chr3:188482709:T:A	rs74941116	T	A	T	Hoxc9_MA0485.1	7	1	-	9.75444448147212	4.558593272555548	TCCCATAAATCTG
chr3	188508570	188508571	chr3:188508571:A:G	rs10937349	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	188798370	188798371	chr3:188798371:A:G	rs4686995	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	188927342	188927343	chr3:188927343:G:A	rs144618954	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	189287028	189287029	chr3:189287029:C:T	rs9682650	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr3	189372491	189372492	chr3:189372492:C:T	rs62289730	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	189459008	189459009	chr3:189459009:G:A	rs6802310	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	189569101	189569102	chr3:189569102:G:A	rs7615734	G	A	g	Hoxc9_MA0485.1	0	1	+	8.42458712693758	7.891771993646578	GTCCATCAATCAA
chr3	189664265	189664266	chr3:189664266:C:G	rs114024501	C	G	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	189664293	189664294	chr3:189664294:G:A	rs10937404	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr3	189702255	189702256	chr3:189702256:C:G	rs113474469	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr3	189766718	189766719	chr3:189766719:T:C	rs11708278	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	189773348	189773349	chr3:189773349:A:C	rs62279933	A	C	A	Hoxc9_MA0485.1	3	1	+	8.950870044147761	9.68562125171823	GACAGTAAATCTT
chr3	189800610	189800611	chr3:189800611:G:A	rs78746958	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr3	189928225	189928226	chr3:189928226:A:G	rs73202034	A	G	A	Hoxc9_MA0485.1	4	1	+	9.959207116583388	8.791443402591804	CACCATAAATCAG
chr3	190004862	190004863	chr3:190004863:T:A	rs182907923	T	A	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr3	190044743	190044744	chr3:190044744:C:T	rs6444412	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr3	190069515	190069516	chr3:190069516:G:A	rs73053190	G	A	A	Hoxc9_MA0485.1	10	1	-	9.301447300939914	7.4976113966311635	TGCTGTAAATCTT
chr3	190133284	190133285	chr3:190133285:A:G	rs1002993	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	190239043	190239044	chr3:190239044:A:G	rs566747	A	G	G	Hoxc9_MA0485.1	9	1	-	7.293261357723319	0.4050355433496863	GGCTACAAATCTC
chr3	190678173	190678174	chr3:190678174:C:T	rs9828997	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	191124191	191124192	chr3:191124192:A:C	chr3:191124192:A:C	A	C	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr3	191124194	191124195	chr3:191124195:A:C	chr3:191124195:A:C	A	C	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	191146088	191146089	chr3:191146089:C:T	rs2168155	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr3	191161126	191161127	chr3:191161127:G:A	rs73199617	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	191192574	191192575	chr3:191192575:G:A	rs144412060	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr3	191192620	191192621	chr3:191192621:T:G	rs7617099	T	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	191291371	191291372	chr3:191291372:G:C	rs2117545	G	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	191296456	191296457	chr3:191296457:C:T	rs6769894	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	191330732	191330733	chr3:191330733:C:A	rs980320	C	A	C	Hoxc9_MA0485.1	1	1	-	8.118284966774606	6.035524646198069	GGCAATAAAACAA
chr3	191378169	191378170	chr3:191378170:G:T	rs186065	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	191385173	191385174	chr3:191385174:T:C	rs445914	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr3	191584866	191584867	chr3:191584867:T:G	rs6444565	T	G	G	Hoxc9_MA0485.1	8	1	-	8.268505577242417	3.4181034052977552	TCCTATCAATCAC
chr3	191584893	191584894	chr3:191584894:A:G	rs6444566	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	191781280	191781281	chr3:191781281:T:G	rs6792568	T	G	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr3	192060652	192060653	chr3:192060653:C:G	rs73887206	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr3	192367899	192367900	chr3:192367900:G:A	rs6444634	G	A	A	Hoxc9_MA0485.1	4	1	+	8.478709262344097	9.64647297633568	GGCCGTGAATCAA
chr3	192642043	192642044	chr3:192642044:C:G	rs1875735	C	G	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	192820523	192820524	chr3:192820524:T:C	rs6444663	T	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr3	192845196	192845197	chr3:192845197:G:A	rs73890341	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	192845429	192845430	chr3:192845430:T:C	rs9858084	T	C	t	Hoxc9_MA0485.1	21	0	+	0	0	.
chr3	193034815	193034816	chr3:193034816:C:T	rs13097127	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr3	193168957	193168958	chr3:193168958:G:C	rs12637945	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr3	193636165	193636166	chr3:193636166:G:A	rs6807435	G	A	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr3	193737521	193737522	chr3:193737522:T:C	rs1057435693	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr3	193777783	193777784	chr3:193777784:C:T	rs7610792	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr3	193979320	193979321	chr3:193979321:G:T	rs9855415	G	T	T	Hoxc9_MA0485.1	2	1	-	7.340108364285512	5.420705391881755	AGCAGTCAATCTG
chr3	194003473	194003474	chr3:194003474:A:C	rs890773168	A	C	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr3	194003474	194003475	chr3:194003475:G:T	rs1008337363	G	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	194003567	194003568	chr3:194003568:T:C	rs6444764	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr3	194043927	194043928	chr3:194043928:A:G	rs71635024	A	G	A	Hoxc9_MA0485.1	12	1	+	7.484827533928528	7.6105078907619985	GGCCATATATCAA
chr3	194137171	194137172	chr3:194137172:T:C	rs2368048	T	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr3	194205582	194205583	chr3:194205583:C:T	rs73891749	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr3	194213022	194213023	chr3:194213023:T:C	rs139676688	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	194213033	194213034	chr3:194213034:A:G	rs187239106	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr3	194221223	194221224	chr3:194221224:G:A	rs142427699	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr3	194226100	194226101	chr3:194226101:C:T	rs56196085	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr3	194323988	194323989	chr3:194323989:C:G	rs556896638	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	194326276	194326277	chr3:194326277:A:G	rs1051535716	A	G	a	Hoxc9_MA0485.1	8	1	+	9.65153859878069	2.749580088645729	TTCAATAAATCAC
chr3	194364317	194364318	chr3:194364318:G:A	rs923931	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr3	194365121	194365122	chr3:194365122:C:T	rs531236248	C	T	C	Hoxc9_MA0485.1	3	1	+	7.518592982924537	6.630340209901912	CGTCGTCAATCAC
chr3	194368143	194368144	chr3:194368144:A:C	rs6802406	A	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr3	194368154	194368155	chr3:194368155:C:G	rs6789051	C	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr3	194368181	194368182	chr3:194368182:C:T	rs6789147	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr3	194624114	194624115	chr3:194624115:G:A	rs73195053	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	194769170	194769171	chr3:194769171:C:G	rs151029506	C	G	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr3	195017493	195017494	chr3:195017494:T:A	rs2676918	T	A	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	195068302	195068303	chr3:195068303:G:A	rs2720930	G	A	A	Hoxc9_MA0485.1	2	1	-	11.396706235926755	10.019687758765532	GCCAATAAATCAT
chr3	195154410	195154411	chr3:195154411:A:G	rs62285221	A	G	G	Hoxc9_MA0485.1	2	1	+	10.870260698619227	10.093779529301672	GGAAATAAATCAC
chr3	195254101	195254102	chr3:195254102:C:G	rs11917438	C	G	C	Hoxc9_MA0485.1	0	1	+	10.379690209161776	11.667398618346898	CCCCATAAATCAG
chr3	195351396	195351397	chr3:195351397:G:A	rs10804414	G	A	g	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr3	195535469	195535470	chr3:195535470:G:A	rs823508	G	A	.	Hoxc9_MA0485.1	29	0	-	0	0	.
chr3	195557540	195557541	chr3:195557541:T:C	rs862063	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr3	195826312	195826313	chr3:195826313:A:T	rs3107745	A	T	N	Hoxc9_MA0485.1	20	0	+	0	0	.
chr3	195859396	195859397	chr3:195859397:C:A	rs944304900	C	A	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr3	196012547	196012548	chr3:196012548:G:A	rs78899567	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr3	196049865	196049866	chr3:196049866:A:C	rs17091378	A	C	A	Hoxc9_MA0485.1	8	1	+	9.76707287062187	4.916670698677213	GGCTGTAAATCTA
chr3	196054453	196054454	chr3:196054454:C:T	rs7645812	C	T	c	Hoxc9_MA0485.1	21	0	-	0	0	.
chr3	196081152	196081153	chr3:196081153:A:G	rs6763092	A	G	A	Hoxc9_MA0485.1	8	1	+	7.315397111283366	0.41343860114840597	GCCCATCAATCCA
chr3	196444060	196444061	chr3:196444061:G:A	rs7631203	G	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr3	196598528	196598529	chr3:196598529:A:G	rs4916436	A	G	A	Hoxc9_MA0485.1	5	1	-	10.622712580383652	6.137401217745168	TGCAATAAATCTT
chr3	196598552	196598553	chr3:196598553:C:T	rs6583327	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr3	197289868	197289869	chr3:197289869:C:T	rs382579	C	T	T	Hoxc9_MA0485.1	10	1	+	8.778001991418163	6.974166087109411	AAAAATAAATCAC
chr3	197302524	197302525	chr3:197302525:T:C	rs338220	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr3	197425939	197425940	chr3:197425940:A:G	rs9870382	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr3	197752238	197752239	chr3:197752239:G:A	rs60224134	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	51905	51906	chr4:51906:A:G	rs6829344	A	G	a	Hoxc9_MA0485.1	3	1	+	10.65821912608951	5.876573861674291	CGCAATAAATCAA
chr4	244853	244854	chr4:244854:A:C	rs1386881054	A	C	.	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	501568	501569	chr4:501569:T:G	chr4:501569:T:G	T	G	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	536425	536426	chr4:536426:G:A	rs56021036	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	536426	536427	chr4:536427:C:A	rs56121355	C	A	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	580870	580871	chr4:580871:C:T	rs10024575	C	T	T	Hoxc9_MA0485.1	4	1	-	8.483774884789105	9.65153859878069	TTCAGTAAATCAC
chr4	604235	604236	chr4:604236:A:G	rs72611197	A	G	A	Hoxc9_MA0485.1	9	1	-	8.765209964235058	1.8769841498614286	AGACATAAATCCT
chr4	688160	688161	chr4:688161:G:A	rs571679717	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	699707	699708	chr4:699708:A:G	rs4447815	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	849395	849396	chr4:849396:G:A	rs6964	G	A	g	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	924435	924436	chr4:924436:T:A	rs11723135	T	A	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	1288162	1288163	chr4:1288163:C:G	rs11247983	C	G	C	Hoxc9_MA0485.1	1	1	-	7.4043285293352765	6.2653680480036025	AGGCATCAATCAG
chr4	1330969	1330970	chr4:1330970:G:C	rs10012819	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	1512353	1512354	chr4:1512354:T:G	rs4254839	T	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	1531587	1531588	chr4:1531588:T:G	rs73065585	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	1565564	1565565	chr4:1565565:G:A	rs28527776	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	1593703	1593704	chr4:1593704:G:A	rs116605410	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	1870498	1870499	chr4:1870499:C:A	rs1328263047	C	A	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	2163213	2163214	chr4:2163214:C:A	rs618262	C	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	2300483	2300484	chr4:2300484:G:C	rs77182340	G	C	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	2773670	2773671	chr4:2773671:G:A	rs190931377	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	3258426	3258427	chr4:3258427:T:C	rs3025796	T	C	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	3365530	3365531	chr4:3365531:G:C	rs35494582	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	3659406	3659407	chr4:3659407:G:T	rs17203086	G	T	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	3659446	3659447	chr4:3659447:G:T	rs17809118	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	3937882	3937883	chr4:3937883:G:T	rs28503420	G	T	g	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	4028520	4028521	chr4:4028521:C:A	rs4974797	C	A	-	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	4047492	4047493	chr4:4047493:A:T	rs10937633	A	T	-	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	4047504	4047505	chr4:4047505:C:G	rs114533527	C	G	-	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	4192438	4192439	chr4:4192439:A:G	rs2920168	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	4205591	4205592	chr4:4205592:G:T	rs1991918	G	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	4492186	4492187	chr4:4492187:G:T	rs145682081	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	4641158	4641159	chr4:4641159:A:C	rs17706166	A	C	A	Hoxc9_MA0485.1	7	1	+	9.744216691773817	2.839987622568239	GATCATAAATCAA
chr4	4729408	4729409	chr4:4729409:G:A	rs6834412	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	4803726	4803727	chr4:4803727:G:A	rs13117653	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	4810531	4810532	chr4:4810532:G:A	rs551441220	G	A	G	Hoxc9_MA0485.1	3	1	-	9.49655160877479	8.608298835752167	AGACATAAATCTG
chr4	5163347	5163348	chr4:5163348:A:T	rs1077366	A	T	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	5165841	5165842	chr4:5165842:A:G	rs3806724	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	5407122	5407123	chr4:5407123:G:C	rs195118	G	C	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	5410376	5410377	chr4:5410377:T:A	rs115569896	T	A	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	5655866	5655867	chr4:5655867:G:A	rs78737139	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	5686941	5686942	chr4:5686942:T:G	rs10937660	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	5915127	5915128	chr4:5915128:A:G	rs116392195	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	6323057	6323058	chr4:6323058:T:C	rs3796398	T	C	T	Hoxc9_MA0485.1	4	1	-	7.4973981530052916	6.3296344390137085	CGCCACAAATCAT
chr4	6323075	6323076	chr4:6323076:T:C	rs3796400	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	6493871	6493872	chr4:6493872:T:C	rs62286089	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	7010130	7010131	chr4:7010131:C:G	rs2301820	C	G	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	7010164	7010165	chr4:7010165:C:A	rs2301821	C	A	c	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	7076912	7076913	chr4:7076913:G:A	rs73202178	G	A	G	Hoxc9_MA0485.1	6	1	-	7.5998346898754034	6.244441519668867	TGGCATCAATCAC
chr4	7150202	7150203	chr4:7150203:G:T	rs6810509	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	7158435	7158436	chr4:7158436:A:G	rs114456403	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr4	7633797	7633798	chr4:7633798:G:A	rs139801116	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	7633803	7633804	chr4:7633804:C:T	rs61650368	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	7635891	7635892	chr4:7635892:G:A	rs67644854	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	7635904	7635905	chr4:7635905:G:T	rs4689149	G	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	7642377	7642378	chr4:7642378:C:T	rs78369008	C	T	T	Hoxc9_MA0485.1	12	1	-	8.155371212274636	8.029690855441165	CACCATAAATTAG
chr4	7642385	7642386	chr4:7642386:T:C	rs55703108	T	C	T	Hoxc9_MA0485.1	4	1	-	8.155371212274636	6.987607498283054	CACCATAAATTAG
chr4	7776895	7776896	chr4:7776896:G:C	rs10516188	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	7933999	7934000	chr4:7934000:G:A	rs57868040	G	A	g	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	7944869	7944870	chr4:7944870:G:A	rs73214058	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	7961128	7961129	chr4:7961129:A:G	rs7356321	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	8010227	8010228	chr4:8010228:C:A	rs76025863	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr4	8018988	8018989	chr4:8018989:G:T	rs6827324	G	T	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	8207640	8207641	chr4:8207641:C:T	rs748964847	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	8220429	8220430	chr4:8220430:T:C	rs7660416	T	C	T	Hoxc9_MA0485.1	7	1	-	7.6335537685262596	0.7293246993206808	GCGTGTAAATCAC
chr4	8220441	8220442	chr4:8220442:C:G	rs10938698	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	8261687	8261688	chr4:8261688:T:G	rs7698121	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	8278564	8278565	chr4:8278565:G:A	rs781293997	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	8278603	8278604	chr4:8278604:C:T	rs5018092	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	8609800	8609801	chr4:8609801:T:C	rs11736030	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	9484737	9484738	chr4:9484738:A:G	rs9291469	A	G	N	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	9529184	9529185	chr4:9529185:G:A	rs9761430	G	A	g	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	9607306	9607307	chr4:9607307:T:G	rs4974855	T	G	g	Hoxc9_MA0485.1	5	1	+	7.75969669385314	0.861153718133546	TGCCGTAAATATC
chr4	9611286	9611287	chr4:9611287:C:A	rs13131004	C	A	c	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	9690238	9690239	chr4:9690239:A:T	rs11731648	A	T	N	Hoxc9_MA0485.1	9	1	-	8.168633978145918	4.340991409645894	ACTCATAAATCCT
chr4	9732392	9732393	chr4:9732393:G:C	rs527357615	G	C	g	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	9766965	9766966	chr4:9766966:T:C	rs12648522	T	C	t	Hoxc9_MA0485.1	11	1	-	7.9683174288603995	3.5557840299920302	GGCCATGAATTAG
chr4	9980058	9980059	chr4:9980059:C:T	rs4364264	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	9989033	9989034	chr4:9989034:C:A	rs66647240	C	A	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	10011548	10011549	chr4:10011549:T:G	rs6845554	T	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	10096699	10096700	chr4:10096700:G:A	rs893939701	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	10121590	10121591	chr4:10121591:C:T	rs79824251	C	T	c	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	10212535	10212536	chr4:10212536:A:G	rs728663	A	G	a	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	10244702	10244703	chr4:10244703:G:C	rs10010656	G	C	-	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	10297534	10297535	chr4:10297535:G:A	rs116147875	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	10575066	10575067	chr4:10575067:A:G	rs61795106	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	10587928	10587929	chr4:10587929:G:A	rs11934521	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	10982485	10982486	chr4:10982486:G:A	rs34726783	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	11224060	11224061	chr4:11224061:C:G	rs62295110	C	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	11229182	11229183	chr4:11229183:T:C	rs13107238	T	C	T	Hoxc9_MA0485.1	8	1	-	7.935666531410651	1.0337080212756908	CCCAATCAATCAT
chr4	11355301	11355302	chr4:11355302:C:T	rs4697877	C	T	c	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	11355340	11355341	chr4:11355341:C:T	rs62298088	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	11372671	11372672	chr4:11372672:T:A	rs62298091	T	A	t	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	11505427	11505428	chr4:11505428:T:G	rs6847037	T	G	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	11506535	11506536	chr4:11506536:G:T	rs10939329	G	T	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	11514911	11514912	chr4:11514912:G:A	rs17316584	G	A	A	Hoxc9_MA0485.1	4	1	+	7.655002834780556	8.82276654877214	CGGCGTAAATCAG
chr4	11543543	11543544	chr4:11543544:A:G	rs76120438	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	11551429	11551430	chr4:11551430:G:A	rs13148596	G	A	a	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	11611944	11611945	chr4:11611945:T:C	rs6448796	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	12703258	12703259	chr4:12703259:C:G	rs34556472	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	12703263	12703264	chr4:12703264:G:A	rs34330035	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	12707612	12707613	chr4:12707613:G:A	rs78218854	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	12785066	12785067	chr4:12785067:T:C	rs12504146	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	12785073	12785074	chr4:12785074:C:G	rs12499410	C	G	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	13031743	13031744	chr4:13031744:T:C	rs977032	T	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	13144421	13144422	chr4:13144422:C:A	rs531347	C	A	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	13597521	13597522	chr4:13597522:A:G	rs149217877	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	13641290	13641291	chr4:13641291:T:C	rs186261542	T	C	T	Hoxc9_MA0485.1	4	1	-	10.330068219043337	9.162304505051754	GTCCATAAATCTT
chr4	13750808	13750809	chr4:13750809:G:A	rs76805619	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	14035427	14035428	chr4:14035428:C:G	rs35006804	C	G	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	14215231	14215232	chr4:14215232:C:T	rs2912195	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	14215277	14215278	chr4:14215278:A:G	rs7654783	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	14219245	14219246	chr4:14219246:A:G	rs79976102	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	14219430	14219431	chr4:14219431:T:C	rs16889857	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	14376073	14376074	chr4:14376074:G:C	chr4:14376074:G:C	G	C	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	14547378	14547379	chr4:14547379:T:C	rs184182376	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	14596207	14596208	chr4:14596208:C:T	rs1501157	C	T	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	14695684	14695685	chr4:14695685:T:G	rs115541604	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	14836128	14836129	chr4:14836129:C:T	rs10939597	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	14836149	14836150	chr4:14836150:T:A	rs79276692	T	A	T	Hoxc9_MA0485.1	5	1	+	8.701290859490996	1.8027478837714028	AGCTATAAATAAG
chr4	14836152	14836153	chr4:14836153:A:G	rs571314584	A	G	A	Hoxc9_MA0485.1	8	1	+	8.701290859490996	1.799332349356038	AGCTATAAATAAG
chr4	15355204	15355205	chr4:15355205:G:A	rs969607486	G	A	G	Hoxc9_MA0485.1	4	1	+	9.953471454943456	11.121235168935039	GACCGTAAATCAA
chr4	15400336	15400337	chr4:15400337:G:A	rs7665294	G	A	A	Hoxc9_MA0485.1	1	1	+	10.373975870851593	8.814532296941533	TGTCATAAATCAG
chr4	15443908	15443909	chr4:15443909:C:T	rs2314590	C	T	C	Hoxc9_MA0485.1	4	1	-	8.589801293903088	9.757565007894673	ACTCGTAAATCAG
chr4	15468164	15468165	chr4:15468165:A:T	rs11942959	A	T	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	15914013	15914014	chr4:15914014:G:A	rs61351267	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	15957077	15957078	chr4:15957078:G:T	rs4698430	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	16030188	16030189	chr4:16030189:G:T	rs885289	G	T	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	16030193	16030194	chr4:16030194:C:T	rs146524567	C	T	C	Hoxc9_MA0485.1	3	1	+	8.898106703277703	8.00985393025508	TACCGTAAATCAA
chr4	16031710	16031711	chr4:16031711:A:G	rs74469759	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	16083734	16083735	chr4:16083735:A:G	rs7692760	A	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	16095065	16095066	chr4:16095066:T:C	rs2099919	T	C	t	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	16112265	16112266	chr4:16112266:C:T	rs1712493	C	T	c	Hoxc9_MA0485.1	4	1	-	10.797207590691805	11.964971304683388	GACCGTAAATCAC
chr4	16196754	16196755	chr4:16196755:A:G	rs10939652	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	16232113	16232114	chr4:16232114:G:T	rs80187011	G	T	G	Hoxc9_MA0485.1	2	1	-	9.57284820385803	7.653445231454273	AGCAATAAATAAC
chr4	16388321	16388322	chr4:16388322:C:A	rs6851112	C	A	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	16693896	16693897	chr4:16693897:C:T	rs76678586	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr4	16940356	16940357	chr4:16940357:A:G	rs12108202	A	G	A	Hoxc9_MA0485.1	4	1	+	10.583172250671744	9.415408536680161	GGCTATAAATCCC
chr4	17068901	17068902	chr4:17068902:T:A	rs28408225	T	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	17068902	17068903	chr4:17068903:A:G	rs28455966	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	17153167	17153168	chr4:17153168:C:G	rs580863	C	G	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	17726317	17726318	chr4:17726318:G:A	rs4631043	G	A	a	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	17766084	17766085	chr4:17766085:G:A	rs117958753	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	18020059	18020060	chr4:18020060:G:A	rs73100949	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	18881161	18881162	chr4:18881162:C:T	rs75849215	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	19248809	19248810	chr4:19248810:C:G	rs312364	C	G	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	19260627	19260628	chr4:19260628:C:T	rs312353	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	19381223	19381224	chr4:19381224:T:C	rs6829605	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	19797073	19797074	chr4:19797074:A:G	rs78798194	A	G	A	Hoxc9_MA0485.1	0	1	-	8.377426004310898	8.14508234679153	TCTCATAAATCTG
chr4	19804107	19804108	chr4:19804108:A:G	rs4552457	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	19831658	19831659	chr4:19831659:T:C	rs73236220	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	20307814	20307815	chr4:20307815:G:A	rs35547264	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	20754383	20754384	chr4:20754384:G:A	rs2291530	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	20848137	20848138	chr4:20848138:A:G	rs11735642	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	20868177	20868178	chr4:20868178:C:T	rs1583425	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	21096201	21096202	chr4:21096202:T:C	rs12499834	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	21342515	21342516	chr4:21342516:A:C	rs16870878	A	C	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	21750147	21750148	chr4:21750148:C:T	rs6838195	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	21890564	21890565	chr4:21890565:G:C	rs1513566	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	22088377	22088378	chr4:22088378:C:T	rs2323310	C	T	T	Hoxc9_MA0485.1	12	1	+	8.94032566139018	8.686328707625627	TGCCATTAATCAC
chr4	22108290	22108291	chr4:22108291:G:C	rs6818210	G	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	23286438	23286439	chr4:23286439:T:C	rs7677347	T	C	C	Hoxc9_MA0485.1	4	1	-	9.014363914825388	7.846600200833806	AGACATAAATTAT
chr4	23412859	23412860	chr4:23412860:A:G	rs13105782	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	23663736	23663737	chr4:23663737:G:C	rs1243596784	G	C	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	24057982	24057983	chr4:24057983:G:A	rs17789830	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	24144551	24144552	chr4:24144552:G:A	rs1268662	G	A	g	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	24405562	24405563	chr4:24405563:G:T	rs544490467	G	T	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	24687321	24687322	chr4:24687322:A:G	rs181627911	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	24687326	24687327	chr4:24687327:C:A	rs74759055	C	A	C	Hoxc9_MA0485.1	3	1	+	8.507512495004008	7.772761287433538	GCCCATGAATCAA
chr4	24908812	24908813	chr4:24908813:T:G	rs35897466	T	G	T	Hoxc9_MA0485.1	7	1	-	9.225927857191973	2.321698787986395	AGCAATCAATCTC
chr4	25637113	25637114	chr4:25637114:T:G	rs10517077	T	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	25767992	25767993	chr4:25767993:T:G	rs367677331	T	G	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	25770836	25770837	chr4:25770837:G:C	rs7653919	G	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	25783538	25783539	chr4:25783539:C:A	rs10020147	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	25880287	25880288	chr4:25880288:G:T	rs76734317	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	25956295	25956296	chr4:25956296:C:T	rs9291478	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	25974921	25974922	chr4:25974922:C:T	rs10006741	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	26060508	26060509	chr4:26060509:A:G	rs7661937	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	26064011	26064012	chr4:26064012:C:G	rs12512454	C	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	26184371	26184372	chr4:26184372:G:A	rs73245722	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	26400564	26400565	chr4:26400565:A:G	rs11726853	A	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	26484126	26484127	chr4:26484127:T:C	rs73810951	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	26508830	26508831	chr4:26508831:A:G	rs6811280	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	26624337	26624338	chr4:26624338:C:T	rs114396570	C	T	C	Hoxc9_MA0485.1	0	1	-	8.853036174345075	8.320221041054074	GGCCATAAAACAA
chr4	27173520	27173521	chr4:27173521:C:T	rs111761610	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	27981934	27981935	chr4:27981935:G:A	rs2871304	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	28212371	28212372	chr4:28212372:T:A	rs1497718	T	A	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	28350687	28350688	chr4:28350688:A:C	rs982311473	A	C	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	28378589	28378590	chr4:28378590:T:C	rs1397439	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	28557071	28557072	chr4:28557072:C:T	rs12509692	C	T	c	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	28772273	28772274	chr4:28772274:G:T	rs116060847	G	T	G	Hoxc9_MA0485.1	2	1	+	7.794324970362719	9.113190634922805	GGGCATGAATCAC
chr4	29310364	29310365	chr4:29310365:G:A	rs1975255	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	30349198	30349199	chr4:30349199:T:C	rs558245951	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	30462170	30462171	chr4:30462171:T:C	rs28667877	T	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	30612905	30612906	chr4:30612906:T:C	rs67205679	T	C	T	Hoxc9_MA0485.1	3	1	+	8.462995857729732	9.351248630752357	GCCTATGAATCAC
chr4	30803346	30803347	chr4:30803347:A:C	rs9654124	A	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	31047608	31047609	chr4:31047609:T:C	rs6811512	T	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	31047641	31047642	chr4:31047642:T:C	rs61794078	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	31341743	31341744	chr4:31341744:C:G	rs77856134	C	G	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	31341781	31341782	chr4:31341782:G:T	rs73110984	G	T	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	32184974	32184975	chr4:32184975:A:G	rs4348145	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	32463226	32463227	chr4:32463227:G:A	chr4:32463227:G:A	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr4	32570153	32570154	chr4:32570154:A:G	rs17335936	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	32790604	32790605	chr4:32790605:A:T	rs61792787	A	T	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	33722418	33722419	chr4:33722419:G:A	rs138496733	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	35253793	35253794	chr4:35253794:G:A	rs4273488	G	A	G	Hoxc9_MA0485.1	0	1	+	10.152204919704348	9.619389786413345	GGAAATAAATCAG
chr4	35542013	35542014	chr4:35542014:A:T	rs113344619	A	T	-	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	35737071	35737072	chr4:35737072:G:A	rs7690983	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	36308492	36308493	chr4:36308493:A:G	chr4:36308493:A:G	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	36571058	36571059	chr4:36571059:A:G	rs11935437	A	G	G	Hoxc9_MA0485.1	0	1	-	9.56929750416514	9.336953846645773	TGCTGTAAATCAA
chr4	36613562	36613563	chr4:36613563:G:C	rs11096819	G	C	G	Hoxc9_MA0485.1	1	1	-	8.12838691813594	9.267347399467614	CCTAATAAATCTC
chr4	36676849	36676850	chr4:36676850:G:C	chr4:36676850:G:C	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	36676854	36676855	chr4:36676855:T:C	chr4:36676855:T:C	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	36677703	36677704	chr4:36677704:T:C	rs4833153	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	36760876	36760877	chr4:36760877:C:G	rs35070397	C	G	g	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	36792374	36792375	chr4:36792375:T:C	rs56084160	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	37157687	37157688	chr4:37157688:T:C	rs114878167	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	37442128	37442129	chr4:37442129:C:A	rs79220681	C	A	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	37474382	37474383	chr4:37474383:A:T	rs78375878	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	37721571	37721572	chr4:37721572:A:G	rs114611231	A	G	A	Hoxc9_MA0485.1	5	1	-	8.410665246639581	3.9253538840010966	GTACATAAATCTT
chr4	37748883	37748884	chr4:37748884:A:C	rs372485137	A	C	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	37763303	37763304	chr4:37763304:C:T	rs17606048	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	37910016	37910017	chr4:37910017:A:G	rs2925952	A	G	G	Hoxc9_MA0485.1	11	1	-	7.663668734406874	6.468268264716817	GGTAATCAATCTG
chr4	37989411	37989412	chr4:37989412:C:T	rs114177626	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	38223405	38223406	chr4:38223406:T:C	rs10025453	T	C	T	Hoxc9_MA0485.1	5	1	+	8.897133443490732	4.4118220808522475	ACTAATAAATCAA
chr4	38253604	38253605	chr4:38253605:A:G	rs60952194	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	38577070	38577071	chr4:38577071:G:C	rs6829317	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	38674902	38674903	chr4:38674903:C:T	rs75067561	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	38675673	38675674	chr4:38675674:T:A	rs16994705	T	A	T	Hoxc9_MA0485.1	7	1	-	10.778163821283048	5.582312612366475	GGCAGTAAATCAA
chr4	38739265	38739266	chr4:38739266:T:C	rs6823941	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	38922653	38922654	chr4:38922654:C:T	rs12509328	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	39062505	39062506	chr4:39062506:G:C	rs2711942	G	C	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	39062541	39062542	chr4:39062542:A:C	rs2711941	A	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	39178796	39178797	chr4:39178797:T:G	rs1451821	T	G	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	39718027	39718028	chr4:39718028:A:G	rs146079364	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	40150286	40150287	chr4:40150287:A:G	rs1714384	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	40150291	40150292	chr4:40150292:C:T	rs1714383	C	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	40193916	40193917	chr4:40193917:G:T	rs4974972	G	T	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	40241736	40241737	chr4:40241737:T:G	rs111260702	T	G	G	Hoxc9_MA0485.1	5	1	+	9.734956854508347	2.836413878788755	AGCAATAAATTAG
chr4	40241753	40241754	chr4:40241754:G:A	rs116525256	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	40303047	40303048	chr4:40303048:G:A	rs76565346	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	40328540	40328541	chr4:40328541:G:C	rs4512036	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	40364518	40364519	chr4:40364519:A:T	rs7677455	A	T	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	40607435	40607436	chr4:40607436:G:A	rs1231591034	G	A	G	Hoxc9_MA0485.1	12	1	-	7.261509837071716	7.007512883307165	AGGCATGAATCAC
chr4	40621757	40621758	chr4:40621758:T:G	chr4:40621758:T:G	T	G	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	40621780	40621781	chr4:40621781:T:C	rs143650391	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	40723208	40723209	chr4:40723209:C:G	rs146290126	C	G	c	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	40849031	40849032	chr4:40849032:T:C	rs4861068	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	40872620	40872621	chr4:40872621:T:C	rs61705773	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	40962470	40962471	chr4:40962471:T:C	rs62410355	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	41064902	41064903	chr4:41064903:G:A	rs28431187	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	41320348	41320349	chr4:41320349:A:G	rs73232175	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	41320380	41320381	chr4:41320381:G:A	rs6838610	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	41363283	41363284	chr4:41363284:G:C	rs6447062	G	C	g	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	41414580	41414581	chr4:41414581:C:T	rs7349673	C	T	C	Hoxc9_MA0485.1	3	1	+	8.7393747326185	7.85112195959588	GACCGTAAATTAT
chr4	41524485	41524486	chr4:41524486:C:T	rs4266323	C	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	42267089	42267090	chr4:42267090:C:G	rs1843924	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	42399042	42399043	chr4:42399043:G:C	rs3103221	G	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr4	42610791	42610792	chr4:42610792:A:C	rs7693893	A	C	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	42845674	42845675	chr4:42845675:C:T	rs10938222	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	42845675	42845676	chr4:42845676:A:G	rs77358243	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	43533438	43533439	chr4:43533439:G:A	rs13133395	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	44150024	44150025	chr4:44150025:G:A	rs62304791	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	44272696	44272697	chr4:44272697:A:G	rs62304820	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	44662456	44662457	chr4:44662457:C:G	rs72624165	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	44695095	44695096	chr4:44695096:G:A	rs144059974	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	44845567	44845568	chr4:44845568:T:A	rs78108172	T	A	T	Hoxc9_MA0485.1	12	1	+	8.94123411275005	8.351494930766254	CCCAGTAAATCAT
chr4	44905877	44905878	chr4:44905878:T:C	rs59879302	T	C	T	Hoxc9_MA0485.1	8	1	-	8.53433595539161	1.63237744525665	GAGAATAAATCAC
chr4	45028969	45028970	chr4:45028970:C:G	rs11941061	C	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	45055409	45055410	chr4:45055410:C:A	rs62411640	C	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	45101128	45101129	chr4:45101129:G:T	rs74417022	G	T	G	Hoxc9_MA0485.1	10	1	-	10.622712580383652	7.938712246509704	TGCAATAAATCTT
chr4	45122617	45122618	chr4:45122618:G:A	rs62409627	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	45151989	45151990	chr4:45151990:T:C	rs11734406	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	45485013	45485014	chr4:45485014:C:T	rs75172438	C	T	C	Hoxc9_MA0485.1	10	1	+	8.82108385753998	7.017247953231229	GTCAGTAAATCAG
chr4	45688415	45688416	chr4:45688416:G:A	rs1563480	G	A	G	Hoxc9_MA0485.1	12	1	+	7.862319722716925	7.7366393658834545	AGTCATGAATCAG
chr4	45835944	45835945	chr4:45835945:G:C	rs12650609	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	45865780	45865781	chr4:45865781:A:T	rs11732444	A	T	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr4	45865817	45865818	chr4:45865818:C:T	rs36083938	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	46236760	46236761	chr4:46236761:A:G	rs561779	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	46286203	46286204	chr4:46286204:T:A	rs575048	T	A	A	Hoxc9_MA0485.1	7	1	-	10.08956354335892	4.893712334442348	GGTCATAAATTAT
chr4	46707816	46707817	chr4:46707817:C:T	rs115714028	C	T	c	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr4	46896415	46896416	chr4:46896416:A:C	rs7678824	A	C	A	Hoxc9_MA0485.1	8	1	+	8.796301631718725	3.9458994597740666	TGCAATAAATAAT
chr4	47223910	47223911	chr4:47223911:C:T	rs1470208	C	T	T	Hoxc9_MA0485.1	3	1	+	9.095481783225777	8.207229010203154	TCTCATAAATCTC
chr4	47490095	47490096	chr4:47490096:T:G	rs10938488	T	G	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	47510858	47510859	chr4:47510859:A:G	rs4337705	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	48259155	48259156	chr4:48259156:T:C	rs1472973	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	48268566	48268567	chr4:48268567:T:C	rs12651507	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	48333839	48333840	chr4:48333840:A:G	rs16861203	A	G	a	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	48488992	48488993	chr4:48488993:A:G	rs3811759	A	G	G	Hoxc9_MA0485.1	3	1	-	8.376516607572976	9.264769380595599	GGCTATAAATATG
chr4	48652182	48652183	chr4:48652183:G:A	rs149748620	G	A	G	Hoxc9_MA0485.1	12	1	+	8.978716531178545	8.853036174345075	GGCCATAAAACAG
chr4	48779153	48779154	chr4:48779154:A:C	rs1022391143	A	C	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	48844833	48844834	chr4:48844834:C:G	rs56098760	C	G	C	Hoxc9_MA0485.1	2	1	+	8.599593112238876	5.903708970517566	TACTGTAAATCAT
chr4	49554873	49554874	chr4:49554874:G:A	rs76559137	G	A	.	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	52235962	52235963	chr4:52235963:C:A	chr4:52235963:C:A	C	A	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	52847556	52847557	chr4:52847557:A:G	rs187534494	A	G	A	Hoxc9_MA0485.1	4	1	+	8.526232314734585	7.358468600743003	GTCCATAAATTTT
chr4	52969186	52969187	chr4:52969187:C:T	rs12512878	C	T	C	Hoxc9_MA0485.1	11	1	+	8.779336346362992	9.974736816053051	GGCTATAAATTCC
chr4	53476683	53476684	chr4:53476684:G:A	chr4:53476684:G:A	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	53591693	53591694	chr4:53591694:A:G	rs7691817	A	G	G	Hoxc9_MA0485.1	6	1	+	8.480429305081671	5.446223538572251	ACAAATAAATCAG
chr4	53616964	53616965	chr4:53616965:C:T	rs2668554	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	53684006	53684007	chr4:53684007:T:C	rs62323682	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	53785043	53785044	chr4:53785044:T:G	rs60681996	T	G	T	Hoxc9_MA0485.1	7	1	-	8.242725748682057	1.3384966794764788	AGGCATAAATCCC
chr4	53935381	53935382	chr4:53935382:A:G	rs17083718	A	G	a	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	53988209	53988210	chr4:53988210:C:A	rs13134590	C	A	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	53998099	53998100	chr4:53998100:A:G	rs539703047	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	54120717	54120718	chr4:54120718:T:C	rs4864841	T	C	t	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	54120744	54120745	chr4:54120745:T:C	rs6850083	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	54232873	54232874	chr4:54232874:C:A	rs4635872	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	54483227	54483228	chr4:54483228:A:G	rs1507956	A	G	a	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	54660753	54660754	chr4:54660754:G:T	rs3819389	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	54781695	54781696	chr4:54781696:A:G	rs138655328	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	55437619	55437620	chr4:55437620:T:C	rs17721215	T	C	T	Hoxc9_MA0485.1	8	1	-	8.952419433086346	2.050460922951385	GCTTGTAAATCAC
chr4	55475129	55475130	chr4:55475130:C:G	rs11133387	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	55544620	55544621	chr4:55544621:T:C	rs7667741	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	56226479	56226480	chr4:56226480:A:T	rs753255	A	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	56529136	56529137	chr4:56529137:G:A	rs77485576	G	A	G	Hoxc9_MA0485.1	2	1	-	7.998783376030302	6.621764898869077	GCCCTTAAATCAG
chr4	56606591	56606592	chr4:56606592:T:G	rs73821519	T	G	T	Hoxc9_MA0485.1	0	1	+	7.374584869134889	8.429949620800643	TCCAGTAAATCCC
chr4	56620097	56620098	chr4:56620098:C:T	rs559412856	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	56690464	56690465	chr4:56690465:T:C	rs720429	T	C	t	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	56690501	56690502	chr4:56690502:T:C	rs720430	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	56756201	56756202	chr4:56756202:T:C	rs6554380	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	56914435	56914436	chr4:56914436:T:G	rs6838948	T	G	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	57080944	57080945	chr4:57080945:A:G	rs10019698	A	G	A	Hoxc9_MA0485.1	8	1	+	7.977515239560547	1.0755567294255874	GCTCATCAATCTC
chr4	57191351	57191352	chr4:57191352:C:A	rs73242671	C	A	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	57465894	57465895	chr4:57465895:G:T	rs1441067	G	T	g	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	57491480	57491481	chr4:57491481:A:T	rs114870115	A	T	A	Hoxc9_MA0485.1	5	1	-	10.716759133167072	3.818216157447476	GGATATAAATCAC
chr4	57495005	57495006	chr4:57495006:C:T	rs182406098	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	57502379	57502380	chr4:57502380:A:T	rs34654155	A	T	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	57705357	57705358	chr4:57705358:A:T	rs35072593	A	T	A	Hoxc9_MA0485.1	9	1	-	8.114418958977929	4.286776390477905	CCTTATAAATCAG
chr4	57705378	57705379	chr4:57705379:A:G	rs34606769	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	58646304	58646305	chr4:58646305:A:T	rs17089520	A	T	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	58765584	58765585	chr4:58765585:C:T	rs2044706	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	58811752	58811753	chr4:58811753:C:A	rs2029103	C	A	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	59174921	59174922	chr4:59174922:T:A	rs11732027	T	A	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	59198367	59198368	chr4:59198368:C:T	rs2134434	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	59360298	59360299	chr4:59360299:C:T	rs10049657	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	59635426	59635427	chr4:59635427:A:G	rs73202979	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	59945462	59945463	chr4:59945463:A:G	rs144407218	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	60517115	60517116	chr4:60517116:C:T	rs28629360	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	61203216	61203217	chr4:61203217:C:T	rs557529249	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	61309790	61309791	chr4:61309791:A:G	rs575267329	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	61820294	61820295	chr4:61820295:T:C	rs6829758	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	62592309	62592310	chr4:62592310:G:T	rs13124757	G	T	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	62647485	62647486	chr4:62647486:T:A	rs72643916	T	A	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	62647497	62647498	chr4:62647498:T:C	rs34514835	T	C	T	Hoxc9_MA0485.1	4	1	-	9.056820170944613	7.889056456953029	GAAAATAAATCAT
chr4	62797542	62797543	chr4:62797543:A:G	rs6813649	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	62900017	62900018	chr4:62900018:C:T	rs11131417	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	63795571	63795572	chr4:63795572:C:T	rs2347823	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	63799256	63799257	chr4:63799257:C:A	rs62301915	C	A	c	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	64490250	64490251	chr4:64490251:T:C	rs11734926	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	64490251	64490252	chr4:64490252:A:T	rs11733996	A	T	A	Hoxc9_MA0485.1	12	1	-	8.667014618551192	8.077275436567396	GGACATAAATAAT
chr4	65096393	65096394	chr4:65096394:C:T	rs2349417	C	T	.	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	65508316	65508317	chr4:65508317:A:G	rs58710076	A	G	A	Hoxc9_MA0485.1	8	1	+	8.815144252005851	1.9131857418708917	AGCTATGAATCAT
chr4	65522688	65522689	chr4:65522689:G:A	rs7676872	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	65525773	65525774	chr4:65525774:C:T	rs4626262	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	66086898	66086899	chr4:66086899:T:G	rs72639056	T	G	-	Hoxc9_MA0485.1	11	1	+	8.427553297481284	4.872609283821938	GTCAGTAAATCTT
chr4	66275296	66275297	chr4:66275297:G:C	rs1397753	G	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	66276972	66276973	chr4:66276973:G:T	rs67857601	G	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	66490940	66490941	chr4:66490941:G:A	rs1512961	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	66490956	66490957	chr4:66490957:C:T	rs116306071	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	66656869	66656870	chr4:66656870:A:G	rs62306160	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	66797756	66797757	chr4:66797757:C:G	rs1450034	C	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	66797775	66797776	chr4:66797776:T:G	rs17792143	T	G	T	Hoxc9_MA0485.1	0	1	-	8.877367469299324	8.122474193405205	AGCAATAAATTTG
chr4	67235662	67235663	chr4:67235663:T:C	rs62315524	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	67580702	67580703	chr4:67580703:T:C	rs3775870	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	67895979	67895980	chr4:67895980:G:A	rs6552127	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	68119958	68119959	chr4:68119959:A:G	rs13135438	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	68360949	68360950	chr4:68360950:C:T	rs34419508	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	68379250	68379251	chr4:68379251:T:C	rs34223548	T	C	c	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	68405021	68405022	chr4:68405022:C:T	rs62317489	C	T	c	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	68522575	68522576	chr4:68522576:A:G	rs181004755	A	G	a	Hoxc9_MA0485.1	12	1	-	9.56089899318892	9.814895946953472	TGAAATAAATCAT
chr4	68866132	68866133	chr4:68866133:G:T	rs111418407	G	T	t	Hoxc9_MA0485.1	1	1	+	9.055852087938353	6.973091767361814	CGTCATAAATTAC
chr4	68997381	68997382	chr4:68997382:A:C	rs2018001	A	C	c	Hoxc9_MA0485.1	10	1	-	8.812427840545922	5.815192937107397	GGAAATAAATTAT
chr4	68997455	68997456	chr4:68997456:G:A	rs2017990	G	A	t	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	69045142	69045143	chr4:69045143:C:T	rs72851318	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	69045173	69045174	chr4:69045174:A:G	rs4418041	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	69097441	69097442	chr4:69097442:A:C	rs12647681	A	C	.	Hoxc9_MA0485.1	7	1	+	6.500681411317806	-0.40354765788777197	GGCCATCACTCAC
chr4	69097449	69097450	chr4:69097450:A:G	rs12647682	A	G	.	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	69180004	69180005	chr4:69180005:T:G	rs9999103	T	G	.	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	69924772	69924773	chr4:69924773:C:T	rs571784052	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	70241646	70241647	chr4:70241647:T:A	rs17148376	T	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr4	70601053	70601054	chr4:70601054:C:T	rs78115903	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	70759330	70759331	chr4:70759331:G:T	rs61440043	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	70779145	70779146	chr4:70779146:A:G	rs114226289	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	71211945	71211946	chr4:71211946:A:G	rs552165780	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	71211975	71211976	chr4:71211976:G:T	rs796685114	G	T	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	71254891	71254892	chr4:71254892:G:C	rs10938138	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	72567884	72567885	chr4:72567885:C:G	rs72858305	C	G	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	72567903	72567904	chr4:72567904:T:C	rs1353194619	T	C	T	Hoxc9_MA0485.1	3	1	-	8.935519774439868	4.153874510024646	TGTAGTAAATCAT
chr4	72896925	72896926	chr4:72896926:T:C	rs7677865	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	73484149	73484150	chr4:73484150:A:G	rs11939341	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	73609376	73609377	chr4:73609377:A:T	rs1745289	A	T	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	73668815	73668816	chr4:73668816:G:T	rs186609395	G	T	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	73865942	73865943	chr4:73865943:C:T	rs56366267	C	T	c	Hoxc9_MA0485.1	3	1	+	8.270297101558782	7.38204432853616	TGACGTAAATCTT
chr4	73897253	73897254	chr4:73897254:T:C	rs482239	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	73903011	73903012	chr4:73903012:C:A	rs138396790	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	74055740	74055741	chr4:74055741:A:G	rs1435517	A	G	a	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	74062600	74062601	chr4:74062601:C:T	rs16850405	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	74449006	74449007	chr4:74449007:A:C	rs28364983	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	74454808	74454809	chr4:74454809:T:C	chr4:74454809:T:C	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	74479148	74479149	chr4:74479149:G:A	rs1246406	G	A	A	Hoxc9_MA0485.1	4	1	+	10.32943791024757	11.497201624239153	GCCTGTAAATCAC
chr4	74752026	74752027	chr4:74752027:T:C	rs7686573	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	74756006	74756007	chr4:74756007:A:G	rs11734944	A	G	A	Hoxc9_MA0485.1	12	1	+	8.80780246303234	8.93348281986581	TTCAATAAATCAA
chr4	74756830	74756831	chr4:74756831:T:C	rs77547747	T	C	T	Hoxc9_MA0485.1	11	1	-	8.094440692468368	3.6819072935999992	GGCAATCAATTAG
chr4	74756852	74756853	chr4:74756853:C:A	rs12710868	C	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	74874802	74874803	chr4:74874803:A:C	rs1192202430	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	75048619	75048620	chr4:75048620:C:T	rs1043633	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	75497466	75497467	chr4:75497467:C:T	rs74868069	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	75497506	75497507	chr4:75497507:G:A	rs62318629	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	75889786	75889787	chr4:75889787:T:C	rs2047984	T	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	75925601	75925602	chr4:75925602:T:C	rs937788	T	C	T	Hoxc9_MA0485.1	2	1	-	8.466212312861822	7.68973114354427	GCATATAAATCTT
chr4	76488641	76488642	chr4:76488642:G:A	rs7654754	G	A	G	Hoxc9_MA0485.1	3	1	-	9.11365784304468	8.225405070022054	AGCCATGAATCAA
chr4	76488664	76488665	chr4:76488665:C:T	rs7656186	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	76559423	76559424	chr4:76559424:T:C	rs60623800	T	C	T	Hoxc9_MA0485.1	4	1	-	9.330352081407092	8.162588367415507	ATCAATAAATCAA
chr4	76737936	76737937	chr4:76737937:T:C	rs344139	T	C	T	Hoxc9_MA0485.1	1	1	-	8.903387236329783	10.462830810239844	GACTATCAATCAC
chr4	76747708	76747709	chr4:76747709:T:A	rs1389265	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	76868975	76868976	chr4:76868976:G:A	rs72856958	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	76995711	76995712	chr4:76995712:G:A	rs6532758	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	77049408	77049409	chr4:77049409:G:T	rs4252942	G	T	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	78040511	78040512	chr4:78040512:C:A	rs7340968	C	A	C	Hoxc9_MA0485.1	0	1	-	7.730104805312954	6.6747400536471995	GGCAGTGAATCTC
chr4	78080222	78080223	chr4:78080223:C:G	rs72858775	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	78120715	78120716	chr4:78120716:G:A	rs78868957	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	78120743	78120744	chr4:78120744:C:T	rs72860640	C	T	C	Hoxc9_MA0485.1	3	1	+	7.9294879629962205	7.041235189973597	GCCCGTGAATCAT
chr4	78355264	78355265	chr4:78355265:G:A	rs441064	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	78374410	78374411	chr4:78374411:G:A	rs116432230	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	78627559	78627560	chr4:78627560:C:T	rs7677783	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	78648888	78648889	chr4:78648889:A:G	rs6835210	A	G	G	Hoxc9_MA0485.1	12	1	-	8.812427840545922	9.066424794310475	GGAAATAAATTAT
chr4	79455323	79455324	chr4:79455324:C:T	rs11098702	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	79726286	79726287	chr4:79726287:A:G	rs7669952	A	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	79852582	79852583	chr4:79852583:T:C	rs35248635	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	79865231	79865232	chr4:79865232:G:C	rs566505577	G	C	G	Hoxc9_MA0485.1	2	1	-	8.206358913830794	5.510474772109483	CCCCATCAATCAG
chr4	79920737	79920738	chr4:79920738:C:T	rs7684497	C	T	T	Hoxc9_MA0485.1	2	1	+	9.852800151974575	8.475781674813351	ACCTATAAATCTT
chr4	80185894	80185895	chr4:80185895:T:C	rs17004832	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	80187871	80187872	chr4:80187872:A:T	rs78759277	A	T	A	Hoxc9_MA0485.1	8	1	+	7.395578806801334	0.4936202966663736	GGCAGTCAATCCC
chr4	80231248	80231249	chr4:80231249:C:T	rs77368263	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	80428971	80428972	chr4:80428972:A:G	rs79950287	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	80529304	80529305	chr4:80529305:G:T	rs17004931	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	80640210	80640211	chr4:80640211:T:C	rs71596024	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	81039622	81039623	chr4:81039623:T:G	rs7697151	T	G	T	Hoxc9_MA0485.1	11	1	+	9.225859226354649	5.670915212695303	AGAAATAAATCTT
chr4	81143079	81143080	chr4:81143080:C:T	rs28377778	C	T	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	81291015	81291016	chr4:81291016:A:C	rs10488936	A	C	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	81755452	81755453	chr4:81755453:A:T	rs1497781	A	T	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	81836936	81836937	chr4:81836937:C:T	rs593571	C	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	81841587	81841588	chr4:81841588:A:G	rs1993798	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	82073488	82073489	chr4:82073489:C:T	rs7671713	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	82198027	82198028	chr4:82198028:G:T	rs9683882	G	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	82428807	82428808	chr4:82428808:A:G	rs147809606	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	82630191	82630192	chr4:82630192:C:G	rs3733230	C	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	82687804	82687805	chr4:82687805:G:A	rs7693112	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	82706066	82706067	chr4:82706067:C:G	rs933290940	C	G	C	Hoxc9_MA0485.1	5	1	+	7.900143034623292	5.486911421542183	GCCCACAAATCAC
chr4	83044032	83044033	chr4:83044033:A:T	rs1268630987	A	T	A	Hoxc9_MA0485.1	6	1	+	10.038936104017322	6.510211638479806	AGTCATAAATCTG
chr4	83075875	83075876	chr4:83075876:T:G	rs11944557	T	G	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	83224463	83224464	chr4:83224464:C:T	rs11942687	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	83387573	83387574	chr4:83387574:G:A	rs17006766	G	A	G	Hoxc9_MA0485.1	11	1	-	8.856616698118554	10.052017167808613	TACCATAAATCCC
chr4	83466280	83466281	chr4:83466281:C:T	rs13115704	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	83617655	83617656	chr4:83617656:T:G	rs17359636	T	G	T	Hoxc9_MA0485.1	11	1	-	10.4418368725734	8.388847017674319	TCCTATAAATCAC
chr4	84443772	84443773	chr4:84443773:G:A	rs730796	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	84517025	84517026	chr4:84517026:C:T	rs6853662	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	84549930	84549931	chr4:84549931:G:C	rs6823656	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	84585907	84585908	chr4:84585908:G:T	rs539787397	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	84852249	84852250	chr4:84852250:C:T	rs116069128	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	84937175	84937176	chr4:84937176:T:C	rs6848127	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	85391855	85391856	chr4:85391856:A:G	rs147975787	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	85437467	85437468	chr4:85437468:T:G	rs1481775	T	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	85495841	85495842	chr4:85495842:C:T	rs72654054	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	85495859	85495860	chr4:85495860:A:T	rs13126084	A	T	A	Hoxc9_MA0485.1	2	1	-	9.810745363832472	9.26836086858994	AGTCATAAATTAC
chr4	85707893	85707894	chr4:85707894:G:A	rs73835536	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	85788745	85788746	chr4:85788746:T:G	rs7662174	T	G	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	85863014	85863015	chr4:85863015:G:T	rs345353	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	85969009	85969010	chr4:85969010:C:T	rs376742540	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	86033713	86033714	chr4:86033714:T:C	rs3775173	T	C	T	Hoxc9_MA0485.1	4	1	-	9.177617644246663	8.00985393025508	TACTATAAATCAA
chr4	86141209	86141210	chr4:86141210:C:A	rs4352468	C	A	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	86704874	86704875	chr4:86704875:A:G	rs1212166	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	86806402	86806403	chr4:86806403:A:G	rs28417582	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	86817813	86817814	chr4:86817814:C:T	rs10000226	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	86847363	86847364	chr4:86847364:T:G	rs13149938	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	87024248	87024249	chr4:87024249:G:T	rs34140562	G	T	G	Hoxc9_MA0485.1	2	1	-	9.69612738864417	7.776724416240415	ACCAGTAAATCAT
chr4	87220944	87220945	chr4:87220945:T:C	rs73839118	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	87422720	87422721	chr4:87422721:C:A	chr4:87422721:C:A	C	A	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	87423498	87423499	chr4:87423499:A:T	rs7680878	A	T	A	Hoxc9_MA0485.1	5	1	-	8.624273040599185	1.7257300648795915	CACCATAAATCCC
chr4	87525513	87525514	chr4:87525514:T:A	rs28521138	T	A	T	Hoxc9_MA0485.1	8	1	-	8.837572928709797	1.9356144185748405	TGCAATAAATCCA
chr4	87525520	87525521	chr4:87525521:C:T	rs59233926	C	T	C	Hoxc9_MA0485.1	1	1	-	8.837572928709797	7.278129354799738	TGCAATAAATCCA
chr4	87749424	87749425	chr4:87749425:C:T	rs2732195	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	87785978	87785979	chr4:87785979:G:C	rs2616268	G	C	G	Hoxc9_MA0485.1	10	1	-	9.692057769314918	4.89098696156764	TGACATAAATCTC
chr4	87805806	87805807	chr4:87805807:A:G	rs17013175	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	87864394	87864395	chr4:87864395:G:C	rs12650750	G	C	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	87866681	87866682	chr4:87866682:C:T	rs4693891	C	T	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	87896261	87896262	chr4:87896262:G:C	rs2169612	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	87942078	87942079	chr4:87942079:G:C	rs10008869	G	C	G	Hoxc9_MA0485.1	6	1	+	8.365053386013535	9.225927857191973	AGCAATGAATCTC
chr4	87950182	87950183	chr4:87950183:C:G	rs182674241	C	G	C	Hoxc9_MA0485.1	0	1	-	8.439259780342132	7.151551371157011	GAATATAAATCAG
chr4	88230675	88230676	chr4:88230676:T:A	rs41478845	T	A	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	88361534	88361535	chr4:88361535:C:T	rs9790829	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	88822430	88822431	chr4:88822431:A:T	rs3775375	A	T	a	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	88911380	88911381	chr4:88911381:C:T	rs10019681	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	88970920	88970921	chr4:88970921:G:A	rs1903007	G	A	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	88982972	88982973	chr4:88982973:T:C	rs1921681	T	C	T	Hoxc9_MA0485.1	4	1	-	8.212958511020174	7.04519479702859	TTCCATCAATCAC
chr4	89173929	89173930	chr4:89173930:C:T	rs541025	C	T	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	89303460	89303461	chr4:89303461:T:C	chr4:89303461:T:C	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	89489390	89489391	chr4:89489391:A:T	rs28432001	A	T	A	Hoxc9_MA0485.1	2	1	-	10.221623833045	9.679239337802468	ACTCATAAATCAT
chr4	89489399	89489400	chr4:89489400:G:A	rs12648284	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	89491582	89491583	chr4:89491583:T:C	rs3796669	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr4	89753877	89753878	chr4:89753878:T:C	rs77795436	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	90127790	90127791	chr4:90127791:G:T	rs187161303	G	T	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	90127792	90127793	chr4:90127793:G:C	rs190422682	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	90318058	90318059	chr4:90318059:A:C	rs4353865	A	C	C	Hoxc9_MA0485.1	1	1	-	8.681550251245836	10.764310571822374	GTCAGTAAATCTC
chr4	90683414	90683415	chr4:90683415:A:G	rs12501156	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	90909219	90909220	chr4:90909220:T:A	rs7660952	T	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	90996211	90996212	chr4:90996212:C:T	rs75289618	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	91064627	91064628	chr4:91064628:C:G	rs12508066	C	G	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	91330940	91330941	chr4:91330941:T:C	rs6833290	T	C	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	91340524	91340525	chr4:91340525:G:T	rs4593093	G	T	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	92335071	92335072	chr4:92335072:C:G	rs28550894	C	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	92988575	92988576	chr4:92988576:T:A	rs12498874	T	A	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	93352679	93352680	chr4:93352680:T:A	rs1433659	T	A	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr4	93568957	93568958	chr4:93568958:A:G	rs35170469	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	93751551	93751552	chr4:93751552:A:G	rs4692990	A	G	A	Hoxc9_MA0485.1	12	1	-	8.520751020171662	8.774747973936215	CACAGTAAATCAT
chr4	94334789	94334790	chr4:94334790:C:G	rs79911406	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	94413529	94413530	chr4:94413530:A:T	rs56020558	A	T	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	94413549	94413550	chr4:94413550:C:T	rs78502300	C	T	C	Hoxc9_MA0485.1	0	1	+	9.435890369916912	9.668234027436279	CTCCATAAATCAG
chr4	94604034	94604035	chr4:94604035:G:T	rs12639623	G	T	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	94671225	94671226	chr4:94671226:G:A	rs1472962	G	A	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	94680625	94680626	chr4:94680626:G:A	rs77007938	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	95109250	95109251	chr4:95109251:G:T	rs3796432	G	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	95214401	95214402	chr4:95214402:C:T	rs2571038	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	95266209	95266210	chr4:95266210:C:T	rs17352777	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	95499535	95499536	chr4:95499536:T:C	rs113173767	T	C	T	Hoxc9_MA0485.1	0	1	+	9.306970670261693	9.074627012742324	TGCAATCAATCAT
chr4	95541292	95541293	chr4:95541293:C:T	rs13149656	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	95661403	95661404	chr4:95661404:G:C	rs34278336	G	C	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	95731922	95731923	chr4:95731923:C:T	rs2903012	C	T	C	Hoxc9_MA0485.1	4	1	-	10.245348687992045	11.413112401983629	AGCAGTAAATCAA
chr4	95731927	95731928	chr4:95731928:T:C	rs12643863	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	96164911	96164912	chr4:96164912:A:G	rs78462744	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	96454905	96454906	chr4:96454906:T:C	rs7699229	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	96604295	96604296	chr4:96604296:T:G	rs6532641	T	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	96614627	96614628	chr4:96614628:A:C	rs72688094	A	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	96632656	96632657	chr4:96632657:G:A	rs28542463	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	96784714	96784715	chr4:96784715:G:A	rs11097522	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	96784724	96784725	chr4:96784725:T:A	rs11097523	T	A	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	97115572	97115573	chr4:97115573:C:T	rs6837640	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	97197231	97197232	chr4:97197232:T:C	rs6858100	T	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	97252773	97252774	chr4:97252774:T:C	rs17026587	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	97759960	97759961	chr4:97759961:C:T	rs165241	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	98480810	98480811	chr4:98480811:G:A	rs78344931	G	A	g	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	98565064	98565065	chr4:98565065:T:C	rs79669446	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	98565081	98565082	chr4:98565082:C:T	rs76611025	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	98716942	98716943	chr4:98716943:A:C	rs56082418	A	C	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	98785416	98785417	chr4:98785417:G:T	rs62323688	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	99056374	99056375	chr4:99056375:G:A	rs77283042	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	99300909	99300910	chr4:99300910:C:T	rs13117371	C	T	N	Hoxc9_MA0485.1	10	1	+	8.765278595072383	6.961442690763631	AGCCATCAATCCC
chr4	99394823	99394824	chr4:99394824:A:T	rs12508928	A	T	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	99414428	99414429	chr4:99414429:T:C	rs284785	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	99671217	99671218	chr4:99671218:C:T	rs11728769	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	99800585	99800586	chr4:99800586:C:T	rs9991185	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	100287744	100287745	chr4:100287745:G:A	rs80229744	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	100348669	100348670	chr4:100348670:A:G	rs7674351	A	G	A	Hoxc9_MA0485.1	4	1	+	8.316809185915721	7.149045471924139	GGACATGAATCAT
chr4	100421506	100421507	chr4:100421507:G:A	rs59679939	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	100421540	100421541	chr4:100421541:G:A	rs145005205	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	101222632	101222633	chr4:101222633:T:G	chr4:101222633:T:G	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	101266258	101266259	chr4:101266259:C:T	rs11933861	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	101288202	101288203	chr4:101288203:T:G	rs1441433	T	G	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	101346295	101346296	chr4:101346296:G:A	rs2583391	G	A	a	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	101678345	101678346	chr4:101678346:G:A	rs7689967	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	102211886	102211887	chr4:102211887:C:T	rs7667281	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	102398485	102398486	chr4:102398486:A:G	rs80271034	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	102771185	102771186	chr4:102771186:T:C	rs150896	T	C	t	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	105101999	105102000	chr4:105102000:G:T	rs72953283	G	T	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	105414854	105414855	chr4:105414855:G:A	rs72668234	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	105438235	105438236	chr4:105438236:A:G	rs2713863	A	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	105957581	105957582	chr4:105957582:A:G	rs80089854	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	106080609	106080610	chr4:106080610:G:A	chr4:106080610:G:A	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	106494208	106494209	chr4:106494209:C:T	rs28376417	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	106569196	106569197	chr4:106569197:C:G	rs112590180	C	G	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	106598349	106598350	chr4:106598350:T:C	rs1346032	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	106598364	106598365	chr4:106598365:G:A	rs1346033	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	106666457	106666458	chr4:106666458:T:G	rs145511715	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	106794134	106794135	chr4:106794135:T:C	rs704045	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	106800418	106800419	chr4:106800419:G:A	rs17036980	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	107195758	107195759	chr4:107195759:G:A	rs62312127	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	107261346	107261347	chr4:107261347:T:A	rs13150544	T	A	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	107443165	107443166	chr4:107443166:A:G	rs17037677	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	107477576	107477577	chr4:107477577:C:T	rs9992869	C	T	-	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	107871578	107871579	chr4:107871579:A:G	rs7671347	A	G	A	Hoxc9_MA0485.1	4	1	+	8.667014618551192	7.49925090455961	GGACATAAATAAT
chr4	107991120	107991121	chr4:107991121:A:G	rs149026135	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	108141528	108141529	chr4:108141529:A:C	rs144559975	A	C	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	108371288	108371289	chr4:108371289:G:A	rs12643046	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	108446748	108446749	chr4:108446749:G:C	rs147609497	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	108590343	108590344	chr4:108590344:T:C	rs10856993	T	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	108621105	108621106	chr4:108621106:C:T	chr4:108621106:C:T	C	T	C	Hoxc9_MA0485.1	12	1	+	8.776927671670567	8.522930717906014	CTTCATAAATCAC
chr4	108644578	108644579	chr4:108644579:C:T	rs2575603	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	108954956	108954957	chr4:108954957:A:T	rs1405148	A	T	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	108959862	108959863	chr4:108959863:C:T	rs28626059	C	T	C	Hoxc9_MA0485.1	12	1	+	8.700975395917995	8.446978442153442	AGTTGTAAATCTC
chr4	109023896	109023897	chr4:109023897:G:A	rs12510004	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	109041725	109041726	chr4:109041726:A:G	rs79798616	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	109128485	109128486	chr4:109128486:A:G	rs72617755	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	109558391	109558392	chr4:109558392:C:G	rs13147439	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	110140306	110140307	chr4:110140307:T:C	rs112475006	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	110793560	110793561	chr4:110793561:C:T	rs141525294	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	111175329	111175330	chr4:111175330:A:G	rs1601656	A	G	a	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	111815211	111815212	chr4:111815212:A:G	rs326869	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	112332544	112332545	chr4:112332545:T:G	rs6820941	T	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	112410428	112410429	chr4:112410429:A:G	rs6811550	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	112803010	112803011	chr4:112803011:C:T	rs4082123	C	T	c	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	112817750	112817751	chr4:112817751:C:T	rs145931677	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	112896175	112896176	chr4:112896176:A:G	rs17045113	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	113109423	113109424	chr4:113109424:G:A	rs7679106	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	113187118	113187119	chr4:113187119:A:C	rs1485585	A	C	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr4	113325899	113325900	chr4:113325900:A:G	rs56098215	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	113712207	113712208	chr4:113712208:A:G	rs2040744	A	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	113789664	113789665	chr4:113789665:A:G	rs9654199	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	113878902	113878903	chr4:113878903:T:C	rs76907782	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	113999062	113999063	chr4:113999063:C:T	rs41518248	C	T	C	Hoxc9_MA0485.1	0	1	+	8.09989914904903	8.332242806568399	CGCAATAAATAAG
chr4	114225664	114225665	chr4:114225665:C:T	rs2173248	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	114236295	114236296	chr4:114236296:A:T	rs28549743	A	T	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	114250643	114250644	chr4:114250644:T:A	rs12644219	T	A	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	114378430	114378431	chr4:114378431:A:T	rs115970144	A	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	114378439	114378440	chr4:114378440:A:G	rs114652333	A	G	A	Hoxc9_MA0485.1	5	1	-	8.8188766760749	4.333565313436416	TGCAATAAATTTT
chr4	114410338	114410339	chr4:114410339:C:T	rs13125555	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	114437741	114437742	chr4:114437742:A:G	rs73845024	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	114437755	114437756	chr4:114437756:C:T	rs114380279	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr4	114869923	114869924	chr4:114869924:C:T	rs9991654	C	T	c	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	115112967	115112968	chr4:115112968:G:C	rs17047653	G	C	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	115495754	115495755	chr4:115495755:T:C	rs7682921	T	C	C	Hoxc9_MA0485.1	5	1	+	9.0154336122097	4.530122249571215	GGATATAAATCTA
chr4	115757767	115757768	chr4:115757768:G:T	rs17488786	G	T	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	115803236	115803237	chr4:115803237:T:C	rs4001785	T	C	C	Hoxc9_MA0485.1	0	1	-	7.880246436667939	8.413061569958941	ACACATAAATCCC
chr4	116480745	116480746	chr4:116480746:G:A	rs6843736	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	116632523	116632524	chr4:116632524:T:C	rs116245927	T	C	T	Hoxc9_MA0485.1	2	1	+	10.625833106806203	12.002851583967425	AGTAATAAATCAT
chr4	116796063	116796064	chr4:116796064:T:C	rs12501114	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	116839958	116839959	chr4:116839959:T:C	rs116796294	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	116858780	116858781	chr4:116858781:T:C	rs10008401	T	C	T	Hoxc9_MA0485.1	11	1	+	7.963494472330958	6.7680940026409	GTCAGTAAATCTG
chr4	116942380	116942381	chr4:116942381:C:T	rs4834599	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	117383622	117383623	chr4:117383623:G:A	rs191277255	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	117516150	117516151	chr4:117516151:C:A	rs1352575	C	A	A	Hoxc9_MA0485.1	2	1	+	9.486438320036324	7.56703534763257	AGCCATAAATTTA
chr4	117597194	117597195	chr4:117597195:C:G	rs10857054	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	117599015	117599016	chr4:117599016:A:G	rs6534043	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	117777695	117777696	chr4:117777696:G:C	rs6534056	G	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	117845034	117845035	chr4:117845035:T:C	rs4580717	T	C	T	Hoxc9_MA0485.1	1	1	-	10.021353779995012	11.580797353905073	TACTATAAATCAC
chr4	118351802	118351803	chr4:118351803:T:C	rs7674055	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	118398489	118398490	chr4:118398490:C:G	rs76545465	C	G	-	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	118400848	118400849	chr4:118400849:T:C	rs1818521	T	C	-	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	118963945	118963946	chr4:118963946:A:G	rs56247710	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	119026032	119026033	chr4:119026033:A:G	rs7671665	A	G	A	Hoxc9_MA0485.1	9	1	-	8.446096199083254	1.5578703847096216	TGCAATGAATCAT
chr4	119081356	119081357	chr4:119081357:C:T	rs114844288	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr4	119082084	119082085	chr4:119082085:C:T	rs60084687	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	119117488	119117489	chr4:119117489:G:A	rs182937934	G	A	G	Hoxc9_MA0485.1	0	1	-	7.674312693337833	7.906656350857202	CGCAATAAAACAC
chr4	120018977	120018978	chr4:120018978:C:T	rs17374036	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	120094921	120094922	chr4:120094922:A:T	rs1362595	A	T	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	120249821	120249822	chr4:120249822:T:C	rs1553689	T	C	T	Hoxc9_MA0485.1	8	1	-	8.061110969226467	1.159152459091507	TGTCATCAATCTC
chr4	120363068	120363069	chr4:120363069:C:G	rs72670497	C	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	120449139	120449140	chr4:120449140:C:G	rs143634173	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	121074542	121074543	chr4:121074543:G:A	rs2136948	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	121692849	121692850	chr4:121692850:C:T	rs1411815379	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	122082924	122082925	chr4:122082925:A:G	rs80082201	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	122908532	122908533	chr4:122908533:C:T	rs4833846	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	123009361	123009362	chr4:123009362:G:A	rs4833261	G	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	123177955	123177956	chr4:123177956:T:C	rs79940946	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr4	123233921	123233922	chr4:123233922:T:G	rs303142	T	G	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	123496160	123496161	chr4:123496161:C:T	rs896677	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	123700376	123700377	chr4:123700377:A:T	rs74399044	A	T	A	Hoxc9_MA0485.1	2	1	-	8.89997562268565	8.357591127443118	ACTCATAAATCTG
chr4	123733415	123733416	chr4:123733416:T:C	rs4833941	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	123733416	123733417	chr4:123733417:G:A	rs4833287	G	A	g	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	123849687	123849688	chr4:123849688:A:G	rs4449426	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	123849709	123849710	chr4:123849710:A:G	rs4340803	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	123984593	123984594	chr4:123984594:T:G	rs9884540	T	G	G	Hoxc9_MA0485.1	5	1	+	11.948769714469547	5.050226738749956	GGCCATAAATCTG
chr4	124019282	124019283	chr4:124019283:T:C	rs35050526	T	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	124137999	124138000	chr4:124138000:G:A	rs76582698	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	124174457	124174458	chr4:124174458:A:G	rs10021517	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	124945409	124945410	chr4:124945410:A:G	rs12513065	A	G	A	Hoxc9_MA0485.1	4	1	+	8.852076264036917	7.684312550045335	GTCTATAAATCTA
chr4	124999158	124999159	chr4:124999159:A:C	rs17185668	A	C	A	Hoxc9_MA0485.1	7	1	+	7.668012620729795	0.7637835515242168	GCCTGTAAATTTC
chr4	125052228	125052229	chr4:125052229:A:G	rs35978979	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	125070920	125070921	chr4:125070921:A:T	rs571363644	A	T	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	125116102	125116103	chr4:125116103:T:C	rs28617709	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	125228798	125228799	chr4:125228799:T:A	rs10003108	T	A	A	Hoxc9_MA0485.1	9	1	+	9.996678408971151	6.169035840471126	GGCCATAAATAAA
chr4	125651291	125651292	chr4:125651292:G:C	chr4:125651292:G:C	G	C	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr4	125651314	125651315	chr4:125651315:A:G	rs4834062	A	G	g	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	125663742	125663743	chr4:125663743:T:A	rs62313825	T	A	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	125762560	125762561	chr4:125762561:G:A	rs10018249	G	A	G	Hoxc9_MA0485.1	4	1	+	8.927110040663434	10.094873754655017	AGCCGTAAATCCA
chr4	125919246	125919247	chr4:125919247:G:A	rs77109373	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	126564474	126564475	chr4:126564475:A:C	rs313098	A	C	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	126655056	126655057	chr4:126655057:G:A	rs313122	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	126688708	126688709	chr4:126688709:A:G	rs313073	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	126757134	126757135	chr4:126757135:C:G	rs6839577	C	G	C	Hoxc9_MA0485.1	2	1	-	9.970941351663118	12.666825493384426	GGGCATAAATCTC
chr4	126938190	126938191	chr4:126938191:T:C	rs1877072	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	126941513	126941514	chr4:126941514:T:C	rs13138236	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	127073267	127073268	chr4:127073268:A:C	rs13122080	A	C	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	127748216	127748217	chr4:127748217:C:T	chr4:127748217:C:T	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	128289981	128289982	chr4:128289982:C:T	rs7682168	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	128519016	128519017	chr4:128519017:T:C	rs6534686	T	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	128553499	128553500	chr4:128553500:G:A	rs761411175	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	128919351	128919352	chr4:128919352:C:T	rs11098992	C	T	C	Hoxc9_MA0485.1	1	1	+	9.060055198327001	8.116255359082137	ACCAATAAATTAT
chr4	129218615	129218616	chr4:129218616:G:A	rs1017915409	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	129232074	129232075	chr4:129232075:G:A	rs73848973	G	A	A	Hoxc9_MA0485.1	2	1	-	9.330250533599825	7.953232056438602	TCCTATAAATCTT
chr4	129234432	129234433	chr4:129234433:A:G	rs6842443	A	G	A	Hoxc9_MA0485.1	1	1	+	8.059651100581434	9.619094674491494	GACTATCAATCAA
chr4	129266719	129266720	chr4:129266720:T:C	rs4132289	T	C	T	Hoxc9_MA0485.1	5	1	+	8.554826848437134	4.06951548579865	GACTATAAATTAG
chr4	129430302	129430303	chr4:129430303:T:A	chr4:129430303:T:A	T	A	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	130077316	130077317	chr4:130077317:T:C	rs2221618	T	C	T	Hoxc9_MA0485.1	8	1	-	9.327512553364755	2.4255540432297966	GAACATAAATCAG
chr4	130467309	130467310	chr4:130467310:C:T	rs9942223	C	T	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	130567403	130567404	chr4:130567404:T:C	rs10022058	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	130721641	130721642	chr4:130721642:T:A	rs373462	T	A	.	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr4	132599990	132599991	chr4:132599991:C:T	rs12643115	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	133682094	133682095	chr4:133682095:A:G	rs2036646	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	133731889	133731890	chr4:133731890:G:T	rs113428360	G	T	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	134105082	134105083	chr4:134105083:A:G	rs17543450	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	134544584	134544585	chr4:134544585:G:A	rs182477049	G	A	G	Hoxc9_MA0485.1	0	1	-	10.677262895498266	10.909606553017635	CACCATAAATCAC
chr4	135244394	135244395	chr4:135244395:T:C	rs1036733731	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	135460274	135460275	chr4:135460275:A:G	rs12640047	A	G	A	Hoxc9_MA0485.1	3	1	+	8.00946208973281	3.2278168253175874	GGCATTAAATCTT
chr4	135637968	135637969	chr4:135637969:G:T	rs72713029	G	T	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	135787361	135787362	chr4:135787362:G:T	rs72982898	G	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	136528394	136528395	chr4:136528395:G:T	chr4:136528395:G:T	G	T	G	Hoxc9_MA0485.1	2	1	+	8.884913212183763	10.20377887674385	TGGTATAAATCAC
chr4	136829714	136829715	chr4:136829715:C:A	rs146284984	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	137046676	137046677	chr4:137046677:T:C	rs17629846	T	C	T	Hoxc9_MA0485.1	2	1	-	8.50386296932996	7.727381800012407	CAACATAAATCAT
chr4	137050597	137050598	chr4:137050598:G:A	rs7664420	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	137359483	137359484	chr4:137359484:A:T	rs76316680	A	T	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr4	137576426	137576427	chr4:137576427:T:C	rs34687569	T	C	T	Hoxc9_MA0485.1	6	1	-	9.201310770336299	6.167105003826879	GGTTATAAATTAT
chr4	137602199	137602200	chr4:137602200:C:T	rs78640598	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr4	137621127	137621128	chr4:137621128:G:T	rs9995514	G	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	137943057	137943058	chr4:137943058:C:T	rs13128618	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	137943092	137943093	chr4:137943093:C:T	rs7695489	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	137943094	137943095	chr4:137943095:G:T	rs489796	G	T	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	137955385	137955386	chr4:137955386:C:T	rs1474148	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	138005571	138005572	chr4:138005572:G:C	rs7662869	G	C	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	138018873	138018874	chr4:138018874:C:T	rs142594974	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	138052373	138052374	chr4:138052374:C:T	rs13102080	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	138407040	138407041	chr4:138407041:T:G	rs6853733	T	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr4	138670061	138670062	chr4:138670062:G:A	rs28530586	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	138686613	138686614	chr4:138686614:A:T	rs139277772	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	138804868	138804869	chr4:138804869:C:G	chr4:138804869:C:G	C	G	C	Hoxc9_MA0485.1	0	1	-	11.097086629497914	9.809378220312793	GGCCATCAATCAT
chr4	138824975	138824976	chr4:138824976:A:G	rs6846988	A	G	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	138826941	138826942	chr4:138826942:A:G	rs6419267	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	138857417	138857418	chr4:138857418:C:G	rs62322142	C	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	138871146	138871147	chr4:138871147:G:T	rs6823871	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	138876514	138876515	chr4:138876515:G:A	rs78054251	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr4	138940047	138940048	chr4:138940048:G:T	rs6535790	G	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	139172410	139172411	chr4:139172411:C:T	rs4597768	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	139172411	139172412	chr4:139172412:G:A	rs72629204	G	A	G	Hoxc9_MA0485.1	0	1	+	10.236212158319477	9.703397025028476	GGCCATGAATCAT
chr4	139239831	139239832	chr4:139239832:A:G	rs78924895	A	G	a	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	139300275	139300276	chr4:139300276:G:A	rs34934709	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	139498039	139498040	chr4:139498040:A:G	rs77328175	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	139499448	139499449	chr4:139499449:C:T	rs11937951	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	139558906	139558907	chr4:139558907:C:G	rs76530184	C	G	C	Hoxc9_MA0485.1	12	1	-	8.56291519189456	9.280970970809438	GACCATAAATAAG
chr4	139658796	139658797	chr4:139658797:A:C	rs1453136	A	C	A	Hoxc9_MA0485.1	10	1	-	8.271605052174266	5.27437014873574	GCCTGTAAATTAT
chr4	139809051	139809052	chr4:139809052:A:G	rs73854362	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	139814597	139814598	chr4:139814598:G:A	rs60295425	G	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	139856912	139856913	chr4:139856913:A:G	rs10018246	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	139876528	139876529	chr4:139876529:A:G	rs11100326	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	139876539	139876540	chr4:139876540:T:C	rs1869716	T	C	T	Hoxc9_MA0485.1	9	1	+	7.68246834094587	0.7942425265722366	GGCCTTCAATCAC
chr4	140236833	140236834	chr4:140236834:C:T	rs17005648	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	140252166	140252167	chr4:140252167:G:C	rs1392996592	G	C	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	140302311	140302312	chr4:140302312:G:C	rs60648966	G	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	140689018	140689019	chr4:140689019:T:C	rs4956475	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	140726945	140726946	chr4:140726946:C:T	rs72720317	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr4	140935152	140935153	chr4:140935153:C:T	rs11944147	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	141206908	141206909	chr4:141206909:C:T	rs62327562	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	141214593	141214594	chr4:141214594:A:G	rs6855160	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	141214638	141214639	chr4:141214639:T:C	rs10020128	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	141220994	141220995	chr4:141220995:G:A	rs182929984	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	141220999	141221000	chr4:141221000:A:C	rs555521178	A	C	A	Hoxc9_MA0485.1	9	1	-	8.192358833092964	1.3041330187193343	AGCAGTAAATCCA
chr4	141221016	141221017	chr4:141221017:G:A	rs112082999	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr4	141325275	141325276	chr4:141325276:A:G	rs1369970	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	141351935	141351936	chr4:141351936:C:A	rs17456275	C	A	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr4	141483997	141483998	chr4:141483998:G:C	rs2090878	G	C	C	Hoxc9_MA0485.1	0	1	+	10.118633758139344	8.830925348954224	GACAATAAATCTT
chr4	142044505	142044506	chr4:142044506:C:T	rs75676823	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	142607859	142607860	chr4:142607860:A:G	rs13120964	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	143187487	143187488	chr4:143187488:A:G	rs4574353	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	143395885	143395886	chr4:143395886:C:T	rs2048408	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	143625379	143625380	chr4:143625380:C:T	rs34164313	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	143905253	143905254	chr4:143905254:C:G	rs1838522	C	G	.	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	143921751	143921752	chr4:143921752:C:T	rs3856989	C	T	.	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	144509716	144509717	chr4:144509717:G:A	rs72946341	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	144536848	144536849	chr4:144536849:C:A	rs7674469	C	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	144664368	144664369	chr4:144664369:G:A	rs6825848	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	145042990	145042991	chr4:145042991:C:T	rs995660442	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	145042995	145042996	chr4:145042996:A:C	rs34941083	A	C	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	145181068	145181069	chr4:145181069:A:G	rs138810792	A	G	A	Hoxc9_MA0485.1	4	1	+	10.597918422268563	9.43015470827698	GTCCATAAATCAA
chr4	145552842	145552843	chr4:145552843:A:G	rs11946962	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	145694846	145694847	chr4:145694847:C:T	rs9996564	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	145779871	145779872	chr4:145779872:T:C	rs74770515	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr4	145796016	145796017	chr4:145796017:A:C	rs10010535	A	C	A	Hoxc9_MA0485.1	0	1	+	8.826840205671674	8.071946929777555	AGTAATAAATCCC
chr4	145957268	145957269	chr4:145957269:G:A	rs1105295	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr4	146154377	146154378	chr4:146154378:C:T	rs9308198	C	T	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	146975032	146975033	chr4:146975033:C:T	rs6855963	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	147123589	147123590	chr4:147123590:T:C	rs10012343	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr4	147136889	147136890	chr4:147136890:T:G	rs16998716	T	G	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	147136898	147136899	chr4:147136899:A:G	rs1316704784	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	147597093	147597094	chr4:147597094:C:T	rs10434124	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	147597113	147597114	chr4:147597114:T:C	rs10434125	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	147776113	147776114	chr4:147776114:C:T	rs11725718	C	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	147776114	147776115	chr4:147776115:T:G	rs11730036	T	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr4	147780195	147780196	chr4:147780196:A:G	rs1271663030	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	147891698	147891699	chr4:147891699:C:T	rs142071561	C	T	C	Hoxc9_MA0485.1	12	1	+	8.478781159115629	8.224784205351076	GGTCTTAAATCAC
chr4	147924989	147924990	chr4:147924990:A:G	rs74565140	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	147991910	147991911	chr4:147991911:C:G	rs75742953	C	G	C	Hoxc9_MA0485.1	1	1	-	8.49037000008783	7.351409518756158	GGCTATGAATCTT
chr4	148052034	148052035	chr4:148052035:C:T	rs72726605	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	148052079	148052080	chr4:148052080:G:A	rs13127241	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	148104373	148104374	chr4:148104374:G:T	rs73853740	G	T	G	Hoxc9_MA0485.1	3	1	-	9.54717904811639	8.812427840545922	GGACATAAATTAT
chr4	148721990	148721991	chr4:148721991:A:G	rs7681551	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	148925495	148925496	chr4:148925496:C:T	rs12233660	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	149264286	149264287	chr4:149264287:T:C	rs1040414625	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr4	150176239	150176240	chr4:150176240:C:T	rs6821618	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	150298484	150298485	chr4:150298485:A:C	rs76930340	A	C	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	150324301	150324302	chr4:150324302:T:C	rs10010954	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	150533901	150533902	chr4:150533902:G:A	rs28550140	G	A	G	Hoxc9_MA0485.1	3	1	-	7.923351779512793	7.03509900649017	TGCCATAAAACAG
chr4	151195728	151195729	chr4:151195729:A:C	rs10461255	A	C	A	Hoxc9_MA0485.1	6	1	+	8.159064616194389	5.985733320863407	GCACATAAATCCT
chr4	151853671	151853672	chr4:151853672:T:C	rs361104	T	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	151855118	151855119	chr4:151855119:C:T	rs6835546	C	T	C	Hoxc9_MA0485.1	0	1	-	8.82108385753998	8.288268724248978	GTCAGTAAATCAG
chr4	152073077	152073078	chr4:152073078:G:A	rs149519859	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr4	152085864	152085865	chr4:152085865:A:C	rs9992635	A	C	C	Hoxc9_MA0485.1	1	1	-	8.922386354068513	11.00514667464505	GTTTATAAATCAT
chr4	152100075	152100076	chr4:152100076:G:A	rs116008378	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	152100083	152100084	chr4:152100084:C:T	rs570143851	C	T	C	Hoxc9_MA0485.1	2	1	+	8.49037000008783	7.113351522926608	GGCTATGAATCTT
chr4	152147363	152147364	chr4:152147364:A:T	rs13130168	A	T	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	152610437	152610438	chr4:152610438:C:G	rs10517566	C	G	C	Hoxc9_MA0485.1	11	1	+	8.765209964235058	6.405666420265772	AGACATAAATCCT
chr4	152815504	152815505	chr4:152815505:T:C	rs6535878	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr4	152930071	152930072	chr4:152930072:G:C	rs11938366	G	C	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	153083594	153083595	chr4:153083595:G:A	rs13113435	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	153148951	153148952	chr4:153148952:G:A	rs182326045	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	153166367	153166368	chr4:153166368:C:T	rs4696428	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	153465616	153465617	chr4:153465617:G:A	rs9990507	G	A	G	Hoxc9_MA0485.1	1	1	+	10.050357117380742	8.490913543470683	AGCTATAAATCCC
chr4	153767011	153767012	chr4:153767012:G:A	rs13106038	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	153812872	153812873	chr4:153812873:T:C	rs6816337	T	C	.	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr4	153890598	153890599	chr4:153890599:G:T	rs1378934	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	153890623	153890624	chr4:153890624:G:A	rs10009059	G	A	A	Hoxc9_MA0485.1	3	1	-	8.344989484997047	7.456736711974423	AAACGTAAATCAC
chr4	153933438	153933439	chr4:153933439:A:G	rs4411966	A	G	G	Hoxc9_MA0485.1	4	1	+	8.633635758611977	7.465872044620393	GCCAATCAATCAA
chr4	154010026	154010027	chr4:154010027:C:A	rs13105395	C	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	154077104	154077105	chr4:154077105:A:G	rs4696198	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	154471322	154471323	chr4:154471323:A:T	rs4696580	A	T	A	Hoxc9_MA0485.1	5	1	-	9.050298585483278	2.1517556097636827	TGCAATAAATAAC
chr4	154560358	154560359	chr4:154560359:G:A	rs4333166	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	154618943	154618944	chr4:154618944:T:C	rs112118219	T	C	T	Hoxc9_MA0485.1	6	1	-	8.713549909489677	5.6793441429802565	GGCTTTAAATCAT
chr4	155038652	155038653	chr4:155038653:C:A	rs76989278	C	A	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	155338257	155338258	chr4:155338258:G:A	rs7655819	G	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	155506415	155506416	chr4:155506416:G:T	rs34524393	G	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	155599328	155599329	chr4:155599329:C:T	rs77869560	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	155630907	155630908	chr4:155630908:T:A	rs4691805	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	155642165	155642166	chr4:155642166:G:A	rs72683774	G	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	155654090	155654091	chr4:155654091:C:T	rs12506280	C	T	C	Hoxc9_MA0485.1	2	1	+	7.902506406390399	6.525487929229176	CCCTATAAATCCT
chr4	155735211	155735212	chr4:155735212:G:C	rs538559331	G	C	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr4	155840223	155840224	chr4:155840224:C:T	rs11100013	C	T	c	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	155881716	155881717	chr4:155881717:C:T	rs549123624	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	155906748	155906749	chr4:155906749:G:A	rs141897047	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	155954890	155954891	chr4:155954891:C:T	rs72683506	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	156036754	156036755	chr4:156036755:G:T	rs11100031	G	T	-	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	156046742	156046743	chr4:156046743:T:A	rs4305470	T	A	-	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr4	156298523	156298524	chr4:156298524:C:T	rs770100825	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	156694557	156694558	chr4:156694558:G:A	rs72698457	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	156710941	156710942	chr4:156710942:C:T	rs76457330	C	T	C	Hoxc9_MA0485.1	12	1	+	9.176383307833065	8.922386354068513	GTTTATAAATCAC
chr4	156751753	156751754	chr4:156751754:G:A	rs10016337	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	157271370	157271371	chr4:157271371:G:T	rs868394608	G	T	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	157460715	157460716	chr4:157460716:C:T	rs62330113	C	T	T	Hoxc9_MA0485.1	2	1	+	10.199015679658674	8.821997202497451	AGCAATAAATTAT
chr4	157879193	157879194	chr4:157879194:C:T	rs34898363	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	157996890	157996891	chr4:157996891:G:A	rs11100145	G	A	g	Hoxc9_MA0485.1	1	1	+	10.482676862359346	8.923233288449286	GGCAATAAATCCT
chr4	157996916	157996917	chr4:157996917:A:G	rs895735247	A	G	a	Hoxc9_MA0485.1	27	0	+	0	0	.
chr4	158353746	158353747	chr4:158353747:A:G	rs58794003	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr4	158938408	158938409	chr4:158938409:G:A	rs74656399	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	158969768	158969769	chr4:158969769:C:G	rs6849801	C	G	c	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	159152386	159152387	chr4:159152387:T:C	rs13126041	T	C	c	Hoxc9_MA0485.1	22	0	+	0	0	.
chr4	159166334	159166335	chr4:159166335:G:A	rs112795845	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	159547164	159547165	chr4:159547165:G:T	rs62339593	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	159794760	159794761	chr4:159794761:C:T	rs17038867	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	159954367	159954368	chr4:159954368:A:T	rs10031385	A	T	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr4	160353133	160353134	chr4:160353134:C:T	rs294507	C	T	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	160811184	160811185	chr4:160811185:T:A	rs6536540	T	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	161097749	161097750	chr4:161097750:A:G	rs10021900	A	G	a	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	161208691	161208692	chr4:161208692:G:A	rs13110266	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr4	161237141	161237142	chr4:161237142:A:G	rs1444278	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	161823106	161823107	chr4:161823107:G:A	rs149528481	G	A	g	Hoxc9_MA0485.1	2	1	-	12.27354396638757	10.896525489226345	AGCCATAAATCAG
chr4	161930300	161930301	chr4:161930301:T:C	rs359490	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	162627890	162627891	chr4:162627891:G:A	rs195962	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	162740538	162740539	chr4:162740539:C:T	rs11947901	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr4	163548989	163548990	chr4:163548990:C:T	chr4:163548990:C:T	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	163731773	163731774	chr4:163731774:C:T	rs4691101	C	T	T	Hoxc9_MA0485.1	3	1	+	7.772561947398594	6.884309174375971	TGCCGTTAATCAC
chr4	163954600	163954601	chr4:163954601:T:G	rs35624441	T	G	t	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	164177205	164177206	chr4:164177206:T:C	rs7697191	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	164526958	164526959	chr4:164526959:C:T	rs74356363	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr4	164748705	164748706	chr4:164748706:A:C	rs62352370	A	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr4	165463214	165463215	chr4:165463215:C:T	rs6536915	C	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	165707988	165707989	chr4:165707989:C:A	rs17632397	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	166280789	166280790	chr4:166280790:A:G	rs391309	A	G	A	Hoxc9_MA0485.1	8	1	+	9.106388206660373	2.2044296965254135	ACCAGTAAATCAA
chr4	166481290	166481291	chr4:166481291:C:T	rs11731744	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	166494014	166494015	chr4:166494015:C:G	rs9998119	C	G	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	166652003	166652004	chr4:166652004:C:A	rs75768685	C	A	C	Hoxc9_MA0485.1	4	1	-	9.529641249830334	7.028789721505318	AACAGTAAATCAC
chr4	166972207	166972208	chr4:166972208:G:A	rs143759131	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr4	167883496	167883497	chr4:167883497:T:C	rs559493774	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	168058164	168058165	chr4:168058165:C:A	rs11132004	C	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr4	168367273	168367274	chr4:168367274:G:A	rs2684360	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	168506234	168506235	chr4:168506235:A:G	rs12648051	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	168560955	168560956	chr4:168560956:A:G	rs79905534	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr4	168611331	168611332	chr4:168611332:A:G	rs12648174	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	168713282	168713283	chr4:168713283:T:G	rs4635780	T	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr4	168720731	168720732	chr4:168720732:A:C	rs17542402	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	168801840	168801841	chr4:168801841:A:G	rs17614822	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr4	168881413	168881414	chr4:168881414:C:A	rs184538527	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr4	168881414	168881415	chr4:168881415:G:A	rs1048164539	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	168928085	168928086	chr4:168928086:G:A	rs1136603	G	A	G	Hoxc9_MA0485.1	2	1	-	7.968477158701634	6.59145868154041	GCCTATTAATCAC
chr4	169014729	169014730	chr4:169014730:G:A	rs1458292	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	169071094	169071095	chr4:169071095:C:T	rs4692696	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr4	169071100	169071101	chr4:169071101:C:G	rs10009830	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr4	169078587	169078588	chr4:169078588:G:T	rs35281738	G	T	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr4	169555420	169555421	chr4:169555421:G:C	rs10027406	G	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	169919575	169919576	chr4:169919576:C:T	rs79183989	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr4	170014602	170014603	chr4:170014603:T:C	rs17628613	T	C	t	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	170128763	170128764	chr4:170128764:G:A	rs2101065	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	170128771	170128772	chr4:170128772:T:C	rs113031122	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr4	170138853	170138854	chr4:170138854:T:C	rs112632786	T	C	T	Hoxc9_MA0485.1	12	1	-	8.53240354862983	8.6580839054633	AACTGTAAATCAA
chr4	170652668	170652669	chr4:170652669:C:G	rs28635058	C	G	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	171285188	171285189	chr4:171285189:G:A	rs62325878	G	A	G	Hoxc9_MA0485.1	1	1	+	8.700093152847806	7.140649578937745	TGCAATGAATCAC
chr4	171565180	171565181	chr4:171565181:A:G	rs6553576	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr4	172143629	172143630	chr4:172143630:T:C	rs7678546	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr4	172245719	172245720	chr4:172245720:C:T	rs115956875	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr4	173047009	173047010	chr4:173047010:A:G	rs144970655	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	173153443	173153444	chr4:173153444:T:G	rs2006808	T	G	T	Hoxc9_MA0485.1	5	1	+	9.27709979069694	2.378556814977347	TCCCATAAATCCC
chr4	173168173	173168174	chr4:173168174:A:G	rs571924780	A	G	A	Hoxc9_MA0485.1	0	1	+	11.385291193364944	11.918106326655947	AGCTATAAATCAG
chr4	173186385	173186386	chr4:173186386:T:C	rs13151627	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr4	173227959	173227960	chr4:173227960:A:G	rs13150320	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	173252558	173252559	chr4:173252559:C:G	chr4:173252559:C:G	C	G	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	173448756	173448757	chr4:173448757:C:T	rs1561792	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr4	173448775	173448776	chr4:173448776:C:A	rs12511985	C	A	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	173531561	173531562	chr4:173531562:G:A	rs79574846	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr4	173685658	173685659	chr4:173685659:C:A	rs75002406	C	A	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr4	173708158	173708159	chr4:173708159:A:G	rs75291101	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	174011425	174011426	chr4:174011426:A:G	rs4362799	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	174024105	174024106	chr4:174024106:C:T	rs13113162	C	T	C	Hoxc9_MA0485.1	12	1	+	8.16411426999724	7.9101173162326885	AGAAATCAATCAC
chr4	174153614	174153615	chr4:174153615:A:G	rs4695772	A	G	G	Hoxc9_MA0485.1	4	1	-	8.96754686325423	7.498235424321169	GGCTTTAAATCAC
chr4	174189818	174189819	chr4:174189819:C:T	rs12643048	C	T	C	Hoxc9_MA0485.1	6	1	+	8.37057210303878	7.015178932832245	AACTATCAATCAC
chr4	174229011	174229012	chr4:174229012:A:G	rs17060409	A	G	G	Hoxc9_MA0485.1	4	1	+	9.368386966182445	8.200623252190862	GCCCATCAATCAA
chr4	174389145	174389146	chr4:174389146:G:C	rs4131103	G	C	C	Hoxc9_MA0485.1	2	1	-	8.715258818649007	6.019374676927697	AGCAATAAATATC
chr4	174718099	174718100	chr4:174718100:G:T	rs10035036	G	T	T	Hoxc9_MA0485.1	0	1	+	11.893399447667672	10.83803469600192	GGTCATAAATCAT
chr4	174718287	174718288	chr4:174718288:T:C	rs7658547	T	C	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	174841892	174841893	chr4:174841893:A:T	rs7692365	A	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	175068637	175068638	chr4:175068638:T:C	rs72698605	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	176052844	176052845	chr4:176052845:C:T	rs77552758	C	T	C	Hoxc9_MA0485.1	2	1	+	8.05237083782885	6.675352360667626	AGCCATAAAACTT
chr4	176067680	176067681	chr4:176067681:T:C	rs6814389	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	176084891	176084892	chr4:176084892:T:C	rs12641442	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	176325136	176325137	chr4:176325137:G:C	rs1840270	G	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr4	176451601	176451602	chr4:176451602:G:A	rs2167096	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	176789394	176789395	chr4:176789395:A:G	rs716712	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	176834037	176834038	chr4:176834038:A:G	rs9993193	A	G	G	Hoxc9_MA0485.1	9	1	-	10.578329247497521	3.6901034331238898	GGCTATAAATTAT
chr4	177354065	177354066	chr4:177354066:T:C	rs13140743	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	177389611	177389612	chr4:177389612:T:G	rs13108563	T	G	T	Hoxc9_MA0485.1	4	1	-	8.061110969226467	2.9231842879768077	TGTCATCAATCTC
chr4	177451620	177451621	chr4:177451621:A:G	rs6832802	A	G	A	Hoxc9_MA0485.1	11	1	+	10.221623833045	5.809090434176631	ACTCATAAATCAT
chr4	177500240	177500241	chr4:177500241:G:C	rs2333646	G	C	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	177586624	177586625	chr4:177586625:G:C	rs1920966	G	C	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr4	177644934	177644935	chr4:177644935:C:T	rs34991612	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	178165400	178165401	chr4:178165401:G:A	rs144294557	G	A	G	Hoxc9_MA0485.1	1	1	-	6.732379320631707	5.788579481386841	GCCCGCAAATCAC
chr4	178347023	178347024	chr4:178347024:A:G	rs6814432	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	178614496	178614497	chr4:178614497:G:A	rs1036314	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr4	178646828	178646829	chr4:178646829:C:T	rs28773337	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr4	179080300	179080301	chr4:179080301:G:T	rs7687838	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr4	179569842	179569843	chr4:179569843:C:T	rs3905711	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr4	179595902	179595903	chr4:179595903:C:T	rs68158635	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	179802016	179802017	chr4:179802017:T:C	rs35674693	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	179958106	179958107	chr4:179958107:G:A	rs10030286	G	A	N	Hoxc9_MA0485.1	6	1	+	7.547412726443604	10.581618492953025	GCCCATGAATTAC
chr4	180164940	180164941	chr4:180164941:A:T	rs1026073	A	T	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	180437535	180437536	chr4:180437536:T:C	rs75074493	T	C	C	Hoxc9_MA0485.1	6	1	-	7.880246436667939	4.846040670158517	ACACATAAATCCC
chr4	180521289	180521290	chr4:180521290:A:C	rs6851872	A	C	C	Hoxc9_MA0485.1	3	1	+	8.108784426756795	8.843535634327264	AGTAATAAATCCG
chr4	180675221	180675222	chr4:180675222:A:G	rs868343363	A	G	A	Hoxc9_MA0485.1	4	1	+	8.439259780342132	7.271496066350548	GAATATAAATCAG
chr4	180699093	180699094	chr4:180699094:G:A	rs12642879	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr4	181030532	181030533	chr4:181030533:C:G	rs4273513	C	G	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr4	181030862	181030863	chr4:181030863:A:G	rs112436841	A	G	-	Hoxc9_MA0485.1	4	1	+	8.50458699230768	7.336823278316097	AGCAATGAATCAG
chr4	181030871	181030872	chr4:181030872:G:A	rs192633533	G	A	-	Hoxc9_MA0485.1	13	0	+	0	0	.
chr4	181030889	181030890	chr4:181030890:C:A	rs4861461	C	A	-	Hoxc9_MA0485.1	31	0	+	0	0	.
chr4	181281345	181281346	chr4:181281346:T:C	rs6831337	T	C	T	Hoxc9_MA0485.1	8	1	-	9.625504718208594	2.7235462080736372	GGTCATAAATTAG
chr4	181524708	181524709	chr4:181524709:G:A	rs75458674	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	181528579	181528580	chr4:181528580:G:A	rs77524296	G	A	A	Hoxc9_MA0485.1	0	1	+	8.867051474941832	8.33423634165083	GGCATTAAATCAT
chr4	181701564	181701565	chr4:181701565:T:C	rs7679830	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	181754090	181754091	chr4:181754091:G:A	rs4400033	G	A	G	Hoxc9_MA0485.1	1	1	+	10.862741574990194	9.303298001080133	TGCTATAAATCAG
chr4	182105747	182105748	chr4:182105748:C:T	rs7673611	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr4	182210072	182210073	chr4:182210073:C:G	rs188676712	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	182224091	182224092	chr4:182224092:T:A	rs17072897	T	A	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr4	182240133	182240134	chr4:182240134:A:C	rs7663302	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr4	182576702	182576703	chr4:182576703:G:A	rs7670017	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr4	182584368	182584369	chr4:182584369:C:G	rs13107775	C	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr4	182892271	182892272	chr4:182892272:C:T	rs12507552	C	T	T	Hoxc9_MA0485.1	10	1	+	8.591108224669927	6.7872723203611764	TGCCATGAATCAA
chr4	183030431	183030432	chr4:183030432:T:C	rs747368	T	C	t	Hoxc9_MA0485.1	6	1	-	8.486811218997435	5.452605452488015	GACAGTAAATCTG
chr4	183262469	183262470	chr4:183262470:G:C	rs17291527	G	C	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	183355523	183355524	chr4:183355524:T:A	rs28654914	T	A	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	183439163	183439164	chr4:183439164:A:C	chr4:183439164:A:C	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	183443447	183443448	chr4:183443448:G:A	rs4241771	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr4	183610255	183610256	chr4:183610256:A:G	rs10012103	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr4	183728650	183728651	chr4:183728651:G:A	rs6841284	G	A	g	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr4	184110407	184110408	chr4:184110408:A:C	rs58437705	A	C	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	184257066	184257067	chr4:184257067:C:T	rs4862344	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	184270385	184270386	chr4:184270386:T:C	rs562725471	T	C	t	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	184563724	184563725	chr4:184563725:A:C	rs35493127	A	C	A	Hoxc9_MA0485.1	0	1	+	9.882592359370252	9.127699083476132	AGTTATAAATCAA
chr4	184563743	184563744	chr4:184563744:A:G	rs67797822	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr4	184592720	184592721	chr4:184592721:T:A	rs6842425	T	A	T	Hoxc9_MA0485.1	9	1	+	10.622712580383652	6.795070011883629	TGCAATAAATCTT
chr4	184618744	184618745	chr4:184618745:T:A	rs2091476	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	184618747	184618748	chr4:184618748:G:A	rs2141256	G	A	-	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	184714156	184714157	chr4:184714157:C:T	rs7679215	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr4	184855304	184855305	chr4:184855305:G:A	rs6825400	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr4	184855322	184855323	chr4:184855323:G:A	rs144840707	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr4	184915103	184915104	chr4:184915104:T:C	rs4862464	T	C	T	Hoxc9_MA0485.1	4	1	-	8.830925348954224	7.663161634962641	CACAATAAATCTT
chr4	184937476	184937477	chr4:184937477:C:T	rs6838025	C	T	C	Hoxc9_MA0485.1	2	1	+	8.493659245543334	7.116640768382109	GCCCATGAATCTC
chr4	184937492	184937493	chr4:184937493:G:C	rs6838366	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	185245007	185245008	chr4:185245008:G:A	rs3108258	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr4	185377269	185377270	chr4:185377270:G:A	rs28621464	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr4	185810718	185810719	chr4:185810719:A:G	rs73017857	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr4	186030763	186030764	chr4:186030764:T:C	rs116709862	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr4	186088949	186088950	chr4:186088950:C:T	rs4608848	C	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	186158028	186158029	chr4:186158029:G:A	rs12504044	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr4	186641523	186641524	chr4:186641524:G:A	rs114083248	G	A	G	Hoxc9_MA0485.1	6	1	-	8.736275257686652	7.380882087480116	TACCATCAATCAC
chr4	186677301	186677302	chr4:186677302:T:C	rs456000	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr4	186821931	186821932	chr4:186821932:C:T	rs75718659	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr4	186821943	186821944	chr4:186821944:C:G	rs12646515	C	G	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr4	186980423	186980424	chr4:186980424:T:C	rs7669920	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr4	186980426	186980427	chr4:186980427:T:A	rs146706384	T	A	T	Hoxc9_MA0485.1	11	1	-	8.915684897572088	8.058095512363066	AGAAGTAAATCAT
chr4	187048012	187048013	chr4:187048013:G:A	rs34031283	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr4	187176313	187176314	chr4:187176314:G:A	rs13113128	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr4	187283520	187283521	chr4:187283521:A:G	rs1462079	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	187426240	187426241	chr4:187426241:A:G	rs978629	A	G	A	Hoxc9_MA0485.1	9	1	-	8.810821441647624	1.922595627273991	TCTTATAAATCAT
chr4	187491885	187491886	chr4:187491886:G:A	rs55638592	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr4	187491906	187491907	chr4:187491907:G:A	rs56177432	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr4	188400462	188400463	chr4:188400463:T:A	rs10000056	T	A	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr4	188459491	188459492	chr4:188459492:T:A	rs9996689	T	A	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr4	188869867	188869868	chr4:188869868:T:C	rs62341821	T	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr4	189022559	189022560	chr4:189022560:A:C	rs74609709	A	C	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	189423696	189423697	chr4:189423697:C:T	rs9994370	C	T	c	Hoxc9_MA0485.1	31	0	-	0	0	.
chr4	189515339	189515340	chr4:189515340:C:T	rs2044852	C	T	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr4	190108238	190108239	chr4:190108239:T:C	rs1462940962	T	C	.	Hoxc9_MA0485.1	4	1	-	7.28108476760036	6.113321053608775	GCCCATTAATCTG
chr4	190108253	190108254	chr4:190108254:G:T	rs1163957072	G	T	.	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	57427	57428	chr5:57428:A:T	rs77989352	A	T	.	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	317360	317361	chr5:317361:C:T	rs183673588	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	317362	317363	chr5:317363:T:C	chr5:317363:T:C	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	317366	317367	chr5:317367:C:T	rs977371366	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	317404	317405	chr5:317405:T:C	rs55847527	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	582553	582554	chr5:582554:A:G	rs56278696	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	1100183	1100184	chr5:1100184:T:C	rs117286240	T	C	T	Hoxc9_MA0485.1	5	1	+	7.9294879629962205	3.4441766003577343	GCCCGTGAATCAT
chr5	1138158	1138159	chr5:1138159:T:C	rs4131150	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr5	1517123	1517124	chr5:1517124:T:A	rs114656258	T	A	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	1566854	1566855	chr5:1566855:C:T	rs4975661	C	T	C	Hoxc9_MA0485.1	6	1	+	7.1037684953659594	5.748375325159424	TCCCATCAATCCC
chr5	1677209	1677210	chr5:1677210:G:C	rs57419172	G	C	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	1689515	1689516	chr5:1689516:T:C	rs2047590	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	1787211	1787212	chr5:1787212:C:T	rs58370287	C	T	C	Hoxc9_MA0485.1	0	1	-	9.217851571273995	8.685036437982992	GCCTGTAAATCTT
chr5	1800743	1800744	chr5:1800744:A:G	rs972892	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	1829786	1829787	chr5:1829787:C:T	rs13178976	C	T	c	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	1842457	1842458	chr5:1842458:T:C	rs736228	T	C	T	Hoxc9_MA0485.1	1	1	-	9.699700054499543	11.259143628409603	GATTATAAATCAC
chr5	2078729	2078730	chr5:2078730:A:T	rs72708669	A	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	2173733	2173734	chr5:2173734:A:G	rs13162547	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	2191224	2191225	chr5:2191225:C:T	rs13181974	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	2611881	2611882	chr5:2611882:A:G	rs10512677	A	G	a	Hoxc9_MA0485.1	0	1	+	10.90883942472591	11.441654558016912	ATCCATAAATCAC
chr5	2635776	2635777	chr5:2635777:A:G	rs6555117	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	2640008	2640009	chr5:2640009:A:G	rs2897047	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	2679396	2679397	chr5:2679397:A:G	rs7704762	A	G	G	Hoxc9_MA0485.1	3	1	+	7.982087947374709	3.200442682959486	GCCATTAAATCAC
chr5	2801440	2801441	chr5:2801441:C:G	rs7706770	C	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	2885570	2885571	chr5:2885571:T:C	rs1874061	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	2908501	2908502	chr5:2908502:G:A	rs1565808	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	2983966	2983967	chr5:2983967:C:A	rs6861422	C	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	3060796	3060797	chr5:3060797:G:C	rs6555172	G	C	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	3060928	3060929	chr5:3060929:C:T	rs138512628	C	T	C	Hoxc9_MA0485.1	0	1	+	10.334191547846277	10.566535205365645	CGCAGTAAATCAC
chr5	3109614	3109615	chr5:3109615:G:A	rs72729387	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	3130527	3130528	chr5:3130528:C:T	rs17551686	C	T	C	Hoxc9_MA0485.1	12	1	+	8.96754686325423	8.713549909489677	GGCTTTAAATCAC
chr5	3200472	3200473	chr5:3200473:A:G	rs2404272	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	3252162	3252163	chr5:3252163:C:G	rs16871498	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	3252179	3252180	chr5:3252180:A:G	rs61528849	A	G	G	Hoxc9_MA0485.1	6	1	+	7.720176130307307	4.6859703637978845	TGGCATAAATCCC
chr5	3253902	3253903	chr5:3253903:G:A	rs4302592	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	3310957	3310958	chr5:3310958:G:A	rs115188022	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	3321943	3321944	chr5:3321944:G:T	rs62338559	G	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	3364750	3364751	chr5:3364751:T:A	rs57580990	T	A	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	3397443	3397444	chr5:3397444:G:A	rs924609	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	3574449	3574450	chr5:3574450:C:T	rs6867471	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	3598310	3598311	chr5:3598311:T:C	rs34456157	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	3639332	3639333	chr5:3639333:T:G	chr5:3639333:T:G	T	G	t	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	3734057	3734058	chr5:3734058:T:C	rs955077	T	C	C	Hoxc9_MA0485.1	11	1	-	8.429205969231953	4.016672570363584	AGCAATAAAACAC
chr5	3734745	3734746	chr5:3734746:G:A	rs6876695	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	3734748	3734749	chr5:3734749:T:G	rs6862805	T	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	3836306	3836307	chr5:3836307:T:A	rs140314146	T	A	T	Hoxc9_MA0485.1	0	1	+	9.8794718329477	10.402021451322451	TGCTATAAATCTA
chr5	4001240	4001241	chr5:4001241:G:A	rs10058753	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	4124122	4124123	chr5:4124123:G:C	rs6876467	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	4356335	4356336	chr5:4356336:C:T	rs155034	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	4480977	4480978	chr5:4480978:G:A	rs4257741	G	A	G	Hoxc9_MA0485.1	1	1	-	8.450583151181945	7.506783311937082	ACCCATAAATAAG
chr5	4646989	4646990	chr5:4646990:G:T	rs10045887	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	4738108	4738109	chr5:4738109:T:C	rs1393120	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	4929650	4929651	chr5:4929651:T:A	rs73036163	T	A	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	5138627	5138628	chr5:5138628:C:T	rs11134093	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	5166584	5166585	chr5:5166585:G:T	rs755573	G	T	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	5361355	5361356	chr5:5361356:G:T	rs2964459	G	T	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	5422319	5422320	chr5:5422320:C:T	rs538817586	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	5422323	5422324	chr5:5422324:C:G	rs1001219774	C	G	c	Hoxc9_MA0485.1	2	1	+	10.93558325828824	8.239699116566932	AGCTGTAAATCAC
chr5	5422345	5422346	chr5:5422346:T:C	rs151085383	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	5584755	5584756	chr5:5584756:A:C	rs16875803	A	C	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	5588585	5588586	chr5:5588586:T:C	rs26426	T	C	C	Hoxc9_MA0485.1	11	1	-	10.12018314707793	5.707649748209559	GCTTATAAATCAC
chr5	5598711	5598712	chr5:5598712:T:C	rs538412487	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	5615814	5615815	chr5:5615815:T:A	rs411052	T	A	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	5798739	5798740	chr5:5798740:C:T	rs32558	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	6030605	6030606	chr5:6030606:A:G	rs10069535	A	G	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	6601384	6601385	chr5:6601385:C:G	rs3776442	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr5	6604025	6604026	chr5:6604026:A:C	rs76534720	A	C	A	Hoxc9_MA0485.1	7	1	+	9.46386327568015	2.559634206474573	AGCCATAAATAAA
chr5	6624281	6624282	chr5:6624282:G:A	rs62348980	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	6645044	6645045	chr5:6645045:A:G	rs8192181	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr5	6645049	6645050	chr5:6645050:G:A	rs8192182	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	7208951	7208952	chr5:7208952:A:G	rs10062299	A	G	G	Hoxc9_MA0485.1	1	1	-	8.640447648119512	9.584247487364378	TTCTATAAATCTC
chr5	7271908	7271909	chr5:7271909:A:G	rs62341785	A	G	A	Hoxc9_MA0485.1	9	1	+	8.02499669547075	4.964413449597141	ACCCATAAAACAC
chr5	7305415	7305416	chr5:7305416:C:T	rs60281318	C	T	c	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	7445252	7445253	chr5:7445253:G:A	rs7715966	G	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	7525809	7525810	chr5:7525810:A:G	rs78880833	A	G	A	Hoxc9_MA0485.1	9	1	-	9.278591122091859	2.3903653077182265	TATCATAAATCAT
chr5	7712586	7712587	chr5:7712587:A:G	rs7704763	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	7785161	7785162	chr5:7785162:C:T	rs12518369	C	T	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	8175854	8175855	chr5:8175855:G:A	rs730757	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	8288012	8288013	chr5:8288013:C:A	rs79574392	C	A	C	Hoxc9_MA0485.1	2	1	+	9.553627883645369	7.634224911241614	TGCCATAAATTTT
chr5	8289085	8289086	chr5:8289086:T:C	rs4555755	T	C	T	Hoxc9_MA0485.1	5	1	+	7.301583403090036	2.816272040451552	GGCCGTAAATGAT
chr5	8601681	8601682	chr5:8601682:A:C	rs2859843	A	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	8810913	8810914	chr5:8810914:T:C	rs3105426	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	8937052	8937053	chr5:8937053:A:G	rs2962650	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	9164860	9164861	chr5:9164861:A:G	rs3822769	A	G	A	Hoxc9_MA0485.1	8	1	+	9.758674359645651	2.856715849510693	GGAAATAAATCTT
chr5	9209833	9209834	chr5:9209834:T:A	rs1805963	T	A	A	Hoxc9_MA0485.1	9	1	+	8.357591127443118	4.529948558943094	ACACATAAATCTG
chr5	9505731	9505732	chr5:9505732:T:A	rs952098202	T	A	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	9562491	9562492	chr5:9562492:T:G	rs890946	T	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	9733663	9733664	chr5:9733664:G:A	rs376461374	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr5	9830166	9830167	chr5:9830167:A:C	rs10454957	A	C	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	9894736	9894737	chr5:9894737:G:A	rs79735379	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	9925801	9925802	chr5:9925802:G:A	rs68003943	G	A	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	9925820	9925821	chr5:9925821:A:T	rs72734863	A	T	A	Hoxc9_MA0485.1	9	1	-	8.055129341819361	4.2274867733193355	AGACATCAATCAA
chr5	10118430	10118431	chr5:10118431:A:T	rs114858444	A	T	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	10121121	10121122	chr5:10121122:A:G	rs16884171	A	G	A	Hoxc9_MA0485.1	8	1	+	6.86577222062398	-0.036186289510979075	GGCCACCAATCAC
chr5	10233875	10233876	chr5:10233876:G:A	rs11133604	G	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	10258012	10258013	chr5:10258013:G:A	rs2457156	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	10271939	10271940	chr5:10271940:G:A	rs75241039	G	A	G	Hoxc9_MA0485.1	0	1	+	8.528048685793683	7.995233552502679	GTCTGTAAATCTC
chr5	10308109	10308110	chr5:10308110:A:C	rs74655025	A	C	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	10308121	10308122	chr5:10308122:C:T	chr5:10308122:C:T	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	10308127	10308128	chr5:10308128:G:A	rs10072686	G	A	G	Hoxc9_MA0485.1	10	1	-	8.440698325657417	6.6368624213486624	GCACGTAAATCTC
chr5	10309531	10309532	chr5:10309532:C:G	rs11749268	C	G	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	10309534	10309535	chr5:10309535:G:C	rs11959312	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	10504192	10504193	chr5:10504193:C:T	rs571864014	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	10507726	10507727	chr5:10507727:C:T	rs80256610	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	10509645	10509646	chr5:10509646:A:G	rs28727891	A	G	G	Hoxc9_MA0485.1	3	1	+	8.471460949289542	3.6898156848743193	TGTAGTAAATCAG
chr5	10606206	10606207	chr5:10606207:T:C	rs12187105	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	10632702	10632703	chr5:10632703:G:A	rs114258930	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	10640780	10640781	chr5:10640781:G:A	rs11133618	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	10664465	10664466	chr5:10664466:A:G	rs12523335	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	10664465	10664466	chr5:10664466:A:T	chr5:10664466:A:T	A	T	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	10665146	10665147	chr5:10665147:C:T	rs11954194	C	T	c	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	10734336	10734337	chr5:10734337:G:C	rs572683423	G	C	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	10734534	10734535	chr5:10734535:G:A	rs2918386	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	10874531	10874532	chr5:10874532:T:C	rs6860830	T	C	t	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	10913728	10913729	chr5:10913729:T:C	rs10058973	T	C	T	Hoxc9_MA0485.1	4	1	-	7.89685378916779	6.729090075176207	GGCTACAAATCAT
chr5	10982863	10982864	chr5:10982864:A:G	rs7733042	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	11114294	11114295	chr5:11114295:G:T	rs11133641	G	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	11162612	11162613	chr5:11162613:T:C	rs2057794	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr5	11584229	11584230	chr5:11584230:T:C	rs2190989	T	C	T	Hoxc9_MA0485.1	9	1	+	9.050298585483278	2.1620727711096457	TGCAATAAATAAC
chr5	12109387	12109388	chr5:12109388:A:G	rs10045344	A	G	A	Hoxc9_MA0485.1	4	1	+	9.619389786413345	8.451626072421762	AGAAATAAATCAG
chr5	12109415	12109416	chr5:12109416:A:G	rs75709564	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	12662779	12662780	chr5:12662780:A:G	rs6887002	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	12662797	12662798	chr5:12662798:T:A	rs6868308	T	A	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	12662814	12662815	chr5:12662815:G:A	rs6887427	G	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	13108407	13108408	chr5:13108408:T:G	rs4702918	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	13250118	13250119	chr5:13250119:G:A	rs771112502	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	13326363	13326364	chr5:13326364:T:A	rs11742890	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	13480986	13480987	chr5:13480987:G:A	rs6554794	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	13529522	13529523	chr5:13529523:T:C	rs182780630	T	C	T	Hoxc9_MA0485.1	9	1	+	8.806973102061468	1.9187472876878362	GGCTGTAAATTTC
chr5	13529529	13529530	chr5:13529530:A:C	rs17506868	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	14025742	14025743	chr5:14025743:G:A	rs10462718	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	14174109	14174110	chr5:14174110:G:C	rs26117	G	C	G	Hoxc9_MA0485.1	10	1	-	9.435890369916912	4.634819562169635	CTCCATAAATCAG
chr5	14178957	14178958	chr5:14178958:G:A	chr5:14178958:G:A	G	A	G	Hoxc9_MA0485.1	12	1	+	9.23933819987815	9.11365784304468	AGCCATGAATCAG
chr5	14246256	14246257	chr5:14246257:T:C	rs6554848	T	C	t	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	14457965	14457966	chr5:14457966:G:T	rs16903523	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	14478491	14478492	chr5:14478492:G:A	rs6882373	G	A	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	14816512	14816513	chr5:14816513:T:C	rs27353	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	14993348	14993349	chr5:14993349:A:G	rs147014922	A	G	a	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	15003753	15003754	chr5:15003754:G:C	rs138323916	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	15117056	15117057	chr5:15117057:G:A	rs112889558	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	15334504	15334505	chr5:15334505:A:T	rs56775717	A	T	.	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	15694883	15694884	chr5:15694884:G:A	rs16867566	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	15694922	15694923	chr5:15694923:G:A	rs74691240	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	15834846	15834847	chr5:15834847:T:G	chr5:15834847:T:G	T	G	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	16034498	16034499	chr5:16034499:T:A	rs6892600	T	A	A	Hoxc9_MA0485.1	11	1	+	9.304736546395416	10.162325931604439	TCCCGTAAATCTC
chr5	16547536	16547537	chr5:16547537:G:A	rs12187057	G	A	A	Hoxc9_MA0485.1	2	1	-	10.876842838536348	9.499824361375124	GGCCATAAATTAA
chr5	16585099	16585100	chr5:16585100:T:C	rs448021	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	16585125	16585126	chr5:16585126:G:C	rs410514	G	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	16629893	16629894	chr5:16629894:T:C	rs113364233	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	16810520	16810521	chr5:16810521:A:G	rs57125370	A	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	16964962	16964963	chr5:16964963:A:G	rs74699029	A	G	A	Hoxc9_MA0485.1	4	1	+	9.272256787522718	8.104493073531135	TCCCATAAATTAT
chr5	16964988	16964989	chr5:16964989:C:T	rs7734779	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	17097022	17097023	chr5:17097023:C:T	rs77472436	C	T	T	Hoxc9_MA0485.1	2	1	+	9.084922302718777	7.707903825557551	CACAATAAATCTC
chr5	17378154	17378155	chr5:17378155:T:C	rs114822597	T	C	T	Hoxc9_MA0485.1	11	1	-	11.2432046704746	6.830671271606232	GCCTATAAATCAT
chr5	18921735	18921736	chr5:18921736:G:A	rs11951193	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	19776899	19776900	chr5:19776900:T:C	rs55700215	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	19859294	19859295	chr5:19859295:C:G	rs62352167	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	19887834	19887835	chr5:19887835:G:T	rs4582277	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	20007887	20007888	chr5:20007888:C:T	chr5:20007888:C:T	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	20711884	20711885	chr5:20711885:A:G	rs59636641	A	G	-	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	20990284	20990285	chr5:20990285:C:G	rs7714560	C	G	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	21025054	21025055	chr5:21025055:A:T	rs114773525	A	T	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	21238890	21238891	chr5:21238891:A:G	rs6898263	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	21417049	21417050	chr5:21417050:G:A	rs11957493	G	A	.	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	22470121	22470122	chr5:22470122:T:C	rs1424477	T	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	22508804	22508805	chr5:22508805:G:A	rs142398884	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	22591066	22591067	chr5:22591067:G:C	rs199139	G	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	22596643	22596644	chr5:22596644:C:T	rs115007728	C	T	C	Hoxc9_MA0485.1	1	1	-	9.75545790451356	8.1960143306035	GGCAATGAATCAC
chr5	22703026	22703027	chr5:22703027:T:C	rs13161449	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	24087017	24087018	chr5:24087018:C:T	rs7341085	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	24225329	24225330	chr5:24225330:T:C	rs12019314	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	24864681	24864682	chr5:24864682:A:C	rs10737969	A	C	A	Hoxc9_MA0485.1	7	1	+	7.7039513637796935	0.7997222945741144	TCCAATCAATCAG
chr5	24923480	24923481	chr5:24923481:T:G	rs66861538	T	G	T	Hoxc9_MA0485.1	11	1	-	8.076287440652177	6.023297585753096	GGACATTAATCAC
chr5	25191130	25191131	chr5:25191131:T:A	rs72755889	T	A	T	Hoxc9_MA0485.1	5	1	+	10.158653755233326	3.260110779513733	TGCAATAAATCTG
chr5	26613142	26613143	chr5:26613143:T:C	rs62343654	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	27021479	27021480	chr5:27021480:T:C	chr5:27021480:T:C	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	27463165	27463166	chr5:27463166:G:A	rs2329551	G	A	g	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	27820064	27820065	chr5:27820065:C:T	rs7710218	C	T	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	28045454	28045455	chr5:28045455:G:A	rs11954919	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr5	28126864	28126865	chr5:28126865:T:C	rs72746252	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	29234328	29234329	chr5:29234329:T:C	rs34745306	T	C	.	Hoxc9_MA0485.1	15	0	-	0	0	.
chr5	29295844	29295845	chr5:29295845:A:C	rs72745419	A	C	a	Hoxc9_MA0485.1	0	1	-	10.622712580383652	11.678077332049405	TGCAATAAATCTT
chr5	29327803	29327804	chr5:29327804:G:A	rs2195316	G	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	29779510	29779511	chr5:29779511:C:T	rs12520342	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	29811874	29811875	chr5:29811875:A:C	rs12517227	A	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	29951863	29951864	chr5:29951864:C:T	rs10461686	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	30592999	30593000	chr5:30593000:G:A	rs6872269	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	31027952	31027953	chr5:31027953:C:A	rs559922255	C	A	C	Hoxc9_MA0485.1	2	1	+	8.320221041054074	6.400818068650319	AGCCATAAAACAA
chr5	31376379	31376380	chr5:31376380:G:T	rs10940948	G	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	31381871	31381872	chr5:31381872:T:C	rs2161005	T	C	T	Hoxc9_MA0485.1	9	1	+	7.8350912978235465	0.9468654834499153	GGCTATAAATGAC
chr5	31442250	31442251	chr5:31442251:T:C	rs957353002	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	31485558	31485559	chr5:31485559:C:A	rs74709927	C	A	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr5	31631217	31631218	chr5:31631218:C:A	rs60845944	C	A	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	32027777	32027778	chr5:32027778:C:A	rs60852811	C	A	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	32057544	32057545	chr5:32057545:G:A	rs161545	G	A	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	32322867	32322868	chr5:32322868:C:T	rs2963971	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	32439262	32439263	chr5:32439263:C:T	rs4867442	C	T	C	Hoxc9_MA0485.1	12	1	+	7.8215141861819495	7.567517232417399	GCCAGTAAATTTC
chr5	32467812	32467813	chr5:32467813:G:A	rs602162	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	32499982	32499983	chr5:32499983:C:G	rs2594825	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	32833496	32833497	chr5:32833497:C:T	rs12655026	C	T	C	Hoxc9_MA0485.1	12	1	+	9.16688492120854	8.912887967443988	AATTATAAATCAC
chr5	33321140	33321141	chr5:33321141:A:G	rs17638186	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	33343677	33343678	chr5:33343678:T:C	rs7735012	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	33343710	33343711	chr5:33343711:T:C	rs7710613	T	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	33435933	33435934	chr5:33435934:T:G	rs116541001	T	G	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	33444470	33444471	chr5:33444471:T:C	rs10941055	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	33715639	33715640	chr5:33715640:T:C	rs146467364	T	C	T	Hoxc9_MA0485.1	6	1	-	8.865209684408272	5.831003917898852	TGCAGTAAATCTA
chr5	33833034	33833035	chr5:33833035:T:A	rs1423299	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	34466714	34466715	chr5:34466715:C:A	rs6898068	C	A	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	34706215	34706216	chr5:34706216:C:T	rs10036600	C	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	34718237	34718238	chr5:34718238:T:G	rs1545348	T	G	T	Hoxc9_MA0485.1	6	1	-	9.558564781127018	7.385233485796033	AGTTGTAAATCAC
chr5	34865422	34865423	chr5:34865423:A:G	rs13167483	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	35096467	35096468	chr5:35096468:A:C	rs190290133	A	C	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	35096471	35096472	chr5:35096472:G:A	rs552757619	G	A	G	Hoxc9_MA0485.1	0	1	+	7.696565753276304	7.163750619985302	GATCATCAATCAG
chr5	35202996	35202997	chr5:35202997:T:C	rs112204391	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	35203033	35203034	chr5:35203034:C:A	rs547956795	C	A	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	35458428	35458429	chr5:35458429:C:T	rs1605684	C	T	c	Hoxc9_MA0485.1	31	0	-	0	0	.
chr5	35827909	35827910	chr5:35827910:G:A	rs6890572	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	35857601	35857602	chr5:35857602:A:G	rs11567694	A	G	A	Hoxc9_MA0485.1	11	1	-	8.553097287983245	7.357696818293187	TCACATAAATCTC
chr5	35881788	35881789	chr5:35881789:G:T	rs143473524	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	35938699	35938700	chr5:35938700:G:A	rs1417400983	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	35971084	35971085	chr5:35971085:G:A	rs1348705	G	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	36213262	36213263	chr5:36213263:A:C	rs182079579	A	C	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	36371612	36371613	chr5:36371613:C:T	rs6451279	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	36371619	36371620	chr5:36371620:G:A	rs7729385	G	A	A	Hoxc9_MA0485.1	2	1	+	9.435573301775914	10.21205447109347	GCGCATAAATCAT
chr5	36445355	36445356	chr5:36445356:A:C	rs1104824	A	C	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr5	36607675	36607676	chr5:36607676:C:T	rs78992973	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	36607688	36607689	chr5:36607689:C:T	rs4020423	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	36608288	36608289	chr5:36608289:C:T	rs532187788	C	T	c	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	36619628	36619629	chr5:36619629:G:A	rs4869486	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	36630837	36630838	chr5:36630838:G:A	rs1170148314	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	36682638	36682639	chr5:36682639:C:T	rs7726798	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	36835825	36835826	chr5:36835826:T:C	rs13181860	T	C	C	Hoxc9_MA0485.1	5	1	+	7.823060621191282	3.337749258552796	GCCAATAAAACAC
chr5	37086296	37086297	chr5:37086297:T:C	rs186482266	T	C	T	Hoxc9_MA0485.1	4	1	-	9.069873375143619	7.902109661152035	GCCTATCAATCAT
chr5	37370695	37370696	chr5:37370696:A:T	rs189657877	A	T	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	37370706	37370707	chr5:37370707:C:T	rs116689196	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	37599483	37599484	chr5:37599484:A:G	rs55960353	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr5	37616451	37616452	chr5:37616452:C:G	rs11950295	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	37765954	37765955	chr5:37765955:T:C	rs4869547	T	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	37770733	37770734	chr5:37770734:G:A	rs2886725	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	37984970	37984971	chr5:37984971:A:G	rs74818966	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	38018144	38018145	chr5:38018145:C:T	rs16903834	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	38258004	38258005	chr5:38258005:C:T	rs78372354	C	T	C	Hoxc9_MA0485.1	12	1	+	7.2699946480867705	7.01599769432222	AGCCTTAAATCCC
chr5	38378173	38378174	chr5:38378174:G:C	rs2921220	G	C	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	38387326	38387327	chr5:38387327:C:G	rs2246549	C	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	38586648	38586649	chr5:38586649:G:C	rs10040053	G	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	38673761	38673762	chr5:38673762:C:T	chr5:38673762:C:T	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	38768379	38768380	chr5:38768380:A:G	rs7736938	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	38807872	38807873	chr5:38807873:A:G	rs62353356	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	38846036	38846037	chr5:38846037:C:T	rs2292017	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	39175326	39175327	chr5:39175327:G:A	rs115477990	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	39175368	39175369	chr5:39175369:A:T	rs114265891	A	T	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	39266417	39266418	chr5:39266418:G:A	rs16868511	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	39433246	39433247	chr5:39433247:T:G	rs190259482	T	G	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr5	39502652	39502653	chr5:39502653:G:A	rs4957476	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr5	39700849	39700850	chr5:39700850:A:T	rs139287154	A	T	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	40022175	40022176	chr5:40022176:A:G	rs1605202	A	G	A	Hoxc9_MA0485.1	3	1	+	9.564067098958093	4.782421834542872	GGCAGTAAATTAT
chr5	40199556	40199557	chr5:40199557:G:T	rs17223103	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	40220096	40220097	chr5:40220097:A:T	rs72746147	A	T	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	40280762	40280763	chr5:40280763:G:T	rs182161404	G	T	g	Hoxc9_MA0485.1	3	1	-	11.614581268141224	10.879830060570756	AGTCATAAATCAC
chr5	40428698	40428699	chr5:40428699:A:G	rs10512738	A	G	A	Hoxc9_MA0485.1	4	1	+	12.27354396638757	11.105780252395986	AGCCATAAATCAG
chr5	40428708	40428709	chr5:40428709:G:A	rs10042027	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr5	40812274	40812275	chr5:40812275:G:A	rs11956047	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	41113047	41113048	chr5:41113048:T:C	chr5:41113048:T:C	T	C	t	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	41161386	41161387	chr5:41161387:A:T	rs3805716	A	T	A	Hoxc9_MA0485.1	0	1	-	8.599210181323265	9.121759799698015	TACAATAAATCTG
chr5	41291349	41291350	chr5:41291350:A:G	rs75525146	A	G	A	Hoxc9_MA0485.1	8	1	+	7.611718497722763	0.7097599875878042	TGCCATCAATAAC
chr5	41336725	41336726	chr5:41336726:T:C	rs765176	T	C	C	Hoxc9_MA0485.1	8	1	-	8.644868523803158	1.7429100136681979	AGACATCAATCAT
chr5	41600888	41600889	chr5:41600889:C:T	rs75477097	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	41873628	41873629	chr5:41873629:G:A	rs7728482	G	A	A	Hoxc9_MA0485.1	1	1	+	10.029366742065793	8.469923168155733	GGACATAAATCTG
chr5	42586774	42586775	chr5:42586775:G:A	rs142270692	G	A	A	Hoxc9_MA0485.1	4	1	+	7.518609493783694	8.686373207775278	GGCCGTGAATTAC
chr5	43515595	43515596	chr5:43515596:A:G	rs370922775	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	43633623	43633624	chr5:43633624:A:G	rs13166593	A	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	43730805	43730806	chr5:43730806:G:A	rs11737988	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	44570671	44570672	chr5:44570672:A:G	rs4273616	A	G	G	Hoxc9_MA0485.1	5	1	-	9.724029107744002	5.238717745105517	GCCCATAAATTTC
chr5	45029764	45029765	chr5:45029765:C:G	rs7716101	C	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	45537196	45537197	chr5:45537197:T:G	rs10073636	T	G	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	45926990	45926991	chr5:45926991:G:A	rs531330167	G	A	.	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	50968337	50968338	chr5:50968338:C:T	rs250233	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	51382315	51382316	chr5:51382316:G:A	rs36216896	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	51382335	51382336	chr5:51382336:C:T	rs36216895	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	51400023	51400024	chr5:51400024:T:A	rs113923531	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr5	51400042	51400043	chr5:51400043:G:A	rs6895297	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	51934491	51934492	chr5:51934492:C:A	rs4865524	C	A	C	Hoxc9_MA0485.1	1	1	-	7.593483121436599	5.510722800860063	GGCCATGAATCCA
chr5	52268048	52268049	chr5:52268049:G:A	rs10079174	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	52269401	52269402	chr5:52269402:G:A	rs7703314	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	52608933	52608934	chr5:52608934:A:G	rs830906	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	52690666	52690667	chr5:52690667:T:C	rs77317050	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	52690686	52690687	chr5:52690687:A:G	rs78896171	A	G	A	Hoxc9_MA0485.1	4	1	+	9.330250533599825	8.162486819608242	TCCTATAAATCTT
chr5	52690688	52690689	chr5:52690689:A:G	rs11739806	A	G	A	Hoxc9_MA0485.1	6	1	+	9.330250533599825	6.296044767090405	TCCTATAAATCTT
chr5	52695768	52695769	chr5:52695769:A:C	rs164611	A	C	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	52705920	52705921	chr5:52705921:A:G	rs72752532	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	52771699	52771700	chr5:52771700:T:G	rs17274300	T	G	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	52801348	52801349	chr5:52801349:A:G	rs2059202	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	53424725	53424726	chr5:53424726:T:C	rs1363971	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	53641918	53641919	chr5:53641919:G:A	rs72753656	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	54090940	54090941	chr5:54090941:G:T	chr5:54090941:G:T	G	T	G	Hoxc9_MA0485.1	10	1	-	8.90996022303787	6.225959889163922	AGCCATAAAACAT
chr5	54172445	54172446	chr5:54172446:A:G	rs7718177	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	54480706	54480707	chr5:54480707:G:T	rs75954315	G	T	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	54578180	54578181	chr5:54578181:T:C	rs72750096	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	54701196	54701197	chr5:54701197:A:C	rs115970922	A	C	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	54745546	54745547	chr5:54745547:C:T	rs56020939	C	T	C	Hoxc9_MA0485.1	11	1	+	9.036094968841313	10.231495438531372	AGCAGTAAATCCC
chr5	54787558	54787559	chr5:54787559:G:A	rs4865870	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	54829748	54829749	chr5:54829749:A:G	rs9968754	A	G	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	54851714	54851715	chr5:54851715:T:C	rs77782908	T	C	T	Hoxc9_MA0485.1	12	1	+	7.97094090813563	8.224937861900182	GGTTATGAATCAT
chr5	55302859	55302860	chr5:55302860:T:C	rs2606585	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	55535793	55535794	chr5:55535794:C:T	rs13182018	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	55634788	55634789	chr5:55634789:T:C	rs73119746	T	C	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	55956102	55956103	chr5:55956103:G:C	rs2228043	G	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	55993190	55993191	chr5:55993191:C:T	rs974846480	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	56038097	56038098	chr5:56038098:G:A	rs10045084	G	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	56278603	56278604	chr5:56278604:C:T	rs115922978	C	T	c	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	56290819	56290820	chr5:56290820:A:G	rs115110096	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	56314133	56314134	chr5:56314134:A:G	rs67896921	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	56566066	56566067	chr5:56566067:G:A	rs9687846	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	56614869	56614870	chr5:56614870:T:C	rs1574461	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	56615827	56615828	chr5:56615828:T:C	rs1050802044	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	56615831	56615832	chr5:56615832:C:G	rs10471987	C	G	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	56632475	56632476	chr5:56632476:A:G	rs56745245	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	56632515	56632516	chr5:56632516:C:T	rs72756020	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	56637974	56637975	chr5:56637975:T:C	rs1320494920	T	C	T	Hoxc9_MA0485.1	5	1	+	9.153469104809538	4.668157742171052	TGCTATCAATCAT
chr5	57042710	57042711	chr5:57042711:G:T	rs10461619	G	T	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	57229373	57229374	chr5:57229374:A:G	rs4444929	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	57366609	57366610	chr5:57366610:G:A	rs10054614	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	57435649	57435650	chr5:57435650:G:A	rs559898049	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	57658354	57658355	chr5:57658355:G:A	rs230828	G	A	g	Hoxc9_MA0485.1	1	1	+	7.235267611646212	5.6758240377361515	GGCCACAAATTAC
chr5	57711765	57711766	chr5:57711766:C:T	rs4700215	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	57736720	57736721	chr5:57736721:A:G	rs115762577	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr5	57803945	57803946	chr5:57803946:A:C	rs854046	A	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	57840232	57840233	chr5:57840233:G:A	rs755406075	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	57902210	57902211	chr5:57902211:C:A	rs73757488	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	58019847	58019848	chr5:58019848:T:G	chr5:58019848:T:G	T	G	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	58040666	58040667	chr5:58040667:G:A	rs1454925	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	58047750	58047751	chr5:58047751:A:G	rs1352615	A	G	A	Hoxc9_MA0485.1	9	1	+	8.585185971119849	5.524602725246243	GGCCATAAAACTT
chr5	58070933	58070934	chr5:58070934:G:A	rs12659235	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	58120671	58120672	chr5:58120672:G:A	rs7704854	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	58182490	58182491	chr5:58182491:A:G	rs2964185	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	58235539	58235540	chr5:58235540:A:G	rs73093475	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	58235580	58235581	chr5:58235581:G:A	rs73093479	G	A	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	58314871	58314872	chr5:58314872:A:G	chr5:58314872:A:G	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	58358387	58358388	chr5:58358388:A:T	rs27211	A	T	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	58456756	58456757	chr5:58456757:T:C	rs77452318	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	58456765	58456766	chr5:58456766:C:G	rs702724	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	58599266	58599267	chr5:58599267:A:G	rs12516344	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	58794039	58794040	chr5:58794040:C:T	rs35734784	C	T	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	58803619	58803620	chr5:58803620:G:T	rs2548249	G	T	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	58887726	58887727	chr5:58887727:G:C	rs79940467	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	58922877	58922878	chr5:58922878:C:T	chr5:58922878:C:T	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	58999186	58999187	chr5:58999187:A:G	rs7714708	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	59355368	59355369	chr5:59355369:T:C	rs62358047	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr5	59544095	59544096	chr5:59544096:C:T	rs73761533	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	59544099	59544100	chr5:59544100:C:A	rs73099614	C	A	C	Hoxc9_MA0485.1	2	1	+	9.657984496019754	7.738581523616002	GACCATAAATCCT
chr5	59544100	59544101	chr5:59544101:C:T	rs183708075	C	T	C	Hoxc9_MA0485.1	3	1	+	9.657984496019754	8.76973172299713	GACCATAAATCCT
chr5	59563560	59563561	chr5:59563561:T:C	chr5:59563561:T:C	T	C	T	Hoxc9_MA0485.1	6	1	-	6.636189064219816	3.601983297710396	GGCCATAAAGCAC
chr5	59856682	59856683	chr5:59856683:T:C	rs10514888	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	60028521	60028522	chr5:60028522:A:C	rs12054971	A	C	A	Hoxc9_MA0485.1	3	1	+	10.863891102635753	11.598642310206221	ACCAATAAATCAT
chr5	60354837	60354838	chr5:60354838:C:T	rs16877923	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	60382820	60382821	chr5:60382821:T:C	chr5:60382821:T:C	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	60487749	60487750	chr5:60487750:A:G	rs79563697	A	G	A	Hoxc9_MA0485.1	5	1	-	9.434844360418277	4.949532997779788	TGCCATGAATCAC
chr5	60634336	60634337	chr5:60634337:C:A	rs79524768	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	61287063	61287064	chr5:61287064:C:A	rs140959752	C	A	c	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	61667933	61667934	chr5:61667934:C:T	rs544296976	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	61779944	61779945	chr5:61779945:C:T	rs4133155	C	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	62002478	62002479	chr5:62002479:G:C	rs2166371	G	C	C	Hoxc9_MA0485.1	4	1	+	9.106388206660373	5.136225239402299	ACCAGTAAATCAA
chr5	62003614	62003615	chr5:62003615:C:T	rs968159	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	62184461	62184462	chr5:62184462:T:C	rs3909436	T	C	C	Hoxc9_MA0485.1	12	1	-	9.3907061288091	9.51638648564257	TGTCATAAATCTA
chr5	62249806	62249807	chr5:62249807:C:T	rs10074813	C	T	c	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	62249843	62249844	chr5:62249844:C:G	rs10074863	C	G	c	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	62316161	62316162	chr5:62316162:A:G	rs7718580	A	G	A	Hoxc9_MA0485.1	8	1	+	9.407462830558515	2.5055043204235545	AGGTATAAATCAC
chr5	62403203	62403204	chr5:62403204:G:A	rs77256376	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	62412301	62412302	chr5:62412302:T:G	rs78522246	T	G	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	62412318	62412319	chr5:62412319:C:G	rs115271691	C	G	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	62534841	62534842	chr5:62534842:T:C	rs57376490	T	C	T	Hoxc9_MA0485.1	10	1	+	9.26836086858994	11.072196772898693	AGACATAAATTAC
chr5	62707732	62707733	chr5:62707733:T:C	rs37763	T	C	T	Hoxc9_MA0485.1	3	1	+	9.360042740995501	10.248295514018123	TGTTATAAATCAA
chr5	62969526	62969527	chr5:62969527:A:G	rs13176735	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	63245752	63245753	chr5:63245753:G:A	rs62374595	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	63608829	63608830	chr5:63608830:T:A	rs62382605	T	A	T	Hoxc9_MA0485.1	7	1	-	9.172387239039615	3.9765360301230417	GACAATAAATTAT
chr5	63772302	63772303	chr5:63772303:G:A	rs429752	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	63952580	63952581	chr5:63952581:A:G	rs72767929	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	64459275	64459276	chr5:64459276:T:C	rs271724	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	64594114	64594115	chr5:64594115:C:T	rs76702682	C	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	64617291	64617292	chr5:64617292:C:T	rs2216706	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	64630595	64630596	chr5:64630596:C:T	rs12153793	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	64688558	64688559	chr5:64688559:T:A	rs6869987	T	A	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	64820222	64820223	chr5:64820223:A:G	rs57861201	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	64890222	64890223	chr5:64890223:T:C	rs56357397	T	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	65204121	65204122	chr5:65204122:A:G	rs62369565	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	65246602	65246603	chr5:65246603:G:A	rs7719056	G	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr5	65263136	65263137	chr5:65263137:C:T	rs141301531	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	65484949	65484950	chr5:65484950:G:C	rs245532	G	C	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	65562487	65562488	chr5:65562488:G:A	rs16893963	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	65790570	65790571	chr5:65790571:A:G	rs143808607	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	66368160	66368161	chr5:66368161:G:A	rs62359646	G	A	G	Hoxc9_MA0485.1	12	1	-	10.879830060570756	10.625833106806203	AGTAATAAATCAC
chr5	66440289	66440290	chr5:66440290:G:A	rs4602575	G	A	G	Hoxc9_MA0485.1	2	1	-	8.506288382663964	7.1292699055027375	AGCCACAAATCAC
chr5	66540284	66540285	chr5:66540285:G:A	rs4346738	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	66802730	66802731	chr5:66802731:C:T	rs33725	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr5	66875395	66875396	chr5:66875396:T:C	rs25838	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	66889322	66889323	chr5:66889323:T:C	rs39862	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	67031351	67031352	chr5:67031352:A:G	rs27204	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	67221647	67221648	chr5:67221648:A:G	rs6866416	A	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	67290251	67290252	chr5:67290252:C:T	rs143424818	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	67875534	67875535	chr5:67875535:C:T	rs716643	C	T	c	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	67897691	67897692	chr5:67897692:C:G	rs989235	C	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	67911029	67911030	chr5:67911030:A:G	rs6862134	A	G	A	Hoxc9_MA0485.1	5	1	-	9.608462039649	5.123150677010512	GCACATAAATCTC
chr5	68028049	68028050	chr5:68028050:A:T	rs467093	A	T	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	68187892	68187893	chr5:68187893:A:T	rs7734069	A	T	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	68187903	68187904	chr5:68187904:T:C	rs6449957	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	68187915	68187916	chr5:68187916:A:G	rs7734077	A	G	A	Hoxc9_MA0485.1	11	1	+	8.554522583306248	4.141989184437881	GGCTATAAAACAT
chr5	68260797	68260798	chr5:68260798:A:G	rs116339088	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	68479879	68479880	chr5:68479880:C:T	rs6884358	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	68544701	68544702	chr5:68544702:T:G	chr5:68544702:T:G	T	G	T	Hoxc9_MA0485.1	11	1	-	10.09137991441802	8.038390059518939	GGTTGTAAATCAC
chr5	68925081	68925082	chr5:68925082:A:G	rs11743274	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	71475865	71475866	chr5:71475866:A:G	rs10057258	A	G	a	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	71475903	71475904	chr5:71475904:T:G	rs760824610	T	G	t	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	72007480	72007481	chr5:72007481:G:A	rs1010376	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	72110842	72110843	chr5:72110843:T:C	rs12655953	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	72157020	72157021	chr5:72157021:T:A	rs62363205	T	A	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	72388057	72388058	chr5:72388058:G:A	rs9293289	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	72542098	72542099	chr5:72542099:C:G	rs16899497	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	72542100	72542101	chr5:72542101:T:C	rs62360613	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	72625073	72625074	chr5:72625074:G:A	rs142220339	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	72692253	72692254	chr5:72692254:G:C	rs111671976	G	C	G	Hoxc9_MA0485.1	10	1	-	9.949861729068344	5.148790921321068	AGCAATAAATCCT
chr5	72814745	72814746	chr5:72814746:T:C	rs11741577	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr5	72925877	72925878	chr5:72925878:G:A	rs198216	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	73181282	73181283	chr5:73181283:T:C	rs7714806	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	73181294	73181295	chr5:73181295:G:T	rs72766655	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	73189949	73189950	chr5:73189950:C:T	rs565021273	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	73197438	73197439	chr5:73197439:A:G	rs7702108	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	73282502	73282503	chr5:73282503:T:G	rs73762027	T	G	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	73283215	73283216	chr5:73283216:T:C	rs4235676	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	73388475	73388476	chr5:73388476:A:G	rs4346754	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	73388483	73388484	chr5:73388484:A:T	rs12653399	A	T	A	Hoxc9_MA0485.1	3	1	+	10.036093924822406	9.882592359370252	AGTAATAAATCAA
chr5	73668884	73668885	chr5:73668885:A:G	rs16870663	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	73745958	73745959	chr5:73745959:A:G	rs952995	A	G	G	Hoxc9_MA0485.1	0	1	+	9.595423248214203	10.128238381505206	AGCAATAAATTTC
chr5	73819175	73819176	chr5:73819176:C:T	rs7705309	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr5	73820796	73820797	chr5:73820797:C:T	rs75174543	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	73831323	73831324	chr5:73831324:G:A	rs75463560	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	73839168	73839169	chr5:73839169:A:G	rs2973575	A	G	A	Hoxc9_MA0485.1	4	1	+	7.856035446734812	6.688271732743227	GGACATCAATCTG
chr5	73860305	73860306	chr5:73860306:G:T	rs142819628	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	74122003	74122004	chr5:74122004:T:C	rs6453041	T	C	T	Hoxc9_MA0485.1	4	1	-	7.839756049846874	6.671992335855291	GCCCATAAAACAG
chr5	74122270	74122271	chr5:74122271:C:T	rs188272	C	T	C	Hoxc9_MA0485.1	12	1	+	7.836054932109804	7.5820579783452535	GGAAATGAATCAC
chr5	74165034	74165035	chr5:74165035:G:A	rs78719417	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	74213670	74213671	chr5:74213671:G:A	rs12519078	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	74410957	74410958	chr5:74410958:G:A	rs17558422	G	A	A	Hoxc9_MA0485.1	2	1	-	9.122142730613627	7.745124253452404	AACTGTAAATCAT
chr5	74412208	74412209	chr5:74412209:C:T	rs17558477	C	T	C	Hoxc9_MA0485.1	1	1	+	7.930143162088874	6.986343322844009	CCCTGTAAATCTT
chr5	74864629	74864630	chr5:74864630:A:G	rs16872364	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	74984470	74984471	chr5:74984471:G:A	rs11951363	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	75010141	75010142	chr5:75010142:A:G	rs62369164	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	75072293	75072294	chr5:75072294:C:A	rs78334671	C	A	C	Hoxc9_MA0485.1	10	1	+	9.34020786412772	6.656207530253771	AGATATAAATCAA
chr5	75072428	75072429	chr5:75072429:T:C	rs4704171	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	75202059	75202060	chr5:75202060:T:C	rs6864324	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	75405658	75405659	chr5:75405659:T:C	rs114200677	T	C	T	Hoxc9_MA0485.1	12	1	-	8.33460687992455	8.46028723675802	CCACATAAATCAA
chr5	75632243	75632244	chr5:75632244:C:G	rs253409	C	G	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	75677579	75677580	chr5:75677580:C:A	rs16872760	C	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	75994338	75994339	chr5:75994339:G:A	rs6453188	G	A	A	Hoxc9_MA0485.1	1	1	-	8.095145511450324	7.151345672205461	GCCTATAAATAAG
chr5	76332043	76332044	chr5:76332044:G:A	rs73764327	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	76405133	76405134	chr5:76405134:G:A	rs114379804	G	A	G	Hoxc9_MA0485.1	0	1	-	7.889975247909038	8.122318905428406	CGACATCAATCAT
chr5	76639262	76639263	chr5:76639263:G:A	rs2455232	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	76684541	76684542	chr5:76684542:A:T	rs7709577	A	T	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	76819998	76819999	chr5:76819999:C:T	rs35028859	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	76938353	76938354	chr5:76938354:A:C	rs1715757	A	C	A	Hoxc9_MA0485.1	12	1	-	8.90996022303787	8.445901397887544	AGCCATAAAACAT
chr5	77032031	77032032	chr5:77032032:A:G	rs971174599	A	G	A	Hoxc9_MA0485.1	5	1	-	9.060055198327001	4.574743835688516	ACCAATAAATTAT
chr5	77067450	77067451	chr5:77067451:A:G	rs72765119	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	77423367	77423368	chr5:77423368:T:C	rs34295093	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	77437430	77437431	chr5:77437431:G:A	rs116738892	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	77452547	77452548	chr5:77452548:C:G	rs335612	C	G	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	77636023	77636024	chr5:77636024:A:G	rs58253109	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	77774655	77774656	chr5:77774656:G:A	rs460302	G	A	G	Hoxc9_MA0485.1	3	1	-	8.055129341819361	7.166876568796737	AGACATCAATCAA
chr5	77774658	77774659	chr5:77774659:T:C	rs466754	T	C	T	Hoxc9_MA0485.1	0	1	-	8.055129341819361	8.587944475110364	AGACATCAATCAA
chr5	78399263	78399264	chr5:78399264:G:A	rs1594055	G	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	78638474	78638475	chr5:78638475:T:C	rs344655	T	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	78782005	78782006	chr5:78782006:A:G	rs7721866	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	79157159	79157160	chr5:79157160:A:C	rs7717669	A	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	79329765	79329766	chr5:79329766:A:T	rs13177425	A	T	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	79612900	79612901	chr5:79612901:C:T	rs182958454	C	T	C	Hoxc9_MA0485.1	12	1	-	9.005973328829123	8.880292971995653	GCCCATAAATTTG
chr5	79612907	79612908	chr5:79612908:A:G	rs767646307	A	G	A	Hoxc9_MA0485.1	5	1	-	9.005973328829123	4.52066196619064	GCCCATAAATTTG
chr5	79803174	79803175	chr5:79803175:C:T	rs259067	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	79837946	79837947	chr5:79837947:G:A	rs1560130	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	79884423	79884424	chr5:79884424:C:T	rs169083	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	79959589	79959590	chr5:79959590:C:T	rs7732543	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	80066726	80066727	chr5:80066727:G:A	rs443095	G	A	G	Hoxc9_MA0485.1	2	1	-	10.203858682832896	8.826840205671674	AGCAATAAATCCC
chr5	80076583	80076584	chr5:80076584:C:T	rs384941	C	T	-	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	80159968	80159969	chr5:80159969:A:G	rs73772266	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	80445198	80445199	chr5:80445199:T:A	rs259034	T	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	80466569	80466570	chr5:80466570:T:C	rs249024	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	80678750	80678751	chr5:80678751:G:A	rs836808	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	80924939	80924940	chr5:80924940:T:C	rs6871067	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	81117588	81117589	chr5:81117589:C:G	rs56157507	C	G	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	81172082	81172083	chr5:81172083:G:C	rs6881941	G	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	82165938	82165939	chr5:82165939:C:T	rs114802738	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	82279781	82279782	chr5:82279782:T:A	rs178931	T	A	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	82414228	82414229	chr5:82414229:G:T	rs224948	G	T	G	Hoxc9_MA0485.1	10	1	-	8.676768584409416	5.992768250535467	GACCATGAATCAT
chr5	82640976	82640977	chr5:82640977:G:A	rs11750715	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	83134712	83134713	chr5:83134713:G:A	rs12517930	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	83167883	83167884	chr5:83167884:C:T	rs67683443	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	83890032	83890033	chr5:83890033:A:T	rs73769670	A	T	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	84131231	84131232	chr5:84131232:C:T	rs164059	C	T	C	Hoxc9_MA0485.1	1	1	+	7.6225448079508	6.678744968705935	GCCTATCAATCTA
chr5	84297725	84297726	chr5:84297726:C:G	rs2607358	C	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	84688116	84688117	chr5:84688117:G:A	rs112934083	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	84794781	84794782	chr5:84794782:A:C	rs4555802	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	84817506	84817507	chr5:84817507:T:C	rs34690533	T	C	t	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	85139990	85139991	chr5:85139991:A:G	rs10074510	A	G	A	Hoxc9_MA0485.1	5	1	-	8.316809185915721	3.831497823277236	GGACATGAATCAT
chr5	85441438	85441439	chr5:85441439:C:T	rs62358956	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr5	85823662	85823663	chr5:85823663:G:A	rs12659004	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	86387366	86387367	chr5:86387367:G:A	rs13154019	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	86878446	86878447	chr5:86878447:G:A	rs10054518	G	A	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	87311815	87311816	chr5:87311816:G:A	rs10058449	G	A	G	Hoxc9_MA0485.1	4	1	+	8.358490027295687	9.52625374128727	TCCCGTAAATTAC
chr5	87340231	87340232	chr5:87340232:G:C	rs62368948	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	88485350	88485351	chr5:88485351:C:T	rs10044618	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	88654471	88654472	chr5:88654472:G:A	rs26582	G	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	88785767	88785768	chr5:88785768:G:T	rs201838416	G	T	G	Hoxc9_MA0485.1	12	1	-	9.785049793053748	8.941313657305399	TGCCATAAATAAC
chr5	89029489	89029490	chr5:89029490:T:C	rs1427965	T	C	C	Hoxc9_MA0485.1	10	1	-	8.388196439024743	6.2711259651514135	AGACATAAATAAC
chr5	89418731	89418732	chr5:89418732:A:T	rs10454907	A	T	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	89534753	89534754	chr5:89534754:A:G	rs7728214	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	89534757	89534758	chr5:89534758:G:T	rs58883791	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	90658031	90658032	chr5:90658032:C:T	rs17543819	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	90693961	90693962	chr5:90693962:G:A	rs16876822	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	90704136	90704137	chr5:90704137:T:C	rs10942605	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	90704150	90704151	chr5:90704151:A:G	rs10942606	A	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	90747429	90747430	chr5:90747430:C:T	rs2438367	C	T	C	Hoxc9_MA0485.1	1	1	-	9.870939830912084	8.311496257002021	CGTAATAAATCAT
chr5	90915830	90915831	chr5:90915831:C:G	rs10078568	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	90940231	90940232	chr5:90940232:A:G	rs12187790	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	91053445	91053446	chr5:91053446:A:G	rs12188249	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	91223678	91223679	chr5:91223679:G:A	rs2973472	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	91379360	91379361	chr5:91379361:T:G	rs375898154	T	G	-	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	91380143	91380144	chr5:91380144:C:G	chr5:91380144:C:G	C	G	C	Hoxc9_MA0485.1	10	1	+	8.451330960499911	3.650260152752634	GGCTGTCAATCAA
chr5	91816095	91816096	chr5:91816096:C:T	rs2973848	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	92190343	92190344	chr5:92190344:G:A	rs4916883	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	92190365	92190366	chr5:92190366:G:A	rs4916884	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	92795586	92795587	chr5:92795587:T:C	rs10866772	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr5	92795608	92795609	chr5:92795609:T:C	rs2112412	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	93079032	93079033	chr5:93079033:T:C	rs1400796091	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	93079067	93079068	chr5:93079068:G:A	rs1496335	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	93208378	93208379	chr5:93208379:A:C	rs75903342	A	C	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	93253873	93253874	chr5:93253874:A:T	rs78078662	A	T	T	Hoxc9_MA0485.1	7	1	+	10.862989589075674	5.667138380159101	GGCCATAAATTTC
chr5	93384007	93384008	chr5:93384008:G:A	rs2607279	G	A	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	94266411	94266412	chr5:94266412:A:C	rs6890849	A	C	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	94904005	94904006	chr5:94904006:C:T	rs176809	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	95664471	95664472	chr5:95664472:A:G	rs796241957	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	95818251	95818252	chr5:95818252:T:C	rs3777209	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	95843620	95843621	chr5:95843621:G:A	rs12651950	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	96626067	96626068	chr5:96626068:A:T	rs261237	A	T	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	96626068	96626069	chr5:96626069:C:T	rs3853204	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	96638640	96638641	chr5:96638641:C:T	rs155056	C	T	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	96909638	96909639	chr5:96909639:C:T	rs2549796	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	96936954	96936955	chr5:96936955:A:C	rs112483111	A	C	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	97070881	97070882	chr5:97070882:G:A	chr5:97070882:G:A	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	97071353	97071354	chr5:97071354:G:A	rs182950591	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	97544320	97544321	chr5:97544321:G:A	rs112142532	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	97563227	97563228	chr5:97563228:G:C	rs10076476	G	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	97565577	97565578	chr5:97565578:T:G	rs4869369	T	G	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	97628825	97628826	chr5:97628826:A:G	rs17087647	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	97970564	97970565	chr5:97970565:G:A	rs2352229	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr5	98219007	98219008	chr5:98219008:T:A	rs7727963	T	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	98454987	98454988	chr5:98454988:T:C	rs7717913	T	C	T	Hoxc9_MA0485.1	4	1	-	8.72386590384717	7.556102189855587	AGCTATAAATTTG
chr5	98468090	98468091	chr5:98468091:G:A	rs28842778	G	A	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	98556810	98556811	chr5:98556811:C:T	rs1550809	C	T	C	Hoxc9_MA0485.1	2	1	+	9.772596239943649	8.395577762782425	GGCAATCAATCAA
chr5	98605233	98605234	chr5:98605234:G:C	rs7701903	G	C	G	Hoxc9_MA0485.1	1	1	+	9.225859226354649	8.086898745022976	AGAAATAAATCTT
chr5	98752971	98752972	chr5:98752972:A:G	rs12515608	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	98769730	98769731	chr5:98769731:G:T	rs1828170	G	T	T	Hoxc9_MA0485.1	0	1	+	8.364632799725616	7.309268048059863	GGGTATAAATCTG
chr5	99033349	99033350	chr5:99033350:T:G	rs1875529	T	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	99128789	99128790	chr5:99128790:T:C	rs1900574	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	99900743	99900744	chr5:99900744:G:C	rs149381712	G	C	G	Hoxc9_MA0485.1	0	1	+	7.974230153591132	6.686521744406009	GCTCATGAATCAC
chr5	99919858	99919859	chr5:99919859:C:T	rs2927427	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	99945558	99945559	chr5:99945559:A:G	rs1381986	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	100292742	100292743	chr5:100292743:T:G	rs59577756	T	G	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	100644978	100644979	chr5:100644979:G:C	rs905828	G	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	100644995	100644996	chr5:100644996:A:G	rs10053862	A	G	A	Hoxc9_MA0485.1	8	1	+	8.302289491478568	1.400330981343607	ACTCATCAATCAC
chr5	100833294	100833295	chr5:100833295:G:A	rs1559059	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	100837688	100837689	chr5:100837689:G:T	rs58992676	G	T	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	101067540	101067541	chr5:101067541:C:G	rs34258305	C	G	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	101643649	101643650	chr5:101643650:T:A	rs9327633	T	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	101709514	101709515	chr5:101709515:C:G	rs1479061	C	G	G	Hoxc9_MA0485.1	1	1	-	8.323258021444701	7.184297540113028	TGCCATGAATCTT
chr5	101929965	101929966	chr5:101929966:T:C	rs11956721	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	102295225	102295226	chr5:102295226:T:A	rs841921	T	A	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	102599264	102599265	chr5:102599265:T:C	rs3114597	T	C	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	102666778	102666779	chr5:102666779:G:C	rs2657436	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	102668454	102668455	chr5:102668455:G:C	rs149105588	G	C	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	102752945	102752946	chr5:102752946:T:A	rs435394	T	A	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr5	103428346	103428347	chr5:103428347:C:A	rs2099077	C	A	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr5	103506259	103506260	chr5:103506260:C:T	rs143993354	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	103514566	103514567	chr5:103514567:G:A	chr5:103514567:G:A	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	103562174	103562175	chr5:103562175:A:T	rs531418680	A	T	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	103681897	103681898	chr5:103681898:T:C	rs1152175	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	103813417	103813418	chr5:103813418:C:T	rs28497446	C	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	103851628	103851629	chr5:103851629:A:T	rs62364196	A	T	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	103911132	103911133	chr5:103911133:A:G	rs2059886	A	G	A	Hoxc9_MA0485.1	8	1	+	8.849629584182052	1.9476710740470942	GCCTATAAATTAA
chr5	104062782	104062783	chr5:104062783:C:T	rs561483250	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	104289296	104289297	chr5:104289297:T:C	rs13170719	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	104333538	104333539	chr5:104333539:A:C	rs349590	A	C	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	104372700	104372701	chr5:104372701:A:G	rs1248793560	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	104501831	104501832	chr5:104501832:C:T	rs139656059	C	T	c	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	104942943	104942944	chr5:104942944:G:A	chr5:104942944:G:A	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	104942961	104942962	chr5:104942962:T:C	rs1438656	T	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	105158953	105158954	chr5:105158954:G:A	rs10066205	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	105266063	105266064	chr5:105266064:C:T	rs74949901	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	105392442	105392443	chr5:105392443:C:T	rs796344041	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	105525871	105525872	chr5:105525872:C:G	rs7722179	C	G	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	105918321	105918322	chr5:105918322:A:G	rs4254875	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	106497301	106497302	chr5:106497302:T:C	rs13173218	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	106966578	106966579	chr5:106966579:A:T	rs6880364	A	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	107337684	107337685	chr5:107337685:T:C	rs444702	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	107396442	107396443	chr5:107396443:T:C	rs431982	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	107434936	107434937	chr5:107434937:T:C	rs152609	T	C	t	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	107520128	107520129	chr5:107520129:C:A	rs250252	C	A	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	107673310	107673311	chr5:107673311:A:G	rs77813573	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	108351914	108351915	chr5:108351915:A:T	rs12521975	A	T	A	Hoxc9_MA0485.1	11	1	+	8.765472577575435	7.907883192366412	ACACGTAAATCAC
chr5	108472487	108472488	chr5:108472488:C:T	rs149538876	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	108661265	108661266	chr5:108661266:C:A	rs35080621	C	A	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	108798265	108798266	chr5:108798266:A:G	rs2229085	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr5	108924425	108924426	chr5:108924426:T:C	rs7723644	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	108942243	108942244	chr5:108942244:A:G	rs66485253	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	109006333	109006334	chr5:109006334:C:T	rs72790522	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	109255910	109255911	chr5:109255911:T:C	rs1862202	T	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	109255952	109255953	chr5:109255953:C:T	rs72793039	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	109407070	109407071	chr5:109407071:A:T	rs77075929	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	109417088	109417089	chr5:109417089:G:A	rs2963027	G	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	109697122	109697123	chr5:109697123:C:G	rs2300989	C	G	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	109759225	109759226	chr5:109759226:G:A	rs10035167	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	110087265	110087266	chr5:110087266:T:C	rs115796934	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	110087272	110087273	chr5:110087273:T:A	rs1056894305	T	A	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	110262828	110262829	chr5:110262829:C:G	rs6864455	C	G	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	110391886	110391887	chr5:110391887:G:A	chr5:110391887:G:A	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	110414743	110414744	chr5:110414744:A:G	rs138758428	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	110414777	110414778	chr5:110414778:G:C	rs311709	G	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	110414781	110414782	chr5:110414782:G:A	rs12513985	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	110858069	110858070	chr5:110858070:A:G	rs4377748	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	110900178	110900179	chr5:110900179:G:A	rs1862532	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	111143227	111143228	chr5:111143228:G:A	rs7704730	G	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	111513854	111513855	chr5:111513855:G:T	rs79343006	G	T	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	111522181	111522182	chr5:111522182:T:A	rs72792075	T	A	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	111584201	111584202	chr5:111584202:G:T	rs1551934	G	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	111732207	111732208	chr5:111732208:C:T	rs146347010	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	111813782	111813783	chr5:111813783:A:C	rs6894855	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	111847330	111847331	chr5:111847331:T:A	rs1044332996	T	A	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	112044239	112044240	chr5:112044240:G:A	rs113645921	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	112333014	112333015	chr5:112333015:T:C	rs12517378	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	112914500	112914501	chr5:112914501:C:T	rs193527	C	T	c	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	113064856	113064857	chr5:113064857:A:T	rs4235787	A	T	T	Hoxc9_MA0485.1	9	1	-	7.945966025824625	4.118323457324601	AGTCTTAAATCAC
chr5	113123982	113123983	chr5:113123983:G:A	rs78195653	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	113146951	113146952	chr5:113146952:G:A	rs7726679	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr5	113188088	113188089	chr5:113188089:G:A	rs1271471029	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	113237142	113237143	chr5:113237143:C:T	rs13355627	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	113257649	113257650	chr5:113257650:C:T	rs10519347	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	113367849	113367850	chr5:113367850:A:T	rs10076511	A	T	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	113463671	113463672	chr5:113463672:C:A	rs463167	C	A	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	113781130	113781131	chr5:113781131:A:G	rs10045721	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	113795000	113795001	chr5:113795001:T:C	rs17135985	T	C	T	Hoxc9_MA0485.1	8	1	-	9.163957176802423	2.261998666667463	AGCCATAAAACAC
chr5	114148401	114148402	chr5:114148402:G:A	rs4705487	G	A	G	Hoxc9_MA0485.1	1	1	+	8.935519774439868	7.376076200529806	TGTAGTAAATCAT
chr5	114243510	114243511	chr5:114243511:G:T	rs185460260	G	T	G	Hoxc9_MA0485.1	0	1	+	8.85672993172426	7.801365180058505	GCCCATTAATCAC
chr5	114331394	114331395	chr5:114331395:A:C	rs28321	A	C	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	114412873	114412874	chr5:114412874:C:T	rs337711	C	T	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	114523900	114523901	chr5:114523901:T:G	rs11241283	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	115262259	115262260	chr5:115262260:G:C	rs75506393	G	C	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	115382179	115382180	chr5:115382180:A:G	rs527834659	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	115559877	115559878	chr5:115559878:G:C	rs139734470	G	C	G	Hoxc9_MA0485.1	1	1	+	8.35822741395531	7.219266932623638	TGCCATAAATTCT
chr5	115560897	115560898	chr5:115560898:G:A	rs256971	G	A	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	116075610	116075611	chr5:116075611:A:C	rs12719212	A	C	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	116097638	116097639	chr5:116097639:G:A	rs58406663	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	116153800	116153801	chr5:116153801:G:A	rs1508870	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr5	116158038	116158039	chr5:116158039:C:T	rs13181756	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr5	116158039	116158040	chr5:116158040:T:C	rs79684814	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	116238332	116238333	chr5:116238333:G:A	rs115868457	G	A	G	Hoxc9_MA0485.1	3	1	-	8.069917844668705	7.181665071646081	ACCCATTAATCAT
chr5	116386793	116386794	chr5:116386794:G:A	rs7703121	G	A	A	Hoxc9_MA0485.1	12	1	-	8.675935465621798	8.421938511857245	TCAAATAAATCAC
chr5	116737682	116737683	chr5:116737683:C:T	rs150600334	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	116842731	116842732	chr5:116842732:G:A	rs12517201	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	117183330	117183331	chr5:117183331:C:G	rs4920964	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	117407316	117407317	chr5:117407317:G:A	rs2624455	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	117521893	117521894	chr5:117521894:A:G	rs390708	A	G	A	Hoxc9_MA0485.1	12	1	+	8.894012917068181	9.019693273901652	TCCAATAAATCTA
chr5	117742063	117742064	chr5:117742064:A:G	rs74555851	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr5	117856343	117856344	chr5:117856344:G:A	rs140738442	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	118034715	118034716	chr5:118034716:C:T	rs12517363	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	118239813	118239814	chr5:118239814:G:C	rs72784875	G	C	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	118549080	118549081	chr5:118549081:C:G	rs76538009	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	118554962	118554963	chr5:118554963:C:T	rs77520493	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	118559913	118559914	chr5:118559914:C:T	rs7719858	C	T	T	Hoxc9_MA0485.1	10	1	+	8.979793575444445	7.175957671135694	GGTTGTAAATCTT
chr5	118580870	118580871	chr5:118580871:G:A	rs7737909	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	118615165	118615166	chr5:118615166:G:A	rs78953845	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	118615189	118615190	chr5:118615190:A:G	rs6881807	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	118615192	118615193	chr5:118615193:G:A	rs184824963	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	118728398	118728399	chr5:118728399:G:A	rs769589434	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	118789541	118789542	chr5:118789542:T:C	rs6595162	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	118790725	118790726	chr5:118790726:C:A	rs589297	C	A	A	Hoxc9_MA0485.1	10	1	+	8.995612234742675	6.311611900868724	GATAATAAATCTC
chr5	119031975	119031976	chr5:119031976:T:C	rs373172892	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	121189024	121189025	chr5:121189025:G:A	rs1896656	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	121280114	121280115	chr5:121280115:C:A	rs11744147	C	A	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	121280135	121280136	chr5:121280136:C:T	rs6595292	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	121285573	121285574	chr5:121285574:T:C	rs2052555	T	C	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	121391935	121391936	chr5:121391936:A:G	rs13184792	A	G	A	Hoxc9_MA0485.1	5	1	-	12.737602791537896	8.252291428899412	AGCCATAAATCAT
chr5	121503700	121503701	chr5:121503701:G:A	rs761823044	G	A	g	Hoxc9_MA0485.1	15	0	-	0	0	.
chr5	121694913	121694914	chr5:121694914:A:G	rs7727347	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	121703069	121703070	chr5:121703070:A:G	rs1431953	A	G	a	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	121762696	121762697	chr5:121762697:T:C	rs56012350	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	121819825	121819826	chr5:121819826:G:T	rs7736854	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	121923752	121923753	chr5:121923753:T:G	rs139441683	T	G	T	Hoxc9_MA0485.1	7	1	-	9.585818624848342	2.6815895556427654	AACAATAAATCTT
chr5	122036249	122036250	chr5:122036250:G:A	rs79063554	G	A	G	Hoxc9_MA0485.1	2	1	-	10.677262895498266	9.300244418337044	CACCATAAATCAC
chr5	122126738	122126739	chr5:122126739:A:G	rs186277856	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	122154859	122154860	chr5:122154860:G:A	rs78982302	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	122493803	122493804	chr5:122493804:C:T	rs6866316	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr5	122499792	122499793	chr5:122499793:T:C	rs59474966	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	123001728	123001729	chr5:123001729:T:C	rs381007	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	123095666	123095667	chr5:123095667:G:C	rs335179	G	C	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	123124753	123124754	chr5:123124754:G:A	rs451606	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	123283704	123283705	chr5:123283705:G:T	rs151279543	G	T	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	123359071	123359072	chr5:123359072:G:C	rs4836003	G	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	123672424	123672425	chr5:123672425:T:G	rs12651946	T	G	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	123672439	123672440	chr5:123672440:G:T	rs75607522	G	T	G	Hoxc9_MA0485.1	3	1	-	9.187978947070611	8.453227739500143	GAACATAAATCTC
chr5	123883267	123883268	chr5:123883268:C:T	rs1221979217	C	T	C	Hoxc9_MA0485.1	11	1	+	8.000612602764868	9.196013072454924	AGCCATAAATACT
chr5	123951829	123951830	chr5:123951830:T:C	rs189503449	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	124025527	124025528	chr5:124025528:A:G	rs2042251	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	124126560	124126561	chr5:124126561:T:C	rs6873606	T	C	C	Hoxc9_MA0485.1	5	1	+	7.727070003931925	3.2417586412934396	GGACATGAATCAA
chr5	124131020	124131021	chr5:124131021:G:A	rs4836066	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	124180069	124180070	chr5:124180070:T:G	rs12186497	T	G	G	Hoxc9_MA0485.1	11	1	-	10.132292852586605	8.079302997687526	TTCCATAAATCAT
chr5	124207076	124207077	chr5:124207077:T:C	rs4836070	T	C	T	Hoxc9_MA0485.1	8	1	-	7.593741575290891	0.6917830651559302	GGCTGTCAATCTA
chr5	124210028	124210029	chr5:124210029:A:G	rs922554	A	G	A	Hoxc9_MA0485.1	8	1	+	7.667979319180417	0.7660208090454599	TGCCATAAATGAC
chr5	124213224	124213225	chr5:124213225:G:A	rs6882943	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	124213273	124213274	chr5:124213274:G:A	rs6882976	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	124264020	124264021	chr5:124264021:A:C	rs7711913	A	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	124316256	124316257	chr5:124316257:A:T	rs17151579	A	T	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	124341684	124341685	chr5:124341685:A:G	rs188084286	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	124606317	124606318	chr5:124606318:A:G	rs12110019	A	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	124628731	124628732	chr5:124628732:C:G	rs76265988	C	G	c	Hoxc9_MA0485.1	4	1	-	9.127951889589555	5.15778892233148	AGGCGTAAATCAC
chr5	124668982	124668983	chr5:124668983:A:G	rs13162118	A	G	A	Hoxc9_MA0485.1	5	1	-	10.893404962803794	6.408093600165311	TGCCATAAATCTG
chr5	124735302	124735303	chr5:124735303:A:G	rs183193444	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	124825364	124825365	chr5:124825365:T:C	rs6893891	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	124851271	124851272	chr5:124851272:T:G	rs17152110	T	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	124973870	124973871	chr5:124973871:G:A	rs1423568489	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	125058335	125058336	chr5:125058336:G:A	rs72787443	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr5	125326074	125326075	chr5:125326075:C:T	rs28719941	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	125326094	125326095	chr5:125326095:A:G	rs17463483	A	G	A	Hoxc9_MA0485.1	5	1	-	8.392718197786815	3.9074068351483295	GACTATAAATAAC
chr5	126057274	126057275	chr5:126057275:G:A	rs4565208	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	126221607	126221608	chr5:126221608:T:C	rs138497523	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	126229862	126229863	chr5:126229863:G:A	rs1813093	G	A	G	Hoxc9_MA0485.1	1	1	+	9.222605208872702	7.663161634962641	CGCAGTAAATCTT
chr5	126351265	126351266	chr5:126351266:T:C	rs116378577	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	126357660	126357661	chr5:126357661:C:T	rs10519906	C	T	C	Hoxc9_MA0485.1	12	1	-	8.06936891090554	7.943688554072071	GGCCATAAATACG
chr5	126357689	126357690	chr5:126357690:G:A	rs10519907	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	126453515	126453516	chr5:126453516:A:G	rs11241893	A	G	G	Hoxc9_MA0485.1	11	1	+	8.784398057705292	4.371864658836923	GGCTGTAAATAAC
chr5	126477983	126477984	chr5:126477984:A:G	rs6595712	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	126512663	126512664	chr5:126512664:C:G	rs77885874	C	G	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	126837963	126837964	chr5:126837964:T:C	rs57778143	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	126837967	126837968	chr5:126837968:G:A	rs2973593	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	126983647	126983648	chr5:126983648:T:C	rs116771298	T	C	T	Hoxc9_MA0485.1	1	1	-	9.046247464572492	10.605691038482552	CATCATAAATCAT
chr5	127060879	127060880	chr5:127060880:A:T	rs12655699	A	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	127073293	127073294	chr5:127073294:A:G	rs73783529	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr5	127073295	127073296	chr5:127073296:T:C	rs1038117537	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	127182993	127182994	chr5:127182994:C:T	rs248105	C	T	C	Hoxc9_MA0485.1	10	1	+	10.622712580383652	8.8188766760749	TGCAATAAATCTT
chr5	127193282	127193283	chr5:127193283:T:C	rs248131	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	127203889	127203890	chr5:127203890:C:A	rs74447080	C	A	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	127312375	127312376	chr5:127312376:G:A	rs189339682	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	127518422	127518423	chr5:127518423:G:A	rs74744154	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	127518434	127518435	chr5:127518435:T:A	rs10044579	T	A	T	Hoxc9_MA0485.1	7	1	-	8.52533939259844	3.329488183681869	GGCTATAAATTCT
chr5	127614070	127614071	chr5:127614071:T:C	rs13190411	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	127813882	127813883	chr5:127813883:T:C	rs79452965	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	128237917	128237918	chr5:128237918:G:T	rs1478448	G	T	G	Hoxc9_MA0485.1	3	1	-	7.862319722716925	7.127568515146456	AGTCATGAATCAG
chr5	128413604	128413605	chr5:128413605:C:T	rs331068	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr5	128579173	128579174	chr5:128579174:T:A	rs6898190	T	A	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	128846350	128846351	chr5:128846351:C:T	rs62391242	C	T	c	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	129098459	129098460	chr5:129098460:G:A	rs3798110	G	A	G	Hoxc9_MA0485.1	3	1	-	7.328893585633276	6.440640812610653	TGACGTAAATCCC
chr5	129177649	129177650	chr5:129177650:A:G	rs6859028	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	129361435	129361436	chr5:129361436:T:C	rs10054817	T	C	T	Hoxc9_MA0485.1	5	1	+	8.76043559189816	4.275124229259675	AGCCATCAATTAT
chr5	129575408	129575409	chr5:129575409:C:A	rs4836462	C	A	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	129719240	129719241	chr5:129719241:G:A	rs138035818	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	129739821	129739822	chr5:129739822:C:T	rs79834228	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	129971903	129971904	chr5:129971904:T:G	chr5:129971904:T:G	T	G	T	Hoxc9_MA0485.1	5	1	+	8.806973102061468	1.9084301263418741	GGCTGTAAATTTC
chr5	130333295	130333296	chr5:130333296:G:A	rs1157409	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	130826990	130826991	chr5:130826991:C:T	rs12517680	C	T	C	Hoxc9_MA0485.1	2	1	+	8.079302997687526	6.702284520526303	TTCCATAAATCCT
chr5	131081442	131081443	chr5:131081443:G:A	rs1549210	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	131177393	131177394	chr5:131177394:G:C	rs6860285	G	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	131526180	131526181	chr5:131526181:T:C	rs2189383	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr5	131589611	131589612	chr5:131589612:C:G	rs73788710	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	131833243	131833244	chr5:131833244:C:T	rs2404776	C	T	C	Hoxc9_MA0485.1	10	1	+	9.528700421142135	7.7248645168333825	TTCCATAAATCTC
chr5	131983757	131983758	chr5:131983758:C:T	rs58949331	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	131983766	131983767	chr5:131983767:A:G	rs173812	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	132024283	132024284	chr5:132024284:T:C	rs116215497	T	C	C	Hoxc9_MA0485.1	0	1	+	8.268505577242417	8.036161919723048	TCCTATCAATCAC
chr5	132052525	132052526	chr5:132052526:G:A	rs246752	G	A	G	Hoxc9_MA0485.1	4	1	+	9.546336678485925	10.714100392477508	AACCGTAAATCAG
chr5	132259553	132259554	chr5:132259554:G:A	rs146725345	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	132577732	132577733	chr5:132577733:T:C	rs78484432	T	C	T	Hoxc9_MA0485.1	7	1	-	8.974001990400039	2.069772921194463	TGACATAAATCTG
chr5	132659969	132659970	chr5:132659970:G:A	rs111692618	G	A	G	Hoxc9_MA0485.1	12	1	-	7.221083303682735	6.967086349918184	TCCTGTAAATCCC
chr5	132660976	132660977	chr5:132660977:T:C	rs847	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	132819673	132819674	chr5:132819674:T:G	rs58324857	T	G	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	132860690	132860691	chr5:132860691:A:C	rs10491280	A	C	C	Hoxc9_MA0485.1	4	1	+	9.025002974161229	3.887076292911572	AGTTATAAATCTA
chr5	132972260	132972261	chr5:132972261:C:T	rs12234077	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	133025574	133025575	chr5:133025575:A:G	rs7707473	A	G	G	Hoxc9_MA0485.1	4	1	+	8.21155182056138	7.043788106569797	AGCTATGAATCTC
chr5	133026182	133026183	chr5:133026183:C:T	rs142060819	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr5	133026201	133026202	chr5:133026202:G:A	rs3885730	G	A	G	Hoxc9_MA0485.1	1	1	+	10.82853073687214	9.26908716296208	GGGCATAAATCAC
chr5	133345887	133345888	chr5:133345888:G:A	rs7714483	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	133667443	133667444	chr5:133667444:T:C	rs11242168	T	C	C	Hoxc9_MA0485.1	9	1	+	8.106046831249857	1.217821016876225	TGCTGTAAATCCT
chr5	133715387	133715388	chr5:133715388:T:C	rs10052064	T	C	C	Hoxc9_MA0485.1	11	1	-	7.618647954983037	3.2061145561146684	TGCCATAACTCAC
chr5	133824885	133824886	chr5:133824886:C:T	rs76770997	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	133824930	133824931	chr5:133824931:C:T	rs3851487	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	133848947	133848948	chr5:133848948:C:T	rs4958259	C	T	T	Hoxc9_MA0485.1	3	1	+	8.19052893755517	7.302276164532544	AGCCATAAATGAC
chr5	133851066	133851067	chr5:133851067:A:G	rs35445236	A	G	A	Hoxc9_MA0485.1	4	1	+	8.414667402313695	7.246903688322113	TCCCATAAATTTT
chr5	133918157	133918158	chr5:133918158:A:G	rs17683751	A	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	133974337	133974338	chr5:133974338:G:A	rs11952145	G	A	G	Hoxc9_MA0485.1	2	1	-	8.25954839670201	6.882529919540788	TGCAGTAAATCCT
chr5	134202437	134202438	chr5:134202438:G:T	rs78348584	G	T	G	Hoxc9_MA0485.1	2	1	-	9.344400604206458	7.424997631802703	GACAGTAAATCAG
chr5	134255625	134255626	chr5:134255626:A:C	rs148125279	A	C	A	Hoxc9_MA0485.1	8	1	+	9.601956339061406	4.751554167116745	GGCTATGAATCAC
chr5	134418914	134418915	chr5:134418915:C:G	rs28548942	C	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr5	134445895	134445896	chr5:134445896:G:A	rs10491288	G	A	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	134445926	134445927	chr5:134445927:A:G	rs328834	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	134462590	134462591	chr5:134462591:A:G	rs7701457	A	G	G	Hoxc9_MA0485.1	0	1	+	11.413112401983629	11.945927535274631	AGCAATAAATCAA
chr5	135280884	135280885	chr5:135280885:G:C	rs3853685	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	135393831	135393832	chr5:135393832:T:C	rs779562	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr5	135863270	135863271	chr5:135863271:A:T	chr5:135863271:A:T	A	T	A	Hoxc9_MA0485.1	4	1	+	8.395577762782425	4.726962520465828	GGTAATCAATCAA
chr5	135999889	135999890	chr5:135999890:A:G	rs6882087	A	G	A	Hoxc9_MA0485.1	8	1	+	9.225859226354649	2.3239007162196903	AGAAATAAATCTT
chr5	136050010	136050011	chr5:136050011:T:C	rs1060433	T	C	C	Hoxc9_MA0485.1	8	1	-	8.855849569826828	1.9538910596918693	ATCCATAAATCCC
chr5	136205309	136205310	chr5:136205310:T:C	rs6892863	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	136525615	136525616	chr5:136525616:G:A	rs77751064	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	136613540	136613541	chr5:136613541:A:G	rs547233781	A	G	A	Hoxc9_MA0485.1	4	1	+	8.439259780342132	7.271496066350548	GAATATAAATCAG
chr5	137155739	137155740	chr5:137155740:T:A	rs4976340	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	137415156	137415157	chr5:137415157:G:T	rs11242380	G	T	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	137640002	137640003	chr5:137640003:C:T	rs11743510	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	137699584	137699585	chr5:137699585:T:C	rs116316565	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	138034361	138034362	chr5:138034362:T:A	rs1381726	T	A	t	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	138077096	138077097	chr5:138077097:G:A	rs11242415	G	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	138260224	138260225	chr5:138260225:G:T	rs114801866	G	T	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr5	138275551	138275552	chr5:138275552:T:C	rs142567664	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	138651302	138651303	chr5:138651303:A:G	rs74534317	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	138927870	138927871	chr5:138927871:C:T	rs59864201	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	139076703	139076704	chr5:139076704:C:T	rs10069980	C	T	C	Hoxc9_MA0485.1	0	1	-	9.256681037138172	8.72386590384717	GGCTATAAATTTG
chr5	139610279	139610280	chr5:139610280:C:T	rs184737225	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	139616186	139616187	chr5:139616187:C:T	rs1434982222	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	139752883	139752884	chr5:139752884:G:A	rs112419009	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	140151432	140151433	chr5:140151433:C:T	rs183869	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	140165967	140165968	chr5:140165968:T:G	rs269780	T	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	141778279	141778280	chr5:141778280:G:A	rs77849398	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	141897770	141897771	chr5:141897771:G:T	rs73274326	G	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr5	141914021	141914022	chr5:141914022:A:G	rs17097850	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	141974374	141974375	chr5:141974375:T:G	rs77871833	T	G	T	Hoxc9_MA0485.1	7	1	-	8.100377718546476	1.196148649340897	ACCCATGAATCAG
chr5	142016356	142016357	chr5:142016357:G:A	rs61586772	G	A	G	Hoxc9_MA0485.1	4	1	+	7.278137683895962	8.445901397887544	AGCCGTAAAACAG
chr5	142037369	142037370	chr5:142037370:T:C	rs2438594	T	C	T	Hoxc9_MA0485.1	4	1	-	9.441815446020714	8.27405173202913	GTCTATAAATCTT
chr5	142280230	142280231	chr5:142280231:A:G	rs4537084	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr5	142280232	142280233	chr5:142280233:C:T	rs111695194	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	142452250	142452251	chr5:142452251:T:G	rs10079370	T	G	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	142545575	142545576	chr5:142545576:A:G	rs10059649	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	142545581	142545582	chr5:142545582:G:A	rs114702855	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	142607115	142607116	chr5:142607116:T:G	rs13159871	T	G	T	Hoxc9_MA0485.1	9	1	-	8.065756879167647	5.005173633294041	GGTCATAAAACAT
chr5	142925822	142925823	chr5:142925823:G:T	rs3776403	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	142925849	142925850	chr5:142925850:A:C	rs573264665	A	C	A	Hoxc9_MA0485.1	5	1	-	9.96513219268719	3.066589216967597	GACTATAAATCTT
chr5	142925865	142925866	chr5:142925866:G:A	rs698287	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	142981953	142981954	chr5:142981954:C:G	rs74534318	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	143061407	143061408	chr5:143061408:G:A	rs76889300	G	A	g	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	143108862	143108863	chr5:143108863:C:T	rs13185496	C	T	C	Hoxc9_MA0485.1	4	1	-	8.158590900675463	9.326354614667046	AGATGTAAATCTC
chr5	143148054	143148055	chr5:143148055:A:T	rs59774766	A	T	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	143153429	143153430	chr5:143153430:A:G	rs258801	A	G	A	Hoxc9_MA0485.1	4	1	+	10.083448611563671	8.915684897572088	AGAAATAAATCAT
chr5	143176166	143176167	chr5:143176167:A:G	rs6894946	A	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	143353501	143353502	chr5:143353502:C:T	rs75689709	C	T	T	Hoxc9_MA0485.1	12	1	-	8.633192851837478	8.507512495004008	GCCCATGAATCAG
chr5	143634547	143634548	chr5:143634548:C:T	rs13181932	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	143829099	143829100	chr5:143829100:G:C	rs11167833	G	C	G	Hoxc9_MA0485.1	12	1	+	10.886956127274816	11.605011906189695	GGACATAAATCAG
chr5	143913753	143913754	chr5:143913754:C:G	rs17101210	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	144002980	144002981	chr5:144002981:G:T	rs312593	G	T	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	144027544	144027545	chr5:144027545:T:C	rs411200	T	C	C	Hoxc9_MA0485.1	4	1	-	8.8188766760749	7.651112962083318	TGCAATAAATTTT
chr5	144085173	144085174	chr5:144085174:C:A	rs80217894	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	144177434	144177435	chr5:144177435:A:G	rs1113686	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	144297373	144297374	chr5:144297374:A:G	rs10074646	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	144321295	144321296	chr5:144321296:C:T	rs17101780	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	144329339	144329340	chr5:144329340:A:G	rs29894	A	G	G	Hoxc9_MA0485.1	2	1	-	9.84040959276859	11.217428069929815	GGTCATAAATCCT
chr5	144406265	144406266	chr5:144406266:A:G	rs74615001	A	G	A	Hoxc9_MA0485.1	12	1	-	9.25875624522408	9.512753198988632	AAACATAAATCAT
chr5	144665979	144665980	chr5:144665980:G:C	rs3910187	G	C	C	Hoxc9_MA0485.1	3	1	-	8.794697420073753	3.2783009480880616	AAACATAAATCAG
chr5	144723811	144723812	chr5:144723812:A:G	rs2041070	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	144775125	144775126	chr5:144775126:G:A	rs247565	G	A	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	145027521	145027522	chr5:145027522:A:G	rs31913	A	G	A	Hoxc9_MA0485.1	8	1	+	8.794697420073753	1.8927389099387941	AAACATAAATCAG
chr5	145484072	145484073	chr5:145484073:C:T	rs35872813	C	T	T	Hoxc9_MA0485.1	12	1	+	8.388196439024743	8.13419948526019	AGACATAAATAAC
chr5	145536435	145536436	chr5:145536436:T:C	rs4443474	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	145619631	145619632	chr5:145619632:G:A	rs116608983	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	145856105	145856106	chr5:145856106:G:A	rs3995495	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	145938884	145938885	chr5:145938885:G:A	rs974869010	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	146409542	146409543	chr5:146409543:G:T	rs4705295	G	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	146544560	146544561	chr5:146544561:G:A	rs4260721	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	146715164	146715165	chr5:146715165:A:G	rs3906862	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	146798418	146798419	chr5:146798419:A:G	rs77296726	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	147188587	147188588	chr5:147188588:T:C	rs2042873	T	C	T	Hoxc9_MA0485.1	4	1	-	9.22089994510734	8.053136231115754	GTTCATAAATCAA
chr5	147296146	147296147	chr5:147296147:T:C	rs4705158	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	147307480	147307481	chr5:147307481:T:C	rs7706182	T	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr5	147504137	147504138	chr5:147504138:A:G	rs190820451	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	147504140	147504141	chr5:147504141:G:A	rs11952675	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr5	147508595	147508596	chr5:147508596:T:A	rs562542737	T	A	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	147800555	147800556	chr5:147800556:C:A	rs1560677	C	A	C	Hoxc9_MA0485.1	0	1	-	9.744216691773817	8.688851940108062	GATCATAAATCAA
chr5	147805156	147805157	chr5:147805157:C:T	rs73274040	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr5	147805173	147805174	chr5:147805174:G:A	rs992737877	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	148236825	148236826	chr5:148236826:T:G	rs2895730	T	G	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	148816920	148816921	chr5:148816921:T:C	rs55922930	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	148836838	148836839	chr5:148836839:G:A	rs6888329	G	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	148965500	148965501	chr5:148965501:C:T	rs34916792	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	149001754	149001755	chr5:149001755:G:A	rs3763020	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr5	149279584	149279585	chr5:149279585:G:T	rs11954165	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	149320946	149320947	chr5:149320947:G:A	rs79428273	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	149651776	149651777	chr5:149651777:A:G	rs35121730	A	G	a	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	149757394	149757395	chr5:149757395:A:G	rs4705369	A	G	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	150073886	150073887	chr5:150073887:T:C	rs1549919	T	C	C	Hoxc9_MA0485.1	10	1	+	9.625504718208594	11.429340622517346	GGTCATAAATTAG
chr5	150299124	150299125	chr5:150299125:G:C	rs192158729	G	C	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	150540952	150540953	chr5:150540953:G:A	rs932850723	G	A	G	Hoxc9_MA0485.1	2	1	-	7.1037684953659594	5.726750018204735	TCCCATCAATCCC
chr5	150758505	150758506	chr5:150758506:T:A	rs17111322	T	A	T	Hoxc9_MA0485.1	9	1	+	9.194968453174225	5.3673258846742025	CGCAATAAATCCT
chr5	151120171	151120172	chr5:151120172:C:T	rs4958897	C	T	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	151120206	151120207	chr5:151120207:G:A	rs79865212	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	151120322	151120323	chr5:151120323:C:T	rs728052	C	T	C	Hoxc9_MA0485.1	0	1	-	7.815516276200582	7.28270114290958	GTCAATCAATCAG
chr5	151284581	151284582	chr5:151284582:G:A	rs367817277	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	151284621	151284622	chr5:151284622:G:C	rs17111902	G	C	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	151314014	151314015	chr5:151314015:C:G	rs383777	C	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	151336196	151336197	chr5:151336197:T:C	rs6579853	T	C	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	151433850	151433851	chr5:151433851:A:G	rs78219536	A	G	A	Hoxc9_MA0485.1	12	1	+	10.026524562870877	10.152204919704348	GGAAATAAATCAA
chr5	151729934	151729935	chr5:151729935:C:T	rs146552617	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr5	151805871	151805872	chr5:151805872:T:C	rs12522670	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	151805900	151805901	chr5:151805901:A:T	rs10036616	A	T	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	152087406	152087407	chr5:152087407:T:C	rs29854	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	152143302	152143303	chr5:152143303:T:C	rs153530	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	152143316	152143317	chr5:152143317:T:C	rs11167571	T	C	T	Hoxc9_MA0485.1	5	1	+	8.781635278072102	4.296323915433617	TGTAATAAATCTG
chr5	152170554	152170555	chr5:152170555:G:A	rs294954	G	A	g	Hoxc9_MA0485.1	1	1	+	7.824173070539957	6.264729496629896	CGCCATAAATCGC
chr5	152202543	152202544	chr5:152202544:A:G	rs17663037	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	152386317	152386318	chr5:152386318:C:T	rs1156933	C	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	152651548	152651549	chr5:152651549:C:T	rs4958572	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	152676536	152676537	chr5:152676537:C:T	rs11750746	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	153207997	153207998	chr5:153207998:C:T	rs9968680	C	T	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	153211565	153211566	chr5:153211566:A:G	rs17581550	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	153592987	153592988	chr5:153592988:A:T	rs55946739	A	T	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	153641392	153641393	chr5:153641393:C:T	rs116476871	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	153823321	153823322	chr5:153823322:G:A	rs2964011	G	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	154049626	154049627	chr5:154049627:T:A	rs689715	T	A	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	154583713	154583714	chr5:154583714:A:G	rs73289074	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	154611661	154611662	chr5:154611662:A:G	rs1975985	A	G	A	Hoxc9_MA0485.1	8	1	+	8.806973102061468	1.9050145919265093	GGCTGTAAATTTC
chr5	154820702	154820703	chr5:154820703:G:A	rs11167702	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	154944968	154944969	chr5:154944969:C:G	rs348752	C	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	154970982	154970983	chr5:154970983:A:G	rs55747013	A	G	A	Hoxc9_MA0485.1	4	1	+	9.222642771222558	8.054879057230975	AGCAATGAATCAC
chr5	155053831	155053832	chr5:155053832:T:C	rs445362	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	155053836	155053837	chr5:155053837:C:T	rs395874	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	155139323	155139324	chr5:155139324:G:A	rs17116996	G	A	g	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	155549545	155549546	chr5:155549546:G:T	rs4312936	G	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	155689484	155689485	chr5:155689485:C:T	rs189844197	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	156344568	156344569	chr5:156344569:T:C	rs1801193	T	C	C	Hoxc9_MA0485.1	4	1	-	10.938609890403367	9.770846176411784	AGCCATAAATCCC
chr5	156437857	156437858	chr5:156437858:T:C	rs6880816	T	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	156475269	156475270	chr5:156475270:G:T	rs73295175	G	T	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	156590588	156590589	chr5:156590589:T:C	rs72801157	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr5	156686928	156686929	chr5:156686929:G:C	rs116644152	G	C	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	156726387	156726388	chr5:156726388:G:A	rs282466	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	157049758	157049759	chr5:157049759:G:A	rs1039438	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr5	157107714	157107715	chr5:157107715:G:A	rs74626883	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	157190667	157190668	chr5:157190668:G:A	rs163314	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	157336675	157336676	chr5:157336676:C:T	rs10043769	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr5	157346776	157346777	chr5:157346777:G:A	rs962459	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	157369475	157369476	chr5:157369476:G:A	rs150866710	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr5	157569749	157569750	chr5:157569750:C:G	rs7707786	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	157603483	157603484	chr5:157603484:A:T	rs181104972	A	T	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	157714082	157714083	chr5:157714083:T:C	rs114056081	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	157714084	157714085	chr5:157714085:G:C	rs13356556	G	C	G	Hoxc9_MA0485.1	1	1	+	9.493709429579875	8.3547489482482	AGAAATAAATCAA
chr5	158026346	158026347	chr5:158026347:G:A	rs533074922	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr5	158278244	158278245	chr5:158278245:T:C	rs1173459	T	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	158411533	158411534	chr5:158411534:G:A	rs4551053	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	158593416	158593417	chr5:158593417:A:G	rs1651274	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	158754273	158754274	chr5:158754274:C:G	rs72810383	C	G	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	158913599	158913600	chr5:158913600:A:G	rs13172711	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr5	159156710	159156711	chr5:159156711:T:C	rs145092198	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	159181871	159181872	chr5:159181872:T:C	rs34175829	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	159206634	159206635	chr5:159206635:G:A	rs62378717	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr5	159210987	159210988	chr5:159210988:T:G	rs2195933	T	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr5	159817603	159817604	chr5:159817604:C:T	rs114607122	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	159850452	159850453	chr5:159850453:G:A	rs115275643	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	159890408	159890409	chr5:159890409:C:T	rs6556460	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr5	159907096	159907097	chr5:159907097:T:C	rs76039967	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	159928908	159928909	chr5:159928909:T:C	rs74319842	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	159928934	159928935	chr5:159928935:G:A	rs114663835	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	160306705	160306706	chr5:160306706:T:C	rs13180487	T	C	t	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	160535184	160535185	chr5:160535185:A:G	rs4921146	A	G	G	Hoxc9_MA0485.1	8	1	+	8.971159811205123	2.069201301070164	TGAAATAAATCAA
chr5	160549258	160549259	chr5:160549259:T:C	rs10059502	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	160668997	160668998	chr5:160668998:G:C	rs77423861	G	C	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	160888061	160888062	chr5:160888062:G:T	rs10074326	G	T	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	160954904	160954905	chr5:160954905:G:A	rs17430099	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	161870428	161870429	chr5:161870429:C:T	rs62381655	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	162543677	162543678	chr5:162543678:T:C	rs1905582	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr5	163208510	163208511	chr5:163208511:G:C	rs59389435	G	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	163256767	163256768	chr5:163256768:T:C	rs214114	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr5	163439178	163439179	chr5:163439179:G:C	rs550507893	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	163489406	163489407	chr5:163489407:C:T	rs11748030	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr5	163489421	163489422	chr5:163489422:A:G	rs299316	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	163656114	163656115	chr5:163656115:A:G	rs158849	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	163662484	163662485	chr5:163662485:T:C	rs12520135	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	163789415	163789416	chr5:163789416:A:T	rs1943053	A	T	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	164052497	164052498	chr5:164052498:G:A	rs11959494	G	A	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr5	164058637	164058638	chr5:164058638:G:A	rs147999261	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	164799291	164799292	chr5:164799292:A:G	rs2963125	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	165003356	165003357	chr5:165003357:A:G	rs13173293	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr5	165093532	165093533	chr5:165093533:T:C	rs72809532	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr5	165093547	165093548	chr5:165093548:C:A	rs72809533	C	A	C	Hoxc9_MA0485.1	10	1	+	9.073584230437527	6.389583896563578	GACCATCAATCAG
chr5	165258643	165258644	chr5:165258644:T:A	rs35728418	T	A	t	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	165681192	165681193	chr5:165681193:A:G	rs61682315	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	165681205	165681206	chr5:165681206:A:C	rs58657048	A	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	166233970	166233971	chr5:166233971:T:A	rs1392277	T	A	T	Hoxc9_MA0485.1	6	1	-	9.499824361375124	5.971099895837608	GGTCATAAATTAA
chr5	167269356	167269357	chr5:167269357:A:G	rs116435450	A	G	A	Hoxc9_MA0485.1	5	1	-	9.625350090490702	5.1400387278522155	GCCAGTAAATCTC
chr5	167413671	167413672	chr5:167413672:T:C	rs78309091	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	167413685	167413686	chr5:167413686:T:A	rs10067798	T	A	T	Hoxc9_MA0485.1	8	1	-	10.356812052605667	3.45485354247071	GGCTGTAAATCTT
chr5	167647358	167647359	chr5:167647359:A:C	rs28634400	A	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr5	167790199	167790200	chr5:167790200:T:G	chr5:167790200:T:G	T	G	T	Hoxc9_MA0485.1	12	1	-	7.398992840949285	8.242728976697633	TGCCATCAATCCA
chr5	167807055	167807056	chr5:167807056:G:A	rs7707689	G	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr5	167832204	167832205	chr5:167832205:A:G	rs4869075	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr5	167877603	167877604	chr5:167877604:T:C	rs17526010	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	167945717	167945718	chr5:167945718:A:G	rs17069417	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	167968015	167968016	chr5:167968016:C:A	rs79847800	C	A	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr5	167968056	167968057	chr5:167968057:T:C	rs1422934	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	168765788	168765789	chr5:168765789:C:T	rs1480523373	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	168793860	168793861	chr5:168793861:C:T	rs569001313	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr5	168845021	168845022	chr5:168845022:A:G	rs143773034	A	G	A	Hoxc9_MA0485.1	11	1	+	10.075440956483018	5.662907557614649	GCCTGTAAATCAT
chr5	169079174	169079175	chr5:169079175:T:G	rs6874729	T	G	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	169142428	169142429	chr5:169142429:G:C	rs147935187	G	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	169192676	169192677	chr5:169192677:C:T	rs297896	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr5	169798516	169798517	chr5:169798517:C:T	rs6891722	C	T	c	Hoxc9_MA0485.1	0	1	-	8.413061569958941	7.880246436667939	GCACATAAATCCC
chr5	169798534	169798535	chr5:169798535:G:T	rs6892041	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr5	169814868	169814869	chr5:169814869:A:C	rs246768	A	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr5	169876014	169876015	chr5:169876015:G:A	rs724160	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	169964317	169964318	chr5:169964318:C:T	rs6555879	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	170008074	170008075	chr5:170008075:A:G	rs2173923	A	G	A	Hoxc9_MA0485.1	8	1	+	6.534704335622896	-0.36725417451206394	GGCAGTGAATCCC
chr5	170202166	170202167	chr5:170202167:T:G	rs6883745	T	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr5	170202178	170202179	chr5:170202179:C:T	rs12513823	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr5	170202189	170202190	chr5:170202190:C:A	rs58570160	C	A	C	Hoxc9_MA0485.1	3	1	+	8.623807664523497	7.889056456953029	GAACGTAAATCAT
chr5	170211729	170211730	chr5:170211730:A:G	rs79216999	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr5	170223388	170223389	chr5:170223389:A:G	rs73800744	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	170419782	170419783	chr5:170419783:T:G	chr5:170419783:T:G	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr5	170419788	170419789	chr5:170419789:A:G	rs1875958	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr5	170424060	170424061	chr5:170424061:G:A	rs2174416	G	A	G	Hoxc9_MA0485.1	0	1	+	11.351014952425142	10.81819981913414	GGACATAAATCAT
chr5	170579947	170579948	chr5:170579948:G:A	rs13355088	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr5	170752725	170752726	chr5:170752726:T:C	rs35202617	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	171322274	171322275	chr5:171322275:C:T	rs919325	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr5	171495268	171495269	chr5:171495269:C:T	rs187639059	C	T	C	Hoxc9_MA0485.1	0	1	-	7.0762691914478415	6.543454058156839	GGGCATGAATCAG
chr5	171601550	171601551	chr5:171601551:A:C	rs140656040	A	C	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr5	171611487	171611488	chr5:171611488:A:G	rs29619	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr5	171648945	171648946	chr5:171648946:C:A	rs154362	C	A	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	171661616	171661617	chr5:171661617:G:T	rs257370	G	T	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	171661622	171661623	chr5:171661623:T:C	rs56920429	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	171724226	171724227	chr5:171724227:T:C	rs10516089	T	C	T	Hoxc9_MA0485.1	11	1	+	7.809992906878805	6.6145924371887475	GTCTGTAAATCTG
chr5	171818542	171818543	chr5:171818543:A:G	rs10067974	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr5	172077560	172077561	chr5:172077561:C:T	rs9313574	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	172103039	172103040	chr5:172103040:C:T	rs144850432	C	T	C	Hoxc9_MA0485.1	3	1	+	6.626561256371136	5.7383084833485105	GGGCGTGAATCAC
chr5	172219427	172219428	chr5:172219428:C:T	rs10035786	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	172245896	172245897	chr5:172245897:G:A	rs6882674	G	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr5	172411076	172411077	chr5:172411077:C:T	rs4407643	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	172573323	172573324	chr5:172573324:T:C	rs10044047	T	C	T	Hoxc9_MA0485.1	4	1	-	7.828535808480775	6.66077209448919	TGCTATGAATCAG
chr5	172700830	172700831	chr5:172700831:A:G	rs115970462	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	172758307	172758308	chr5:172758308:C:G	rs79411743	C	G	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	172770035	172770036	chr5:172770036:T:C	rs35084382	T	C	T	Hoxc9_MA0485.1	9	1	+	8.784417823871365	1.8961920094977331	TGGAATAAATCAT
chr5	172870154	172870155	chr5:172870155:T:C	rs793021	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	172960530	172960531	chr5:172960531:G:A	rs7722536	G	A	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	173103557	173103558	chr5:173103558:T:C	rs793356	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	173187699	173187700	chr5:173187700:T:C	rs17075673	T	C	C	Hoxc9_MA0485.1	12	1	+	8.139206956270108	8.39320391003466	TGCAGTCAATCAT
chr5	173235938	173235939	chr5:173235939:C:G	rs115194292	C	G	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr5	173499082	173499083	chr5:173499083:C:A	rs148685377	C	A	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr5	173537496	173537497	chr5:173537497:G:T	rs7721535	G	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	173641109	173641110	chr5:173641110:G:C	rs11960742	G	C	G	Hoxc9_MA0485.1	3	1	-	7.945966025824625	2.4295695538389337	AGTCTTAAATCAC
chr5	173734725	173734726	chr5:173734726:C:A	rs7702385	C	A	C	Hoxc9_MA0485.1	2	1	-	7.887288108950436	9.206153773510522	GGGTATAAATCCC
chr5	173784088	173784089	chr5:173784089:C:T	rs10058137	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr5	174150377	174150378	chr5:174150378:C:T	rs79787868	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr5	174165785	174165786	chr5:174165786:A:G	rs7710772	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	174165791	174165792	chr5:174165792:C:T	rs7710929	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	174189769	174189770	chr5:174189770:C:T	rs6866159	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr5	174203500	174203501	chr5:174203501:A:C	rs11952072	A	C	A	Hoxc9_MA0485.1	9	1	-	8.387714869794005	1.4994890554203728	TACCATAAATTAG
chr5	174326267	174326268	chr5:174326268:T:A	rs2381878	T	A	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr5	174409293	174409294	chr5:174409294:C:T	rs57853601	C	T	C	Hoxc9_MA0485.1	10	1	+	8.46028723675802	6.65645133244927	CCACATAAATCAG
chr5	174574990	174574991	chr5:174574991:A:C	rs183436034	A	C	A	Hoxc9_MA0485.1	3	1	+	9.483752099051978	10.218503306622447	TCCAATAAATCTT
chr5	174608708	174608709	chr5:174608709:G:A	rs6866646	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	174608723	174608724	chr5:174608724:G:A	chr5:174608724:G:A	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr5	174735668	174735669	chr5:174735669:G:A	rs950499719	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr5	174788102	174788103	chr5:174788103:G:T	rs66704526	G	T	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr5	175264018	175264019	chr5:175264019:G:A	rs867342807	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	175288563	175288564	chr5:175288564:A:G	rs887436232	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	175341794	175341795	chr5:175341795:G:T	rs4242186	G	T	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr5	175484229	175484230	chr5:175484230:C:T	rs13180322	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr5	175563228	175563229	chr5:175563229:A:C	rs10044262	A	C	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr5	175709427	175709428	chr5:175709428:G:A	rs146797591	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	176547751	176547752	chr5:176547752:A:G	rs10059406	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr5	176604342	176604343	chr5:176604343:G:A	rs7714198	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr5	176606661	176606662	chr5:176606662:A:G	rs10044781	A	G	A	Hoxc9_MA0485.1	11	1	+	10.041721877832162	5.629188478963793	TGCCATCAATCAT
chr5	176700658	176700659	chr5:176700659:C:T	rs61352511	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr5	176729226	176729227	chr5:176729227:C:T	rs11134998	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr5	177374395	177374396	chr5:177374396:T:G	rs59436610	T	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr5	177692684	177692685	chr5:177692685:G:C	rs75399987	G	C	.	Hoxc9_MA0485.1	26	0	+	0	0	.
chr5	177959327	177959328	chr5:177959328:T:A	rs73339883	T	A	.	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr5	178106772	178106773	chr5:178106773:A:G	rs57472053	A	G	.	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr5	178320689	178320690	chr5:178320690:T:C	rs17081072	T	C	T	Hoxc9_MA0485.1	8	1	-	8.580375501631803	1.678416991496843	AGTCATGAATCAC
chr5	178332326	178332327	chr5:178332327:T:C	rs191623567	T	C	t	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr5	178476355	178476356	chr5:178476356:C:T	rs682003	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr5	178562687	178562688	chr5:178562688:C:A	rs262038	C	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr5	178598085	178598086	chr5:178598086:A:G	rs262023	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr5	178673925	178673926	chr5:178673926:G:A	rs10071738	G	A	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr5	178684439	178684440	chr5:178684440:T:C	rs17081596	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr5	178780607	178780608	chr5:178780608:G:A	rs12655129	G	A	.	Hoxc9_MA0485.1	19	0	+	0	0	.
chr5	179481968	179481969	chr5:179481969:G:T	rs4700834	G	T	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr5	179527096	179527097	chr5:179527097:G:C	rs1044858	G	C	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr5	179606959	179606960	chr5:179606960:T:C	rs68054433	T	C	t	Hoxc9_MA0485.1	29	0	+	0	0	.
chr5	179681975	179681976	chr5:179681976:G:A	rs6879412	G	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr5	179753568	179753569	chr5:179753569:G:A	rs78703004	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr5	179759316	179759317	chr5:179759317:C:T	rs34646062	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr5	179892765	179892766	chr5:179892766:C:T	rs27744	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr5	180303842	180303843	chr5:180303843:A:G	rs6874653	A	G	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr5	180494977	180494978	chr5:180494978:G:C	rs553636165	G	C	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	180689873	180689874	chr5:180689874:C:T	rs4074596	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr5	181268150	181268151	chr5:181268151:C:G	rs7726929	C	G	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr5	181473687	181473688	chr5:181473688:A:G	rs11744237	A	G	.	Hoxc9_MA0485.1	4	1	+	9.23933819987815	8.071574485886565	AGCCATGAATCAG
chr6	405451	405452	chr6:405452:T:A	rs11242862	T	A	A	Hoxc9_MA0485.1	0	1	-	8.14723853708783	7.624688918713078	AACCATCAATCTT
chr6	405456	405457	chr6:405457:T:C	rs2280118	T	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	422630	422631	chr6:422631:C:A	rs62389424	C	A	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	463422	463423	chr6:463423:T:G	rs1877772	T	G	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	544832	544833	chr6:544833:C:G	rs4535592	C	G	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	683803	683804	chr6:683804:C:T	rs17834207	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	716037	716038	chr6:716038:C:T	rs78813130	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	740914	740915	chr6:740915:C:A	rs2788233	C	A	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	1078328	1078329	chr6:1078329:T:G	rs2073019	T	G	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	1147538	1147539	chr6:1147539:G:T	rs11962082	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	1193231	1193232	chr6:1193232:T:G	rs238016	T	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	1256034	1256035	chr6:1256035:A:G	rs1812102	A	G	G	Hoxc9_MA0485.1	4	1	+	8.482275075906525	7.314511361914941	AAGCATAAATCAT
chr6	1365008	1365009	chr6:1365009:A:G	rs79318212	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	1365030	1365031	chr6:1365031:C:G	rs9392285	C	G	C	Hoxc9_MA0485.1	2	1	+	7.974697361713006	5.278813219991695	ACCCATGAATCAA
chr6	1365044	1365045	chr6:1365045:G:C	rs1711944	G	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	1392437	1392438	chr6:1392438:A:T	rs6901462	A	T	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	1513541	1513542	chr6:1513542:T:C	rs61096518	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	1519510	1519511	chr6:1519511:A:T	rs57770600	A	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	1578534	1578535	chr6:1578535:T:C	rs2569839	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	1626671	1626672	chr6:1626672:C:G	rs55702212	C	G	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	1816397	1816398	chr6:1816398:G:A	rs9378314	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	1838804	1838805	chr6:1838805:C:T	rs114184769	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr6	1851083	1851084	chr6:1851084:G:A	rs1467595	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	1885233	1885234	chr6:1885234:G:T	rs190168724	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	1904014	1904015	chr6:1904015:C:G	rs139725726	C	G	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	1904039	1904040	chr6:1904040:G:A	rs115911646	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	2022081	2022082	chr6:2022082:G:C	rs1319921	G	C	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	2240372	2240373	chr6:2240373:T:C	rs2479015	T	C	C	Hoxc9_MA0485.1	8	1	-	9.294615534495325	2.392657024360367	GGAAATAAATCTG
chr6	2243768	2243769	chr6:2243769:T:A	rs111687588	T	A	T	Hoxc9_MA0485.1	5	1	+	10.371029044825516	3.4724860691059223	AGCAGTAAATCAG
chr6	2436763	2436764	chr6:2436764:T:G	rs12209326	T	G	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	2449173	2449174	chr6:2449174:A:C	rs34077848	A	C	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	2504266	2504267	chr6:2504267:T:C	rs76220589	T	C	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	2508160	2508161	chr6:2508161:G:C	rs9503215	G	C	G	Hoxc9_MA0485.1	0	1	+	9.410565533505938	8.122857124320818	GGCTGTAAATTAT
chr6	2715912	2715913	chr6:2715913:T:C	rs149388849	T	C	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	2716248	2716249	chr6:2716249:C:T	rs57084793	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	2716284	2716285	chr6:2716285:A:T	rs6913006	A	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	2746805	2746806	chr6:2746806:G:A	rs72838577	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	2861376	2861377	chr6:2861377:A:G	rs66792821	A	G	A	Hoxc9_MA0485.1	4	1	+	10.622712580383652	9.454948866392069	TGCAATAAATCTT
chr6	2861396	2861397	chr6:2861397:T:C	rs62391492	T	C	-	Hoxc9_MA0485.1	24	0	+	0	0	.
chr6	2865793	2865794	chr6:2865794:A:G	rs76403624	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	2865832	2865833	chr6:2865833:A:G	rs34550995	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	2979664	2979665	chr6:2979665:C:T	rs111789886	C	T	c	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	3086771	3086772	chr6:3086772:C:G	rs9391981	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	3200236	3200237	chr6:3200237:G:A	rs367761565	G	A	G	Hoxc9_MA0485.1	12	1	+	7.5246731977827555	7.398992840949285	TGCCATCAATCCG
chr6	3279781	3279782	chr6:3279782:C:T	rs78408521	C	T	C	Hoxc9_MA0485.1	4	1	-	9.43015470827698	10.597918422268563	GTCCGTAAATCAA
chr6	3279793	3279794	chr6:3279794:C:G	rs147613996	C	G	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	3295062	3295063	chr6:3295063:A:G	rs3935360	A	G	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	3367044	3367045	chr6:3367045:C:T	rs139857797	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	3372251	3372252	chr6:3372252:T:C	rs1079286	T	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	3372252	3372253	chr6:3372253:C:T	rs1079285	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	3485069	3485070	chr6:3485070:T:C	rs1205033	T	C	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	3485076	3485077	chr6:3485077:T:C	rs1205034	T	C	C	Hoxc9_MA0485.1	8	1	-	7.0762691914478415	0.17431068131288174	GGGCATGAATCAG
chr6	3720028	3720029	chr6:3720029:G:A	rs12198284	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	3743380	3743381	chr6:3743381:C:T	rs144414546	C	T	C	Hoxc9_MA0485.1	12	1	+	9.628320267083636	9.374323313319083	AACCATAAATTAC
chr6	3748955	3748956	chr6:3748956:C:T	rs111978682	C	T	T	Hoxc9_MA0485.1	2	1	+	9.121759799698015	7.744741322536794	AACAATAAATCTG
chr6	3804321	3804322	chr6:3804322:T:C	rs4275102	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	3833687	3833688	chr6:3833688:A:C	rs6597005	A	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	4016113	4016114	chr6:4016114:T:C	rs12110567	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	4574551	4574552	chr6:4574552:T:C	rs80256896	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	4638964	4638965	chr6:4638965:T:C	rs234407	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	4913955	4913956	chr6:4913956:G:T	rs4960049	G	T	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	4937919	4937920	chr6:4937920:T:C	rs550336833	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	4986015	4986016	chr6:4986016:G:A	rs13197142	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	5011488	5011489	chr6:5011489:C:T	rs2764189	C	T	.	Hoxc9_MA0485.1	0	1	+	10.183716614509246	10.416060272028615	CGCCATAAATCCC
chr6	5030782	5030783	chr6:5030783:T:C	rs111609246	T	C	.	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	5143875	5143876	chr6:5143876:C:T	rs147072741	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	5143889	5143890	chr6:5143890:G:A	rs9504351	G	A	G	Hoxc9_MA0485.1	12	1	-	8.989436452322154	8.735439498557602	ATACATAAATCAC
chr6	5171947	5171948	chr6:5171948:T:C	rs34519114	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	5442819	5442820	chr6:5442820:A:G	rs200202	A	G	a	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	5453873	5453874	chr6:5453874:C:T	rs138217638	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	5701307	5701308	chr6:5701308:G:A	rs9405281	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	5910071	5910072	chr6:5910072:C:T	rs1001289	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	5910095	5910096	chr6:5910096:T:C	rs1001290	T	C	C	Hoxc9_MA0485.1	8	1	-	9.512753198988632	2.6107946888536713	AAACATAAATCAC
chr6	5997120	5997121	chr6:5997121:T:C	chr6:5997121:T:C	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	6391139	6391140	chr6:6391140:C:G	rs6940363	C	G	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	6560498	6560499	chr6:6560499:T:G	rs1761939	T	G	T	Hoxc9_MA0485.1	5	1	+	8.472295488076197	1.5737525123566005	GTTAATAAATCTC
chr6	6569954	6569955	chr6:6569955:C:T	rs113798843	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr6	6655659	6655660	chr6:6655660:A:G	rs3765289	A	G	A	Hoxc9_MA0485.1	4	1	+	8.052072888367556	6.884309174375971	TGCTATTAATCAC
chr6	6703867	6703868	chr6:6703868:A:G	rs201035	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr6	6736909	6736910	chr6:6736910:G:C	rs137971138	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	6736938	6736939	chr6:6736939:C:T	rs9504911	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	6782064	6782065	chr6:6782065:A:G	rs4960246	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	6911217	6911218	chr6:6911218:G:A	rs2249382	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	6911242	6911243	chr6:6911243:A:G	rs998271	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	6911244	6911245	chr6:6911245:A:G	rs998272	A	G	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	6942684	6942685	chr6:6942685:G:A	rs2490294	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	7053675	7053676	chr6:7053676:C:A	rs72814929	C	A	A	Hoxc9_MA0485.1	2	1	+	8.806973102061468	6.887570129657713	GGCTGTAAATTTC
chr6	7053676	7053677	chr6:7053677:T:A	rs72814930	T	A	A	Hoxc9_MA0485.1	3	1	+	8.806973102061468	8.960474667513623	GGCTGTAAATTTC
chr6	7074071	7074072	chr6:7074072:C:T	rs147912720	C	T	C	Hoxc9_MA0485.1	10	1	+	9.379166316493306	7.575330412184554	AACCATAAATCCC
chr6	7314998	7314999	chr6:7314999:A:C	rs10080449	A	C	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	7315041	7315042	chr6:7315042:G:A	rs10080677	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	7345087	7345088	chr6:7345088:C:T	rs9767781	C	T	c	Hoxc9_MA0485.1	2	1	+	9.454948866392069	8.077930389230845	TGCAGTAAATCTT
chr6	7355284	7355285	chr6:7355285:C:T	rs2764075	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	7467446	7467447	chr6:7467447:G:A	rs2806204	G	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	7592905	7592906	chr6:7592906:C:T	rs2806223	C	T	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	7729380	7729381	chr6:7729381:C:T	rs270417	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	7762995	7762996	chr6:7762996:C:T	rs34777872	C	T	c	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	7821644	7821645	chr6:7821645:A:T	rs79845371	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr6	7887900	7887901	chr6:7887901:C:T	rs7759451	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	7887934	7887935	chr6:7887935:C:T	rs89715	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	7908236	7908237	chr6:7908237:T:C	rs1225960	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	7954657	7954658	chr6:7954658:T:C	rs79727521	T	C	T	Hoxc9_MA0485.1	5	1	+	8.100820625320972	3.6155092626824876	ACCAATCAATCAA
chr6	8000732	8000733	chr6:8000733:C:T	rs149996352	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	9131697	9131698	chr6:9131698:T:G	rs76056159	T	G	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr6	9225570	9225571	chr6:9225571:T:A	rs145553420	T	A	T	Hoxc9_MA0485.1	7	1	-	7.6582600802780805	2.4624088713615047	TGACATCAATCAG
chr6	9564165	9564166	chr6:9564166:G:A	rs12195551	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	9564169	9564170	chr6:9564170:C:T	rs76373692	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	10147325	10147326	chr6:10147326:G:A	rs4710891	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	10236095	10236096	chr6:10236096:T:A	rs6456295	T	A	A	Hoxc9_MA0485.1	8	1	-	8.480429305081671	1.5784707949467123	ACAAATAAATCAG
chr6	10276215	10276216	chr6:10276216:T:C	rs9465760	T	C	T	Hoxc9_MA0485.1	12	1	+	9.442775356328871	9.696772310093424	GGCCATAAAACAT
chr6	10338259	10338260	chr6:10338260:A:G	rs4601120	A	G	A	Hoxc9_MA0485.1	3	1	+	10.622712580383652	5.8410673159684325	TGCAATAAATCTT
chr6	10383998	10383999	chr6:10383999:A:T	rs572633	A	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	10451635	10451636	chr6:10451636:T:A	rs71561197	T	A	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	10462637	10462638	chr6:10462638:C:T	rs9393276	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	10601462	10601463	chr6:10601463:G:T	rs76344834	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	10741927	10741928	chr6:10741928:C:T	rs524544	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	10883812	10883813	chr6:10883813:G:A	rs3756961	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	10957532	10957533	chr6:10957533:C:T	rs7745438	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	11025927	11025928	chr6:11025928:T:C	rs958712	T	C	T	Hoxc9_MA0485.1	8	1	-	9.96513219268719	3.063173682552232	GACTATAAATCTT
chr6	11088212	11088213	chr6:11088213:A:G	rs116495592	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	11094708	11094709	chr6:11094709:A:T	rs1314964258	A	T	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	11202123	11202124	chr6:11202124:C:T	rs2146342	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	11269232	11269233	chr6:11269233:A:C	rs10947075	A	C	A	Hoxc9_MA0485.1	7	1	+	8.568794807595145	1.6645657383895676	GACAATAAATTTC
chr6	11439409	11439410	chr6:11439410:T:A	rs16871350	T	A	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	11715109	11715110	chr6:11715110:T:C	rs369981545	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	11738982	11738983	chr6:11738983:G:T	rs210891	G	T	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	11770917	11770918	chr6:11770918:T:C	rs149009350	T	C	t	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	11770952	11770953	chr6:11770953:C:T	chr6:11770953:C:T	C	T	c	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	11789576	11789577	chr6:11789577:G:A	rs56204575	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	11809977	11809978	chr6:11809978:A:G	rs34927257	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	11978507	11978508	chr6:11978508:C:T	rs12204035	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	12017457	12017458	chr6:12017458:G:A	rs193017390	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	12017459	12017460	chr6:12017460:G:C	rs546165754	G	C	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	12043820	12043821	chr6:12043821:T:C	rs9470843	T	C	T	Hoxc9_MA0485.1	4	1	-	9.26836086858994	8.100597154598358	AGACATAAATTAC
chr6	12150200	12150201	chr6:12150201:G:A	rs16872314	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr6	12172833	12172834	chr6:12172834:A:G	rs9380878	A	G	A	Hoxc9_MA0485.1	9	1	-	9.278591122091859	2.3903653077182265	TATCATAAATCAT
chr6	12280637	12280638	chr6:12280638:T:C	rs6938692	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	12286604	12286605	chr6:12286605:A:G	rs9380978	A	G	A	Hoxc9_MA0485.1	9	1	-	8.271222121258655	1.3829963068850244	GCCAATAAATTTG
chr6	12504734	12504735	chr6:12504735:T:C	rs1413513	T	C	T	Hoxc9_MA0485.1	8	1	-	8.33423634165083	1.43227783151587	AGCATTAAATCAT
chr6	12512103	12512104	chr6:12512104:A:G	rs9369393	A	G	A	Hoxc9_MA0485.1	5	1	-	10.032973398399855	5.5476620357613715	TGCAATAAATCTA
chr6	12512111	12512112	chr6:12512112:A:G	rs9369394	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr6	12570540	12570541	chr6:12570541:T:C	rs79353980	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	12570565	12570566	chr6:12570566:T:C	rs78725675	T	C	T	Hoxc9_MA0485.1	5	1	+	8.716788581503398	4.231477218864911	TGCCATGAATCAG
chr6	12762581	12762582	chr6:12762582:T:G	rs13217579	T	G	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	13188538	13188539	chr6:13188539:G:T	rs1150604	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	13283970	13283971	chr6:13283971:C:T	rs435465	C	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	13283971	13283972	chr6:13283972:C:T	rs435466	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	13284743	13284744	chr6:13284744:C:T	rs74941053	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	13289859	13289860	chr6:13289860:G:A	rs76551156	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	13548549	13548550	chr6:13548550:A:G	rs9474526	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	13771210	13771211	chr6:13771211:C:T	rs13219011	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	13871140	13871141	chr6:13871141:T:C	rs1204233	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	14016931	14016932	chr6:14016932:A:G	rs13194113	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	14016966	14016967	chr6:14016967:G:C	rs1999198	G	C	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	14026904	14026905	chr6:14026905:C:T	rs376383357	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	14317106	14317107	chr6:14317107:G:A	rs185448366	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	14354619	14354620	chr6:14354620:T:C	rs6930173	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	14451044	14451045	chr6:14451045:T:C	rs9370742	T	C	C	Hoxc9_MA0485.1	11	1	-	8.563726694810166	4.151193295941797	AGGTATAAATCAA
chr6	14639380	14639381	chr6:14639381:A:C	rs116234154	A	C	A	Hoxc9_MA0485.1	7	1	+	9.419346638405875	2.515117569200296	AGCTATAAATAAC
chr6	14792244	14792245	chr6:14792245:A:C	rs768543	A	C	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	14817132	14817133	chr6:14817133:G:C	rs72826845	G	C	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	14944745	14944746	chr6:14944746:T:C	rs9349962	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	14944759	14944760	chr6:14944760:G:A	rs16875934	G	A	G	Hoxc9_MA0485.1	2	1	+	7.299806271334622	8.076287440652177	GGGCATTAATCAC
chr6	14982260	14982261	chr6:14982261:T:C	rs34333023	T	C	T	Hoxc9_MA0485.1	9	1	+	8.526232314734585	1.6380065003609539	GTCCATAAATTTT
chr6	15089375	15089376	chr6:15089376:C:T	rs9358050	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	15262779	15262780	chr6:15262780:G:A	rs10949290	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr6	15417937	15417938	chr6:15417938:C:G	rs115368595	C	G	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	15464296	15464297	chr6:15464297:C:T	rs2299042	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	15755386	15755387	chr6:15755387:A:G	rs1927579	A	G	A	Hoxc9_MA0485.1	5	1	-	10.357280442196004	5.871969079557517	TGTAATAAATCAC
chr6	15829323	15829324	chr6:15829324:A:G	rs7745776	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	16174790	16174791	chr6:16174791:G:A	rs13206249	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	16174791	16174792	chr6:16174792:T:C	rs6906805	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	16174798	16174799	chr6:16174799:C:T	rs6922889	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	16197260	16197261	chr6:16197261:A:G	rs2142670	A	G	g	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	16239718	16239719	chr6:16239719:C:T	rs76905409	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	16397719	16397720	chr6:16397720:A:G	rs116103784	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	16423348	16423349	chr6:16423349:T:C	rs1543359	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	16658863	16658864	chr6:16658864:C:T	rs909786	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	16658899	16658900	chr6:16658900:T:A	rs760882	T	A	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr6	16776619	16776620	chr6:16776620:A:G	rs78585626	A	G	A	Hoxc9_MA0485.1	8	1	+	9.493709429579875	2.591750919444916	AGAAATAAATCAA
chr6	16900640	16900641	chr6:16900641:G:A	rs6915537	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	17119288	17119289	chr6:17119289:T:C	rs11965937	T	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	17295940	17295941	chr6:17295941:A:G	rs9370972	A	G	A	Hoxc9_MA0485.1	9	1	-	8.810644642227256	1.9224188278536256	TTCCATAAATCTG
chr6	17297732	17297733	chr6:17297733:C:A	rs74365341	C	A	C	Hoxc9_MA0485.1	1	1	-	10.527701808155921	8.444941487579385	AGCTATAAATCTG
chr6	17354922	17354923	chr6:17354923:A:G	rs111967236	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	17397799	17397800	chr6:17397800:G:A	rs73367826	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	17473695	17473696	chr6:17473696:T:G	rs1320995	T	G	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	17505157	17505158	chr6:17505158:T:G	rs113106809	T	G	T	Hoxc9_MA0485.1	6	1	-	9.302530872788408	7.129199577457425	ATCTATAAATCAG
chr6	17505159	17505160	chr6:17505160:T:C	rs936762284	T	C	T	Hoxc9_MA0485.1	4	1	-	9.302530872788408	8.134767158796823	ATCTATAAATCAG
chr6	17679913	17679914	chr6:17679914:C:A	rs79295215	C	A	C	Hoxc9_MA0485.1	12	1	-	9.69497786099861	10.159036686148937	TGCTGTAAATCAG
chr6	17851938	17851939	chr6:17851939:A:T	rs77900401	A	T	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	18016546	18016547	chr6:18016547:A:G	rs4418195	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr6	18371715	18371716	chr6:18371716:T:G	rs9885748	T	G	g	Hoxc9_MA0485.1	1	1	-	8.535430180744957	8.955913273323343	AACCATAAATCCA
chr6	18381919	18381920	chr6:18381920:G:A	rs115037515	G	A	a	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	18405539	18405540	chr6:18405540:G:A	rs6924478	G	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	18513457	18513458	chr6:18513458:C:T	rs76980464	C	T	C	Hoxc9_MA0485.1	2	1	-	7.216097308062999	7.992578477380553	GAGCATAAATCCC
chr6	18585380	18585381	chr6:18585381:G:T	rs760828	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	18680556	18680557	chr6:18680557:C:A	rs75569515	C	A	C	Hoxc9_MA0485.1	1	1	-	8.927460407844725	6.844700087268185	TGCCATAAATATC
chr6	18793368	18793369	chr6:18793369:C:T	rs1418962	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	19127283	19127284	chr6:19127284:C:T	rs148627202	C	T	C	Hoxc9_MA0485.1	2	1	+	7.312370479168238	5.935352002007014	GCCTGTCAATCAA
chr6	19271364	19271365	chr6:19271365:C:T	rs113791389	C	T	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	19327886	19327887	chr6:19327887:G:A	rs7750685	G	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	19473133	19473134	chr6:19473134:T:C	rs34156533	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	19600289	19600290	chr6:19600290:A:C	rs2743618	A	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	19721449	19721450	chr6:19721450:T:A	rs6918737	T	A	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	19763421	19763422	chr6:19763422:A:G	rs9350178	A	G	A	Hoxc9_MA0485.1	11	1	-	7.588312012678523	6.3929115429884655	AGCCATAAAACTG
chr6	19804874	19804875	chr6:19804875:A:C	chr6:19804875:A:C	A	C	A	Hoxc9_MA0485.1	4	1	+	7.898441644267009	2.76051496301735	GCCAATGAATCAG
chr6	19804889	19804890	chr6:19804890:G:C	rs369111289	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	19804893	19804894	chr6:19804894:G:A	rs116293473	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	19838758	19838759	chr6:19838759:C:G	rs9460423	C	G	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	20255383	20255384	chr6:20255384:C:A	rs7767762	C	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	20278849	20278850	chr6:20278850:A:C	rs75826536	A	C	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	20401001	20401002	chr6:20401002:G:C	rs1033989832	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	20401025	20401026	chr6:20401026:G:A	rs143862263	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	20528602	20528603	chr6:20528603:G:A	rs9460517	G	A	a	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	20575300	20575301	chr6:20575301:A:G	rs191612876	A	G	A	Hoxc9_MA0485.1	0	1	+	8.752327549399304	9.285142682690307	ATCAGTAAATCAT
chr6	20847156	20847157	chr6:20847157:C:T	rs7742468	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	20990890	20990891	chr6:20990891:A:G	chr6:20990891:A:G	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	21078852	21078853	chr6:21078853:T:C	rs10080639	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	21167746	21167747	chr6:21167747:A:C	rs9368285	A	C	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	21281704	21281705	chr6:21281705:T:G	rs807839	T	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr6	21451572	21451573	chr6:21451573:G:A	rs9466090	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	21593209	21593210	chr6:21593210:T:G	rs772065795	T	G	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	21609403	21609404	chr6:21609404:G:A	rs7740142	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	21967733	21967734	chr6:21967734:G:A	rs114592800	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	22133535	22133536	chr6:22133536:G:T	rs77443438	G	T	G	Hoxc9_MA0485.1	1	1	+	12.469050126927696	10.386289806351158	TGCCATAAATCAC
chr6	22314292	22314293	chr6:22314293:T:C	rs2185590	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	22343620	22343621	chr6:22343621:G:A	rs551391338	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	22471494	22471495	chr6:22471495:A:G	rs76441448	A	G	A	Hoxc9_MA0485.1	11	1	-	8.255601249713783	7.060200780023725	GGTCATGAATCTC
chr6	23011813	23011814	chr6:23011814:T:C	rs2498238	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	23067444	23067445	chr6:23067445:A:G	rs7753085	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	23278187	23278188	chr6:23278188:A:G	rs73384831	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	23319816	23319817	chr6:23319817:T:C	rs2147855	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	23630889	23630890	chr6:23630890:G:T	rs17211240	G	T	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	23643032	23643033	chr6:23643033:T:C	rs2031390	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	23689115	23689116	chr6:23689116:C:A	rs17213333	C	A	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	23690222	23690223	chr6:23690223:C:T	rs1324676	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	24010035	24010036	chr6:24010036:G:A	rs9295612	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	24010113	24010114	chr6:24010114:G:C	rs1397845	G	C	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	24053160	24053161	chr6:24053161:T:C	rs9358745	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	24283758	24283759	chr6:24283759:C:T	rs576319506	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	24283795	24283796	chr6:24283796:C:G	rs116422989	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	24385503	24385504	chr6:24385504:C:T	rs793708	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	24468793	24468794	chr6:24468794:C:T	rs2817231	C	T	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	24669243	24669244	chr6:24669244:C:G	rs2223589	C	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	24902938	24902939	chr6:24902939:C:T	rs80257472	C	T	c	Hoxc9_MA0485.1	28	0	-	0	0	.
chr6	24924471	24924472	chr6:24924472:T:C	rs6925479	T	C	t	Hoxc9_MA0485.1	3	1	-	8.811585470915455	4.0299402065002345	AACAGTAAATCAG
chr6	24930473	24930474	chr6:24930474:A:G	rs139666716	A	G	a	Hoxc9_MA0485.1	6	1	+	12.80635909967857	9.77215333316915	GGCCATAAATCAG
chr6	25158116	25158117	chr6:25158117:A:G	rs1813886	A	G	G	Hoxc9_MA0485.1	5	1	-	8.459809879417264	3.974498516778781	GACCATAAATTTA
chr6	25219001	25219002	chr6:25219002:G:A	rs6939764	G	A	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	25219408	25219409	chr6:25219409:C:T	chr6:25219409:C:T	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	25303053	25303054	chr6:25303054:G:C	rs73394120	G	C	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	25311645	25311646	chr6:25311646:G:T	rs74390266	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	25489860	25489861	chr6:25489861:C:T	rs301394	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	25925594	25925595	chr6:25925595:A:G	rs7770139	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	26012478	26012479	chr6:26012479:A:G	rs66536062	A	G	A	Hoxc9_MA0485.1	8	1	+	8.761800401204322	1.8598418910693644	AGAAATAAATCTG
chr6	26027082	26027083	chr6:26027083:C:T	rs751486416	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	26109919	26109920	chr6:26109920:T:C	rs13206501	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	26354551	26354552	chr6:26354552:A:C	rs9379851	A	C	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	26415569	26415570	chr6:26415570:G:A	rs4711109	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	26461504	26461505	chr6:26461505:G:A	rs9393722	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	26461507	26461508	chr6:26461508:T:C	rs9357007	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	27062858	27062859	chr6:27062859:C:T	rs73401117	C	T	C	Hoxc9_MA0485.1	0	1	+	9.03991313000335	9.272256787522718	CCCCATAAATTAT
chr6	27078974	27078975	chr6:27078975:C:T	rs9357031	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	27091663	27091664	chr6:27091664:A:T	rs926300	A	T	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	27133585	27133586	chr6:27133586:C:T	rs552827326	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	27392586	27392587	chr6:27392587:A:T	rs9461379	A	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	27423463	27423464	chr6:27423464:T:A	rs12212288	T	A	a	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	27424330	27424331	chr6:27424331:A:G	rs12528904	A	G	g	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	27478509	27478510	chr6:27478510:C:G	rs4713107	C	G	G	Hoxc9_MA0485.1	4	1	-	7.9338540173827825	3.9636910501247087	CACCGTAAATCTG
chr6	27568470	27568471	chr6:27568471:T:C	rs187625863	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr6	27617730	27617731	chr6:27617731:G:A	rs80044645	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	27687242	27687243	chr6:27687243:C:T	rs77655349	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	27816649	27816650	chr6:27816650:A:G	rs9295750	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	28607140	28607141	chr6:28607141:A:G	rs573490069	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	28686835	28686836	chr6:28686836:C:T	rs4711178	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	28806432	28806433	chr6:28806433:T:C	rs59303422	T	C	T	Hoxc9_MA0485.1	11	1	-	8.6580839054633	4.245550506594932	AACTGTAAATCAG
chr6	28872101	28872102	chr6:28872102:A:G	rs209160	A	G	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	29268941	29268942	chr6:29268942:A:G	rs186042794	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	29466517	29466518	chr6:29466518:C:T	rs2107191	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	29563704	29563705	chr6:29563705:T:C	rs362528	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	29596708	29596709	chr6:29596709:T:G	rs28893514	T	G	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	29693678	29693679	chr6:29693679:A:T	rs2894113	A	T	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	29705408	29705409	chr6:29705409:C:T	rs3116793	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	29736622	29736623	chr6:29736623:T:C	rs1736913	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	29736665	29736666	chr6:29736666:C:T	rs9258207	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr6	29741456	29741457	chr6:29741457:C:T	rs2743951	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	29947371	29947372	chr6:29947372:A:G	rs2975046	A	G	-	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	29947392	29947393	chr6:29947393:G:A	rs7763052	G	A	-	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	29968529	29968530	chr6:29968530:A:T	rs4959037	A	T	-	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	30062411	30062412	chr6:30062412:T:A	rs9261271	T	A	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	30136062	30136063	chr6:30136063:C:T	rs9261466	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	30319449	30319450	chr6:30319450:A:G	rs181030896	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	30484126	30484127	chr6:30484127:T:C	rs3094694	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	30728308	30728309	chr6:30728309:C:T	rs41270533	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	30743185	30743186	chr6:30743186:A:G	rs181201408	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	30744549	30744550	chr6:30744550:G:A	rs2301277	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	30770264	30770265	chr6:30770265:C:T	rs9262182	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	30779305	30779306	chr6:30779306:T:C	rs73425726	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	30788115	30788116	chr6:30788116:C:A	rs16897900	C	A	C	Hoxc9_MA0485.1	3	1	+	10.416060272028615	9.681309064458146	TGCCATAAATCCC
chr6	30815451	30815452	chr6:30815452:T:C	rs114101140	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	30815464	30815465	chr6:30815465:G:A	rs9501489	G	A	g	Hoxc9_MA0485.1	10	1	-	10.622712580383652	8.8188766760749	TGCAATAAATCTT
chr6	30890116	30890117	chr6:30890117:G:A	rs1264322	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	30939623	30939624	chr6:30939624:C:T	rs75205812	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	30955957	30955958	chr6:30955958:T:C	rs73727141	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	31074830	31074831	chr6:31074831:T:G	rs2523881	T	G	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	31178213	31178214	chr6:31178214:C:T	rs3871248	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	31196446	31196447	chr6:31196447:C:G	rs9501070	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	31196457	31196458	chr6:31196458:T:C	rs3094611	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	31196485	31196486	chr6:31196486:A:G	rs150632192	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	31196493	31196494	chr6:31196494:G:A	rs6922994	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr6	31246324	31246325	chr6:31246325:C:T	rs972403239	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	31280656	31280657	chr6:31280657:A:G	rs9264758	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	31305677	31305678	chr6:31305678:T:C	rs9264928	T	C	t	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	31305719	31305720	chr6:31305720:A:G	rs2508008	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr6	31345085	31345086	chr6:31345086:G:C	rs2508002	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	31345086	31345087	chr6:31345087:C:A	rs2508001	C	A	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	31351889	31351890	chr6:31351890:G:A	rs2442727	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	31351919	31351920	chr6:31351920:A:G	rs9391847	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	31425615	31425616	chr6:31425616:C:T	rs73402240	C	T	-	Hoxc9_MA0485.1	4	1	-	7.256823412945997	8.42458712693758	GTCCGTCAATCAA
chr6	31588931	31588932	chr6:31588932:A:G	rs986475	A	G	A	Hoxc9_MA0485.1	5	1	-	8.559158876197435	4.073847513558947	CCCAATAAATTAC
chr6	31852865	31852866	chr6:31852866:A:G	rs2736429	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	31852881	31852882	chr6:31852882:T:C	rs7451017	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	32289788	32289789	chr6:32289789:G:A	rs926070	G	A	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	32439524	32439525	chr6:32439525:A:G	rs2395179	A	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	32462548	32462549	chr6:32462549:T:A	rs9268864	T	A	.	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	32462584	32462585	chr6:32462585:C:G	rs4428528	C	G	.	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	32470764	32470765	chr6:32470765:T:C	rs9368726	T	C	.	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	32623212	32623213	chr6:32623213:T:C	rs35399661	T	C	.	Hoxc9_MA0485.1	9	1	+	9.438060815550365	2.549835001176735	TGACATAAATCTT
chr6	32623223	32623224	chr6:32623224:A:G	rs34136716	A	G	.	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	32635458	32635459	chr6:32635459:T:A	rs9272260	T	A	.	Hoxc9_MA0485.1	6	1	+	7.7181910602309935	11.24691552576851	GACCATTAATCAG
chr6	32635464	32635465	chr6:32635465:G:A	rs9272261	G	A	.	Hoxc9_MA0485.1	12	1	+	7.7181910602309935	7.592510703397523	GACCATTAATCAG
chr6	32665935	32665936	chr6:32665936:A:G	rs9274477	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	32665966	32665967	chr6:32665967:C:T	rs9274478	C	T	c	Hoxc9_MA0485.1	20	0	+	0	0	.
chr6	32695786	32695787	chr6:32695787:A:G	rs5000634	A	G	a	Hoxc9_MA0485.1	1	1	-	8.752327549399304	9.69612738864417	ATCAGTAAATCAT
chr6	32823204	32823205	chr6:32823205:T:C	rs57654360	T	C	c	Hoxc9_MA0485.1	9	1	+	7.261509837071716	0.37328402269808375	AGGCATGAATCAC
chr6	32849996	32849997	chr6:32849997:T:G	rs2395269	T	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	33018214	33018215	chr6:33018215:T:A	rs4713605	T	A	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	33144618	33144619	chr6:33144619:T:C	rs114350520	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	33177932	33177933	chr6:33177933:A:G	rs2855423	A	G	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	33391089	33391090	chr6:33391090:G:A	rs187710967	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	33416559	33416560	chr6:33416560:C:T	rs1337213550	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	33791923	33791924	chr6:33791924:T:A	rs9394168	T	A	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	33908221	33908222	chr6:33908222:C:T	rs73744913	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	34069774	34069775	chr6:34069775:A:G	rs2499685	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	34227233	34227234	chr6:34227234:G:T	rs1776897	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	35020613	35020614	chr6:35020614:C:A	rs2689089	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	35558812	35558813	chr6:35558813:C:A	rs9470059	C	A	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	35601784	35601785	chr6:35601785:A:G	rs16878812	A	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	35646248	35646249	chr6:35646249:T:C	rs4713902	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	35955468	35955469	chr6:35955469:T:C	rs2295852	T	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	36362735	36362736	chr6:36362736:C:T	rs12190328	C	T	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	36449408	36449409	chr6:36449409:T:C	rs6917981	T	C	t	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	36510148	36510149	chr6:36510149:A:G	rs10947609	A	G	G	Hoxc9_MA0485.1	0	1	+	10.564271496206912	11.097086629497914	AGCCATCAATCAT
chr6	36755111	36755112	chr6:36755112:T:C	rs236447	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	36920382	36920383	chr6:36920383:T:A	rs13192293	T	A	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	36973028	36973029	chr6:36973029:T:C	rs831506	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	37005689	37005690	chr6:37005690:A:G	rs542216976	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	37007016	37007017	chr6:37007017:A:G	rs72848053	A	G	A	Hoxc9_MA0485.1	4	1	+	9.846867285382556	8.679103571390973	GCCAATAAATTAC
chr6	37210557	37210558	chr6:37210558:C:G	rs78443280	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	37241840	37241841	chr6:37241841:C:T	rs55914827	C	T	C	Hoxc9_MA0485.1	0	1	-	10.08956354335892	9.55674841006792	GGTCATAAATTAT
chr6	37315093	37315094	chr6:37315094:T:G	chr6:37315094:T:G	T	G	T	Hoxc9_MA0485.1	2	1	+	9.130328970352894	7.811463305792809	GGTCATCAATCAA
chr6	37315099	37315100	chr6:37315100:A:G	rs73732933	A	G	A	Hoxc9_MA0485.1	8	1	+	9.130328970352894	2.228370460217935	GGTCATCAATCAA
chr6	37484214	37484215	chr6:37484215:T:C	rs78862533	T	C	T	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	37490763	37490764	chr6:37490764:A:G	rs138568659	A	G	A	Hoxc9_MA0485.1	8	1	+	7.8763330606072515	0.9743745504722916	GGCCGTCAATCCT
chr6	37517071	37517072	chr6:37517072:C:T	rs73730780	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	37554493	37554494	chr6:37554494:G:T	rs151142660	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	37973183	37973184	chr6:37973184:G:A	rs11756030	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	38131643	38131644	chr6:38131644:C:T	rs76465050	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	38183866	38183867	chr6:38183867:C:T	rs79334662	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr6	38480093	38480094	chr6:38480094:A:T	rs13219518	A	T	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr6	39104033	39104034	chr6:39104034:T:C	rs228804	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	39146030	39146031	chr6:39146031:G:T	rs6903109	G	T	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	39369082	39369083	chr6:39369083:A:T	rs4711595	A	T	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	39470693	39470694	chr6:39470694:C:G	rs28533484	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	39524576	39524577	chr6:39524577:G:C	rs73732127	G	C	C	Hoxc9_MA0485.1	10	1	-	8.24949108433935	3.4484202765920737	GGCTTTAAATCAG
chr6	40283452	40283453	chr6:40283453:C:T	rs78757377	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	40324429	40324430	chr6:40324430:C:T	rs2395743	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	40337554	40337555	chr6:40337555:G:A	rs12530143	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	40341198	40341199	chr6:40341199:A:G	rs9471314	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr6	40393741	40393742	chr6:40393742:C:G	rs1991873	C	G	G	Hoxc9_MA0485.1	1	1	-	8.344911317689885	7.205950836358211	CGCCATGAATCTC
chr6	40393751	40393752	chr6:40393752:C:A	rs56084097	C	A	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	40439392	40439393	chr6:40439393:G:A	rs1865255	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	40477494	40477495	chr6:40477495:G:A	rs16893656	G	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	40486668	40486669	chr6:40486669:T:G	rs1433731	T	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr6	40600016	40600017	chr6:40600017:C:G	rs75981274	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	40621022	40621023	chr6:40621023:A:G	rs1737677	A	G	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	40727583	40727584	chr6:40727584:C:T	rs34928256	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	40763211	40763212	chr6:40763212:C:T	rs117449200	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	40847917	40847918	chr6:40847918:T:A	rs4714396	T	A	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	40849773	40849774	chr6:40849774:C:T	rs116559647	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	40904412	40904413	chr6:40904413:T:C	rs4714405	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	40983806	40983807	chr6:40983807:G:A	rs7743897	G	A	G	Hoxc9_MA0485.1	12	1	-	7.933465810408145	7.679468856643594	ACCTATCAATCTC
chr6	41471510	41471511	chr6:41471511:T:C	rs12528612	T	C	T	Hoxc9_MA0485.1	8	1	-	9.772596239943649	2.8706377298086903	GGCAATCAATCAA
chr6	41658886	41658887	chr6:41658887:T:C	rs2746182	T	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	41705907	41705908	chr6:41705908:G:A	rs12525948	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	41908596	41908597	chr6:41908597:C:T	rs3806113	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	42137775	42137776	chr6:42137776:C:T	rs376268344	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	42198048	42198049	chr6:42198049:T:C	rs114119027	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	42313508	42313509	chr6:42313509:A:G	rs485861	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	42338683	42338684	chr6:42338684:C:A	rs260271	C	A	C	Hoxc9_MA0485.1	1	1	-	8.552701183583471	6.469940863006935	CGTCATAAATCCT
chr6	42345882	42345883	chr6:42345883:C:G	rs113123531	C	G	C	Hoxc9_MA0485.1	2	1	+	9.796622776956568	7.100738635235255	ACCTGTAAATCAC
chr6	42356853	42356854	chr6:42356854:G:C	rs140916487	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	42404618	42404619	chr6:42404619:C:A	rs1397175	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	42747735	42747736	chr6:42747736:C:T	rs75651354	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	42864823	42864824	chr6:42864824:T:G	rs144252837	T	G	T	Hoxc9_MA0485.1	5	1	+	8.564436543696802	1.6658935679772056	ACCCATGAATCAT
chr6	43630457	43630458	chr6:43630458:A:G	rs190501343	A	G	a	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	43762017	43762018	chr6:43762018:G:T	rs1109324	G	T	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	43931790	43931791	chr6:43931791:C:T	rs864430	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	44028977	44028978	chr6:44028978:C:G	rs80331336	C	G	c	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	44050418	44050419	chr6:44050419:T:G	rs1884377	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	44105125	44105126	chr6:44105126:G:A	rs7743249	G	A	a	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	44247802	44247803	chr6:44247803:C:T	rs139381738	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	44287721	44287722	chr6:44287722:G:A	rs324146	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	44382075	44382076	chr6:44382076:C:T	rs12527726	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	44576223	44576224	chr6:44576224:T:A	rs184475	T	A	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	44576253	44576254	chr6:44576254:G:C	rs112570749	G	C	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	44576686	44576687	chr6:44576687:C:T	rs6915827	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	44615749	44615750	chr6:44615750:T:C	rs863889	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	44625287	44625288	chr6:44625288:G:T	rs7759605	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	44625447	44625448	chr6:44625448:C:G	rs4090309	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	44630767	44630768	chr6:44630768:C:G	rs111572610	C	G	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	44651758	44651759	chr6:44651759:G:A	rs545249006	G	A	g	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	44709587	44709588	chr6:44709588:C:T	rs227822	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	44709594	44709595	chr6:44709595:G:A	rs227823	G	A	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	44723964	44723965	chr6:44723965:C:T	rs1283948	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	44723965	44723966	chr6:44723966:A:G	rs227843	A	G	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	44743170	44743171	chr6:44743171:C:T	rs67220021	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	44808398	44808399	chr6:44808399:T:G	rs4644056	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	45036795	45036796	chr6:45036796:T:C	rs9369529	T	C	T	Hoxc9_MA0485.1	2	1	+	8.515919203214327	9.89293768037555	GGTAATAAATCCA
chr6	45119175	45119176	chr6:45119176:C:A	rs77629776	C	A	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	45188044	45188045	chr6:45188045:C:A	rs1797145	C	A	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	45251961	45251962	chr6:45251962:T:C	rs10456548	T	C	T	Hoxc9_MA0485.1	1	1	+	9.397541645016137	10.341341484261001	TTCAATAAATCAT
chr6	45453109	45453110	chr6:45453110:C:T	rs2677100	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	45512761	45512762	chr6:45512762:G:C	rs62400365	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	45512778	45512779	chr6:45512779:A:T	rs62400366	A	T	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	45592033	45592034	chr6:45592034:G:A	rs114798795	G	A	.	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	45611166	45611167	chr6:45611167:C:T	rs7760394	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	45666354	45666355	chr6:45666355:A:C	rs9349322	A	C	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	45852667	45852668	chr6:45852668:T:C	rs4714881	T	C	C	Hoxc9_MA0485.1	9	1	+	8.92249259080985	2.0342667764362155	AGTTATAAATTAC
chr6	45949512	45949513	chr6:45949513:T:C	rs141231603	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	46039838	46039839	chr6:46039839:A:C	chr6:46039839:A:C	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	46043110	46043111	chr6:46043111:C:T	rs74960891	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	46046946	46046947	chr6:46046947:A:G	rs16874161	A	G	A	Hoxc9_MA0485.1	12	1	-	10.976223143348367	11.23022009711292	GACAATAAATCAT
chr6	46171094	46171095	chr6:46171095:G:A	rs116032216	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	46171095	46171096	chr6:46171096:G:T	rs111890908	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	46290615	46290616	chr6:46290616:T:C	rs141855408	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	46296831	46296832	chr6:46296832:G:A	rs4714920	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	46735653	46735654	chr6:46735654:A:G	rs41401553	A	G	A	Hoxc9_MA0485.1	5	1	-	7.3503706511861875	2.8650592885477018	GGGAGTAAATCTG
chr6	46893873	46893874	chr6:46893874:G:A	chr6:46893874:G:A	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	46979103	46979104	chr6:46979104:C:T	rs6922176	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	47058196	47058197	chr6:47058197:C:G	rs1226522	C	G	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr6	47058222	47058223	chr6:47058223:C:T	rs1226523	C	T	T	Hoxc9_MA0485.1	1	1	-	9.245694103222428	7.686250529312368	TGTAATAAATCTT
chr6	47147417	47147418	chr6:47147418:C:T	rs12206787	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	47169769	47169770	chr6:47169770:G:A	rs11755212	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	47239809	47239810	chr6:47239810:T:C	rs61574651	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	47299924	47299925	chr6:47299925:A:G	rs933156057	A	G	A	Hoxc9_MA0485.1	9	1	+	7.588312012678523	4.527728766804916	AGCCATAAAACTG
chr6	47343471	47343472	chr6:47343472:A:T	rs9968995	A	T	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	47810000	47810001	chr6:47810001:G:A	rs10485322	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	48135944	48135945	chr6:48135945:G:C	rs553636105	G	C	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	48736299	48736300	chr6:48736300:C:T	rs4316002	C	T	C	Hoxc9_MA0485.1	1	1	-	9.360122547084547	7.800678973174487	AGCAATAAATCCA
chr6	48765914	48765915	chr6:48765915:T:G	rs2490128	T	G	G	Hoxc9_MA0485.1	4	1	-	8.357591127443118	3.2196644461934603	ACACATAAATCTG
chr6	49570023	49570024	chr6:49570024:A:G	rs17663744	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	49967021	49967022	chr6:49967022:T:C	rs9395548	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	50207965	50207966	chr6:50207966:C:T	rs9395563	C	T	t	Hoxc9_MA0485.1	4	1	-	9.69612738864417	10.863891102635753	ACCAGTAAATCAT
chr6	50272579	50272580	chr6:50272580:T:A	rs4143783	T	A	T	Hoxc9_MA0485.1	5	1	+	10.539116850717733	3.6405738749981396	GCCAATAAATCTT
chr6	50903449	50903450	chr6:50903450:A:G	rs72891726	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	51805992	51805993	chr6:51805993:G:A	rs6941078	G	A	g	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	52124921	52124922	chr6:52124922:A:G	rs140657056	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	52328613	52328614	chr6:52328614:A:G	rs115994506	A	G	A	Hoxc9_MA0485.1	5	1	-	9.014363914825388	4.529052552186903	AGACATAAATTAT
chr6	52337879	52337880	chr6:52337880:C:G	rs556713	C	G	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	52340672	52340673	chr6:52340673:C:A	rs12665711	C	A	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	52353518	52353519	chr6:52353519:G:A	rs78544322	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	52736039	52736040	chr6:52736040:C:T	rs4631283	C	T	C	Hoxc9_MA0485.1	10	1	+	8.454357592615036	6.650521688306286	GGCCATCAATCCA
chr6	53062461	53062462	chr6:53062462:T:C	rs117842514	T	C	T	Hoxc9_MA0485.1	12	1	-	9.705911018775591	9.831591375609062	TGACATAAATCAA
chr6	53447396	53447397	chr6:53447397:A:C	rs77001899	A	C	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	53615520	53615521	chr6:53615521:A:G	rs482579	A	G	G	Hoxc9_MA0485.1	11	1	-	8.181514130745942	6.986113661055884	GGCCACAAATCTC
chr6	53758110	53758111	chr6:53758111:A:C	rs4345397	A	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	53809436	53809437	chr6:53809437:G:A	rs9382240	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	53838862	53838863	chr6:53838863:T:A	rs12661475	T	A	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	54031356	54031357	chr6:54031357:A:G	rs1325833	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	54602468	54602469	chr6:54602469:A:G	rs1951694	A	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	54696124	54696125	chr6:54696125:G:A	rs12527077	G	A	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	54718079	54718080	chr6:54718080:T:C	chr6:54718080:T:C	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	54719489	54719490	chr6:54719490:G:A	rs6459019	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	54904084	54904085	chr6:54904085:G:A	rs239834	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	55080290	55080291	chr6:55080291:G:C	rs34005409	G	C	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	55142813	55142814	chr6:55142814:C:T	rs9475166	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr6	55172033	55172034	chr6:55172034:G:A	rs34522972	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	55524552	55524553	chr6:55524553:T:A	rs6936172	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	55557819	55557820	chr6:55557820:C:T	rs3925003	C	T	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	55916255	55916256	chr6:55916256:T:A	rs76830184	T	A	T	Hoxc9_MA0485.1	3	1	+	9.085812333078621	9.239313898530774	GGTTATCAATCAC
chr6	55951437	55951438	chr6:55951438:G:A	rs12189860	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	56144783	56144784	chr6:56144784:A:G	chr6:56144784:A:G	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	56247083	56247084	chr6:56247084:C:T	rs111635956	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	56377289	56377290	chr6:56377290:G:A	rs7775609	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	56695906	56695907	chr6:56695907:C:A	rs116619847	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	57150251	57150252	chr6:57150252:A:G	rs72867059	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	57224909	57224910	chr6:57224910:T:A	rs12173390	T	A	T	Hoxc9_MA0485.1	5	1	+	8.94358661667192	2.0450436409523256	GGACATAAATTTC
chr6	57302902	57302903	chr6:57302903:T:C	rs6459186	T	C	C	Hoxc9_MA0485.1	0	1	+	9.360042740995501	9.127699083476132	TGTTATAAATCAA
chr6	57489878	57489879	chr6:57489879:G:A	rs113298867	G	A	.	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	60371825	60371826	chr6:60371826:G:A	rs4715712	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	61980774	61980775	chr6:61980775:A:G	rs1192426	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	63000053	63000054	chr6:63000054:T:A	rs7750310	T	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	63795271	63795272	chr6:63795272:T:C	rs182424377	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr6	64432049	64432050	chr6:64432050:G:A	rs1338829	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	64850234	64850235	chr6:64850235:C:A	rs9354167	C	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	64881849	64881850	chr6:64881850:C:T	rs2209031	C	T	C	Hoxc9_MA0485.1	12	1	-	7.998783376030302	7.873103019196832	GCCCTTAAATCAG
chr6	64955604	64955605	chr6:64955605:A:G	rs1380125459	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	65706678	65706679	chr6:65706679:T:C	rs116431337	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	65725794	65725795	chr6:65725795:A:T	rs6933916	A	T	A	Hoxc9_MA0485.1	9	1	-	7.814429476336514	3.986786907836488	GGGAGTAAATCTT
chr6	65987763	65987764	chr6:65987764:G:T	chr6:65987764:G:T	G	T	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	66290023	66290024	chr6:66290024:G:T	rs12206488	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	66336370	66336371	chr6:66336371:A:G	rs7750608	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	66676165	66676166	chr6:66676166:T:C	rs1378299	T	C	T	Hoxc9_MA0485.1	7	1	-	10.062456383121337	3.1582273139157575	GACAGTAAATCAC
chr6	66743392	66743393	chr6:66743393:T:G	rs7755703	T	G	T	Hoxc9_MA0485.1	12	1	-	8.192358833092964	9.036094968841313	AGCAGTAAATCCA
chr6	66859802	66859803	chr6:66859803:A:C	rs4631257	A	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	66859814	66859815	chr6:66859815:C:T	rs4502915	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	67091521	67091522	chr6:67091522:T:G	rs2502244	T	G	T	Hoxc9_MA0485.1	7	1	-	9.595317011472867	2.6910879422672904	GTCAATAAATCTT
chr6	67724053	67724054	chr6:67724054:T:A	rs112657998	T	A	T	Hoxc9_MA0485.1	12	1	+	10.622712580383652	10.032973398399855	TGCAATAAATCTT
chr6	67795445	67795446	chr6:67795446:A:T	rs12200076	A	T	A	Hoxc9_MA0485.1	5	1	-	6.6022095866420765	-0.2963333890775189	GGGCATCAATCCC
chr6	68011113	68011114	chr6:68011114:T:C	rs56281061	T	C	T	Hoxc9_MA0485.1	11	1	+	8.323258021444701	7.127857551754644	TGCCATGAATCTT
chr6	68011128	68011129	chr6:68011129:C:T	rs9346112	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	68883474	68883475	chr6:68883475:T:C	rs28594921	T	C	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	68896944	68896945	chr6:68896945:T:C	rs10455223	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	69020106	69020107	chr6:69020107:A:G	rs3757048	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	69059546	69059547	chr6:69059547:G:A	rs72901517	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	69398955	69398956	chr6:69398956:C:T	rs1328729	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	69865801	69865802	chr6:69865802:T:C	rs13208359	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	70348037	70348038	chr6:70348038:C:T	rs1812988	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	70814533	70814534	chr6:70814534:A:C	rs113903241	A	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	71247801	71247802	chr6:71247802:C:A	rs10755550	C	A	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	71477286	71477287	chr6:71477287:T:C	rs852961	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	71513249	71513250	chr6:71513250:A:T	rs73747164	A	T	A	Hoxc9_MA0485.1	6	1	+	9.211926495170193	5.683202029632674	CCCCGTAAATCAG
chr6	71532423	71532424	chr6:71532424:G:A	rs12198962	G	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	73580803	73580804	chr6:73580804:G:A	rs147133286	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	73614969	73614970	chr6:73614970:G:A	rs615052	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	73645228	73645229	chr6:73645229:T:C	rs3799290	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	73807628	73807629	chr6:73807629:G:A	rs4708090	G	A	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	73900027	73900028	chr6:73900028:C:T	rs12215110	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	74187344	74187345	chr6:74187345:A:G	rs1934022	A	G	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	74714116	74714117	chr6:74714117:G:A	rs62437815	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	75397977	75397978	chr6:75397978:T:C	rs145048796	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	75546743	75546744	chr6:75546744:G:C	rs62414230	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	76043594	76043595	chr6:76043595:T:C	rs720155	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	76439073	76439074	chr6:76439074:T:G	rs9341576	T	G	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	76697181	76697182	chr6:76697182:T:A	rs9294019	T	A	T	Hoxc9_MA0485.1	4	1	+	9.121048428706384	12.78966367102298	GGCATTAAATCAC
chr6	77333755	77333756	chr6:77333756:A:G	rs79425885	A	G	A	Hoxc9_MA0485.1	4	1	+	8.507512495004008	7.339748781012424	GCCCATGAATCAA
chr6	77504503	77504504	chr6:77504504:A:T	rs1419086	A	T	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	77546095	77546096	chr6:77546096:T:C	rs1778268	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	77894394	77894395	chr6:77894395:A:T	rs9443485	A	T	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	77929857	77929858	chr6:77929858:T:A	rs2207343	T	A	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	78431277	78431278	chr6:78431278:G:C	rs2223722	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	78511229	78511230	chr6:78511230:G:A	rs77431546	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	78511261	78511262	chr6:78511262:G:A	rs59310741	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	78548768	78548769	chr6:78548769:T:A	rs682852	T	A	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	78607323	78607324	chr6:78607324:G:T	rs147820460	G	T	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	79078931	79078932	chr6:79078932:C:T	rs947995353	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	79426811	79426812	chr6:79426812:A:G	rs80289594	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	79431359	79431360	chr6:79431360:C:T	rs12213051	C	T	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	79469605	79469606	chr6:79469606:C:G	rs2575204	C	G	G	Hoxc9_MA0485.1	1	1	-	8.32637854786725	7.187418066535577	AGTCATGAATCAT
chr6	79603352	79603353	chr6:79603353:A:G	rs115768626	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	79632087	79632088	chr6:79632088:T:A	rs1045076861	T	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	79763451	79763452	chr6:79763452:C:T	rs6936094	C	T	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	79815318	79815319	chr6:79815319:A:C	rs3934650	A	C	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	80129534	80129535	chr6:80129535:G:T	rs2505932	G	T	t	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	80522080	80522081	chr6:80522081:C:G	rs541841	C	G	C	Hoxc9_MA0485.1	11	1	+	7.623028868285209	5.26348532431592	AGCTATCAATCCT
chr6	80941236	80941237	chr6:80941237:C:T	rs572622	C	T	T	Hoxc9_MA0485.1	3	1	+	10.876842838536348	9.988590065513725	GGCCATAAATTAA
chr6	81031739	81031740	chr6:81031740:G:A	rs13220122	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	81241282	81241283	chr6:81241283:G:A	rs10943784	G	A	G	Hoxc9_MA0485.1	1	1	-	8.038723175762486	7.094923336517621	GCACATCAATCAT
chr6	81241287	81241288	chr6:81241288:A:G	rs75563712	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	81475812	81475813	chr6:81475813:T:C	rs6926893	T	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr6	82217060	82217061	chr6:82217061:T:C	rs7743511	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	82410790	82410791	chr6:82410791:C:T	rs12211875	C	T	C	Hoxc9_MA0485.1	3	1	+	8.522930717906014	7.634677944883392	CTTCATAAATCAT
chr6	82494674	82494675	chr6:82494675:G:C	rs6934417	G	C	G	Hoxc9_MA0485.1	6	1	-	9.184132492623139	8.323258021444701	TGCCATCAATCTT
chr6	82521614	82521615	chr6:82521615:C:T	rs35301711	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	82878932	82878933	chr6:82878933:G:A	rs72899630	G	A	A	Hoxc9_MA0485.1	2	1	-	9.359938094164338	7.982919617003117	AGCTGTAAATCTG
chr6	82971059	82971060	chr6:82971060:A:C	rs293483	A	C	A	Hoxc9_MA0485.1	12	1	-	10.330068219043337	9.86600939389301	GTCCATAAATCTT
chr6	83459248	83459249	chr6:83459249:G:A	rs6903322	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	84521840	84521841	chr6:84521841:T:C	rs79343088	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	84582248	84582249	chr6:84582249:C:T	rs12214171	C	T	C	Hoxc9_MA0485.1	0	1	-	8.094163487409098	7.561348354118096	GGCAGTAAATAAA
chr6	84772877	84772878	chr6:84772878:C:T	rs858735	C	T	C	Hoxc9_MA0485.1	2	1	+	11.24691552576851	9.869897048607287	GACCATAAATCAG
chr6	84973686	84973687	chr6:84973687:G:A	rs962054	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	85059100	85059101	chr6:85059101:A:G	rs16875611	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	85650709	85650710	chr6:85650710:A:G	rs9351065	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	85960495	85960496	chr6:85960496:G:A	rs10455455	G	A	g	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	86016871	86016872	chr6:86016872:G:C	rs1337853	G	C	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	86253118	86253119	chr6:86253119:T:C	rs3013792	T	C	C	Hoxc9_MA0485.1	11	1	-	10.290380141185674	5.877846742317305	GCTCATAAATCAG
chr6	86476469	86476470	chr6:86476470:A:T	rs13215026	A	T	A	Hoxc9_MA0485.1	9	1	-	8.362417637762173	4.5347750692621505	GGTTATAAATCCA
chr6	87153757	87153758	chr6:87153758:A:C	rs780134511	A	C	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr6	87203757	87203758	chr6:87203758:G:A	rs4707346	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	87297260	87297261	chr6:87297261:G:C	rs56678817	G	C	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	87578415	87578416	chr6:87578416:C:A	rs4132445	C	A	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	87697399	87697400	chr6:87697400:C:T	rs76854183	C	T	T	Hoxc9_MA0485.1	12	1	+	8.2129552830046	7.9589583292400485	ATGCATAAATCAC
chr6	87704980	87704981	chr6:87704981:A:G	rs9444536	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	87869841	87869842	chr6:87869842:G:A	rs4129674	G	A	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	87889668	87889669	chr6:87889669:G:A	rs72912321	G	A	G	Hoxc9_MA0485.1	10	1	-	8.156037984079262	6.352202079770511	GCATGTAAATCAT
chr6	87889670	87889671	chr6:87889671:T:C	rs4707418	T	C	C	Hoxc9_MA0485.1	8	1	-	8.156037984079262	1.254079473944302	GCATGTAAATCAT
chr6	87920054	87920055	chr6:87920055:C:T	rs6910293	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	88398270	88398271	chr6:88398271:C:T	rs1408699	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr6	88804834	88804835	chr6:88804835:C:T	rs61659651	C	T	C	Hoxc9_MA0485.1	12	1	-	9.69497786099861	9.56929750416514	TGCTGTAAATCAG
chr6	88969394	88969395	chr6:88969395:A:G	rs140776854	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	88969395	88969396	chr6:88969396:C:T	rs9353638	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	89022933	89022934	chr6:89022934:A:G	rs112712739	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	89146997	89146998	chr6:89146998:C:T	rs989454	C	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	89298135	89298136	chr6:89298136:G:A	rs117409649	G	A	G	Hoxc9_MA0485.1	2	1	+	6.769379948634696	7.54586111795225	GGGCGTCAATCAG
chr6	89298137	89298138	chr6:89298138:G:A	rs77482521	G	A	G	Hoxc9_MA0485.1	4	1	+	6.769379948634696	7.937143662626279	GGGCGTCAATCAG
chr6	89456888	89456889	chr6:89456889:A:G	rs58623344	A	G	A	Hoxc9_MA0485.1	12	1	-	9.920858391682614	10.174855345447167	TACAATAAATCAT
chr6	89575266	89575267	chr6:89575267:G:C	rs7744488	G	C	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	90239653	90239654	chr6:90239654:G:A	rs760563601	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	90462308	90462309	chr6:90462309:C:T	rs791043	C	T	T	Hoxc9_MA0485.1	2	1	+	12.256848537731978	10.879830060570756	AGCAATAAATCAC
chr6	90477640	90477641	chr6:90477641:A:G	rs1221631	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	90719957	90719958	chr6:90719958:G:A	rs113554083	G	A	G	Hoxc9_MA0485.1	1	1	+	8.883900560146527	7.324456986236467	GGCTATGAATCAG
chr6	90863228	90863229	chr6:90863229:T:G	rs1145772	T	G	T	Hoxc9_MA0485.1	8	1	-	9.601802682512302	4.751400510567643	GGCCTTAAATCAT
chr6	90899210	90899211	chr6:90899211:T:C	rs1145778	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	90955014	90955015	chr6:90955015:C:T	rs62408492	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	91304799	91304800	chr6:91304800:G:A	rs111323976	G	A	G	Hoxc9_MA0485.1	0	1	+	8.922386354068513	8.38957122077751	GTTTATAAATCAT
chr6	91628983	91628984	chr6:91628984:T:C	rs2208433	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	91962333	91962334	chr6:91962334:T:C	rs79455867	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	92025421	92025422	chr6:92025422:C:T	rs13195705	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	92300010	92300011	chr6:92300011:G:C	rs12525836	G	C	G	Hoxc9_MA0485.1	11	1	-	7.755469574457704	5.395926030488416	GACAGTAAATCCT
chr6	92667906	92667907	chr6:92667907:G:A	rs1418168	G	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	93398394	93398395	chr6:93398395:G:C	rs3799800	G	C	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	93423627	93423628	chr6:93423628:A:G	rs75173887	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	93993297	93993298	chr6:93993298:G:A	rs1872991	G	A	g	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	94456773	94456774	chr6:94456774:T:C	rs9360067	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	94785000	94785001	chr6:94785001:C:T	rs79356849	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	95600506	95600507	chr6:95600507:C:T	rs4486026	C	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	95650353	95650354	chr6:95650354:G:C	rs6935316	G	C	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	96301185	96301186	chr6:96301186:A:G	rs78085201	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	96451239	96451240	chr6:96451240:G:T	rs28623445	G	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	96926457	96926458	chr6:96926458:C:T	rs34169951	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	96926464	96926465	chr6:96926465:C:A	rs34721198	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	97059748	97059749	chr6:97059749:G:A	rs76421537	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	97216835	97216836	chr6:97216836:T:G	rs6929533	T	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	97216853	97216854	chr6:97216854:C:T	rs9374430	C	T	C	Hoxc9_MA0485.1	1	1	-	11.945927535274631	10.38648396136457	GGCAATAAATCAA
chr6	97438601	97438602	chr6:97438602:C:T	rs67506144	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	98590553	98590554	chr6:98590554:G:A	rs12663996	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	98832865	98832866	chr6:98832866:G:C	rs983885924	G	C	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	98832891	98832892	chr6:98832892:C:G	rs114426699	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	99050344	99050345	chr6:99050345:C:T	rs149794385	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	99152336	99152337	chr6:99152337:A:T	rs9373042	A	T	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	99841460	99841461	chr6:99841461:C:T	rs9389752	C	T	c	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	100229036	100229037	chr6:100229037:T:C	rs115605576	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	100257847	100257848	chr6:100257848:T:A	rs9386064	T	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	100493160	100493161	chr6:100493161:A:G	rs9373504	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	100828821	100828822	chr6:100828822:C:G	rs2895068	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	101014046	101014047	chr6:101014047:T:C	rs17801075	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	101020864	101020865	chr6:101020865:C:A	rs1415469	C	A	A	Hoxc9_MA0485.1	2	1	+	9.190899038754305	7.271496066350548	GACTGTAAATCAG
chr6	101204215	101204216	chr6:101204216:G:A	rs6900880	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	101286307	101286308	chr6:101286308:T:C	rs697440	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	101313097	101313098	chr6:101313098:A:G	rs117524874	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	101352523	101352524	chr6:101352524:G:A	rs2518320	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	101513144	101513145	chr6:101513145:C:T	rs6917120	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	101539498	101539499	chr6:101539499:T:G	rs3918497	T	G	T	Hoxc9_MA0485.1	7	1	-	7.685294041361565	0.7810649721559849	GGCAATTAATCTG
chr6	101730168	101730169	chr6:101730169:C:T	rs17062422	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	101909255	101909256	chr6:101909256:A:T	rs9377321	A	T	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	101919564	101919565	chr6:101919565:C:T	rs1417175	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	102474766	102474767	chr6:102474767:A:G	rs601907	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	102944596	102944597	chr6:102944597:A:G	rs13220289	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	103326914	103326915	chr6:103326915:G:A	rs12207319	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	103367453	103367454	chr6:103367454:G:C	rs7755162	G	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	103798115	103798116	chr6:103798116:C:T	rs13197814	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr6	103864874	103864875	chr6:103864875:G:C	rs9322776	G	C	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	104566391	104566392	chr6:104566392:C:T	rs78660494	C	T	c	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	104686690	104686691	chr6:104686691:A:C	rs999117860	A	C	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	104956322	104956323	chr6:104956323:G:A	rs12194974	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	105137556	105137557	chr6:105137557:C:A	rs116741707	C	A	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	105604139	105604140	chr6:105604140:C:T	rs149129803	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	105692845	105692846	chr6:105692846:G:A	rs145168100	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	105837111	105837112	chr6:105837112:G:A	rs1003294364	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	105909123	105909124	chr6:105909124:T:G	rs938338732	T	G	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	106070190	106070191	chr6:106070191:C:A	rs79101873	C	A	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	106450918	106450919	chr6:106450919:C:T	rs2236072	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	106450923	106450924	chr6:106450924:G:A	rs9400006	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	106522045	106522046	chr6:106522046:T:G	rs142608884	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	106534581	106534582	chr6:106534582:G:A	rs72941307	G	A	G	Hoxc9_MA0485.1	12	1	-	9.038414777635918	8.784417823871365	TGGAATAAATCAC
chr6	106534612	106534613	chr6:106534613:T:C	rs1462147	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	106637800	106637801	chr6:106637801:A:C	rs60992370	A	C	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	106799813	106799814	chr6:106799814:T:C	rs3117413	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	106808114	106808115	chr6:106808115:T:C	rs9400066	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	106917885	106917886	chr6:106917886:T:C	rs36165927	T	C	C	Hoxc9_MA0485.1	5	1	+	8.195305659119041	3.7099942964805583	TGTCATAAATCCA
chr6	107607176	107607177	chr6:107607177:G:A	rs9398136	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	107607181	107607182	chr6:107607182:G:A	rs2818256	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr6	107675001	107675002	chr6:107675002:C:T	rs1237365022	C	T	C	Hoxc9_MA0485.1	1	1	-	10.295715603581138	8.736272029671078	AGGCATAAATCAC
chr6	107787255	107787256	chr6:107787256:A:G	rs558686485	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	108771559	108771560	chr6:108771560:A:G	rs59631236	A	G	a	Hoxc9_MA0485.1	4	1	+	8.491882927287962	7.324119213296378	TGCCATCAATTAC
chr6	108794143	108794144	chr6:108794144:A:C	rs472656	A	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	109045536	109045537	chr6:109045537:G:A	rs76249006	G	A	G	Hoxc9_MA0485.1	4	1	+	7.917158588727192	9.084922302718777	CACAGTAAATCTC
chr6	109300251	109300252	chr6:109300252:A:G	rs114018388	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	109396214	109396215	chr6:109396215:T:C	rs369371230	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	109432967	109432968	chr6:109432968:G:A	rs9480958	G	A	A	Hoxc9_MA0485.1	1	1	+	12.103346972279823	10.543903398369764	AGCTATAAATCAC
chr6	109927236	109927237	chr6:109927237:G:A	rs140821575	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	110296505	110296506	chr6:110296506:G:A	rs2334324	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	110515002	110515003	chr6:110515003:C:T	rs140444721	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	110515027	110515028	chr6:110515028:C:T	rs76919779	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	110568128	110568129	chr6:110568129:T:A	rs12665517	T	A	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	110688265	110688266	chr6:110688266:G:C	rs74735001	G	C	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	110864646	110864647	chr6:110864647:G:A	rs1150107	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	110874667	110874668	chr6:110874668:C:T	rs541484044	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	110981428	110981429	chr6:110981429:C:T	rs34994540	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	111600537	111600538	chr6:111600538:G:A	rs112054083	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	111673857	111673858	chr6:111673858:T:C	rs72940246	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	111737359	111737360	chr6:111737360:T:C	chr6:111737360:T:C	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	111818802	111818803	chr6:111818803:A:G	rs9387041	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr6	111872094	111872095	chr6:111872095:G:C	rs9387048	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	111872111	111872112	chr6:111872112:G:T	rs72944245	G	T	G	Hoxc9_MA0485.1	1	1	-	10.362994780506186	9.9425116879278	CCCAATAAATCAC
chr6	111872132	111872133	chr6:111872133:G:A	rs62413757	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	112066709	112066710	chr6:112066710:G:A	rs80255819	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	112204708	112204709	chr6:112204709:G:A	rs3777927	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	112205130	112205131	chr6:112205131:C:A	rs59596549	C	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	112482522	112482523	chr6:112482523:A:G	rs915622200	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	112506604	112506605	chr6:112506605:G:A	rs76320943	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	112558051	112558052	chr6:112558052:A:C	rs79311907	A	C	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	112620740	112620741	chr6:112620741:T:C	rs9372333	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	113123366	113123367	chr6:113123367:T:C	rs2473981	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	113192371	113192372	chr6:113192372:C:T	rs9488099	C	T	C	Hoxc9_MA0485.1	2	1	+	9.565676556524691	8.188658079363469	CACCATAAATCTT
chr6	113360957	113360958	chr6:113360958:A:C	rs9398341	A	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	113461638	113461639	chr6:113461639:A:G	rs9481369	A	G	G	Hoxc9_MA0485.1	6	1	+	10.543903398369764	7.509697631860342	AACTATAAATCAC
chr6	113623429	113623430	chr6:113623430:G:A	rs9398357	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	113662223	113662224	chr6:113662224:C:G	rs13190855	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	113662239	113662240	chr6:113662240:G:A	rs67969467	G	A	G	Hoxc9_MA0485.1	0	1	+	8.840575432723302	8.3077602994323	GGCTATAAATATT
chr6	113881643	113881644	chr6:113881644:C:T	rs11153452	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	114013344	114013345	chr6:114013345:T:C	rs7767184	T	C	t	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	114407778	114407779	chr6:114407779:G:A	rs13196200	G	A	G	Hoxc9_MA0485.1	11	1	-	7.52466996976718	8.720070439457237	AGGCATAAATCCG
chr6	114513017	114513018	chr6:114513018:A:T	rs10456893	A	T	A	Hoxc9_MA0485.1	1	1	+	9.700167262621415	9.176850515954937	AACTATAAATCAA
chr6	114874345	114874346	chr6:114874346:T:C	rs7757220	T	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	115241093	115241094	chr6:115241094:C:G	rs2818184	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	115456827	115456828	chr6:115456828:C:T	rs9387334	C	T	C	Hoxc9_MA0485.1	1	1	-	8.563273889955592	7.0038303160455335	GGAAATAAATCCT
chr6	115959192	115959193	chr6:115959193:C:T	rs12203739	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr6	115999519	115999520	chr6:115999520:C:T	rs3798229	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	116533202	116533203	chr6:116533203:T:C	rs6928392	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	116907177	116907178	chr6:116907178:T:G	rs11756449	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	117023000	117023001	chr6:117023001:T:G	rs13196452	T	G	T	Hoxc9_MA0485.1	11	1	+	8.111056432248985	4.556112418589638	AGCAATGAATCTT
chr6	117776538	117776539	chr6:117776539:G:A	rs552224387	G	A	A	Hoxc9_MA0485.1	4	1	+	8.374789956611226	9.542553670602809	TTCCGTAAATCAA
chr6	118554521	118554522	chr6:118554522:T:C	rs12153955	T	C	T	Hoxc9_MA0485.1	4	1	-	9.65153859878069	8.483774884789105	TTCAATAAATCAC
chr6	118589618	118589619	chr6:118589619:C:G	rs12191529	C	G	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	118933837	118933838	chr6:118933838:A:G	rs9387610	A	G	g	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	118968669	118968670	chr6:118968670:C:A	rs1407204	C	A	C	Hoxc9_MA0485.1	0	1	-	8.953049741882113	7.89768499021636	GTTCATAAATCTT
chr6	118968676	118968677	chr6:118968677:C:G	rs144285541	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	119040887	119040888	chr6:119040888:G:A	rs115067554	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	119129191	119129192	chr6:119129192:C:T	rs706980	C	T	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	119274379	119274380	chr6:119274380:T:C	rs17514279	T	C	T	Hoxc9_MA0485.1	8	1	-	8.139346685151597	1.2373881750166393	GCTCGTAAATCTA
chr6	119308458	119308459	chr6:119308459:C:G	rs195093	C	G	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	119314934	119314935	chr6:119314935:G:A	rs11153811	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	119314943	119314944	chr6:119314944:T:A	rs186435923	T	A	T	Hoxc9_MA0485.1	12	1	-	8.684964285393786	9.274703467377583	TTCCATAAATCTA
chr6	119546683	119546684	chr6:119546684:T:C	rs8180610	T	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	119806765	119806766	chr6:119806766:T:C	rs17240135	T	C	T	Hoxc9_MA0485.1	0	1	+	10.312538251601092	10.080194594081725	TGCAGTAAATCAT
chr6	120556211	120556212	chr6:120556212:C:G	rs9398581	C	G	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	121414056	121414057	chr6:121414057:G:C	rs17083560	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	122200388	122200389	chr6:122200389:G:T	rs1379091	G	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	122710138	122710139	chr6:122710139:T:G	rs1049172484	T	G	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	122800326	122800327	chr6:122800327:A:G	rs13216278	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	123161896	123161897	chr6:123161897:G:A	rs4896709	G	A	g	Hoxc9_MA0485.1	4	1	+	9.301944348087234	10.469708062078817	AGCCGTAAATTAG
chr6	123177002	123177003	chr6:123177003:T:A	rs13203531	T	A	T	Hoxc9_MA0485.1	1	1	-	9.327512553364755	8.804195806698278	GAACATAAATCAG
chr6	123177005	123177006	chr6:123177006:G:A	rs13218088	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	123393618	123393619	chr6:123393619:C:T	rs41284430	C	T	C	Hoxc9_MA0485.1	1	1	-	8.429205969231953	6.869762395321891	AGCAATAAAACAC
chr6	123771289	123771290	chr6:123771290:A:C	rs569071731	A	C	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	123886949	123886950	chr6:123886950:T:C	rs1352679	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	123917054	123917055	chr6:123917055:C:T	rs584050	C	T	c	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	124371820	124371821	chr6:124371821:C:T	rs11751246	C	T	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	124558226	124558227	chr6:124558227:A:G	rs530822	A	G	A	Hoxc9_MA0485.1	12	1	-	9.679239337802468	9.93323629156702	ACACATAAATCAT
chr6	124753302	124753303	chr6:124753303:A:C	rs12661994	A	C	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	124868686	124868687	chr6:124868687:T:C	rs60980833	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	124873212	124873213	chr6:124873213:G:A	rs115561495	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	124933862	124933863	chr6:124933863:A:G	rs2875743	A	G	A	Hoxc9_MA0485.1	1	1	+	8.018216250756199	9.57765982466626	AAGCATAAATCAG
chr6	125985866	125985867	chr6:125985867:G:A	rs2326215	G	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr6	126145458	126145459	chr6:126145459:A:T	rs4363059	A	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	127103696	127103697	chr6:127103697:T:C	rs1936793	T	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	127303105	127303106	chr6:127303106:T:C	rs184427755	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	127428510	127428511	chr6:127428511:C:G	rs7771391	C	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	127477836	127477837	chr6:127477837:G:A	rs548251456	G	A	G	Hoxc9_MA0485.1	12	1	-	8.472295488076197	8.218298534311645	GTTAATAAATCTC
chr6	127618965	127618966	chr6:127618966:G:A	rs80185985	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	128001985	128001986	chr6:128001986:T:C	rs118191185	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	128478804	128478805	chr6:128478805:A:G	rs17055907	A	G	a	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	128807733	128807734	chr6:128807734:G:C	rs963856829	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	129184686	129184687	chr6:129184687:T:C	rs9492262	T	C	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	129235534	129235535	chr6:129235535:T:C	rs77870407	T	C	T	Hoxc9_MA0485.1	8	1	-	8.268505577242417	1.3665470671074555	TCCTATCAATCAC
chr6	129499234	129499235	chr6:129499235:A:G	rs577945290	A	G	A	Hoxc9_MA0485.1	11	1	-	7.977515239560547	6.782114769870489	GCTCATCAATCTC
chr6	130261846	130261847	chr6:130261847:T:C	rs7756111	T	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	131172268	131172269	chr6:131172269:C:T	rs10499182	C	T	c	Hoxc9_MA0485.1	10	1	+	8.71722826026232	6.91339235595357	AGGAATAAATCAA
chr6	131251879	131251880	chr6:131251880:A:G	rs920548890	A	G	A	Hoxc9_MA0485.1	5	1	-	8.944488130231997	4.459176767593513	ACAAATAAATCAT
chr6	131390612	131390613	chr6:131390613:C:T	rs2024600	C	T	C	Hoxc9_MA0485.1	6	1	+	7.954907086174223	6.599513915967688	GGCAATCAATTTC
chr6	131398275	131398276	chr6:131398276:C:T	rs17060229	C	T	T	Hoxc9_MA0485.1	12	1	+	10.49020911208403	10.236212158319477	GGCCATGAATCAC
chr6	131547731	131547732	chr6:131547732:G:A	rs2781647	G	A	G	Hoxc9_MA0485.1	1	1	+	7.825482225737683	6.266038651827622	CGTCATGAATCAC
chr6	131816233	131816234	chr6:131816234:C:G	rs73780760	C	G	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	131937504	131937505	chr6:131937505:G:A	rs146183387	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	132053814	132053815	chr6:132053815:A:G	rs191234828	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	132062812	132062813	chr6:132062813:G:A	rs9373010	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	132320194	132320195	chr6:132320195:T:C	rs611273	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	132524837	132524838	chr6:132524838:T:C	rs1001860	T	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr6	132815534	132815535	chr6:132815535:A:G	rs534413117	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	133008359	133008360	chr6:133008360:T:A	rs10457599	T	A	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	133158225	133158226	chr6:133158226:T:C	rs77562673	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	133193591	133193592	chr6:133193592:T:C	rs73773575	T	C	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	133343298	133343299	chr6:133343299:T:A	rs2765783	T	A	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	133407619	133407620	chr6:133407620:G:A	rs211621	G	A	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	133568963	133568964	chr6:133568964:A:T	rs78311371	A	T	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	133568988	133568989	chr6:133568989:T:C	rs80286568	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr6	133637286	133637287	chr6:133637287:T:G	rs17223096	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	133752075	133752076	chr6:133752076:A:G	rs2207405	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	134138850	134138851	chr6:134138851:G:A	rs6911836	G	A	G	Hoxc9_MA0485.1	3	1	-	9.099804593584006	8.21155182056138	AGCCATGAATCTC
chr6	134352991	134352992	chr6:134352992:A:C	rs727981	A	C	C	Hoxc9_MA0485.1	2	1	-	9.373324135503141	8.054458470943056	GGTTGTAAATCAG
chr6	134423171	134423172	chr6:134423172:T:C	rs184324315	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	134447458	134447459	chr6:134447459:A:G	rs13192830	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr6	134453082	134453083	chr6:134453083:C:T	rs4266506	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	134453084	134453085	chr6:134453085:G:T	rs4467792	G	T	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	134453125	134453126	chr6:134453126:A:G	rs1281494063	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr6	134633232	134633233	chr6:134633233:G:A	rs112309419	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	134664848	134664849	chr6:134664849:C:A	rs56851789	C	A	C	Hoxc9_MA0485.1	1	1	-	8.609197735604738	6.526437415028199	TGCTGTAAATTAC
chr6	134735910	134735911	chr6:134735911:C:A	rs6569969	C	A	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	134823068	134823069	chr6:134823069:G:A	rs79128687	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	134823078	134823079	chr6:134823079:G:A	rs1435819160	G	A	g	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	134823095	134823096	chr6:134823096:C:T	rs563590799	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	135113470	135113471	chr6:135113471:C:A	rs9483787	C	A	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	135224321	135224322	chr6:135224322:T:G	rs9321496	T	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	135248986	135248987	chr6:135248987:A:G	rs6917393	A	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	135772117	135772118	chr6:135772118:A:G	rs7766804	A	G	a	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	136103345	136103346	chr6:136103346:A:T	rs118108700	A	T	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	136288425	136288426	chr6:136288426:G:A	rs139275316	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	136288465	136288466	chr6:136288466:T:C	rs114765857	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	136290601	136290602	chr6:136290602:G:A	rs959782535	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr6	136290612	136290613	chr6:136290613:C:T	chr6:136290613:C:T	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	136615200	136615201	chr6:136615201:T:C	rs77415843	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	136680153	136680154	chr6:136680154:T:C	rs546336682	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	136696382	136696383	chr6:136696383:G:A	rs757153765	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	136719501	136719502	chr6:136719502:C:G	rs117385955	C	G	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	136728694	136728695	chr6:136728695:A:T	rs9376226	A	T	T	Hoxc9_MA0485.1	6	1	+	9.25875624522408	5.730031779686562	AAACATAAATCAT
chr6	136760348	136760349	chr6:136760349:T:G	rs368342687	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	137088106	137088107	chr6:137088107:T:C	rs112431630	T	C	T	Hoxc9_MA0485.1	5	1	+	10.835087869975842	6.349776507337357	AGCAGTAAATCAT
chr6	137096150	137096151	chr6:137096151:A:G	rs7760396	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	137180776	137180777	chr6:137180777:G:T	rs6570138	G	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	137305788	137305789	chr6:137305789:C:T	rs12210503	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	137342324	137342325	chr6:137342325:T:C	rs74316837	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	137390462	137390463	chr6:137390463:C:T	rs62420992	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr6	137409457	137409458	chr6:137409458:T:C	rs74541524	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	137415948	137415949	chr6:137415949:G:A	rs145257936	G	A	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	138104645	138104646	chr6:138104646:C:T	rs9484114	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	138509428	138509429	chr6:138509429:T:C	rs6922771	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	138592928	138592929	chr6:138592929:C:T	rs76982498	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	138797006	138797007	chr6:138797007:G:A	rs6570283	G	A	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	138971520	138971521	chr6:138971521:A:T	rs11963818	A	T	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	138971545	138971546	chr6:138971546:A:G	rs9376390	A	G	A	Hoxc9_MA0485.1	8	1	+	9.592870331618004	2.6909118214830454	GCCAATAAATTAT
chr6	139051663	139051664	chr6:139051664:C:G	rs4386829	C	G	C	Hoxc9_MA0485.1	2	1	+	8.579066346434079	5.883182204712768	AGCCATAAATCGC
chr6	139240466	139240467	chr6:139240467:G:C	rs57130404	G	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	139374254	139374255	chr6:139374255:G:A	rs77653058	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	139646109	139646110	chr6:139646110:T:C	rs17069144	T	C	T	Hoxc9_MA0485.1	5	1	+	8.851006566652606	4.36569520401412	ATCCATAAATTAT
chr6	139974523	139974524	chr6:139974524:A:G	rs17811661	A	G	A	Hoxc9_MA0485.1	4	1	+	7.891304785524704	6.723541071533119	GTTCATCAATCAC
chr6	140053224	140053225	chr6:140053225:A:G	rs9403139	A	G	A	Hoxc9_MA0485.1	0	1	+	8.82171858343077	9.354533716721772	ACCCATCAATCTC
chr6	140237942	140237943	chr6:140237943:A:G	rs11752991	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	140286601	140286602	chr6:140286602:T:A	rs675432	T	A	T	Hoxc9_MA0485.1	0	1	+	9.034198791693168	9.55674841006792	TGTCATAAATTAT
chr6	140633073	140633074	chr6:140633074:A:T	rs4301319	A	T	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	141541665	141541666	chr6:141541666:T:G	rs1391907969	T	G	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	142112602	142112603	chr6:142112603:G:A	rs754942611	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	142252094	142252095	chr6:142252095:T:C	rs141815962	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	142265440	142265441	chr6:142265441:G:A	rs1931989	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	142361991	142361992	chr6:142361992:T:C	rs9496352	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	142384925	142384926	chr6:142384926:C:T	rs12197866	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	142684060	142684061	chr6:142684061:A:T	rs58294323	A	T	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	142708736	142708737	chr6:142708737:T:C	rs12530022	T	C	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	142735418	142735419	chr6:142735419:T:C	rs9390022	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	142822815	142822816	chr6:142822816:T:A	rs1007527377	T	A	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	142867464	142867465	chr6:142867465:C:T	rs561519912	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	142867495	142867496	chr6:142867496:T:C	rs150728058	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	143079530	143079531	chr6:143079531:A:G	rs9386021	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	143271248	143271249	chr6:143271249:A:G	rs1570350	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	143405935	143405936	chr6:143405936:C:T	rs143156478	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	143441608	143441609	chr6:143441609:C:T	rs72988635	C	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	143477010	143477011	chr6:143477011:A:G	rs4895615	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr6	143688832	143688833	chr6:143688833:A:G	rs7742129	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	144034536	144034537	chr6:144034537:C:T	rs6930429	C	T	T	Hoxc9_MA0485.1	10	1	+	9.397541645016137	7.593705740707386	TTCAATAAATCAT
chr6	144287323	144287324	chr6:144287324:G:A	rs557487493	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr6	144317873	144317874	chr6:144317874:T:A	rs13209980	T	A	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	144377442	144377443	chr6:144377443:T:A	rs74613567	T	A	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	144601328	144601329	chr6:144601329:C:T	rs9390174	C	T	C	Hoxc9_MA0485.1	1	1	-	7.8008821034664235	6.241438529556361	AGCAGTGAATCAT
chr6	144823244	144823245	chr6:144823245:C:A	rs7744222	C	A	A	Hoxc9_MA0485.1	12	1	-	8.488990916731787	8.953049741882113	GTTCATAAATCTG
chr6	144823601	144823602	chr6:144823602:G:A	rs9399506	G	A	G	Hoxc9_MA0485.1	0	1	-	9.044756133177573	9.27709979069694	CCCCATAAATCCC
chr6	144907926	144907927	chr6:144907927:T:C	rs4896763	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	144953031	144953032	chr6:144953032:G:A	rs9386093	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	145271250	145271251	chr6:145271251:G:A	rs505814	G	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	145736918	145736919	chr6:145736919:G:C	chr6:145736919:G:C	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	146200503	146200504	chr6:146200504:C:T	rs184477022	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	146338921	146338922	chr6:146338922:A:G	rs362831	A	G	a	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	146354773	146354774	chr6:146354774:A:T	rs362881	A	T	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	146361625	146361626	chr6:146361626:A:G	rs2268663	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	146857478	146857479	chr6:146857479:G:T	rs575262562	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	146888089	146888090	chr6:146888090:T:G	rs9390437	T	G	G	Hoxc9_MA0485.1	5	1	+	8.094830047877323	1.1962870721577268	GCTTGTAAATCTC
chr6	146950447	146950448	chr6:146950448:A:C	chr6:146950448:A:C	A	C	A	Hoxc9_MA0485.1	11	1	+	8.010612704545085	5.957622849646005	AGATATCAATCAC
chr6	147141921	147141922	chr6:147141922:T:A	rs188691141	T	A	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	147283655	147283656	chr6:147283656:C:T	rs9485158	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	147283818	147283819	chr6:147283819:C:T	chr6:147283819:C:T	C	T	C	Hoxc9_MA0485.1	2	1	+	10.980099895562516	9.603081418401292	AGCCGTAAATCAA
chr6	147283842	147283843	chr6:147283843:T:A	rs182950886	T	A	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	147390798	147390799	chr6:147390799:T:C	rs187014410	T	C	T	Hoxc9_MA0485.1	11	1	-	7.982037373932928	3.56950397506456	TGCAATGAATCAG
chr6	147436421	147436422	chr6:147436422:G:T	rs566729	G	T	T	Hoxc9_MA0485.1	2	1	-	8.830925348954224	6.911522376550469	CACAATAAATCTT
chr6	147528904	147528905	chr6:147528905:T:C	rs77628336	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	147566432	147566433	chr6:147566433:C:T	rs702347	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	147665579	147665580	chr6:147665580:T:C	rs9386189	T	C	T	Hoxc9_MA0485.1	6	1	-	9.184129264607563	6.149923498098143	AGGCATAAATCTT
chr6	147677085	147677086	chr6:147677086:C:T	rs11757812	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	147840169	147840170	chr6:147840170:T:G	rs4896943	T	G	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	147884283	147884284	chr6:147884284:T:C	rs508902	T	C	T	Hoxc9_MA0485.1	8	1	-	7.977515239560547	1.0755567294255874	GCTCATCAATCTC
chr6	147983950	147983951	chr6:147983951:A:G	rs34972738	A	G	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr6	148128210	148128211	chr6:148128211:C:G	rs182477264	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	148145334	148145335	chr6:148145335:T:C	rs6933417	T	C	T	Hoxc9_MA0485.1	8	1	-	9.766589697938734	2.864631187803775	ATCTATAAATCAT
chr6	148249898	148249899	chr6:148249899:T:C	rs17078227	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	148274959	148274960	chr6:148274960:C:G	rs17078240	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	148475350	148475351	chr6:148475351:G:A	rs1737668	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	148793889	148793890	chr6:148793890:A:G	rs11155594	A	G	A	Hoxc9_MA0485.1	5	1	-	8.42458712693758	3.9392757642990945	GTCCATCAATCAA
chr6	148868715	148868716	chr6:148868716:C:G	rs151011529	C	G	C	Hoxc9_MA0485.1	0	1	-	8.18095869681504	6.893250287629919	GGGCATAAATTAA
chr6	148907855	148907856	chr6:148907856:T:C	rs6570908	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr6	149076220	149076221	chr6:149076221:A:G	rs147943299	A	G	A	Hoxc9_MA0485.1	8	1	+	9.676018723184288	2.7740602130493293	AGCTATCAATCAT
chr6	149082979	149082980	chr6:149082980:A:C	rs115454665	A	C	A	Hoxc9_MA0485.1	12	1	-	8.735280946408981	8.271222121258655	GCCAATAAATTTT
chr6	149161271	149161272	chr6:149161272:T:C	rs56222993	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	149161273	149161274	chr6:149161274:G:A	rs12212622	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	149161305	149161306	chr6:149161306:A:G	rs9498236	A	G	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	149194977	149194978	chr6:149194978:C:T	rs12200399	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	149455749	149455750	chr6:149455750:T:A	rs421037	T	A	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	149705059	149705060	chr6:149705060:T:C	rs6913486	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	149960481	149960482	chr6:149960482:A:G	rs17079127	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	149962005	149962006	chr6:149962006:C:T	rs76949074	C	T	C	Hoxc9_MA0485.1	10	1	+	7.930027067889626	6.126191163580875	ACCCTTAAATCAT
chr6	149962026	149962027	chr6:149962027:C:T	rs10499261	C	T	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr6	149989212	149989213	chr6:149989213:C:A	rs9384010	C	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr6	150009034	150009035	chr6:150009035:G:A	rs632875	G	A	N	Hoxc9_MA0485.1	23	0	-	0	0	.
chr6	150038743	150038744	chr6:150038744:C:G	rs9371657	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	150041835	150041836	chr6:150041836:A:C	rs115430073	A	C	A	Hoxc9_MA0485.1	11	1	+	7.555430479903779	5.502440625004699	AGTCGTCAATCAG
chr6	150058732	150058733	chr6:150058733:C:T	rs56660383	C	T	C	Hoxc9_MA0485.1	4	1	-	8.344989484997047	9.512753198988632	AAACGTAAATCAC
chr6	150072753	150072754	chr6:150072754:T:C	rs550193	T	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	150196185	150196186	chr6:150196186:G:T	rs146585515	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr6	150274001	150274002	chr6:150274002:A:C	chr6:150274002:A:C	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr6	150355365	150355366	chr6:150355366:C:T	rs623742	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	150373687	150373688	chr6:150373688:C:G	rs116711825	C	G	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	150453248	150453249	chr6:150453249:A:G	rs1033446	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	150456704	150456705	chr6:150456705:A:C	chr6:150456705:A:C	A	C	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr6	150515466	150515467	chr6:150515467:T:C	rs10499263	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	150572942	150572943	chr6:150572943:G:A	rs12525679	G	A	G	Hoxc9_MA0485.1	10	1	-	8.995612234742675	7.191776330433922	GATAATAAATCTC
chr6	150576095	150576096	chr6:150576096:T:C	rs9322267	T	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr6	150582334	150582335	chr6:150582335:G:A	rs143728340	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	150806936	150806937	chr6:150806937:T:C	rs76521446	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	150806968	150806969	chr6:150806969:C:G	rs6924094	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	150857919	150857920	chr6:150857920:G:A	rs377441820	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	150902767	150902768	chr6:150902768:G:A	rs175869	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	150907755	150907756	chr6:150907756:G:A	rs9397029	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	150941068	150941069	chr6:150941069:C:A	rs74579419	C	A	C	Hoxc9_MA0485.1	10	1	+	8.565493210766574	5.881492876892623	CATAATAAATCAC
chr6	150969320	150969321	chr6:150969321:T:G	rs803513	T	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr6	151001898	151001899	chr6:151001899:A:G	rs117790084	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	151045218	151045219	chr6:151045219:G:A	rs74752198	G	A	G	Hoxc9_MA0485.1	2	1	-	11.499061779392843	10.122043302231619	GGCCGTAAATCTC
chr6	151100707	151100708	chr6:151100708:T:C	rs11753701	T	C	c	Hoxc9_MA0485.1	5	1	+	8.643871565539985	4.1585602029015005	GGCAATGAATCTT
chr6	151122282	151122283	chr6:151122283:T:A	rs56094157	T	A	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	151140829	151140830	chr6:151140830:C:T	rs12660147	C	T	C	Hoxc9_MA0485.1	1	1	-	8.71722826026232	7.157784686352259	AGGAATAAATCAA
chr6	151166633	151166634	chr6:151166634:T:G	rs143918934	T	G	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	151273428	151273429	chr6:151273429:A:G	rs2257102	A	G	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	151299289	151299290	chr6:151299290:C:A	rs11155782	C	A	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	151413427	151413428	chr6:151413428:T:C	rs6937971	T	C	C	Hoxc9_MA0485.1	4	1	-	8.575854304853024	7.408090590861442	CCCCATAAATTAG
chr6	151706819	151706820	chr6:151706820:T:C	rs851980	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	152063664	152063665	chr6:152063665:T:C	rs3798571	T	C	C	Hoxc9_MA0485.1	11	1	-	9.77215333316915	5.359619934300782	GGCCATGAATCAG
chr6	152117162	152117163	chr6:152117163:C:T	rs73625123	C	T	C	Hoxc9_MA0485.1	2	1	+	7.743632922057486	6.366614444896262	ACCTGTAAATCCC
chr6	152142609	152142610	chr6:152142610:G:C	rs11155834	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	152170925	152170926	chr6:152170926:T:C	rs6905193	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	152174250	152174251	chr6:152174251:T:C	rs2813500	T	C	T	Hoxc9_MA0485.1	7	1	-	8.561757253196852	1.6575281839912743	AGCTATAAATATC
chr6	152245552	152245553	chr6:152245553:T:C	rs17082383	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	152334194	152334195	chr6:152334195:C:T	rs2130262	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	152389866	152389867	chr6:152389867:T:C	rs214942	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	152648574	152648575	chr6:152648575:C:T	rs2258722	C	T	t	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	152663225	152663226	chr6:152663226:G:C	rs1322510	G	C	G	Hoxc9_MA0485.1	10	1	-	8.761505289282471	3.960434481535195	GGCTATCAATCTA
chr6	152701538	152701539	chr6:152701539:T:C	rs2038616	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr6	152949768	152949769	chr6:152949769:G:A	rs12212131	G	A	G	Hoxc9_MA0485.1	3	1	-	8.808197962372391	7.919945189349771	TCCCATAAATTAG
chr6	153425187	153425188	chr6:153425188:G:A	rs539006443	G	A	g	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	153534029	153534030	chr6:153534030:T:G	rs9371705	T	G	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	153790253	153790254	chr6:153790254:A:G	rs9397655	A	G	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	153791127	153791128	chr6:153791128:T:G	rs1892356	T	G	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	153856340	153856341	chr6:153856341:T:C	rs6557319	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	154480018	154480019	chr6:154480019:T:C	rs530729004	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr6	154684062	154684063	chr6:154684063:C:T	rs73790898	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	155174797	155174798	chr6:155174798:A:G	rs575039382	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	155259133	155259134	chr6:155259134:T:C	rs6929157	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr6	155261080	155261081	chr6:155261081:T:G	rs4870366	T	G	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr6	155273502	155273503	chr6:155273503:C:T	rs9397797	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr6	155292771	155292772	chr6:155292772:A:G	rs4869851	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	155327360	155327361	chr6:155327361:G:A	rs9478638	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	155694228	155694229	chr6:155694229:G:A	rs9397835	G	A	G	Hoxc9_MA0485.1	0	1	-	8.320753630463877	8.553097287983245	CCACATAAATCTC
chr6	155850713	155850714	chr6:155850714:T:G	rs11759141	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr6	155934281	155934282	chr6:155934282:T:C	rs7740419	T	C	t	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	155993989	155993990	chr6:155993990:T:C	rs76339933	T	C	T	Hoxc9_MA0485.1	5	1	+	10.7263284951186	6.241017132480114	AGTTATAAATCAC
chr6	156016381	156016382	chr6:156016382:C:G	rs6925014	C	G	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	156026637	156026638	chr6:156026638:C:G	rs145163317	C	G	C	Hoxc9_MA0485.1	2	1	+	8.797368478695608	6.1014843369742975	GACTGTAAATCTT
chr6	156065845	156065846	chr6:156065846:G:T	rs6557469	G	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	156193405	156193406	chr6:156193406:C:T	rs11156089	C	T	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	156279181	156279182	chr6:156279182:G:C	rs6937546	G	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr6	156379681	156379682	chr6:156379682:G:A	rs2819083	G	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr6	157143466	157143467	chr6:157143467:T:G	rs12214931	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr6	157424785	157424786	chr6:157424786:C:T	rs149087749	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	157491425	157491426	chr6:157491426:G:T	rs139768627	G	T	G	Hoxc9_MA0485.1	1	1	+	8.673463454080172	6.590703133503634	TGCCATAAATATT
chr6	157632551	157632552	chr6:157632552:A:C	rs62423255	A	C	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	157637512	157637513	chr6:157637513:C:T	rs618823	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	157651213	157651214	chr6:157651214:T:C	rs73791283	T	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr6	157707006	157707007	chr6:157707007:A:G	rs658195	A	G	a	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	157707007	157707008	chr6:157707008:A:T	rs658196	A	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	158289990	158289991	chr6:158289991:A:G	rs827864	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	158300749	158300750	chr6:158300750:A:G	rs112566257	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	158300780	158300781	chr6:158300781:G:A	rs1832872	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr6	158388970	158388971	chr6:158388971:G:C	rs705933	G	C	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr6	158506618	158506619	chr6:158506619:A:G	rs3828712	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	158646464	158646465	chr6:158646465:C:T	rs528568588	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr6	158707739	158707740	chr6:158707740:G:T	rs7758665	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	158752589	158752590	chr6:158752590:G:A	rs117007920	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr6	158812157	158812158	chr6:158812158:G:A	rs3102965	G	A	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	159177598	159177599	chr6:159177599:C:T	rs211578	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr6	159181531	159181532	chr6:159181532:A:G	rs74755928	A	G	A	Hoxc9_MA0485.1	11	1	+	8.72334407084617	4.310810671977801	GGCCATAAATGAC
chr6	159726408	159726409	chr6:159726409:A:G	rs1853259	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr6	159726411	159726412	chr6:159726412:T:C	rs150082296	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	159726435	159726436	chr6:159726436:C:T	chr6:159726436:C:T	C	T	C	Hoxc9_MA0485.1	10	1	+	8.985976303344962	7.18214039903621	CCTAATAAATCAC
chr6	159852888	159852889	chr6:159852889:G:A	rs73586404	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr6	159961483	159961484	chr6:159961484:T:C	rs4709387	T	C	T	Hoxc9_MA0485.1	3	1	+	7.221083303682735	8.109336076705357	TCCTGTAAATCCC
chr6	159969885	159969886	chr6:159969886:G:C	rs76232680	G	C	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr6	159969897	159969898	chr6:159969898:G:T	rs1169244331	G	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	159969898	159969899	chr6:159969899:C:A	rs116227660	C	A	C	Hoxc9_MA0485.1	12	1	-	7.978873624373365	8.44293244952369	GGAAATCAATCAG
chr6	160201675	160201676	chr6:160201676:A:G	rs476064	A	G	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr6	160248707	160248708	chr6:160248708:C:T	rs762102569	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	160254871	160254872	chr6:160254872:T:G	rs946704956	T	G	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr6	160385102	160385103	chr6:160385103:T:C	rs4235926	T	C	T	Hoxc9_MA0485.1	8	1	-	8.474127118429909	1.5721686082949495	AGCAATTAATCAT
chr6	160883209	160883210	chr6:160883210:A:T	rs62435349	A	T	a	Hoxc9_MA0485.1	30	0	-	0	0	.
chr6	160974642	160974643	chr6:160974643:C:T	rs532800805	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	161002197	161002198	chr6:161002198:T:G	rs79191531	T	G	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr6	161023403	161023404	chr6:161023404:A:G	rs9347478	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	161106955	161106956	chr6:161106956:C:G	rs1543261	C	G	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	161136742	161136743	chr6:161136743:C:G	rs3734463	C	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr6	161150527	161150528	chr6:161150528:T:C	rs9458141	T	C	t	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	161184792	161184793	chr6:161184793:C:T	rs10945719	C	T	c	Hoxc9_MA0485.1	2	1	+	8.254609556529418	6.877591079368194	AGCCATAAATACC
chr6	161326077	161326078	chr6:161326078:C:T	rs187437341	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr6	161478158	161478159	chr6:161478159:T:A	rs6922432	T	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr6	161489738	161489739	chr6:161489739:C:T	rs10455886	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr6	161562043	161562044	chr6:161562044:G:A	rs538976560	G	A	g	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	161578365	161578366	chr6:161578366:C:G	rs1883875	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr6	161765511	161765512	chr6:161765512:T:C	rs7750784	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	161917652	161917653	chr6:161917653:T:C	rs10945789	T	C	T	Hoxc9_MA0485.1	6	1	-	8.528048685793683	5.49384291928426	GTCTGTAAATCTC
chr6	162050999	162051000	chr6:162051000:A:G	rs2187197	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr6	162119296	162119297	chr6:162119297:G:T	rs2023053	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	162150348	162150349	chr6:162150349:T:A	rs713056	T	A	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr6	162243117	162243118	chr6:162243118:T:C	rs752012047	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr6	162291141	162291142	chr6:162291142:A:G	rs2002682	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr6	162291154	162291155	chr6:162291155:G:C	rs115783267	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr6	162407554	162407555	chr6:162407555:G:A	rs9364653	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	162450264	162450265	chr6:162450265:T:C	rs6914080	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	162572345	162572346	chr6:162572346:T:C	rs34344906	T	C	T	Hoxc9_MA0485.1	6	1	-	8.880777032330062	5.846571265820645	AGCCATAAATTCT
chr6	163428271	163428272	chr6:163428272:T:G	rs186698846	T	G	T	Hoxc9_MA0485.1	8	1	-	7.985322459902345	3.134920287957685	TGCAATCAATCTG
chr6	163712747	163712748	chr6:163712748:C:T	rs116282043	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	163747526	163747527	chr6:163747527:T:C	rs7750152	T	C	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr6	163781149	163781150	chr6:163781150:T:C	rs9295230	T	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	163807045	163807046	chr6:163807046:C:T	rs74944213	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	163811239	163811240	chr6:163811240:C:T	rs34811073	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr6	163816946	163816947	chr6:163816947:A:T	rs13194833	A	T	A	Hoxc9_MA0485.1	9	1	-	10.96438649094815	7.136743922448125	ACCTATAAATCAC
chr6	163860669	163860670	chr6:163860670:C:T	rs16895433	C	T	C	Hoxc9_MA0485.1	0	1	-	13.270417924828896	12.737602791537896	GGCCATAAATCAT
chr6	163860670	163860671	chr6:163860671:G:A	rs56936161	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr6	164109151	164109152	chr6:164109152:G:A	rs767939053	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr6	164263271	164263272	chr6:164263272:T:C	rs794107	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	164322510	164322511	chr6:164322511:T:C	rs117043375	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	164569721	164569722	chr6:164569722:C:T	rs1603331	C	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	164997026	164997027	chr6:164997027:G:A	rs73788487	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	165187600	165187601	chr6:165187601:A:G	rs17493323	A	G	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr6	165301048	165301049	chr6:165301049:T:A	rs547269	T	A	T	Hoxc9_MA0485.1	8	1	-	8.811585470915455	1.9096269607804963	AACAGTAAATCAG
chr6	165543952	165543953	chr6:165543953:T:C	rs6925739	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	165606743	165606744	chr6:165606744:A:G	rs78294330	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr6	165606755	165606756	chr6:165606756:A:G	rs828568	A	G	G	Hoxc9_MA0485.1	8	1	+	8.685905114081985	1.7839466039470258	AACAGTAAATCAA
chr6	165606760	165606761	chr6:165606761:G:A	rs12525970	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr6	165626891	165626892	chr6:165626892:A:G	rs9348023	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr6	165690016	165690017	chr6:165690017:T:G	rs80085548	T	G	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr6	165717129	165717130	chr6:165717130:A:G	rs150379906	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	165890414	165890415	chr6:165890415:T:C	rs9457117	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	166447303	166447304	chr6:166447304:A:T	rs2281054	A	T	a	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	166501641	166501642	chr6:166501642:G:A	rs10946174	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	166617131	166617132	chr6:166617132:G:A	rs3799570	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr6	166646039	166646040	chr6:166646040:G:C	rs9356502	G	C	.	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr6	166659525	166659526	chr6:166659526:C:T	rs79192745	C	T	.	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr6	166718700	166718701	chr6:166718701:C:T	rs9295365	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr6	166734171	166734172	chr6:166734172:G:C	rs9459731	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr6	167100992	167100993	chr6:167100993:T:C	rs204293	T	C	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr6	167114329	167114330	chr6:167114330:C:A	rs6456157	C	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr6	167120108	167120109	chr6:167120109:A:G	rs78771775	A	G	A	Hoxc9_MA0485.1	5	1	-	8.787500378042688	4.3021890154042	GTAAATAAATCAC
chr6	167218611	167218612	chr6:167218612:G:T	rs12214655	G	T	g	Hoxc9_MA0485.1	4	1	+	7.664711023901222	5.163859495576207	CCTTGTAAATCAC
chr6	167412343	167412344	chr6:167412344:C:T	rs12210677	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr6	167523098	167523099	chr6:167523099:C:A	rs9329891	C	A	c	Hoxc9_MA0485.1	10	1	+	7.660383648437459	4.976383314563509	GGTAATGAATCAG
chr6	167571834	167571835	chr6:167571835:G:T	rs1026028312	G	T	g	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	167765498	167765499	chr6:167765499:T:C	rs9364307	T	C	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	167777564	167777565	chr6:167777565:C:G	rs633408	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr6	167978768	167978769	chr6:167978769:T:G	rs12193128	T	G	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr6	167998370	167998371	chr6:167998371:C:T	rs114924023	C	T	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	168133330	168133331	chr6:168133331:T:C	rs374621280	T	C	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr6	168133363	168133364	chr6:168133364:G:T	rs2046848	G	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr6	168152486	168152487	chr6:168152487:T:C	rs12199340	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr6	168152513	168152514	chr6:168152514:A:C	rs12197691	A	C	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	168172176	168172177	chr6:168172177:G:A	rs192555432	G	A	G	Hoxc9_MA0485.1	0	1	-	9.800629740880487	10.032973398399855	CGCAATAAATCTA
chr6	168197671	168197672	chr6:168197672:G:A	rs77237508	G	A	g	Hoxc9_MA0485.1	15	0	-	0	0	.
chr6	168514551	168514552	chr6:168514552:A:G	rs5016787	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr6	168766043	168766044	chr6:168766044:G:A	rs1575341	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr6	168950545	168950546	chr6:168950546:C:T	rs111458924	C	T	T	Hoxc9_MA0485.1	6	1	-	8.323258021444701	11.35746378795412	TGCCATGAATCTT
chr6	168950563	168950564	chr6:168950564:G:A	rs9455507	G	A	A	Hoxc9_MA0485.1	10	1	-	8.320094271885138	6.516258367576387	GGACATCAATCTT
chr6	169024096	169024097	chr6:169024097:A:G	rs11967180	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr6	169099363	169099364	chr6:169099364:T:C	rs9346617	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr6	169207785	169207786	chr6:169207786:G:A	rs56254113	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr6	169253915	169253916	chr6:169253916:G:A	rs557270914	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr6	169581323	169581324	chr6:169581324:A:G	rs7764627	A	G	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	169590023	169590024	chr6:169590024:A:G	rs77432181	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr6	169866208	169866209	chr6:169866209:G:T	rs567780125	G	T	g	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr6	169868436	169868437	chr6:169868437:T:C	rs4716349	T	C	t	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	170035387	170035388	chr6:170035388:T:C	rs6917521	T	C	T	Hoxc9_MA0485.1	4	1	-	8.87371083207853	7.705947118086946	GCAAATAAATCTC
chr6	170163396	170163397	chr6:170163397:T:C	rs4360117	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr6	170247812	170247813	chr6:170247813:G:A	rs2983213	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr6	170262619	170262620	chr6:170262620:A:G	rs563648790	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr6	170422406	170422407	chr6:170422407:G:C	rs6456211	G	C	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	83184	83185	chr7:83185:T:C	rs4076161	T	C	t	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	89965	89966	chr7:89966:C:T	rs117363254	C	T	N	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	93723	93724	chr7:93724:G:C	rs55980615	G	C	g	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	366273	366274	chr7:366274:G:C	rs1402685229	G	C	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	377176	377177	chr7:377177:A:G	rs185427528	A	G	a	Hoxc9_MA0485.1	11	1	+	8.592761345794287	4.1802279469259185	GAAAATAAATCAG
chr7	439572	439573	chr7:439573:C:T	rs149190344	C	T	c	Hoxc9_MA0485.1	12	1	-	7.438447581240073	7.312767224406603	CCCTATAAATCCG
chr7	658363	658364	chr7:658364:G:A	rs79478853	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	658365	658366	chr7:658366:T:G	rs75398562	T	G	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	805568	805569	chr7:805569:A:G	rs73038185	A	G	-	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	822059	822060	chr7:822060:T:C	rs78733180	T	C	T	Hoxc9_MA0485.1	4	1	-	9.176850515954937	8.009086801963353	ATCTATAAATCAA
chr7	993528	993529	chr7:993529:C:T	rs79244401	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	1096038	1096039	chr7:1096039:C:G	rs6978413	C	G	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	1225040	1225041	chr7:1225041:A:G	rs186343276	A	G	-	Hoxc9_MA0485.1	4	1	+	9.701454063387828	8.533690349396243	GCCCATAAATAAC
chr7	1225457	1225458	chr7:1225458:C:A	rs62435139	C	A	c	Hoxc9_MA0485.1	3	1	+	8.533690349396243	7.798939141825774	GCCCGTAAATAAC
chr7	1232186	1232187	chr7:1232187:C:A	rs554229908	C	A	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	1508791	1508792	chr7:1508792:C:T	chr7:1508792:C:T	C	T	C	Hoxc9_MA0485.1	1	1	-	6.333498342444712	4.774054768534651	GGCCCTAAATCCC
chr7	1768970	1768971	chr7:1768971:C:T	rs5008569	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	1768991	1768992	chr7:1768992:C:G	rs10248201	C	G	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	1801094	1801095	chr7:1801095:C:T	rs540633239	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	1843277	1843278	chr7:1843278:G:T	rs11767177	G	T	G	Hoxc9_MA0485.1	1	1	+	10.778163821283048	8.69540350070651	GGCAGTAAATCAA
chr7	1845507	1845508	chr7:1845508:T:G	rs13226911	T	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	2017232	2017233	chr7:2017233:G:A	rs4721308	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	2100710	2100711	chr7:2100711:C:G	rs73038445	C	G	C	Hoxc9_MA0485.1	2	1	+	7.61734284819883	4.921458706477519	GGCCGCAAATCAT
chr7	2104809	2104810	chr7:2104810:C:G	rs75415668	C	G	C	Hoxc9_MA0485.1	10	1	+	9.410686673192268	4.609615865444989	TCACATAAATCAC
chr7	2104816	2104817	chr7:2104817:G:C	rs143872879	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	2104824	2104825	chr7:2104825:G:A	rs535419974	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	2242471	2242472	chr7:2242472:A:G	rs34996498	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	2242495	2242496	chr7:2242496:A:G	chr7:2242496:A:G	A	G	A	Hoxc9_MA0485.1	8	1	+	8.393200682019085	1.4912421718841247	AGGAGTAAATCAC
chr7	2296240	2296241	chr7:2296241:A:G	rs138472728	A	G	A	Hoxc9_MA0485.1	12	1	-	9.56089899318892	9.814895946953472	TGAAATAAATCAT
chr7	2373693	2373694	chr7:2373694:G:T	rs3807432	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	2403412	2403413	chr7:2403413:G:C	rs570915732	G	C	G	Hoxc9_MA0485.1	4	1	+	6.901605196913959	2.931442229655885	GGCCGTAAATACG
chr7	2713504	2713505	chr7:2713505:G:A	rs949689966	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	2717578	2717579	chr7:2717579:C:T	rs950299413	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	2735144	2735145	chr7:2735145:C:T	rs141582036	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	2946114	2946115	chr7:2946115:C:T	rs41428650	C	T	C	Hoxc9_MA0485.1	3	1	+	8.538147304784008	7.649894531761386	TGACGTAAATCAA
chr7	2946124	2946125	chr7:2946125:G:A	rs17132867	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	3249806	3249807	chr7:3249807:C:T	rs80037532	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	3570731	3570732	chr7:3570732:C:T	rs10951245	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	3851656	3851657	chr7:3851657:G:T	rs12532912	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	4111257	4111258	chr7:4111258:T:C	rs62438180	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr7	4111281	4111282	chr7:4111282:T:C	rs6970287	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	4208680	4208681	chr7:4208681:G:A	rs17305543	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	4235600	4235601	chr7:4235601:A:G	rs13229094	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr7	4330838	4330839	chr7:4330839:C:T	rs2342822	C	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	4344017	4344018	chr7:4344018:G:A	rs7790997	G	A	G	Hoxc9_MA0485.1	8	1	-	7.098367542524891	5.046811204334591	GGCCATAACTCTG
chr7	4344028	4344029	chr7:4344029:C:T	chr7:4344029:C:T	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	4706677	4706678	chr7:4706678:C:T	rs140226424	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	4760062	4760063	chr7:4760063:T:C	rs6463034	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	5045373	5045374	chr7:5045374:T:C	rs13239077	T	C	c	Hoxc9_MA0485.1	4	1	-	9.444211769340072	8.276448055348489	GCCTATAAATCCC
chr7	5426345	5426346	chr7:5426346:T:G	rs1042137221	T	G	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	5428226	5428227	chr7:5428227:A:G	rs73333875	A	G	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	5430034	5430035	chr7:5430035:G:T	rs73333878	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	5471184	5471185	chr7:5471185:G:A	rs4724695	G	A	A	Hoxc9_MA0485.1	12	1	+	10.78389948292298	10.65821912608951	CGCAATAAATCAG
chr7	5486923	5486924	chr7:5486924:T:G	rs116258732	T	G	T	Hoxc9_MA0485.1	9	1	+	7.8469593401681585	0.9587335257945258	CTCCATAAATCCT
chr7	5486945	5486946	chr7:5486946:G:A	rs115060030	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	6049271	6049272	chr7:6049272:C:T	rs147948265	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	6081067	6081068	chr7:6081068:C:G	rs2527401	C	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	6175987	6175988	chr7:6175988:G:A	chr7:6175988:G:A	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	6268597	6268598	chr7:6268598:C:T	rs184140666	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	6302734	6302735	chr7:6302735:G:A	rs117126293	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	6370186	6370187	chr7:6370187:A:G	rs10261256	A	G	g	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	6446696	6446697	chr7:6446697:G:A	rs73342968	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	6827383	6827384	chr7:6827384:A:C	chr7:6827384:A:C	A	C	a	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	6827386	6827387	chr7:6827387:C:T	rs71524083	C	T	c	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	6917391	6917392	chr7:6917392:G:T	rs72585263	G	T	.	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	6963039	6963040	chr7:6963040:A:T	rs9690534	A	T	.	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	6963067	6963068	chr7:6963068:G:A	rs73063384	G	A	.	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr7	7183414	7183415	chr7:7183415:A:C	rs547569532	A	C	A	Hoxc9_MA0485.1	5	1	-	9.619389786413345	2.7208468106937502	AGAAATAAATCAG
chr7	7183427	7183428	chr7:7183428:T:C	chr7:7183428:T:C	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	7187795	7187796	chr7:7187796:C:T	rs4263662	C	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	7222114	7222115	chr7:7222115:C:G	rs1005750302	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	7222119	7222120	chr7:7222120:A:G	rs2024122	A	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	7231201	7231202	chr7:7231202:G:T	rs113915196	G	T	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	7405362	7405363	chr7:7405363:C:G	rs7800782	C	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	7564444	7564445	chr7:7564445:C:G	rs17168704	C	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	7738307	7738308	chr7:7738308:T:G	rs7796096	T	G	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	7762052	7762053	chr7:7762053:C:T	rs17137415	C	T	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	7772517	7772518	chr7:7772518:T:G	rs773094625	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	7963191	7963192	chr7:7963192:C:T	rs7807433	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	8155842	8155843	chr7:8155843:A:C	rs78393208	A	C	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	8669089	8669090	chr7:8669090:A:G	rs112856177	A	G	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	8710573	8710574	chr7:8710574:T:C	rs10280299	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	9024053	9024054	chr7:9024054:C:G	rs10234620	C	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	9125583	9125584	chr7:9125584:G:A	rs1440248	G	A	G	Hoxc9_MA0485.1	4	1	+	8.317959383837387	9.485723097828972	TGTTGTAAATCAG
chr7	9232929	9232930	chr7:9232930:G:T	rs77312552	G	T	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	9628312	9628313	chr7:9628313:C:G	chr7:9628313:C:G	C	G	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	10121990	10121991	chr7:10121991:A:T	rs17162655	A	T	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	10412503	10412504	chr7:10412504:A:C	rs74915282	A	C	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	10643233	10643234	chr7:10643234:A:G	rs3950561	A	G	A	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	10787758	10787759	chr7:10787759:A:G	rs10233178	A	G	A	Hoxc9_MA0485.1	4	1	+	8.018216250756199	6.850452536764615	AAGCATAAATCAG
chr7	10924667	10924668	chr7:10924668:A:G	rs1057037075	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	11128706	11128707	chr7:11128707:C:T	rs118150047	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	11176066	11176067	chr7:11176067:T:C	rs10245627	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	11472671	11472672	chr7:11472672:G:A	rs1029466	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	11485711	11485712	chr7:11485712:C:T	rs13240495	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	11485726	11485727	chr7:11485727:T:C	rs13227804	T	C	T	Hoxc9_MA0485.1	12	1	+	8.683902669392895	8.937899623157447	GGCAGTAAATAAT
chr7	11530421	11530422	chr7:11530422:G:A	rs6964213	G	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	11530735	11530736	chr7:11530736:A:G	rs12670615	A	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	11530751	11530752	chr7:11530752:G:A	rs12666325	G	A	G	Hoxc9_MA0485.1	4	1	+	8.276448055348489	9.444211769340072	GCCTGTAAATCCC
chr7	11743089	11743090	chr7:11743090:G:T	rs999880	G	T	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	11912269	11912270	chr7:11912270:C:A	rs17165372	C	A	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	11986351	11986352	chr7:11986352:T:C	rs75303544	T	C	T	Hoxc9_MA0485.1	12	1	+	7.240260870290083	7.494257824054634	GGCCATCAATTCT
chr7	12062300	12062301	chr7:12062301:A:G	rs79604863	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	12162618	12162619	chr7:12162619:A:G	rs78578338	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	12162639	12162640	chr7:12162640:T:C	rs12699312	T	C	C	Hoxc9_MA0485.1	11	1	-	8.2925946336311	3.880061234762732	TGCTATGAATCAT
chr7	12212456	12212457	chr7:12212457:A:G	rs145074253	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	12229287	12229288	chr7:12229288:C:T	rs13233991	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	12288155	12288156	chr7:12288156:C:T	rs57681723	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	12409483	12409484	chr7:12409484:G:C	rs62448597	G	C	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	12466272	12466273	chr7:12466273:G:A	rs887066	G	A	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	12497220	12497221	chr7:12497221:G:A	rs531800043	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	12544521	12544522	chr7:12544522:C:G	rs7787790	C	G	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	12623665	12623666	chr7:12623666:C:T	rs78442426	C	T	C	Hoxc9_MA0485.1	12	1	+	8.56259972832156	8.308602774557007	GATCGTAAATCTC
chr7	12737682	12737683	chr7:12737683:A:G	rs1524937	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	12771177	12771178	chr7:12771178:C:G	rs555014479	C	G	C	Hoxc9_MA0485.1	10	1	+	8.243965323608077	3.4428945158607998	GGCAATAAAACAG
chr7	12779448	12779449	chr7:12779449:T:G	rs10807754	T	G	T	Hoxc9_MA0485.1	11	1	+	8.561064491754342	5.006120478094997	GGCCGTAAATATT
chr7	12958588	12958589	chr7:12958589:C:G	rs10253223	C	G	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	13108383	13108384	chr7:13108384:T:C	rs553091388	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	13153554	13153555	chr7:13153555:G:T	rs57092450	G	T	G	Hoxc9_MA0485.1	1	1	+	7.955956927733914	5.873196607157374	GGCCATAACTCAG
chr7	13171869	13171870	chr7:13171870:C:T	rs2191038	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	13370014	13370015	chr7:13370015:A:G	rs1432498	A	G	a	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	14639807	14639808	chr7:14639808:A:G	rs10256605	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr7	14762733	14762734	chr7:14762734:C:T	rs4518556	C	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	14762899	14762900	chr7:14762900:T:G	rs561156645	T	G	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	14902155	14902156	chr7:14902156:C:T	rs73287453	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	15015764	15015765	chr7:15015765:A:T	rs145654889	A	T	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	15086330	15086331	chr7:15086331:G:A	rs73063226	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	15137076	15137077	chr7:15137077:G:A	rs10950553	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	15243969	15243970	chr7:15243970:G:A	rs28477564	G	A	A	Hoxc9_MA0485.1	1	1	+	11.303660265683876	9.744216691773817	GGTCATAAATCAA
chr7	15489527	15489528	chr7:15489528:A:C	rs564181067	A	C	A	Hoxc9_MA0485.1	12	1	-	9.042359809858215	8.578300984707889	CTCCATAAATCTT
chr7	15620718	15620719	chr7:15620719:A:G	rs17334667	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	15625460	15625461	chr7:15625461:C:G	rs2282932	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	15629111	15629112	chr7:15629112:C:T	rs17168927	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	15719273	15719274	chr7:15719274:C:T	rs10226819	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	15977979	15977980	chr7:15977980:A:G	rs9969139	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	16269040	16269041	chr7:16269041:T:C	rs932878411	T	C	T	Hoxc9_MA0485.1	4	1	-	8.481511175630374	7.313747461638791	ATCCATCAATCAT
chr7	16348020	16348021	chr7:16348021:T:G	rs77301988	T	G	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr7	16348034	16348035	chr7:16348035:C:T	rs760761811	C	T	C	Hoxc9_MA0485.1	4	1	-	9.066678550565866	10.23444226455745	TGTCGTAAATCTC
chr7	16647718	16647719	chr7:16647719:A:T	rs190590945	A	T	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	16663241	16663242	chr7:16663242:C:T	rs17625938	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	16672207	16672208	chr7:16672208:A:G	rs61216985	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	16728723	16728724	chr7:16728724:G:A	rs10260978	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	16728729	16728730	chr7:16728730:C:T	rs71540766	C	T	C	Hoxc9_MA0485.1	1	1	+	10.187839918808848	9.244040079563982	TCCTATAAATCAT
chr7	16811897	16811898	chr7:16811898:A:G	rs117803377	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	17075564	17075565	chr7:17075565:A:G	rs17137186	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	17406997	17406998	chr7:17406998:A:G	chr7:17406998:A:G	A	G	A	Hoxc9_MA0485.1	4	1	+	8.12838691813594	6.960623204144355	CCTAATAAATCTC
chr7	17423555	17423556	chr7:17423556:C:G	rs7793031	C	G	G	Hoxc9_MA0485.1	11	1	-	7.972920998393406	10.332464542362695	GCCCATAAATCGC
chr7	17517154	17517155	chr7:17517155:T:C	rs1051039190	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	17523657	17523658	chr7:17523658:A:G	rs11772776	A	G	A	Hoxc9_MA0485.1	0	1	+	8.688084811816337	9.22089994510734	ATTCATAAATCAA
chr7	17855951	17855952	chr7:17855952:G:C	rs2140710	G	C	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	17872128	17872129	chr7:17872129:G:T	rs1917368	G	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	17907171	17907172	chr7:17907172:G:A	rs17660539	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	17907204	17907205	chr7:17907205:A:C	rs2714860	A	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	18279038	18279039	chr7:18279039:C:T	rs56221959	C	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	18498427	18498428	chr7:18498428:G:T	rs111487878	G	T	G	Hoxc9_MA0485.1	10	1	-	7.1972896720219515	4.5132893381480015	AGCAGTGAATCTC
chr7	18697193	18697194	chr7:18697194:T:A	rs17139681	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	18716022	18716023	chr7:18716023:T:C	rs4721722	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	18768467	18768468	chr7:18768468:C:T	rs114407570	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	18977309	18977310	chr7:18977310:G:C	rs12533489	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	18978597	18978598	chr7:18978598:C:T	rs2240278	C	T	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	19030666	19030667	chr7:19030667:G:A	rs115076323	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	19269473	19269474	chr7:19269474:T:C	rs76070784	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	19327457	19327458	chr7:19327458:C:T	rs77842085	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	19377915	19377916	chr7:19377916:G:A	rs79396488	G	A	G	Hoxc9_MA0485.1	12	1	-	8.91139663604907	8.657399682284517	ACCTATAAATCCC
chr7	19470246	19470247	chr7:19470247:T:C	rs2110470	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	19526896	19526897	chr7:19526897:A:G	rs116326545	A	G	A	Hoxc9_MA0485.1	4	1	+	10.737061218156724	9.56929750416514	TGCTATAAATCAA
chr7	19560604	19560605	chr7:19560605:T:C	rs73086640	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr7	19665409	19665410	chr7:19665410:G:T	rs60221291	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	19665412	19665413	chr7:19665413:C:T	rs75412405	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	19665413	19665414	chr7:19665414:A:G	rs57589602	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	19665452	19665453	chr7:19665453:T:G	rs111863518	T	G	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	19773111	19773112	chr7:19773112:C:G	chr7:19773112:C:G	C	G	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	19773135	19773136	chr7:19773136:C:A	rs114353950	C	A	C	Hoxc9_MA0485.1	1	1	-	8.243965323608077	6.161205003031539	GGCAATAAAACAG
chr7	19777367	19777368	chr7:19777368:G:A	rs764674270	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	19900188	19900189	chr7:19900189:G:C	rs10249779	G	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	20239018	20239019	chr7:20239019:G:T	rs7806550	G	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	20402264	20402265	chr7:20402265:A:C	rs527305351	A	C	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	20491346	20491347	chr7:20491347:C:T	rs75308186	C	T	-	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	20575259	20575260	chr7:20575260:T:C	rs12700220	T	C	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	20696261	20696262	chr7:20696262:G:A	rs2158856	G	A	G	Hoxc9_MA0485.1	0	1	-	8.82276654877214	9.05511020629151	CGGCATAAATCAG
chr7	20862668	20862669	chr7:20862669:C:T	rs204585	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	21318317	21318318	chr7:21318318:G:C	rs2700294	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	21328152	21328153	chr7:21328153:C:T	rs2700296	C	T	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	21350398	21350399	chr7:21350399:A:G	rs763347720	A	G	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	21508361	21508362	chr7:21508362:G:C	rs62441764	G	C	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	21542693	21542694	chr7:21542694:C:G	rs11773317	C	G	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	21551000	21551001	chr7:21551001:C:T	rs72494316	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	21718930	21718931	chr7:21718931:C:T	rs6461596	C	T	C	Hoxc9_MA0485.1	1	1	-	8.812427840545922	7.252984266635862	GGAAATAAATTAT
chr7	21984207	21984208	chr7:21984208:A:G	rs74298655	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	21986298	21986299	chr7:21986299:T:C	rs1174995	T	C	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	22038993	22038994	chr7:22038994:T:A	rs1636322	T	A	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	22325879	22325880	chr7:22325880:T:C	rs33951611	T	C	C	Hoxc9_MA0485.1	8	1	-	10.754438966336	3.8524804562010417	GCTCATAAATCAT
chr7	22482240	22482241	chr7:22482241:G:A	rs28469242	G	A	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	22993085	22993086	chr7:22993086:T:A	rs1583512	T	A	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	23109670	23109671	chr7:23109671:T:C	rs986617366	T	C	T	Hoxc9_MA0485.1	10	1	+	8.105118913360432	9.908954817669184	GACTGTAAATTAC
chr7	23211879	23211880	chr7:23211880:G:T	rs6955934	G	T	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	23382799	23382800	chr7:23382800:C:T	rs61478643	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	23710065	23710066	chr7:23710066:G:A	rs113393234	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr7	23967852	23967853	chr7:23967853:A:G	rs7802177	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	24075640	24075641	chr7:24075641:C:T	rs34000673	C	T	c	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	24246997	24246998	chr7:24246998:T:C	rs16191	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	24407289	24407290	chr7:24407290:T:C	rs13221610	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	24609353	24609354	chr7:24609354:T:C	rs7805228	T	C	T	Hoxc9_MA0485.1	4	1	-	9.921556460115251	8.753792746123668	GCCTATAAATCTG
chr7	24669392	24669393	chr7:24669393:T:C	rs78312818	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	24719198	24719199	chr7:24719199:G:T	rs754554	G	T	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	24719232	24719233	chr7:24719233:C:T	rs754553	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	24755399	24755400	chr7:24755400:G:C	rs12700545	G	C	G	Hoxc9_MA0485.1	10	1	-	7.695374411714824	2.8943036039675465	CCTCGTAAATCTC
chr7	24821639	24821640	chr7:24821640:G:C	rs1041447111	G	C	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	24923131	24923132	chr7:24923132:C:T	rs10486440	C	T	C	Hoxc9_MA0485.1	6	1	+	8.212958511020174	6.857565340813639	TTCCATCAATCAC
chr7	25253854	25253855	chr7:25253855:A:G	rs2717922	A	G	A	Hoxc9_MA0485.1	5	1	-	9.204866997912314	4.719555635273827	GACAGTAAATCTC
chr7	25261413	25261414	chr7:25261414:T:C	rs1468234	T	C	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	25495688	25495689	chr7:25495689:C:G	rs11765569	C	G	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	25566991	25566992	chr7:25566992:T:A	rs17727166	T	A	T	Hoxc9_MA0485.1	5	1	+	7.564417757485548	0.6658747817659523	TCCAATCAATCTC
chr7	25670414	25670415	chr7:25670415:G:A	rs117990749	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	25670441	25670442	chr7:25670442:T:G	rs916720467	T	G	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr7	25671641	25671642	chr7:25671642:T:C	rs12667142	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	25778081	25778082	chr7:25778082:C:T	rs75792884	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	25852656	25852657	chr7:25852657:C:T	rs77601902	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	25857058	25857059	chr7:25857059:G:A	rs1179105638	G	A	g	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	25857082	25857083	chr7:25857083:A:G	chr7:25857083:A:G	A	G	A	Hoxc9_MA0485.1	7	1	+	7.985705390817954	1.0814763216123757	TGCTGTCAATCAT
chr7	26091466	26091467	chr7:26091467:A:G	rs7793753	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	26115893	26115894	chr7:26115894:A:G	rs2107348	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	26115898	26115899	chr7:26115899:G:A	rs62446337	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	26370338	26370339	chr7:26370339:T:G	rs2699815	T	G	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	26995327	26995328	chr7:26995328:A:G	rs2253415	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	27091848	27091849	chr7:27091849:G:C	rs750302213	G	C	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	27104427	27104428	chr7:27104428:G:A	rs116112701	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	27113587	27113588	chr7:27113588:T:C	rs80287504	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	27115277	27115278	chr7:27115278:C:G	rs921211977	C	G	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	27118136	27118137	chr7:27118137:G:A	rs4722657	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	27147987	27147988	chr7:27147988:C:T	rs181098649	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	27172908	27172909	chr7:27172909:G:T	rs538337325	G	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	27193739	27193740	chr7:27193740:C:T	rs17437551	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	27202739	27202740	chr7:27202740:A:C	rs1859168	A	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	27874484	27874485	chr7:27874485:G:A	rs17155971	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	27910323	27910324	chr7:27910324:C:G	rs7804617	C	G	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	27910335	27910336	chr7:27910336:A:C	rs7804500	A	C	A	Hoxc9_MA0485.1	11	1	-	8.47315819553812	4.918214181878775	ACCCATAAATTTG
chr7	28173204	28173205	chr7:28173205:T:C	rs508347	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	28405002	28405003	chr7:28405003:G:C	rs42707	G	C	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	28466532	28466533	chr7:28466533:G:A	rs2391666	G	A	G	Hoxc9_MA0485.1	0	1	+	11.214018506899079	10.681203373608076	GGCAATAAATCTG
chr7	28516465	28516466	chr7:28516466:C:A	rs35298927	C	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	28551563	28551564	chr7:28551564:G:A	chr7:28551564:G:A	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	28629318	28629319	chr7:28629319:C:T	rs6967474	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr7	28647105	28647106	chr7:28647106:A:G	rs41322	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	28688510	28688511	chr7:28688511:A:G	rs28382298	A	G	A	Hoxc9_MA0485.1	4	1	-	8.46539511777683	6.9960836788437675	AGCCTTAAATCTC
chr7	28785373	28785374	chr7:28785374:C:T	rs73079958	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	28785374	28785375	chr7:28785375:A:G	rs73079960	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	28940025	28940026	chr7:28940026:T:A	rs221138	T	A	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	28977365	28977366	chr7:28977366:T:C	rs77099168	T	C	T	Hoxc9_MA0485.1	7	1	-	9.075994156262004	2.1717650870564245	AGTAATAAATTAC
chr7	29190229	29190230	chr7:29190230:G:T	rs4722891	G	T	G	Hoxc9_MA0485.1	6	1	-	7.634293542078939	9.807624837409922	TGCCATCAATTTC
chr7	29196670	29196671	chr7:29196671:T:C	rs7784530	T	C	T	Hoxc9_MA0485.1	3	1	-	9.69612738864417	4.914482124228948	ACCAGTAAATCAT
chr7	29255702	29255703	chr7:29255703:A:G	rs12113986	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr7	29255719	29255720	chr7:29255720:C:T	rs7796223	C	T	C	Hoxc9_MA0485.1	1	1	-	8.644868523803158	7.085424949893096	AGACATCAATCAT
chr7	29274567	29274568	chr7:29274568:A:G	rs3793305	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	29274584	29274585	chr7:29274585:A:C	rs115393050	A	C	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	29295093	29295094	chr7:29295094:T:C	rs57402438	T	C	T	Hoxc9_MA0485.1	12	1	+	9.122142730613627	9.37613968437818	AACTGTAAATCAT
chr7	29332114	29332115	chr7:29332115:C:T	rs39130	C	T	c	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	29458013	29458014	chr7:29458014:A:C	rs3909209	A	C	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	29552593	29552594	chr7:29552594:G:T	rs2391763	G	T	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	29572996	29572997	chr7:29572997:T:C	rs1344479	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	29589062	29589063	chr7:29589063:T:A	rs10807849	T	A	T	Hoxc9_MA0485.1	5	1	+	9.15675835026504	2.2582153745454434	TCCCATCAATCAC
chr7	29611326	29611327	chr7:29611327:T:C	rs76173442	T	C	T	Hoxc9_MA0485.1	8	1	-	8.731954247304598	1.8299957371696398	AGCCATAAATATG
chr7	30242644	30242645	chr7:30242645:A:T	rs118106975	A	T	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	30795652	30795653	chr7:30795653:G:A	rs765508	G	A	G	Hoxc9_MA0485.1	10	1	-	7.6831797119375045	5.879343807628751	AACCATCAATCTG
chr7	30808034	30808035	chr7:30808035:C:T	rs112512800	C	T	c	Hoxc9_MA0485.1	0	1	-	7.912930092479393	7.380114959188391	GTCCATTAATCAC
chr7	30828875	30828876	chr7:30828876:T:C	rs7808904	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	31043668	31043669	chr7:31043669:G:A	rs75871930	G	A	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	31072009	31072010	chr7:31072010:C:T	rs144275262	C	T	-	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	31121638	31121639	chr7:31121639:A:G	rs7808175	A	G	A	Hoxc9_MA0485.1	12	1	-	9.929947046111517	10.18394399987607	AGATATAAATCAT
chr7	31267970	31267971	chr7:31267971:A:G	rs2690884	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	31517093	31517094	chr7:31517094:C:A	rs10239614	C	A	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr7	31758887	31758888	chr7:31758888:C:A	rs11973166	C	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	31812073	31812074	chr7:31812074:C:T	rs75179349	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	32023099	32023100	chr7:32023100:C:T	rs146588821	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	32060516	32060517	chr7:32060517:T:C	rs7794195	T	C	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	32127060	32127061	chr7:32127061:C:T	rs55691054	C	T	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	32178824	32178825	chr7:32178825:C:T	rs28409745	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	32587009	32587010	chr7:32587010:A:G	rs201885486	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	32611037	32611038	chr7:32611038:G:A	rs55953527	G	A	g	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	33061692	33061693	chr7:33061693:A:G	rs187539762	A	G	A	Hoxc9_MA0485.1	1	1	+	9.278591122091859	10.83803469600192	TATCATAAATCAT
chr7	33061723	33061724	chr7:33061724:T:A	rs77694159	T	A	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	33130163	33130164	chr7:33130164:A:T	rs187411516	A	T	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	33286686	33286687	chr7:33286687:T:G	rs72496118	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	33433022	33433023	chr7:33433023:A:C	chr7:33433023:A:C	A	C	A	Hoxc9_MA0485.1	11	1	+	9.268323262685929	7.215333407786848	GTCCATCAATCAC
chr7	33550715	33550716	chr7:33550716:A:C	rs75608008	A	C	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	33550733	33550734	chr7:33550734:A:G	rs73109629	A	G	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	33649676	33649677	chr7:33649677:A:T	rs75515431	A	T	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	33668525	33668526	chr7:33668526:A:G	rs7806997	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	33677651	33677652	chr7:33677652:C:T	rs17170345	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	33885522	33885523	chr7:33885523:A:T	rs35299075	A	T	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	33903361	33903362	chr7:33903362:T:C	rs775896084	T	C	T	Hoxc9_MA0485.1	8	1	-	9.612118676869795	2.7101601667348376	AGCCATAAATTTG
chr7	34070942	34070943	chr7:34070943:G:A	rs4140982	G	A	A	Hoxc9_MA0485.1	4	1	+	10.764310571822374	11.932074285813957	GGCAGTAAATCTC
chr7	34530511	34530512	chr7:34530512:T:C	rs188782593	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	34623099	34623100	chr7:34623100:G:A	rs6960331	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	34676899	34676900	chr7:34676900:T:A	rs56043957	T	A	T	Hoxc9_MA0485.1	12	1	-	9.598100736825051	10.187839918808848	TCCTATAAATCAA
chr7	35047961	35047962	chr7:35047962:G:T	rs35206184	G	T	.	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	35285837	35285838	chr7:35285838:G:C	rs4723408	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	35455210	35455211	chr7:35455211:G:A	rs10951441	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	35522154	35522155	chr7:35522155:G:A	rs73334204	G	A	G	Hoxc9_MA0485.1	1	1	+	8.3063677915934	6.746924217683339	AGCCATAAAACTC
chr7	35567863	35567864	chr7:35567864:C:T	rs6973837	C	T	C	Hoxc9_MA0485.1	2	1	+	10.260298671191283	8.883280194030059	ACCAATAAATCTC
chr7	35599235	35599236	chr7:35599236:C:G	rs1376300	C	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	35617645	35617646	chr7:35617646:G:A	rs1408519942	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	36020616	36020617	chr7:36020617:T:G	rs1997413	T	G	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	36048421	36048422	chr7:36048422:A:G	rs75378888	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	36095232	36095233	chr7:36095233:T:G	rs12534731	T	G	c	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	36095235	36095236	chr7:36095236:C:T	rs113756893	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	36723954	36723955	chr7:36723955:C:T	rs6462703	C	T	T	Hoxc9_MA0485.1	1	1	-	10.124936784676636	8.565493210766574	CGTAATAAATCAC
chr7	36788794	36788795	chr7:36788795:G:A	rs6963573	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	36904583	36904584	chr7:36904584:C:T	rs7776759	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	37330558	37330559	chr7:37330559:A:G	rs2717943	A	G	A	Hoxc9_MA0485.1	4	1	+	9.577663052681835	8.409899338690252	TGCCATCAATCAG
chr7	37353572	37353573	chr7:37353573:G:T	rs12532822	G	T	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	37376411	37376412	chr7:37376412:C:T	rs574664154	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	37421526	37421527	chr7:37421527:T:G	rs12533811	T	G	T	Hoxc9_MA0485.1	12	1	+	10.469211014931497	10.005152189781171	TGCTATAAATCTT
chr7	37421541	37421542	chr7:37421542:G:A	rs75129780	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	37434603	37434604	chr7:37434604:T:A	rs1647789	T	A	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	37549749	37549750	chr7:37549750:G:A	rs149952142	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	37550230	37550231	chr7:37550231:A:C	rs2033044	A	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	37670609	37670610	chr7:37670610:A:C	rs77321469	A	C	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	38020387	38020388	chr7:38020388:G:T	chr7:38020388:G:T	G	T	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	38291400	38291401	chr7:38291401:G:C	rs1860519	G	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	39034151	39034152	chr7:39034152:G:A	rs12532009	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr7	39552125	39552126	chr7:39552126:T:C	chr7:39552126:T:C	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	39754997	39754998	chr7:39754998:C:T	rs113116271	C	T	.	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	40306802	40306803	chr7:40306803:T:A	chr7:40306803:T:A	T	A	T	Hoxc9_MA0485.1	11	1	-	7.021899771183617	6.164310385974595	CCCAGTCAATCAC
chr7	40325126	40325127	chr7:40325127:A:G	rs10256791	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	40642004	40642005	chr7:40642005:A:C	chr7:40642005:A:C	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	41256388	41256389	chr7:41256389:C:A	rs11765437	C	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	41472140	41472141	chr7:41472141:A:G	rs273148	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	41508088	41508089	chr7:41508089:T:C	rs17171891	T	C	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	41944483	41944484	chr7:41944484:A:G	rs6463068	A	G	G	Hoxc9_MA0485.1	11	1	-	8.220977612832666	7.025577143142609	ACCTGTAAATCTG
chr7	41997011	41997012	chr7:41997012:T:C	rs182994866	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	42047967	42047968	chr7:42047968:G:C	rs1405752	G	C	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	42076288	42076289	chr7:42076289:C:T	rs10951666	C	T	C	Hoxc9_MA0485.1	3	1	+	8.31302221451669	7.424769441494068	TCCCATCAATCAA
chr7	42097012	42097013	chr7:42097013:A:G	rs928113605	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	42211035	42211036	chr7:42211036:A:G	rs3801228	A	G	A	Hoxc9_MA0485.1	5	1	-	8.729778628577904	4.244467265939418	ACTTATAAATCTC
chr7	42273590	42273591	chr7:42273591:G:A	rs73688692	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	42301294	42301295	chr7:42301295:A:G	chr7:42301295:A:G	A	G	A	Hoxc9_MA0485.1	10	1	+	8.840575432723302	6.723504958849974	GGCTATAAATATT
chr7	42407872	42407873	chr7:42407873:A:G	rs1560618	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	42552556	42552557	chr7:42552557:T:C	rs13223827	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	42674759	42674760	chr7:42674760:C:T	rs76904215	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	43005903	43005904	chr7:43005904:G:A	rs6943380	G	A	G	Hoxc9_MA0485.1	2	1	-	8.528048685793683	7.1510302086324575	GTCTGTAAATCTC
chr7	43318161	43318162	chr7:43318162:C:G	rs7806590	C	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	43762383	43762384	chr7:43762384:A:G	rs10486752	A	G	A	Hoxc9_MA0485.1	9	1	-	9.734956854508347	2.846731040134716	AGCAATAAATTAG
chr7	44105499	44105500	chr7:44105500:G:A	rs2537189	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	44105517	44105518	chr7:44105518:C:T	rs963894316	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	44163406	44163407	chr7:44163407:C:T	rs758989	C	T	T	Hoxc9_MA0485.1	4	1	-	10.457550277187764	11.625313991179347	TGCCGTAAATCAA
chr7	44163424	44163425	chr7:44163425:A:G	rs931046349	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	44630554	44630555	chr7:44630555:T:C	rs886651	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr7	44659159	44659160	chr7:44659160:T:C	rs9768229	T	C	G	Hoxc9_MA0485.1	11	1	-	8.33423634165083	3.9217029427824612	AGCATTAAATCAT
chr7	45028935	45028936	chr7:45028936:G:A	rs6944713	G	A	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	45028983	45028984	chr7:45028984:C:G	rs11763408	C	G	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr7	45185555	45185556	chr7:45185556:T:G	rs13235986	T	G	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	45185581	45185582	chr7:45185582:T:A	rs11974651	T	A	A	Hoxc9_MA0485.1	9	1	+	6.213156902012808	2.385514333512783	GGCCCTCAATCAC
chr7	45270719	45270720	chr7:45270720:G:C	rs1527970	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	45451788	45451789	chr7:45451789:A:T	rs56171002	A	T	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	45515386	45515387	chr7:45515387:A:G	rs7793106	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	45548943	45548944	chr7:45548944:A:G	rs112630305	A	G	A	Hoxc9_MA0485.1	8	1	+	10.539116850717733	3.6371583405827757	GCCAATAAATCTT
chr7	45642336	45642337	chr7:45642337:T:C	rs75112838	T	C	T	Hoxc9_MA0485.1	8	1	-	7.331123445678039	0.42916493554307905	TGCCCTAAATCAC
chr7	45677636	45677637	chr7:45677637:A:C	rs77043744	A	C	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	45979243	45979244	chr7:45979244:G:A	rs118045680	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	46011293	46011294	chr7:46011294:C:T	rs10225437	C	T	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	46164895	46164896	chr7:46164896:G:A	rs17172637	G	A	A	Hoxc9_MA0485.1	4	1	+	7.927718069234192	9.095481783225777	TCTCGTAAATCTC
chr7	46192345	46192346	chr7:46192346:C:G	rs2035571	C	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	46233652	46233653	chr7:46233653:C:A	rs1601540	C	A	C	Hoxc9_MA0485.1	6	1	+	7.660195464418936	9.833526759749917	CACCATCAATCAA
chr7	46508757	46508758	chr7:46508758:G:C	rs34957490	G	C	G	Hoxc9_MA0485.1	1	1	-	8.880292971995653	10.019253453327325	GCCCATAAATTTA
chr7	46513360	46513361	chr7:46513361:A:T	rs116914745	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	46606923	46606924	chr7:46606924:C:T	chr7:46606924:C:T	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	46607136	46607137	chr7:46607137:A:G	rs10249036	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	46772461	46772462	chr7:46772462:A:G	rs73322770	A	G	A	Hoxc9_MA0485.1	5	1	-	9.920091263390889	5.434779900752404	ATCAATAAATCAT
chr7	46784939	46784940	chr7:46784940:T:G	rs80254982	T	G	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	46954746	46954747	chr7:46954747:C:T	rs6953890	C	T	T	Hoxc9_MA0485.1	1	1	+	7.700222443552729	6.756422604307864	GCCCATAAAACTC
chr7	46955692	46955693	chr7:46955693:C:T	rs116034374	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	47105961	47105962	chr7:47105962:G:A	rs75843596	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	47264093	47264094	chr7:47264094:T:G	rs10951898	T	G	T	Hoxc9_MA0485.1	11	1	+	10.991760633306248	7.436816619646902	AGCTATAAATCTT
chr7	47337190	47337191	chr7:47337191:G:A	rs374273941	G	A	G	Hoxc9_MA0485.1	0	1	+	11.289807016223202	10.756991882932201	GGTCATAAATCTC
chr7	48074893	48074894	chr7:48074894:G:A	rs11976525	G	A	G	Hoxc9_MA0485.1	12	1	-	7.611572632371409	7.3575756786068585	GGCTGTAAATTCC
chr7	48120366	48120367	chr7:48120367:T:A	rs10226546	T	A	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	48427092	48427093	chr7:48427093:G:A	rs7458181	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	48427094	48427095	chr7:48427095:T:A	rs36035836	T	A	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	48616463	48616464	chr7:48616464:T:C	rs10269521	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	48942986	48942987	chr7:48942987:T:A	rs118020578	T	A	T	Hoxc9_MA0485.1	9	1	+	8.472295488076197	4.6446529195761705	GTTAATAAATCTC
chr7	49580927	49580928	chr7:49580928:G:A	rs6961052	G	A	A	Hoxc9_MA0485.1	0	1	+	9.772596239943649	9.239781106652647	GGCAATCAATCAA
chr7	50168275	50168276	chr7:50168276:C:T	rs13225543	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	50179516	50179517	chr7:50179517:G:A	rs192904351	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	50179528	50179529	chr7:50179529:A:G	rs74823690	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	50454722	50454723	chr7:50454723:G:A	rs4947980	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	50502228	50502229	chr7:50502229:G:C	rs880029	G	C	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	50644140	50644141	chr7:50644141:C:T	rs79928191	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	50679274	50679275	chr7:50679275:G:A	rs757999	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	50679289	50679290	chr7:50679290:C:T	rs61125116	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	51242158	51242159	chr7:51242159:T:C	rs191534946	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	51449695	51449696	chr7:51449696:A:G	rs13221079	A	G	a	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	51562533	51562534	chr7:51562534:G:A	rs57238616	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	51880893	51880894	chr7:51880894:G:A	rs57248172	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	52053665	52053666	chr7:52053666:G:A	rs7792651	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	52120858	52120859	chr7:52120859:G:A	rs2953432	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	52270549	52270550	chr7:52270550:C:A	rs117837722	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	52466322	52466323	chr7:52466323:C:G	rs2109950	C	G	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	52670948	52670949	chr7:52670949:C:T	rs34567158	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	52831493	52831494	chr7:52831494:T:C	rs1863786	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	52832722	52832723	chr7:52832723:A:G	rs2965617	A	G	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	52903859	52903860	chr7:52903860:C:T	rs11773742	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr7	52945171	52945172	chr7:52945172:C:G	rs7799263	C	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	53119883	53119884	chr7:53119884:G:A	rs55742526	G	A	g	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	53643122	53643123	chr7:53643123:A:T	rs9886208	A	T	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	53983807	53983808	chr7:53983808:G:A	rs12666230	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	54015343	54015344	chr7:54015344:C:T	rs75722905	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	54090950	54090951	chr7:54090951:A:T	rs1524390	A	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	54394668	54394669	chr7:54394669:A:C	rs34174137	A	C	a	Hoxc9_MA0485.1	7	1	+	9.014363914825388	2.110134845619811	AGACATAAATTAT
chr7	54481487	54481488	chr7:54481488:T:C	rs568197	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	54795438	54795439	chr7:54795439:C:T	rs28587170	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	54811668	54811669	chr7:54811669:C:T	rs73425541	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	54811680	54811681	chr7:54811681:G:C	rs73123977	G	C	G	Hoxc9_MA0485.1	10	1	-	9.310817124709166	4.509746316961887	GAAAATAAATCAC
chr7	55055520	55055521	chr7:55055521:A:G	rs17289099	A	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	55109002	55109003	chr7:55109003:G:C	rs4947975	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	55288299	55288300	chr7:55288300:C:A	rs12718954	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	55526438	55526439	chr7:55526439:G:A	rs138698864	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	55641510	55641511	chr7:55641511:T:C	rs946529962	T	C	.	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr7	55694917	55694918	chr7:55694918:C:A	rs4947521	C	A	.	Hoxc9_MA0485.1	10	1	+	8.307608602287747	5.623608268413798	CTCAATAAATCTT
chr7	55733785	55733786	chr7:55733786:C:G	rs190442865	C	G	.	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr7	55965864	55965865	chr7:55965865:A:G	rs4470984	A	G	G	Hoxc9_MA0485.1	8	1	+	7.412611787640219	0.5106532775052586	AGTCGTGAATCAC
chr7	55976255	55976256	chr7:55976256:T:C	rs116600510	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	55976284	55976285	chr7:55976285:C:T	rs75276564	C	T	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	56020307	56020308	chr7:56020308:G:A	rs4496923	G	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	56476295	56476296	chr7:56476296:G:T	rs561409095	G	T	g	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	57311568	57311569	chr7:57311569:G:A	rs5025827	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	57330994	57330995	chr7:57330995:A:G	rs1916773	A	G	a	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	57580635	57580636	chr7:57580636:T:C	rs10236410	T	C	.	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	63093687	63093688	chr7:63093688:G:A	rs750091952	G	A	G	Hoxc9_MA0485.1	6	1	+	7.647380538014269	10.681586304523687	AGCTGTGAATCAT
chr7	63902622	63902623	chr7:63902623:A:G	rs6962010	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	64558729	64558730	chr7:64558730:G:A	rs6957579	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	64892526	64892527	chr7:64892527:G:A	rs78512847	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	64959180	64959181	chr7:64959181:G:A	rs6955268	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	65438848	65438849	chr7:65438849:G:A	rs17783986	G	A	g	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	65449682	65449683	chr7:65449683:T:G	rs6972850	T	G	N	Hoxc9_MA0485.1	9	1	+	10.100212671056585	3.211986856682955	AGCCATCAATCAG
chr7	65449700	65449701	chr7:65449701:A:T	rs547729287	A	T	a	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	65892788	65892789	chr7:65892789:A:G	rs35850374	A	G	.	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	66111020	66111021	chr7:66111021:C:T	rs78514581	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	66149269	66149270	chr7:66149270:C:T	rs316316	C	T	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	66154116	66154117	chr7:66154117:G:A	rs1129531	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	66183743	66183744	chr7:66183744:A:G	rs4718316	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	66481591	66481592	chr7:66481592:G:C	rs7810213	G	C	-	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	66491296	66491297	chr7:66491297:T:C	rs62465403	T	C	t	Hoxc9_MA0485.1	8	1	-	9.698119357529107	2.7961608473941473	CGCAATAAATTAC
chr7	66629476	66629477	chr7:66629477:C:T	rs12531758	C	T	.	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	66928399	66928400	chr7:66928400:A:G	rs10950055	A	G	A	Hoxc9_MA0485.1	0	1	-	9.40746605857409	9.175122401054722	TGCTATCAATCAC
chr7	66952695	66952696	chr7:66952696:C:A	rs3778914	C	A	A	Hoxc9_MA0485.1	12	1	+	7.210675713360753	6.366939577612405	GGTAGTGAATCAC
chr7	66952696	66952697	chr7:66952697:G:A	rs79754846	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	67241410	67241411	chr7:67241411:A:G	rs7791642	A	G	.	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	67561332	67561333	chr7:67561333:T:C	rs4576304	T	C	t	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	67637365	67637366	chr7:67637366:T:C	rs12539606	T	C	c	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	68173451	68173452	chr7:68173452:T:A	rs62456633	T	A	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	68176869	68176870	chr7:68176870:A:G	rs75980220	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr7	68184859	68184860	chr7:68184860:T:G	rs10236956	T	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	68220531	68220532	chr7:68220532:T:C	rs6964267	T	C	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	68406360	68406361	chr7:68406361:G:A	rs62457505	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	68551404	68551405	chr7:68551405:A:C	rs2868549	A	C	A	Hoxc9_MA0485.1	3	1	+	8.312092466127618	9.046843673698087	AGAAGTAAATCTC
chr7	68586192	68586193	chr7:68586193:C:T	rs7808041	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	68656790	68656791	chr7:68656791:A:G	rs76914454	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	68820730	68820731	chr7:68820731:T:C	rs2869609	T	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	68969733	68969734	chr7:68969734:A:G	rs12532308	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	69033067	69033068	chr7:69033068:C:A	rs34433897	C	A	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	69150321	69150322	chr7:69150322:T:C	rs1195229	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	69283752	69283753	chr7:69283753:T:G	rs112862609	T	G	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	69283768	69283769	chr7:69283769:C:A	rs117301900	C	A	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	69365937	69365938	chr7:69365938:G:T	rs1011630	G	T	G	Hoxc9_MA0485.1	12	1	-	7.980614853500806	7.136878717752459	CTCCATCAATCAC
chr7	70044284	70044285	chr7:70044285:A:G	rs6970670	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	70143683	70143684	chr7:70143684:G:A	rs1055536325	G	A	G	Hoxc9_MA0485.1	1	1	+	8.515919203214327	6.956475629304268	GGTAATAAATCCA
chr7	70143714	70143715	chr7:70143715:T:G	chr7:70143715:T:G	T	G	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	70238701	70238702	chr7:70238702:A:C	rs12698878	A	C	A	Hoxc9_MA0485.1	0	1	-	10.622712580383652	11.678077332049405	TGCAATAAATCTT
chr7	70640310	70640311	chr7:70640311:G:A	rs9638590	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	70650896	70650897	chr7:70650897:A:G	rs10807724	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	70763818	70763819	chr7:70763819:T:C	rs6973153	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	71179357	71179358	chr7:71179358:G:A	rs2707419	G	A	G	Hoxc9_MA0485.1	3	1	-	8.055129341819361	7.166876568796737	AGACATCAATCAA
chr7	71310985	71310986	chr7:71310986:C:T	rs1363272415	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	71329496	71329497	chr7:71329497:A:G	rs144749257	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	71352413	71352414	chr7:71352414:T:C	rs10271589	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	71871720	71871721	chr7:71871721:A:G	rs35591931	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	71939921	71939922	chr7:71939922:A:G	rs6460698	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr7	71949130	71949131	chr7:71949131:A:C	rs10215280	A	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	72025757	72025758	chr7:72025758:G:C	rs1525130	G	C	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	72029931	72029932	chr7:72029932:C:T	rs145896446	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	72454730	72454731	chr7:72454731:G:A	rs11765238	G	A	G	Hoxc9_MA0485.1	10	1	-	9.19848508399655	7.394649179687797	ACAAATAAATCAC
chr7	72454755	72454756	chr7:72454756:A:C	rs2909988	A	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	72554524	72554525	chr7:72554525:G:T	rs28693687	G	T	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	73436082	73436083	chr7:73436083:C:A	rs927607632	C	A	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	73684199	73684200	chr7:73684200:A:G	rs79097318	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	73728755	73728756	chr7:73728756:G:A	rs11769503	G	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	73812034	73812035	chr7:73812035:G:T	rs558388210	G	T	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	73844419	73844420	chr7:73844420:G:A	rs10225983	G	A	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	73992274	73992275	chr7:73992275:G:A	rs148520453	G	A	G	Hoxc9_MA0485.1	1	1	+	9.094572386487854	7.535128812577792	GGCTATAAATATC
chr7	74008194	74008195	chr7:74008195:G:A	rs6971698	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	74203242	74203243	chr7:74203243:A:G	rs77084555	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	74993879	74993880	chr7:74993880:G:A	rs1398754789	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	75946007	75946008	chr7:75946008:C:T	rs28696382	C	T	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	76293651	76293652	chr7:76293652:G:A	chr7:76293652:G:A	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	76294400	76294401	chr7:76294401:A:C	chr7:76294401:A:C	A	C	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	76366057	76366058	chr7:76366058:G:A	rs143709670	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	76368757	76368758	chr7:76368758:G:A	rs182895937	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	76728408	76728409	chr7:76728409:A:G	rs13247359	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	76761062	76761063	chr7:76761063:T:G	rs143979869	T	G	.	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	76891694	76891695	chr7:76891695:C:T	rs10228027	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	77454064	77454065	chr7:77454065:A:C	rs78251556	A	C	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	77643459	77643460	chr7:77643460:A:G	rs2016281	A	G	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	77724710	77724711	chr7:77724711:C:T	rs55980640	C	T	c	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	78090435	78090436	chr7:78090436:A:C	rs80186520	A	C	A	Hoxc9_MA0485.1	9	1	-	8.686328707625627	1.798102893251995	TGCCATTAATCAT
chr7	78114304	78114305	chr7:78114305:T:C	rs3807728	T	C	T	Hoxc9_MA0485.1	12	1	+	8.762183332119934	9.016180285884486	AGATGTAAATCAT
chr7	78119284	78119285	chr7:78119285:G:C	rs28880428	G	C	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	78468834	78468835	chr7:78468835:T:C	rs11972334	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	78609448	78609449	chr7:78609449:T:C	rs38098	T	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	79187459	79187460	chr7:79187460:T:C	rs6961062	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	79377421	79377422	chr7:79377422:T:C	rs848927	T	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	79406616	79406617	chr7:79406617:T:C	rs76553235	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	79495619	79495620	chr7:79495620:C:T	rs116120893	C	T	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	79554018	79554019	chr7:79554019:T:G	rs62459059	T	G	.	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	79767518	79767519	chr7:79767519:A:G	rs2714642	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	80113955	80113956	chr7:80113956:A:G	rs6949030	A	G	A	Hoxc9_MA0485.1	4	1	+	8.830925348954224	7.663161634962641	CACAATAAATCTT
chr7	80278998	80278999	chr7:80278999:T:A	rs7792873	T	A	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	80626446	80626447	chr7:80626447:A:T	rs10247260	A	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	80741590	80741591	chr7:80741591:A:G	rs531924453	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	80919422	80919423	chr7:80919423:G:A	rs375323698	G	A	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	81066944	81066945	chr7:81066945:T:C	rs1528386	T	C	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	81783738	81783739	chr7:81783739:A:G	rs7788432	A	G	a	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	81965088	81965089	chr7:81965089:A:C	rs10447881	A	C	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	82012594	82012595	chr7:82012595:G:A	rs183372197	G	A	G	Hoxc9_MA0485.1	0	1	-	10.334191547846277	10.566535205365645	CGCAGTAAATCAC
chr7	82021237	82021238	chr7:82021238:A:G	rs184764433	A	G	A	Hoxc9_MA0485.1	0	1	-	9.814895946953472	9.582552289434105	TGAAATAAATCAC
chr7	82167319	82167320	chr7:82167320:G:A	rs17155962	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	82288948	82288949	chr7:82288949:G:A	rs116894339	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	82295639	82295640	chr7:82295640:C:A	rs77582645	C	A	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	82322668	82322669	chr7:82322669:T:C	rs42047	T	C	T	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	82443818	82443819	chr7:82443819:G:T	rs1052850959	G	T	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	82450906	82450907	chr7:82450907:T:C	rs78731352	T	C	T	Hoxc9_MA0485.1	8	1	-	7.847326495205944	0.9453679850709835	GAGCGTAAATCAT
chr7	82450910	82450911	chr7:82450911:C:T	rs57323487	C	T	C	Hoxc9_MA0485.1	4	1	-	7.847326495205944	9.015090209197528	GAGCGTAAATCAT
chr7	82688798	82688799	chr7:82688799:G:A	rs12707514	G	A	A	Hoxc9_MA0485.1	12	1	+	8.377426004310898	8.251745647477428	TCTCATAAATCTG
chr7	82746055	82746056	chr7:82746056:C:T	rs6979348	C	T	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	83162122	83162123	chr7:83162123:C:G	rs12666205	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	83191564	83191565	chr7:83191565:T:C	rs17286384	T	C	T	Hoxc9_MA0485.1	8	1	-	10.507347447514118	3.6053889373791588	GGCCATCAATCAA
chr7	83361660	83361661	chr7:83361661:C:T	rs2371656	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr7	83579864	83579865	chr7:83579865:T:C	rs183345	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	83674367	83674368	chr7:83674368:T:C	rs565318	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	83803829	83803830	chr7:83803830:A:G	rs10260714	A	G	A	Hoxc9_MA0485.1	0	1	+	9.730830650435015	10.263645783726016	AACCATAAATCTA
chr7	83884014	83884015	chr7:83884015:A:C	rs17241787	A	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	84070416	84070417	chr7:84070417:A:G	rs17296151	A	G	A	Hoxc9_MA0485.1	4	1	+	10.128238381505206	8.960474667513623	GGCAATAAATTTC
chr7	84114378	84114379	chr7:84114379:G:A	rs10231580	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	84181742	84181743	chr7:84181743:G:A	rs34183115	G	A	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	84281831	84281832	chr7:84281832:G:A	rs1006795	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	84337232	84337233	chr7:84337233:G:T	rs74323326	G	T	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr7	84720570	84720571	chr7:84720571:A:T	chr7:84720571:A:T	A	T	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	84746932	84746933	chr7:84746933:T:C	rs75012384	T	C	T	Hoxc9_MA0485.1	4	1	-	9.57284820385803	8.405084489866445	AGCAATAAATAAC
chr7	85358539	85358540	chr7:85358540:T:C	rs4281052	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	85713518	85713519	chr7:85713519:T:A	rs3934484	T	A	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	85987894	85987895	chr7:85987895:C:A	rs6465034	C	A	C	Hoxc9_MA0485.1	2	1	+	9.853668828073568	7.934265855669815	AACAATAAATCAA
chr7	86407347	86407348	chr7:86407348:C:T	rs60735198	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr7	86745283	86745284	chr7:86745284:T:C	rs60620129	T	C	C	Hoxc9_MA0485.1	4	1	-	7.552211824445528	6.384448110453945	GGCCATGAATAAT
chr7	86995585	86995586	chr7:86995586:T:C	rs1612547	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	87451381	87451382	chr7:87451382:T:C	rs2270187	T	C	C	Hoxc9_MA0485.1	2	1	-	9.522251585613157	8.745770416295603	GTACATAAATCAC
chr7	87542342	87542343	chr7:87542343:T:C	rs4728700	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	87564345	87564346	chr7:87564346:C:T	rs78711460	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	87591574	87591575	chr7:87591575:C:T	rs143422085	C	T	c	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	87785070	87785071	chr7:87785071:G:A	rs73200335	G	A	g	Hoxc9_MA0485.1	11	1	-	9.332301338465863	10.527701808155921	AGCTATAAATCCG
chr7	87873893	87873894	chr7:87873894:T:C	rs10280397	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	87964872	87964873	chr7:87964873:T:G	rs1637500	T	G	T	Hoxc9_MA0485.1	4	1	-	8.974001990400039	3.8360753091503828	TGACATAAATCTG
chr7	87964878	87964879	chr7:87964879:A:G	rs536978494	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	88361575	88361576	chr7:88361576:A:G	rs4727162	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	88432197	88432198	chr7:88432198:C:T	rs7792197	C	T	c	Hoxc9_MA0485.1	3	1	+	6.47601874120276	5.587765968180137	GGCCGTAAAACCC
chr7	88477774	88477775	chr7:88477775:C:A	rs4728752	C	A	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	88500212	88500213	chr7:88500213:C:T	rs181042	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	88543389	88543390	chr7:88543390:A:T	rs62461999	A	T	A	Hoxc9_MA0485.1	9	1	-	6.824878955736847	2.9972363872368217	GGCCTTCAATCTC
chr7	89259439	89259440	chr7:89259440:T:C	rs117755159	T	C	T	Hoxc9_MA0485.1	4	1	-	8.893569059513165	7.725805345521581	AACAATAAATTAC
chr7	89730186	89730187	chr7:89730187:C:G	rs2428283	C	G	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	89826723	89826724	chr7:89826724:T:G	rs10282408	T	G	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	89926637	89926638	chr7:89926638:A:G	rs62472209	A	G	A	Hoxc9_MA0485.1	8	1	+	7.719421932124361	0.8174634219894007	GGCTGTCAATCTG
chr7	90092250	90092251	chr7:90092251:C:T	rs77289360	C	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	90180946	90180947	chr7:90180947:T:C	rs10224488	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	90512588	90512589	chr7:90512589:G:T	rs12704547	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	90570694	90570695	chr7:90570695:C:T	rs11563839	C	T	C	Hoxc9_MA0485.1	10	1	+	8.803671505232897	6.999835600924144	CGTTGTAAATCAC
chr7	90701712	90701713	chr7:90701713:A:G	rs773324962	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	90708879	90708880	chr7:90708880:T:C	chr7:90708880:T:C	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr7	90788141	90788142	chr7:90788142:C:T	rs17163201	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	90828707	90828708	chr7:90828708:T:A	rs2374369	T	A	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	90828727	90828728	chr7:90828728:A:G	rs5009746	A	G	A	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	91110461	91110462	chr7:91110462:C:T	rs803157	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	91113441	91113442	chr7:91113442:G:T	rs803159	G	T	G	Hoxc9_MA0485.1	2	1	-	10.684612936638814	8.765209964235058	AGCCATAAATCCT
chr7	91202217	91202218	chr7:91202218:C:T	rs73215191	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	91202221	91202222	chr7:91202222:C:T	rs73215194	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	91288394	91288395	chr7:91288395:C:T	rs77162945	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	91343413	91343414	chr7:91343414:T:C	rs1366881	T	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	91353550	91353551	chr7:91353551:T:C	rs1429530	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	91942230	91942231	chr7:91942231:G:T	rs73403710	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	92424937	92424938	chr7:92424938:T:G	rs138923631	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	92851945	92851946	chr7:92851946:G:A	rs141313583	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	93161515	93161516	chr7:93161516:T:C	rs7810211	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	93161592	93161593	chr7:93161593:T:A	rs560960442	T	A	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	93245678	93245679	chr7:93245679:C:A	rs115725590	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	93545318	93545319	chr7:93545319:T:G	rs13229065	T	G	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	94297003	94297004	chr7:94297004:T:C	rs12669399	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	94304287	94304288	chr7:94304288:C:T	rs148346345	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	94415490	94415491	chr7:94415491:C:A	rs2250365	C	A	A	Hoxc9_MA0485.1	3	1	+	9.089500155818671	8.3547489482482	ACACATAAATCAA
chr7	94431764	94431765	chr7:94431765:G:A	rs75301094	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	94451853	94451854	chr7:94451854:G:A	rs74374003	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	94451868	94451869	chr7:94451869:C:A	rs10487261	C	A	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	94712696	94712697	chr7:94712697:A:G	rs28662328	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr7	94777112	94777113	chr7:94777113:A:G	rs4376436	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	94848684	94848685	chr7:94848685:A:G	rs143700098	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	94848719	94848720	chr7:94848720:A:G	rs10281038	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	94851630	94851631	chr7:94851631:G:T	rs12704767	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	95003763	95003764	chr7:95003764:G:A	rs7795316	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	95206147	95206148	chr7:95206148:A:G	rs528439937	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	95434503	95434504	chr7:95434504:C:T	rs577797279	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	95534766	95534767	chr7:95534767:G:C	rs62467698	G	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	95545179	95545180	chr7:95545180:A:G	rs73708034	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	95665558	95665559	chr7:95665559:C:T	rs772256686	C	T	C	Hoxc9_MA0485.1	1	1	-	9.51638648564257	7.956942911732511	TGTCATAAATCTG
chr7	95980441	95980442	chr7:95980442:T:G	rs4729229	T	G	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	96244924	96244925	chr7:96244925:T:C	rs3936185	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	96303602	96303603	chr7:96303603:C:G	chr7:96303603:C:G	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	96304802	96304803	chr7:96304803:G:A	rs76151951	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	96495662	96495663	chr7:96495663:A:G	rs10238953	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	96734412	96734413	chr7:96734413:C:T	rs17497711	C	T	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	97016016	97016017	chr7:97016017:A:G	rs1207730	A	G	A	Hoxc9_MA0485.1	4	1	+	10.612033866681143	9.44427015268956	TCCCATAAATCAG
chr7	97321472	97321473	chr7:97321473:A:G	rs9690669	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	97467368	97467369	chr7:97467369:C:A	rs1003620	C	A	A	Hoxc9_MA0485.1	1	1	-	9.205785788868322	7.123025468291784	CGCCATCAATCTC
chr7	97772562	97772563	chr7:97772563:C:A	rs1848857	C	A	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	97842259	97842260	chr7:97842260:A:C	chr7:97842260:A:C	A	C	.	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	97973496	97973497	chr7:97973497:C:T	rs56323096	C	T	.	Hoxc9_MA0485.1	0	1	+	8.177555681170883	8.409899338690252	CGCCGTCAATCAG
chr7	98706070	98706071	chr7:98706071:T:C	rs4729477	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	98713557	98713558	chr7:98713558:C:T	rs1023988	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	98763648	98763649	chr7:98763649:G:C	rs995524421	G	C	g	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	98791146	98791147	chr7:98791147:G:T	rs4727411	G	T	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	99155534	99155535	chr7:99155535:T:C	rs4454228	T	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	99616793	99616794	chr7:99616794:A:G	rs776221747	A	G	A	Hoxc9_MA0485.1	8	1	+	7.141581853036783	0.23962334290182224	GGCAGTCAATCCT
chr7	99616815	99616816	chr7:99616816:C:G	rs1463516434	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	99990356	99990357	chr7:99990357:T:C	rs6465759	T	C	.	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	100012897	100012898	chr7:100012898:C:G	rs1005577399	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	100103584	100103585	chr7:100103585:T:C	rs199955162	T	C	T	Hoxc9_MA0485.1	11	1	-	9.829520288636443	5.416986889768075	AGCAATCAATCAT
chr7	100138435	100138436	chr7:100138436:G:A	rs11771139	G	A	G	Hoxc9_MA0485.1	12	1	-	8.99020358061388	8.736206626849327	TAACATAAATCAC
chr7	100950013	100950014	chr7:100950014:G:C	rs11762787	G	C	G	Hoxc9_MA0485.1	3	1	-	7.851443204008028	2.335046732022337	AGACGTAAATCCC
chr7	100984656	100984657	chr7:100984657:T:C	rs12530867	T	C	c	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	101130726	101130727	chr7:101130727:T:A	rs2227711	T	A	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	101472936	101472937	chr7:101472937:T:C	rs1008064	T	C	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	101606234	101606235	chr7:101606235:C:T	rs76972281	C	T	C	Hoxc9_MA0485.1	2	1	-	8.147864892590793	8.924346061908347	CCGCATAAATCAT
chr7	101676454	101676455	chr7:101676455:C:T	rs893162377	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	101681557	101681558	chr7:101681558:G:A	rs953058686	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	101692003	101692004	chr7:101692004:G:A	rs79797802	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	101729544	101729545	chr7:101729545:A:C	rs77275637	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr7	101856269	101856270	chr7:101856270:A:C	chr7:101856270:A:C	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	101856278	101856279	chr7:101856279:C:T	rs79114985	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr7	101913177	101913178	chr7:101913178:G:C	rs750447642	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	102284649	102284650	chr7:102284650:T:C	rs2906711	T	C	C	Hoxc9_MA0485.1	11	1	+	9.354533716721772	8.159133247031713	GCCCATCAATCTC
chr7	102745712	102745713	chr7:102745713:T:G	rs189315613	T	G	N	Hoxc9_MA0485.1	12	1	+	9.791571378515082	9.327512553364755	GAACATAAATCAT
chr7	102745727	102745728	chr7:102745728:G:A	rs141664396	G	A	N	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	102913892	102913893	chr7:102913893:C:G	rs749902030	C	G	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	103162644	103162645	chr7:103162645:A:G	rs562641568	A	G	a	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	103488958	103488959	chr7:103488959:A:C	rs117805575	A	C	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	103566786	103566787	chr7:103566787:T:C	rs362726	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	103652717	103652718	chr7:103652718:C:T	rs41276154	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	103785667	103785668	chr7:103785668:A:T	rs262355	A	T	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	104497751	104497752	chr7:104497752:A:G	rs181977458	A	G	A	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	104979115	104979116	chr7:104979116:A:G	rs6972229	A	G	G	Hoxc9_MA0485.1	8	1	+	8.388847017674319	1.486888507539359	TCCTATAAATCCC
chr7	104982652	104982653	chr7:104982653:G:C	rs116001267	G	C	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	105306747	105306748	chr7:105306748:T:C	rs12534381	T	C	T	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	105623778	105623779	chr7:105623779:C:A	rs1790057	C	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	105769791	105769792	chr7:105769792:C:T	rs60087520	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	105877446	105877447	chr7:105877447:C:T	rs10262872	C	T	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr7	106062523	106062524	chr7:106062524:T:C	rs36106072	T	C	T	Hoxc9_MA0485.1	4	1	-	8.793949213571667	7.626185499580082	TTCAATAAATCTC
chr7	106068151	106068152	chr7:106068152:C:T	rs757667	C	T	T	Hoxc9_MA0485.1	3	1	+	8.957439866132594	8.06918709310997	GGACATAAATTAA
chr7	106074699	106074700	chr7:106074700:C:T	rs176463	C	T	C	Hoxc9_MA0485.1	0	1	+	7.556156268993682	7.788499926513049	CCCCATAAATATC
chr7	106127957	106127958	chr7:106127958:T:A	rs6466090	T	A	-	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	106187827	106187828	chr7:106187828:C:T	rs10248549	C	T	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	106267563	106267564	chr7:106267564:G:A	rs116021871	G	A	-	Hoxc9_MA0485.1	0	1	-	7.655002834780556	7.887346492299925	CGGCGTAAATCAG
chr7	106291430	106291431	chr7:106291431:C:T	rs12537455	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	106345844	106345845	chr7:106345845:G:A	rs113641485	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	106376966	106376967	chr7:106376967:C:A	rs75749149	C	A	C	Hoxc9_MA0485.1	12	1	+	7.261509837071716	6.417773701323369	AGGCATGAATCAC
chr7	106376967	106376968	chr7:106376968:C:T	rs1986970	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	106417951	106417952	chr7:106417952:T:C	rs17153076	T	C	T	Hoxc9_MA0485.1	6	1	-	8.971159811205123	5.936954044695702	TGAAATAAATCAA
chr7	106535823	106535824	chr7:106535824:G:A	rs28676577	G	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	106863047	106863048	chr7:106863048:A:G	rs190504837	A	G	A	Hoxc9_MA0485.1	8	1	+	9.026974017044886	2.125015506909929	GACCATAAATAAT
chr7	107026305	107026306	chr7:107026306:A:C	rs56132452	A	C	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	107317591	107317592	chr7:107317592:T:C	rs74745121	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	107838641	107838642	chr7:107838642:C:T	rs58547687	C	T	c	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	107983492	107983493	chr7:107983493:C:T	rs75205671	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	107998291	107998292	chr7:107998292:C:G	rs58208921	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	108191075	108191076	chr7:108191076:T:C	rs6962066	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	108233498	108233499	chr7:108233499:T:C	rs2267877	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	108406178	108406179	chr7:108406179:G:A	rs17421351	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	108449705	108449706	chr7:108449706:T:C	rs995310	T	C	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	108535896	108535897	chr7:108535897:T:C	rs7802956	T	C	t	Hoxc9_MA0485.1	12	1	+	9.333371060022374	9.587368013786927	ACTTATAAATCAT
chr7	108600646	108600647	chr7:108600647:T:C	rs1029707	T	C	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	109664052	109664053	chr7:109664053:C:A	rs3915078	C	A	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	110071222	110071223	chr7:110071223:A:G	rs7788952	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	110407516	110407517	chr7:110407517:C:A	chr7:110407517:C:A	C	A	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	110564646	110564647	chr7:110564647:C:G	rs6466344	C	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	111174937	111174938	chr7:111174938:A:G	rs2189322	A	G	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	111239719	111239720	chr7:111239720:A:G	rs37717	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	111262658	111262659	chr7:111262659:A:T	rs37736	A	T	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr7	111440184	111440185	chr7:111440185:T:G	rs10215967	T	G	T	Hoxc9_MA0485.1	5	1	+	8.04188692532205	1.1433439496024547	TCCCATGAATCAT
chr7	111615973	111615974	chr7:111615974:A:T	rs6952484	A	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	111872573	111872574	chr7:111872574:T:C	rs28593141	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	112123423	112123424	chr7:112123424:A:G	rs970890	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	112420933	112420934	chr7:112420934:G:A	rs12216563	G	A	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	112462490	112462491	chr7:112462491:C:T	rs1020805017	C	T	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	112562125	112562126	chr7:112562126:A:C	rs73432540	A	C	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	112567210	112567211	chr7:112567211:T:C	rs4473967	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	112771323	112771324	chr7:112771324:A:G	rs1227171	A	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	113354148	113354149	chr7:113354149:A:G	rs2692198	A	G	A	Hoxc9_MA0485.1	4	1	+	8.408218566784718	7.2404548527931345	GCACATAAATTAT
chr7	113424482	113424483	chr7:113424483:A:G	rs140318397	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	113424488	113424489	chr7:113424489:T:C	rs115235120	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	114007112	114007113	chr7:114007113:C:A	rs74756693	C	A	C	Hoxc9_MA0485.1	2	1	+	9.654574932989018	7.735171960585265	GACAATAAATCTG
chr7	114152467	114152468	chr7:114152468:T:C	rs2244419	T	C	C	Hoxc9_MA0485.1	9	1	+	8.87371083207853	1.9854850177048973	GCAAATAAATCTC
chr7	114785743	114785744	chr7:114785744:G:A	rs12667130	G	A	g	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr7	115154449	115154450	chr7:115154450:C:T	rs17137651	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr7	115227257	115227258	chr7:115227258:A:G	rs10247863	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr7	115355712	115355713	chr7:115355713:C:T	rs73717059	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	115357121	115357122	chr7:115357122:A:G	rs12706030	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	115492018	115492019	chr7:115492019:G:A	rs79804846	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr7	115562595	115562596	chr7:115562596:A:T	rs78535226	A	T	A	Hoxc9_MA0485.1	5	1	-	8.720070439457237	1.8215274637376435	AGGCATAAATCTG
chr7	115782864	115782865	chr7:115782865:C:T	rs189491826	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	116742814	116742815	chr7:116742815:A:G	rs61248776	A	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	116778152	116778153	chr7:116778153:A:C	rs563631358	A	C	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	116805036	116805037	chr7:116805037:G:A	rs187437	G	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	116876788	116876789	chr7:116876789:A:G	rs116928768	A	G	A	Hoxc9_MA0485.1	0	1	-	7.382112959373483	7.149769301854115	TGCTGTCAATCTC
chr7	117017908	117017909	chr7:117017909:C:G	rs549628830	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	117024672	117024673	chr7:117024673:C:G	rs12706137	C	G	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	117091091	117091092	chr7:117091092:G:A	rs145115066	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	117867414	117867415	chr7:117867415:G:C	rs149355619	G	C	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	117895514	117895515	chr7:117895515:G:A	rs1322939571	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	118076810	118076811	chr7:118076811:T:G	rs17140765	T	G	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr7	118719125	118719126	chr7:118719126:G:A	rs80182111	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr7	118746287	118746288	chr7:118746288:A:T	rs2689744	A	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	118970600	118970601	chr7:118970601:G:A	rs4518581	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	118995519	118995520	chr7:118995520:G:T	rs7788041	G	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	119664742	119664743	chr7:119664743:G:C	rs73211860	G	C	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	120858311	120858312	chr7:120858312:C:T	rs3757557	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	120950027	120950028	chr7:120950028:G:C	rs3757556	G	C	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr7	121076852	121076853	chr7:121076853:A:G	rs73221271	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	121105490	121105491	chr7:121105491:C:T	rs775861621	C	T	c	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	121157726	121157727	chr7:121157727:G:A	rs1444187177	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	121213010	121213011	chr7:121213011:A:G	rs1534015	A	G	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	121314217	121314218	chr7:121314218:T:C	rs983926	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	121474110	121474111	chr7:121474111:C:A	rs80033001	C	A	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr7	121544766	121544767	chr7:121544767:C:A	rs140795341	C	A	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	121796532	121796533	chr7:121796533:G:A	rs10238868	G	A	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr7	122155795	122155796	chr7:122155796:G:A	rs157655	G	A	A	Hoxc9_MA0485.1	0	1	+	10.49020911208403	9.957393978793029	GGCCATGAATCAC
chr7	122976435	122976436	chr7:122976436:G:A	rs11762227	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	123041285	123041286	chr7:123041286:G:A	rs56826564	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	123502314	123502315	chr7:123502315:G:A	rs17146047	G	A	G	Hoxc9_MA0485.1	2	1	-	8.74421329730328	7.367194820142055	GGCCTTAAATCTT
chr7	123746427	123746428	chr7:123746428:T:C	rs73718476	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	123754555	123754556	chr7:123754556:C:G	rs2456551	C	G	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	124074477	124074478	chr7:124074478:T:A	rs369491918	T	A	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	124106740	124106741	chr7:124106741:C:T	rs6967321	C	T	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	124402270	124402271	chr7:124402271:A:G	rs2040933	A	G	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr7	124429897	124429898	chr7:124429898:C:T	rs66461031	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	124459028	124459029	chr7:124459029:T:C	rs59834974	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	124630519	124630520	chr7:124630520:A:C	rs2049438	A	C	C	Hoxc9_MA0485.1	10	1	-	10.344027705245347	7.346792801806822	AGCCATAAATTAA
chr7	124724538	124724539	chr7:124724539:T:A	rs2402747	T	A	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	125516466	125516467	chr7:125516467:G:C	rs190636267	G	C	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	125599612	125599613	chr7:125599613:G:A	chr7:125599613:G:A	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	125629438	125629439	chr7:125629439:G:T	rs1419700	G	T	G	Hoxc9_MA0485.1	2	1	+	9.57765982466626	10.896525489226345	AGGCATAAATCAG
chr7	125877433	125877434	chr7:125877434:A:T	rs73720090	A	T	A	Hoxc9_MA0485.1	6	1	+	8.312092466127618	4.783368000590098	AGAAGTAAATCTC
chr7	126293227	126293228	chr7:126293228:G:T	rs1023310415	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	126665251	126665252	chr7:126665252:C:A	rs116998487	C	A	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	126689218	126689219	chr7:126689219:C:G	rs73720740	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	126848743	126848744	chr7:126848744:C:T	rs35505390	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	127245164	127245165	chr7:127245165:T:C	rs17866910	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	127366873	127366874	chr7:127366874:C:T	rs11563463	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	127366898	127366899	chr7:127366899:C:T	rs17864202	C	T	C	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	127539883	127539884	chr7:127539884:G:T	rs57867532	G	T	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr7	127596283	127596284	chr7:127596284:C:G	rs3735640	C	G	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	127794609	127794610	chr7:127794610:G:A	rs7802695	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	127881215	127881216	chr7:127881216:C:T	rs79722005	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	128057022	128057023	chr7:128057023:G:C	rs73455779	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	128057039	128057040	chr7:128057040:T:C	rs1013414813	T	C	T	Hoxc9_MA0485.1	4	1	-	8.316809185915721	7.149045471924139	GGACATGAATCAT
chr7	128102969	128102970	chr7:128102970:T:G	rs12534062	T	G	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	128146207	128146208	chr7:128146208:T:C	rs322735	T	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	128215403	128215404	chr7:128215404:A:G	rs9886026	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	128323499	128323500	chr7:128323500:G:A	rs73230652	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	128361901	128361902	chr7:128361902:C:G	rs192302354	C	G	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	128406714	128406715	chr7:128406715:T:G	rs28364722	T	G	T	Hoxc9_MA0485.1	11	1	-	9.77215333316915	7.71916347827007	GGCCATGAATCAG
chr7	128435599	128435600	chr7:128435600:C:T	rs75073296	C	T	c	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	128435627	128435628	chr7:128435628:T:A	rs4728109	T	A	t	Hoxc9_MA0485.1	9	1	+	8.778001991418163	4.950359422918136	AAAAATAAATCAC
chr7	128756527	128756528	chr7:128756528:A:G	rs339098	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	129081669	129081670	chr7:129081670:C:T	rs17425212	C	T	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	129101849	129101850	chr7:129101850:A:G	rs4731548	A	G	A	Hoxc9_MA0485.1	8	1	+	9.419194941261322	2.517236431126361	CTCAATAAATCAC
chr7	129101858	129101859	chr7:129101859:C:T	rs4731549	C	T	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	129354782	129354783	chr7:129354783:A:C	rs4460315	A	C	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	129362166	129362167	chr7:129362167:T:A	rs78438650	T	A	T	Hoxc9_MA0485.1	6	1	-	8.667582292087827	5.138857826550308	GTCTGTAAATCAG
chr7	129789119	129789120	chr7:129789120:C:T	rs147041694	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr7	129852122	129852123	chr7:129852123:A:C	rs2727461	A	C	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	130330765	130330766	chr7:130330766:T:C	rs6467298	T	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr7	130373986	130373987	chr7:130373987:G:A	rs149447423	G	A	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr7	130789740	130789741	chr7:130789741:A:T	rs67622126	A	T	A	Hoxc9_MA0485.1	7	1	+	9.337081915316285	4.14123070639971	AATCATAAATCAG
chr7	130853805	130853806	chr7:130853806:G:A	rs78085191	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr7	131059816	131059817	chr7:131059817:C:G	rs12672658	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	131620587	131620588	chr7:131620588:C:G	rs1077246	C	G	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	132299170	132299171	chr7:132299171:G:T	rs6957015	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	132323211	132323212	chr7:132323212:A:T	rs62466369	A	T	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	132474373	132474374	chr7:132474374:A:C	rs113247352	A	C	a	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	132624832	132624833	chr7:132624833:C:T	rs6957896	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	132728264	132728265	chr7:132728265:C:T	rs640339	C	T	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr7	132739629	132739630	chr7:132739630:G:A	rs1337046043	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	132777535	132777536	chr7:132777536:T:C	rs73726444	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	132799290	132799291	chr7:132799291:C:T	rs56009006	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	132837937	132837938	chr7:132837938:A:C	rs6967294	A	C	A	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	133014124	133014125	chr7:133014125:C:T	rs2160896	C	T	C	Hoxc9_MA0485.1	4	1	-	7.937239806425574	9.105003520417158	ATCCGTAAATTAC
chr7	133092411	133092412	chr7:133092412:G:T	rs10954405	G	T	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	133133601	133133602	chr7:133133602:C:T	rs10253530	C	T	c	Hoxc9_MA0485.1	22	0	-	0	0	.
chr7	133512859	133512860	chr7:133512860:C:T	rs936814645	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	134130637	134130638	chr7:134130638:A:G	rs11971451	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	134480193	134480194	chr7:134480194:A:C	rs782537	A	C	C	Hoxc9_MA0485.1	10	1	+	9.450010026219477	12.134010360093425	AGCCATAAATATC
chr7	134733068	134733069	chr7:134733069:A:G	rs10258722	A	G	A	Hoxc9_MA0485.1	4	1	+	8.791502533716802	7.623738819725218	TCCAATAAATTAC
chr7	134755533	134755534	chr7:134755534:T:G	rs984732	T	G	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	134804752	134804753	chr7:134804753:G:T	rs35478375	G	T	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	134814232	134814233	chr7:134814233:G:T	rs9641997	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	134985438	134985439	chr7:134985439:A:G	rs17168155	A	G	A	Hoxc9_MA0485.1	1	1	-	8.989436452322154	9.93323629156702	ATACATAAATCAC
chr7	134996554	134996555	chr7:134996555:T:C	rs11973318	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	135180045	135180046	chr7:135180046:C:T	rs56233231	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr7	135281535	135281536	chr7:135281536:C:T	rs13224172	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	135621199	135621200	chr7:135621200:T:G	chr7:135621200:T:G	T	G	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	135792021	135792022	chr7:135792022:G:A	rs72611509	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	135878059	135878060	chr7:135878060:C:T	rs11762963	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	136290651	136290652	chr7:136290652:C:T	rs62489354	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	136698823	136698824	chr7:136698824:T:C	rs7794080	T	C	c	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	137001223	137001224	chr7:137001224:G:A	rs10242859	G	A	g	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	137316817	137316818	chr7:137316818:G:A	rs141856512	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	137440168	137440169	chr7:137440169:T:C	rs1731913	T	C	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	137535704	137535705	chr7:137535705:C:T	rs834069	C	T	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr7	137535711	137535712	chr7:137535712:A:G	rs834068	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr7	137544681	137544682	chr7:137544682:G:T	rs864434	G	T	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr7	138127177	138127178	chr7:138127178:G:C	rs78852479	G	C	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	138352509	138352510	chr7:138352510:G:T	rs10262321	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr7	138565843	138565844	chr7:138565844:T:A	chr7:138565844:T:A	T	A	T	Hoxc9_MA0485.1	9	1	+	7.375119712579003	3.5474771440789765	GGCAGTTAATCAG
chr7	138666580	138666581	chr7:138666581:C:A	rs73460936	C	A	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	138719516	138719517	chr7:138719517:C:G	rs11764307	C	G	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr7	138739277	138739278	chr7:138739278:G:A	rs3734939	G	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	138739300	138739301	chr7:138739301:T:C	rs3734938	T	C	T	Hoxc9_MA0485.1	8	1	-	7.726617899736255	0.8246593896012953	CTCCATCAATCAT
chr7	138819959	138819960	chr7:138819960:C:T	rs12668843	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr7	138890246	138890247	chr7:138890247:G:A	rs6467815	G	A	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr7	138980354	138980355	chr7:138980355:C:T	rs55635149	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	139019064	139019065	chr7:139019065:T:C	rs6963434	T	C	T	Hoxc9_MA0485.1	11	1	+	9.225859226354649	8.030458756664592	AGAAATAAATCTT
chr7	139069292	139069293	chr7:139069293:C:A	rs149046848	C	A	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr7	139111635	139111636	chr7:139111636:T:A	rs17160764	T	A	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	139183310	139183311	chr7:139183311:G:A	rs73475324	G	A	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	139464565	139464566	chr7:139464566:C:T	rs11764434	C	T	c	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	139641848	139641849	chr7:139641849:A:G	rs17161078	A	G	A	Hoxc9_MA0485.1	6	1	+	9.837000029737856	6.802794263228437	GGTAATAAATCTG
chr7	139725505	139725506	chr7:139725506:A:C	rs978690872	A	C	A	Hoxc9_MA0485.1	8	1	+	9.57284820385803	4.7224460319133685	AGCAATAAATAAC
chr7	140446764	140446765	chr7:140446765:T:C	rs28832645	T	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	140488579	140488580	chr7:140488580:C:T	rs73163266	C	T	T	Hoxc9_MA0485.1	4	1	-	8.806768600231532	9.974532314223115	AGCCGTCAATCAA
chr7	141367029	141367030	chr7:141367030:C:T	rs73739812	C	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	141385713	141385714	chr7:141385714:A:G	rs10215677	A	G	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr7	141864979	141864980	chr7:141864980:T:C	rs1285896	T	C	t	Hoxc9_MA0485.1	8	1	-	12.215053173163144	5.3130946630281874	TGCCATAAATCAT
chr7	142272920	142272921	chr7:142272921:T:C	rs993190	T	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	142272935	142272936	chr7:142272936:C:T	rs2960765	C	T	C	Hoxc9_MA0485.1	12	1	+	8.931420737266622	8.67742378350207	CACTATAAATCTC
chr7	142322811	142322812	chr7:142322812:G:A	rs17162991	G	A	G	Hoxc9_MA0485.1	3	1	-	7.667078297437611	6.778825524414989	GGTCATCAATCCT
chr7	142348129	142348130	chr7:142348130:C:T	rs2855235	C	T	c	Hoxc9_MA0485.1	23	0	+	0	0	.
chr7	142666087	142666088	chr7:142666088:A:G	rs4726553	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr7	142666088	142666089	chr7:142666089:T:C	rs4726554	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	143051107	143051108	chr7:143051108:A:G	rs7801166	A	G	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	143269382	143269383	chr7:143269383:C:T	rs561674781	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	143406456	143406457	chr7:143406457:C:T	rs1214613750	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	143504826	143504827	chr7:143504827:C:T	rs2949751	C	T	c	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	143504863	143504864	chr7:143504864:C:T	rs55716333	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	143914466	143914467	chr7:143914467:T:C	rs12672911	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr7	144049650	144049651	chr7:144049651:A:G	rs55999989	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	144152905	144152906	chr7:144152906:G:C	rs1635899	G	C	g	Hoxc9_MA0485.1	12	1	-	8.87371083207853	8.15565505316365	GCAAATAAATCTC
chr7	144602056	144602057	chr7:144602057:T:C	rs17170241	T	C	C	Hoxc9_MA0485.1	9	1	+	11.32680040014052	4.438574585766889	TGCTATAAATCAT
chr7	144738230	144738231	chr7:144738231:G:C	rs73162791	G	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	144776444	144776445	chr7:144776445:C:T	rs1731106	C	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr7	145293479	145293480	chr7:145293480:A:G	rs2015788	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr7	145634414	145634415	chr7:145634415:C:G	rs850465	C	G	C	Hoxc9_MA0485.1	0	1	-	8.903318605492458	7.615610196307338	GAATATAAATCAT
chr7	146121512	146121513	chr7:146121513:T:C	rs62504786	T	C	T	Hoxc9_MA0485.1	8	1	-	8.376315859192959	1.4743573490579973	TGACATCAATCAC
chr7	146317372	146317373	chr7:146317373:A:G	rs143562742	A	G	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	146654239	146654240	chr7:146654240:G:A	rs79575361	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr7	146805344	146805345	chr7:146805345:G:C	chr7:146805345:G:C	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	147479095	147479096	chr7:147479096:T:C	rs4725734	T	C	T	Hoxc9_MA0485.1	7	1	-	10.161774281655877	3.257545212450299	AGTAATAAATCAG
chr7	147509196	147509197	chr7:147509197:T:C	rs147628055	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	147747979	147747980	chr7:147747980:A:G	rs12112564	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	147776099	147776100	chr7:147776100:A:C	chr7:147776100:A:C	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	148173329	148173330	chr7:148173330:C:T	rs2972112	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr7	148211565	148211566	chr7:148211566:T:C	rs4520084	T	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	148211601	148211602	chr7:148211602:C:T	rs4513897	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	148242064	148242065	chr7:148242065:A:G	rs1406601	A	G	G	Hoxc9_MA0485.1	0	1	+	8.989436452322154	9.522251585613157	ATACATAAATCAC
chr7	148242076	148242077	chr7:148242077:C:T	rs1406602	C	T	T	Hoxc9_MA0485.1	12	1	+	8.989436452322154	8.735439498557602	ATACATAAATCAC
chr7	148271536	148271537	chr7:148271537:T:C	rs6464864	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr7	148530773	148530774	chr7:148530774:C:G	rs11766141	C	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	148688632	148688633	chr7:148688633:T:C	rs10257756	T	C	T	Hoxc9_MA0485.1	11	1	-	9.05511020629151	4.642576807423141	TGGCATAAATCAG
chr7	148940697	148940698	chr7:148940698:T:C	rs9691157	T	C	T	Hoxc9_MA0485.1	8	1	-	7.547412726443604	0.6454542163086447	GCCCATGAATTAC
chr7	149626228	149626229	chr7:149626229:C:G	rs7783990	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	150355342	150355343	chr7:150355343:C:T	rs968869147	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr7	150358297	150358298	chr7:150358298:T:G	rs117588031	T	G	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr7	150382803	150382804	chr7:150382804:G:A	rs61043001	G	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	150386281	150386282	chr7:150386282:T:G	rs2888633	T	G	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	150427270	150427271	chr7:150427271:A:G	rs6944824	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	150444566	150444567	chr7:150444567:T:G	rs11764806	T	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	150564430	150564431	chr7:150564431:G:C	rs73727323	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	150613212	150613213	chr7:150613213:G:A	rs74893731	G	A	g	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	150879037	150879038	chr7:150879038:A:C	rs73468653	A	C	C	Hoxc9_MA0485.1	11	1	+	9.172387239039615	7.119397384140536	GACAATAAATTAT
chr7	150879048	150879049	chr7:150879049:G:A	rs73468655	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr7	151085529	151085530	chr7:151085530:G:A	rs4725388	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr7	151228951	151228952	chr7:151228952:C:T	rs141065124	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	151318525	151318526	chr7:151318526:T:G	rs62492424	T	G	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr7	151445046	151445047	chr7:151445047:G:A	rs75790492	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	151460326	151460327	chr7:151460327:G:C	rs193167866	G	C	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	151460327	151460328	chr7:151460328:T:G	chr7:151460328:T:G	T	G	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	151611480	151611481	chr7:151611481:T:C	rs4726060	T	C	-	Hoxc9_MA0485.1	0	1	+	9.096840168038593	8.864496510519226	TGAAATAAATCAG
chr7	151736609	151736610	chr7:151736610:C:T	chr7:151736610:C:T	C	T	-	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr7	151794730	151794731	chr7:151794731:T:C	rs150266211	T	C	T	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	151904500	151904501	chr7:151904501:C:T	rs79035037	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	151904572	151904573	chr7:151904573:C:T	rs200171626	C	T	C	Hoxc9_MA0485.1	23	0	+	0	0	.
chr7	151905631	151905632	chr7:151905632:A:G	rs55845539	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr7	151930898	151930899	chr7:151930899:A:G	rs1997334	A	G	G	Hoxc9_MA0485.1	0	1	+	8.000756921824458	8.53357205511546	ATCAATCAATCAC
chr7	152028109	152028110	chr7:152028110:A:G	rs76030055	A	G	A	Hoxc9_MA0485.1	12	1	-	10.622712580383652	10.876709534148205	TGCAATAAATCTT
chr7	152513404	152513405	chr7:152513405:G:C	rs7806275	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr7	152592950	152592951	chr7:152592951:T:C	rs11976381	T	C	C	Hoxc9_MA0485.1	0	1	-	7.743632922057486	8.276448055348489	ACCTGTAAATCCC
chr7	152592961	152592962	chr7:152592962:G:A	rs76555307	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr7	152668234	152668235	chr7:152668235:C:T	rs3218418	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr7	152717532	152717533	chr7:152717533:C:T	rs10265123	C	T	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr7	152860489	152860490	chr7:152860490:T:C	rs73490980	T	C	T	Hoxc9_MA0485.1	4	1	-	8.641407558427671	7.473643844436087	TGCCATAAAACAC
chr7	152864527	152864528	chr7:152864528:G:A	rs7792217	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr7	152947768	152947769	chr7:152947769:A:C	rs11974832	A	C	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	153070375	153070376	chr7:153070376:A:G	rs6958881	A	G	A	Hoxc9_MA0485.1	8	1	+	10.507347447514118	3.6053889373791588	GGCCATCAATCAA
chr7	153172971	153172972	chr7:153172972:A:C	rs55973021	A	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	153181784	153181785	chr7:153181785:A:C	rs4236445	A	C	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr7	153206150	153206151	chr7:153206151:G:C	rs2312593	G	C	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr7	153408512	153408513	chr7:153408513:A:G	rs2083992	A	G	A	Hoxc9_MA0485.1	5	1	-	9.429948576781735	4.94463721414325	GCTAATAAATCAA
chr7	153470568	153470569	chr7:153470569:A:G	rs7785678	A	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr7	153567416	153567417	chr7:153567417:T:C	rs58193351	T	C	T	Hoxc9_MA0485.1	0	1	-	9.700167262621415	10.232982395912416	AACTATAAATCAA
chr7	153590874	153590875	chr7:153590875:A:G	rs9648757	A	G	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	153827029	153827030	chr7:153827030:T:C	rs12671608	T	C	T	Hoxc9_MA0485.1	8	1	-	8.95315597862345	2.051197468488491	AGTCATAAATTTC
chr7	153886275	153886276	chr7:153886276:C:A	rs38981	C	A	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	154416182	154416183	chr7:154416183:G:A	rs4725541	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr7	154503960	154503961	chr7:154503961:A:G	rs12703360	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr7	154685140	154685141	chr7:154685141:G:A	rs6964368	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr7	154881006	154881007	chr7:154881007:G:A	rs3817519	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr7	154916790	154916791	chr7:154916791:C:T	rs114225235	C	T	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr7	155210953	155210954	chr7:155210954:A:C	rs12719668	A	C	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr7	155228718	155228719	chr7:155228719:G:C	rs79541239	G	C	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr7	155228739	155228740	chr7:155228740:T:C	rs56031075	T	C	C	Hoxc9_MA0485.1	9	1	+	8.50458699230768	1.6163611779340474	AGCAATGAATCAG
chr7	155234087	155234088	chr7:155234088:C:T	rs10236527	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr7	155312070	155312071	chr7:155312071:G:T	rs13223383	G	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr7	155376478	155376479	chr7:155376479:T:C	rs1421316	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr7	155511459	155511460	chr7:155511460:T:C	rs79996697	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	155824850	155824851	chr7:155824851:G:A	rs11576047	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	155849013	155849014	chr7:155849014:C:T	rs1225381	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr7	155951557	155951558	chr7:155951558:C:G	rs62480403	C	G	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	155951608	155951609	chr7:155951609:C:G	rs1870735	C	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr7	155957636	155957637	chr7:155957637:C:A	rs114447873	C	A	-	Hoxc9_MA0485.1	2	1	+	8.546437930846547	6.627034958442791	TGCCTTAAATCAT
chr7	155957651	155957652	chr7:155957652:G:A	rs115996476	G	A	-	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	155986448	155986449	chr7:155986449:G:A	rs79329808	G	A	G	Hoxc9_MA0485.1	0	1	+	8.581779380956826	8.048964247665824	GCCTATAAATTTT
chr7	156641026	156641027	chr7:156641027:A:C	rs538452772	A	C	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	156641033	156641034	chr7:156641034:G:C	rs111560888	G	C	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	156807316	156807317	chr7:156807317:A:C	rs11971289	A	C	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr7	156972071	156972072	chr7:156972072:A:C	rs3800868	A	C	A	Hoxc9_MA0485.1	6	1	+	8.563726694810166	6.390395399479183	AGGTATAAATCAA
chr7	157004248	157004249	chr7:157004249:T:C	rs1161147331	T	C	T	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr7	157021438	157021439	chr7:157021439:G:A	rs1490852637	G	A	g	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr7	157057768	157057769	chr7:157057769:A:G	rs28649708	A	G	.	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	157079100	157079101	chr7:157079101:T:C	rs2365999	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr7	157203327	157203328	chr7:157203328:C:G	rs2023977	C	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	157208942	157208943	chr7:157208943:A:G	rs3802113	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	157318615	157318616	chr7:157318616:G:A	rs76985996	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr7	157318619	157318620	chr7:157318620:C:A	rs74726638	C	A	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	157318620	157318621	chr7:157318621:C:T	rs115444417	C	T	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr7	157361467	157361468	chr7:157361468:G:A	rs7792758	G	A	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	157489707	157489708	chr7:157489708:A:T	rs79593883	A	T	T	Hoxc9_MA0485.1	8	1	+	9.072357660902494	2.1703991507675355	AGATATAAATCTT
chr7	157506175	157506176	chr7:157506176:T:C	rs34036749	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr7	157712404	157712405	chr7:157712405:G:A	rs115645793	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr7	157745110	157745111	chr7:157745111:T:G	rs1638743	T	G	G	Hoxc9_MA0485.1	4	1	-	9.441815446020714	4.303888764771056	GTCTATAAATCTT
chr7	157855986	157855987	chr7:157855987:A:G	rs10272713	A	G	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr7	157899036	157899037	chr7:157899037:G:C	rs1434987	G	C	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr7	158021522	158021523	chr7:158021523:C:T	rs2043498	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr7	158049172	158049173	chr7:158049173:G:A	rs74824587	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr7	158139330	158139331	chr7:158139331:T:C	rs11971401	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr7	158139362	158139363	chr7:158139363:C:T	rs11980808	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr7	158347998	158347999	chr7:158347999:G:A	rs9801465	G	A	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr7	158403581	158403582	chr7:158403582:T:C	rs113834921	T	C	T	Hoxc9_MA0485.1	5	1	+	7.124956415535453	2.6396450528969666	GCACGTCAATCAC
chr7	158468018	158468019	chr7:158468019:A:G	rs1670358	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr7	158468031	158468032	chr7:158468032:T:G	rs1670357	T	G	T	Hoxc9_MA0485.1	5	1	+	8.104493073531135	1.20595009781154	TCCCGTAAATTAT
chr7	158487760	158487761	chr7:158487761:A:G	rs79207561	A	G	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr7	158533681	158533682	chr7:158533682:G:A	rs60574959	G	A	G	Hoxc9_MA0485.1	4	1	+	8.538918397006306	9.706682110997889	AGCCGTCAATCTT
chr7	158623310	158623311	chr7:158623311:T:C	rs11760681	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr7	158681027	158681028	chr7:158681028:G:A	rs4909258	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr7	158864447	158864448	chr7:158864448:A:G	rs540943176	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr7	159207502	159207503	chr7:159207503:A:G	rs422755	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr7	159250840	159250841	chr7:159250841:T:C	rs6957158	T	C	.	Hoxc9_MA0485.1	16	0	-	0	0	.
chr7	159253364	159253365	chr7:159253365:G:A	rs7781371	G	A	.	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	275086	275087	chr8:275087:T:C	rs77043228	T	C	.	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	331571	331572	chr8:331572:T:C	rs6990287	T	C	.	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	394542	394543	chr8:394543:T:C	rs935563	T	C	.	Hoxc9_MA0485.1	5	1	+	8.753792746123668	4.268481383485184	GCCTGTAAATCTG
chr8	613387	613388	chr8:613388:C:T	rs79635084	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	626808	626809	chr8:626809:T:C	rs336432	T	C	C	Hoxc9_MA0485.1	8	1	-	8.94333860258644	2.0413800924514804	TGATATAAATCAG
chr8	686870	686871	chr8:686871:C:T	rs150264543	C	T	-	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	1132738	1132739	chr8:1132739:T:G	rs2100320	T	G	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	1132749	1132750	chr8:1132750:A:G	rs2100321	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	1180163	1180164	chr8:1180164:G:C	rs7821457	G	C	C	Hoxc9_MA0485.1	4	1	+	8.63341228788936	4.663249320631284	GGACGTAAATTAC
chr8	1245215	1245216	chr8:1245216:G:A	rs60603727	G	A	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	1245737	1245738	chr8:1245738:C:T	rs28582003	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	1260500	1260501	chr8:1260501:T:A	rs11781355	T	A	-	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	1262855	1262856	chr8:1262856:T:G	rs78027164	T	G	T	Hoxc9_MA0485.1	8	1	-	8.526232314734585	3.6758301427899265	GTCCATAAATTTT
chr8	1415800	1415801	chr8:1415801:T:C	rs1019024	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	1550264	1550265	chr8:1550265:G:A	chr8:1550265:G:A	G	A	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	1633672	1633673	chr8:1633673:C:T	rs6980953	C	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	1689045	1689046	chr8:1689046:T:A	rs73672931	T	A	T	Hoxc9_MA0485.1	5	1	+	7.842503767638783	0.9439607919191888	TGCAATGAATCTC
chr8	1746388	1746389	chr8:1746389:C:T	rs7813890	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	1746392	1746393	chr8:1746393:G:C	rs140455729	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	1803071	1803072	chr8:1803072:T:C	rs6996586	T	C	T	Hoxc9_MA0485.1	4	1	-	8.180809698652832	7.013045984661248	AGACATCAATCAG
chr8	1967960	1967961	chr8:1967961:T:G	rs13259513	T	G	t	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	1967977	1967978	chr8:1967978:T:G	rs4876266	T	G	t	Hoxc9_MA0485.1	2	1	-	8.69263089427739	10.612033866681143	TCACATAAATCAG
chr8	2010901	2010902	chr8:2010902:C:T	rs768752	C	T	C	Hoxc9_MA0485.1	3	1	+	6.753311537210579	5.865058764187955	GGTCGTCAATCCC
chr8	2010902	2010903	chr8:2010903:G:C	rs78700856	G	C	A	Hoxc9_MA0485.1	4	1	+	6.753311537210579	2.7831485699525036	GGTCGTCAATCCC
chr8	2053988	2053989	chr8:2053989:C:G	rs9285034	C	G	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr8	2099121	2099122	chr8:2099122:C:T	rs3817704	C	T	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	2099131	2099132	chr8:2099132:C:T	rs1007246947	C	T	c	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	2114071	2114072	chr8:2114072:G:C	rs73169411	G	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	2138078	2138079	chr8:2138079:C:A	chr8:2138079:C:A	C	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	2154248	2154249	chr8:2154249:A:G	rs17064779	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	2163105	2163106	chr8:2163106:A:C	rs17685326	A	C	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr8	2197825	2197826	chr8:2197826:G:A	rs317220	G	A	G	Hoxc9_MA0485.1	2	1	-	10.876709534148205	9.49969105698698	TGCAATAAATCTC
chr8	2344557	2344558	chr8:2344558:G:A	rs28412175	G	A	-	Hoxc9_MA0485.1	0	1	+	8.068426430101065	7.535611296810062	GGGAGTAAATCTC
chr8	2482530	2482531	chr8:2482531:C:A	rs62489661	C	A	c	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	2482546	2482547	chr8:2482547:A:C	rs11775243	A	C	c	Hoxc9_MA0485.1	5	1	-	9.215180512652141	2.3166375369325456	ACACATAAATCAG
chr8	2491024	2491025	chr8:2491025:G:A	rs10866940	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	2647736	2647737	chr8:2647737:T:C	rs10089592	T	C	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	2649381	2649382	chr8:2649382:C:T	rs10097215	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	2803414	2803415	chr8:2803415:T:C	rs74650283	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	2814289	2814290	chr8:2814290:G:C	rs7010216	G	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	2814319	2814320	chr8:2814320:G:C	rs7010347	G	C	C	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	2868450	2868451	chr8:2868451:C:A	rs17756913	C	A	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	3108805	3108806	chr8:3108806:T:C	rs3802292	T	C	T	Hoxc9_MA0485.1	4	1	-	9.528700421142135	8.360936707150552	TTCCATAAATCTC
chr8	3185097	3185098	chr8:3185098:A:C	rs1291398451	A	C	A	Hoxc9_MA0485.1	10	1	-	9.131000680304702	6.133765776866177	GGCTATAAATTTA
chr8	3285114	3285115	chr8:3285115:C:G	rs13281598	C	G	C	Hoxc9_MA0485.1	12	1	-	8.6580839054633	9.37613968437818	AACTGTAAATCAG
chr8	3311752	3311753	chr8:3311753:A:C	rs997481	A	C	A	Hoxc9_MA0485.1	7	1	+	9.172387239039615	2.268158169834038	GACAATAAATTAT
chr8	3311777	3311778	chr8:3311778:G:C	rs17079887	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	3830181	3830182	chr8:3830182:T:A	rs2975378	T	A	A	Hoxc9_MA0485.1	6	1	-	8.058871892755688	4.530147427218169	CTTCATAAATCAG
chr8	3859689	3859690	chr8:3859690:G:T	rs75204667	G	T	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	4075961	4075962	chr8:4075962:G:A	rs76954441	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	4670345	4670346	chr8:4670346:G:A	rs77167802	G	A	g	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	4803564	4803565	chr8:4803565:T:A	rs79915765	T	A	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	5023511	5023512	chr8:5023512:T:C	rs62491343	T	C	t	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	5234554	5234555	chr8:5234555:T:C	rs7832770	T	C	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	5486503	5486504	chr8:5486504:C:T	rs6999045	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	5599743	5599744	chr8:5599744:C:G	rs2733049	C	G	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	5614050	5614051	chr8:5614051:G:A	rs117892374	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	5675215	5675216	chr8:5675216:A:G	rs10503324	A	G	a	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	5675238	5675239	chr8:5675239:G:A	rs10503325	G	A	a	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	5855020	5855021	chr8:5855021:T:A	rs12679395	T	A	A	Hoxc9_MA0485.1	8	1	-	9.03904179486739	2.1370832847324324	TGTCATAAATCCC
chr8	5855041	5855042	chr8:5855042:C:G	rs12676869	C	G	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	5894533	5894534	chr8:5894534:A:G	rs2840492	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	6025298	6025299	chr8:6025299:C:A	rs2700749	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	6063259	6063260	chr8:6063260:T:A	rs141080178	T	A	T	Hoxc9_MA0485.1	5	1	+	8.066756676699326	1.1682137009797302	CCACATAAATCTT
chr8	6116319	6116320	chr8:6116320:A:G	rs11136971	A	G	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	6135026	6135027	chr8:6135027:G:A	rs56046539	G	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	6531902	6531903	chr8:6531903:T:C	rs1984859	T	C	T	Hoxc9_MA0485.1	29	0	-	0	0	.
chr8	6605481	6605482	chr8:6605482:A:G	rs3020252	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	6681660	6681661	chr8:6681661:A:G	rs2911998	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	6720656	6720657	chr8:6720657:A:C	rs2980691	A	C	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	6836344	6836345	chr8:6836345:A:C	rs79485561	A	C	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	6859234	6859235	chr8:6859235:A:G	rs6988759	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr8	6859264	6859265	chr8:6859265:C:G	rs10095208	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	6880260	6880261	chr8:6880261:C:T	rs2472143	C	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	6890363	6890364	chr8:6890364:G:A	rs2741717	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	7027355	7027356	chr8:7027356:T:C	rs6984215	T	C	.	Hoxc9_MA0485.1	4	1	-	9.13125818632254	7.963494472330958	GTCAATAAATCTG
chr8	7028388	7028389	chr8:7028389:T:A	rs7820625	T	A	.	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	7029540	7029541	chr8:7029541:T:G	rs11137086	T	G	.	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	7032425	7032426	chr8:7032426:G:C	rs6993492	G	C	.	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	7088810	7088811	chr8:7088811:T:C	rs55655912	T	C	.	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	7445634	7445635	chr8:7445635:C:T	rs2740056	C	T	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	8219767	8219768	chr8:8219768:C:T	rs371441513	C	T	.	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	8330542	8330543	chr8:8330543:C:A	rs17150101	C	A	C	Hoxc9_MA0485.1	2	1	-	9.940277963849518	11.259143628409603	GGGTATAAATCAC
chr8	8335323	8335324	chr8:8335324:A:C	rs2979222	A	C	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	8610721	8610722	chr8:8610722:G:C	rs1522835	G	C	G	Hoxc9_MA0485.1	2	1	-	7.940661921956944	5.244777780235636	GGCTGTAAATAAA
chr8	8618245	8618246	chr8:8618246:A:C	rs9987367	A	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	8627691	8627692	chr8:8627692:C:T	rs117556026	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	8627702	8627703	chr8:8627703:C:G	rs187393452	C	G	C	Hoxc9_MA0485.1	10	1	+	8.378439427352337	3.5773686196050583	GGTAATGAATCAC
chr8	8635298	8635299	chr8:8635299:T:G	rs7824895	T	G	G	Hoxc9_MA0485.1	6	1	-	8.354817850924574	6.181486555593593	TGCAATAAATTTG
chr8	8635317	8635318	chr8:8635318:T:A	rs2177255	T	A	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	8635621	8635622	chr8:8635622:G:A	chr8:8635622:G:A	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	8635624	8635625	chr8:8635625:C:A	rs1522840	C	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	8660408	8660409	chr8:8660409:G:A	rs1522838	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	8669776	8669777	chr8:8669777:C:T	rs192026757	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	8789363	8789364	chr8:8789364:G:A	rs116842825	G	A	g	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	8804527	8804528	chr8:8804528:T:C	rs78232580	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	8872389	8872390	chr8:8872390:G:A	rs10098667	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	8957513	8957514	chr8:8957514:T:A	rs7843864	T	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	8973140	8973141	chr8:8973141:T:C	rs57719687	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	8994370	8994371	chr8:8994371:G:A	rs2953802	G	A	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	9085150	9085151	chr8:9085151:G:T	rs7011476	G	T	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	9118016	9118017	chr8:9118017:G:C	rs17155257	G	C	C	Hoxc9_MA0485.1	2	1	-	10.019253453327325	7.323369311606018	GGCCATAAATTTA
chr8	9292069	9292070	chr8:9292070:G:C	rs141937385	G	C	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	9292101	9292102	chr8:9292102:T:C	rs330089	T	C	T	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	9329013	9329014	chr8:9329014:C:G	rs4841134	C	G	c	Hoxc9_MA0485.1	12	1	-	8.197697749494534	8.915753528409413	AGCAGTCAATCAG
chr8	9337159	9337160	chr8:9337160:G:A	rs56731460	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	9626410	9626411	chr8:9626411:G:A	rs10903315	G	A	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	9912775	9912776	chr8:9912776:G:T	rs17150744	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	10025621	10025622	chr8:10025622:T:G	rs814359	T	G	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr8	10062177	10062178	chr8:10062178:G:A	rs115656383	G	A	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	10095243	10095244	chr8:10095244:G:A	rs182405042	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	10193107	10193108	chr8:10193108:G:A	rs17748464	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	10213364	10213365	chr8:10213365:A:G	rs62491577	A	G	a	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	10271028	10271029	chr8:10271029:A:G	rs2975668	A	G	A	Hoxc9_MA0485.1	4	1	+	10.105663337149032	8.937899623157447	GGCAATAAATAAC
chr8	10417316	10417317	chr8:10417317:T:G	rs17710558	T	G	T	Hoxc9_MA0485.1	7	1	-	9.441249972810242	2.5370209036046614	AGTCATCAATCAC
chr8	10521523	10521524	chr8:10521524:G:T	rs111257431	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	10555796	10555797	chr8:10555797:G:C	rs7820528	G	C	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr8	10654636	10654637	chr8:10654637:G:C	rs11993512	G	C	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr8	10654676	10654677	chr8:10654677:C:T	rs75375907	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	10709319	10709320	chr8:10709320:T:G	rs12676319	T	G	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr8	10772367	10772368	chr8:10772368:C:G	rs4240668	C	G	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr8	10846398	10846399	chr8:10846399:G:A	rs1055329	G	A	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	10891310	10891311	chr8:10891311:G:C	rs139396712	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	11053641	11053642	chr8:11053642:G:A	rs180911388	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	11077571	11077572	chr8:11077572:T:C	rs11773990	T	C	C	Hoxc9_MA0485.1	0	1	+	8.416483773372795	8.184140115853426	TCCTGTAAATCTC
chr8	11124133	11124134	chr8:11124134:G:C	rs2409711	G	C	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	11389459	11389460	chr8:11389460:C:T	rs79045945	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	11461127	11461128	chr8:11461128:C:T	rs146862731	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	11539364	11539365	chr8:11539365:A:G	rs2248325	A	G	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	11589358	11589359	chr8:11589359:T:C	rs11778830	T	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	11658582	11658583	chr8:11658583:G:C	rs62489278	G	C	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr8	11679128	11679129	chr8:11679129:G:T	rs4840575	G	T	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	11679895	11679896	chr8:11679896:A:G	rs116384636	A	G	A	Hoxc9_MA0485.1	4	1	+	7.574786868801703	6.40702315481012	GGCCATGAATTTT
chr8	11688591	11688592	chr8:11688592:G:A	rs10110029	G	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	11795640	11795641	chr8:11795641:T:C	rs7845566	T	C	T	Hoxc9_MA0485.1	12	1	+	8.8188766760749	9.072873629839453	TGCAATAAATTTT
chr8	11795642	11795643	chr8:11795643:A:G	rs149420069	A	G	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	11795644	11795645	chr8:11795645:A:G	chr8:11795645:A:G	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	11795644	11795645	chr8:11795645:A:T	rs67192535	A	T	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	11795645	11795646	chr8:11795646:C:T	rs7824202	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	11891732	11891733	chr8:11891733:A:C	rs55894533	A	C	N	Hoxc9_MA0485.1	0	1	+	8.37447917828482	7.619585902390702	ACCAGTAAATCTG
chr8	11891761	11891762	chr8:11891762:G:T	rs55933859	G	T	g	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	11902981	11902982	chr8:11902982:C:G	rs138841112	C	G	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	11987163	11987164	chr8:11987164:T:C	rs7461560	T	C	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	11990951	11990952	chr8:11990952:T:C	rs79433440	T	C	.	Hoxc9_MA0485.1	4	1	-	10.228460637150343	9.06069692315876	AGACATAAATCAA
chr8	12568337	12568338	chr8:12568338:C:T	rs2409954	C	T	.	Hoxc9_MA0485.1	1	1	+	7.602697851548999	6.658898012304134	CCACATAAATCTG
chr8	12568343	12568344	chr8:12568344:A:G	rs55667927	A	G	.	Hoxc9_MA0485.1	7	1	+	7.602697851548999	0.6984687823434209	CCACATAAATCTG
chr8	12774816	12774817	chr8:12774817:G:A	rs7463211	G	A	g	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	12810397	12810398	chr8:12810398:C:T	rs117051243	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	12845292	12845293	chr8:12845293:T:A	rs34069331	T	A	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	12873619	12873620	chr8:12873620:C:T	rs193256971	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	12950843	12950844	chr8:12950844:A:G	rs542125136	A	G	A	Hoxc9_MA0485.1	6	1	+	8.413745654202705	5.379539887693283	CCCCATAAATAAC
chr8	13133913	13133914	chr8:13133914:A:G	rs112564636	A	G	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	13194358	13194359	chr8:13194359:C:T	rs750964640	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	13386825	13386826	chr8:13386826:G:A	rs17216024	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	13424981	13424982	chr8:13424982:C:G	rs72603959	C	G	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	13546793	13546794	chr8:13546794:T:C	rs7835899	T	C	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	13546835	13546836	chr8:13546836:C:T	rs7814354	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	13743691	13743692	chr8:13743692:C:T	rs5012670	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	13745732	13745733	chr8:13745733:C:T	rs4357291	C	T	T	Hoxc9_MA0485.1	12	1	-	7.196869085734034	7.071188728900563	GGGTGTAAATCTG
chr8	13956332	13956333	chr8:13956333:T:A	rs11773970	T	A	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	13958155	13958156	chr8:13958156:C:T	rs73514527	C	T	C	Hoxc9_MA0485.1	12	1	-	7.689393012592613	7.563712655759143	GTCCATGAATCAG
chr8	14059507	14059508	chr8:14059508:C:T	rs10503474	C	T	C	Hoxc9_MA0485.1	12	1	-	9.581455289056192	9.455774932222722	AGCTATAAATTAG
chr8	14070491	14070492	chr8:14070492:C:T	rs9650351	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	14155029	14155030	chr8:14155030:A:C	chr8:14155030:A:C	A	C	A	Hoxc9_MA0485.1	5	1	-	10.750342612664364	3.8517996369447713	GGCTGTAAATCAG
chr8	14166915	14166916	chr8:14166916:A:G	rs10102785	A	G	A	Hoxc9_MA0485.1	4	1	+	9.46386327568015	8.296099561688566	AGCCATAAATAAA
chr8	14276406	14276407	chr8:14276407:A:G	rs1426997	A	G	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	14592161	14592162	chr8:14592162:G:A	rs2036825	G	A	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	14661586	14661587	chr8:14661587:T:A	rs17119956	T	A	t	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	14661597	14661598	chr8:14661598:G:A	rs11203651	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	15196226	15196227	chr8:15196227:C:T	rs62501991	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr8	15378390	15378391	chr8:15378391:A:G	rs13270271	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	15842335	15842336	chr8:15842336:G:A	rs2205233	G	A	A	Hoxc9_MA0485.1	12	1	+	9.302530872788408	9.176850515954937	ATCTATAAATCAG
chr8	16149885	16149886	chr8:16149886:A:C	rs351554	A	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	16383269	16383270	chr8:16383270:A:T	rs80274192	A	T	A	Hoxc9_MA0485.1	8	1	+	7.235267611646212	0.33330910151125254	GGCCACAAATTAC
chr8	16499680	16499681	chr8:16499681:T:C	rs1830139	T	C	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	16759906	16759907	chr8:16759907:C:A	rs13252764	C	A	a	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	17363491	17363492	chr8:17363492:C:T	rs8180986	C	T	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	17474912	17474913	chr8:17474913:A:G	rs2588249	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	17529344	17529345	chr8:17529345:A:G	rs2588222	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	17538905	17538906	chr8:17538906:G:A	chr8:17538906:G:A	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	17538905	17538906	chr8:17538906:G:C	rs13259978	G	C	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	17610345	17610346	chr8:17610346:G:A	rs2517202	G	A	A	Hoxc9_MA0485.1	12	1	+	8.13779379091195	8.01211343407848	ATCCATAAATCCG
chr8	17662989	17662990	chr8:17662990:A:G	rs76912134	A	G	A	Hoxc9_MA0485.1	4	1	+	8.700093152847806	7.532329438856222	TGCAATGAATCAC
chr8	17721625	17721626	chr8:17721626:C:T	rs6982255	C	T	c	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	17793137	17793138	chr8:17793138:T:C	rs117638499	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	17836334	17836335	chr8:17836335:T:C	rs7017785	T	C	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	17858111	17858112	chr8:17858112:G:A	rs7012297	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr8	18072925	18072926	chr8:18072926:C:T	rs7387072	C	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	18076519	18076520	chr8:18076520:T:C	rs7462991	T	C	T	Hoxc9_MA0485.1	1	1	-	8.479492530107262	10.038936104017322	AATCATAAATCTG
chr8	18219322	18219323	chr8:18219323:C:G	rs28359523	C	G	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	18239150	18239151	chr8:18239151:C:A	rs6999439	C	A	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	18533086	18533087	chr8:18533087:C:G	rs575911941	C	G	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	18580939	18580940	chr8:18580940:T:C	rs80207364	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	18676598	18676599	chr8:18676599:A:G	rs11774205	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	18821194	18821195	chr8:18821195:T:G	rs1022758	T	G	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	18870438	18870439	chr8:18870439:A:G	rs3758141	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	19036803	19036804	chr8:19036804:T:A	rs898460497	T	A	T	Hoxc9_MA0485.1	5	1	+	7.660383648437459	0.7618406727178629	GGTAATGAATCAG
chr8	19047128	19047129	chr8:19047129:A:G	rs146030564	A	G	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	19106112	19106113	chr8:19106113:G:T	rs10091443	G	T	T	Hoxc9_MA0485.1	1	1	+	8.197520821082486	6.114760500505947	TGGCATAAATCTG
chr8	19135741	19135742	chr8:19135742:A:T	rs112011071	A	T	A	Hoxc9_MA0485.1	8	1	+	7.956698748862752	1.0547402387277909	TGCCTTAAATCAA
chr8	19151848	19151849	chr8:19151849:G:A	rs118060632	G	A	G	Hoxc9_MA0485.1	20	0	+	0	0	.
chr8	19171633	19171634	chr8:19171634:T:C	rs596532	T	C	t	Hoxc9_MA0485.1	5	1	+	8.158590900675463	3.6732795380369763	AGATGTAAATCTC
chr8	19184129	19184130	chr8:19184130:G:T	rs28576774	G	T	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	19192945	19192946	chr8:19192946:G:A	rs545684774	G	A	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	19198869	19198870	chr8:19198870:C:G	rs73667611	C	G	C	Hoxc9_MA0485.1	11	1	+	8.254609556529418	5.89506601256013	AGCCATAAATACC
chr8	19286566	19286567	chr8:19286567:G:C	rs111249230	G	C	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	19307018	19307019	chr8:19307019:G:A	rs1193304	G	A	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	19356623	19356624	chr8:19356624:T:C	rs76264228	T	C	T	Hoxc9_MA0485.1	9	1	+	8.179812740389659	1.291586926016028	GGCAATGAATCTG
chr8	19414121	19414122	chr8:19414122:T:C	rs185026745	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	19414156	19414157	chr8:19414157:C:G	rs4541947	C	G	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	19511185	19511186	chr8:19511186:C:A	rs4921656	C	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	19688019	19688020	chr8:19688020:A:G	rs115638832	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr8	20076655	20076656	chr8:20076656:T:C	rs76311192	T	C	T	Hoxc9_MA0485.1	12	1	+	8.295879719600515	8.549876673365068	TGCTATCAATCTT
chr8	20111852	20111853	chr8:20111853:T:A	rs11204090	T	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	20114856	20114857	chr8:20114857:C:T	rs1039122	C	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	20115138	20115139	chr8:20115139:C:G	rs1039121	C	G	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	20430458	20430459	chr8:20430459:G:A	rs7845281	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	20509930	20509931	chr8:20509931:G:T	rs11774241	G	T	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	20531014	20531015	chr8:20531015:T:C	rs4922214	T	C	T	Hoxc9_MA0485.1	12	1	+	8.399916541782808	8.65391349554736	GTCAATAAATCCT
chr8	20691305	20691306	chr8:20691306:A:G	rs7839655	A	G	A	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	20736503	20736504	chr8:20736504:C:G	rs2616176	C	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	20774234	20774235	chr8:20774235:C:T	rs2597416	C	T	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	20914192	20914193	chr8:20914193:C:T	rs17093353	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	21036875	21036876	chr8:21036876:C:T	rs77742551	C	T	C	Hoxc9_MA0485.1	11	1	+	6.524021462434303	7.719421932124361	GGCTGTCAATCCG
chr8	21036891	21036892	chr8:21036892:T:C	rs1521457	T	C	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	21094141	21094142	chr8:21094142:T:G	rs75796267	T	G	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	21281195	21281196	chr8:21281196:C:A	rs10110590	C	A	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	21340315	21340316	chr8:21340316:G:A	rs6988569	G	A	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	21642425	21642426	chr8:21642426:T:C	rs1282815744	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	22198299	22198300	chr8:22198300:G:T	rs73225867	G	T	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	22216117	22216118	chr8:22216118:A:C	rs7845248	A	C	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	22336249	22336250	chr8:22336250:A:G	rs532252945	A	G	a	Hoxc9_MA0485.1	19	0	+	0	0	.
chr8	22336254	22336255	chr8:22336255:T:C	rs115898118	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	22354242	22354243	chr8:22354243:T:A	rs66554545	T	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	22401461	22401462	chr8:22401462:A:G	rs73544036	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	22401483	22401484	chr8:22401484:A:G	rs548692799	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	22796414	22796415	chr8:22796415:A:C	rs55756959	A	C	A	Hoxc9_MA0485.1	3	1	+	7.997434273505186	8.732185481075653	CTCAGTAAATCAT
chr8	22798700	22798701	chr8:22798701:C:T	rs59386421	C	T	T	Hoxc9_MA0485.1	3	1	+	8.526232314734585	7.637979541711963	GTCCATAAATTTT
chr8	22918341	22918342	chr8:22918342:G:A	rs10503722	G	A	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	23069000	23069001	chr8:23069001:C:G	rs576864679	C	G	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr8	23134440	23134441	chr8:23134441:A:G	rs55976000	A	G	A	Hoxc9_MA0485.1	4	1	+	11.415954581178546	10.248190867186963	AGCCATAAATCTG
chr8	23162140	23162141	chr8:23162141:T:C	rs7463799	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr8	23244571	23244572	chr8:23244572:T:A	rs11135710	T	A	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	23275899	23275900	chr8:23275900:T:C	rs7818295	T	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	23315539	23315540	chr8:23315540:A:G	rs4273857	A	G	A	Hoxc9_MA0485.1	4	1	+	9.095481783225777	7.927718069234192	TCTCATAAATCTC
chr8	23335093	23335094	chr8:23335094:G:A	rs6994800	G	A	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	23350752	23350753	chr8:23350753:T:C	rs56065531	T	C	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	23425437	23425438	chr8:23425438:A:G	rs11779953	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	23828314	23828315	chr8:23828315:A:T	rs310326	A	T	A	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	23850655	23850656	chr8:23850656:G:A	rs77260821	G	A	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	23850671	23850672	chr8:23850672:C:T	rs118170086	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	24194452	24194453	chr8:24194453:T:G	rs4871913	T	G	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	24252689	24252690	chr8:24252690:G:C	rs11135786	G	C	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	24727072	24727073	chr8:24727073:C:T	rs191043394	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	24996328	24996329	chr8:24996329:A:C	rs13264292	A	C	A	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	25073651	25073652	chr8:25073652:C:T	rs138357403	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	25179823	25179824	chr8:25179824:G:C	rs186607244	G	C	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	25385455	25385456	chr8:25385456:T:C	rs925032	T	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	25455702	25455703	chr8:25455703:G:A	rs11987149	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	25922119	25922120	chr8:25922120:C:G	rs4872378	C	G	C	Hoxc9_MA0485.1	2	1	+	10.612033866681143	7.916149724959836	TCCCATAAATCAG
chr8	25962788	25962789	chr8:25962789:C:A	rs1048755902	C	A	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	26103226	26103227	chr8:26103227:T:A	rs4872408	T	A	A	Hoxc9_MA0485.1	7	1	-	8.444941487579385	3.2490902786628113	ATCTATAAATCTG
chr8	26222307	26222308	chr8:26222308:C:T	rs6980989	C	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	26222339	26222340	chr8:26222340:C:A	rs6981012	C	A	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	26332034	26332035	chr8:26332035:C:G	rs17247304	C	G	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	26481891	26481892	chr8:26481892:G:C	rs6983091	G	C	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	27016636	27016637	chr8:27016637:A:T	rs2322409	A	T	a	Hoxc9_MA0485.1	9	1	-	8.543555958912803	4.715913390412778	GGTAGTAAATCTA
chr8	27299700	27299701	chr8:27299701:G:A	rs567207103	G	A	a	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	27331301	27331302	chr8:27331302:C:A	rs36057699	C	A	c	Hoxc9_MA0485.1	27	0	-	0	0	.
chr8	27404848	27404849	chr8:27404849:C:G	rs1367089	C	G	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	27411170	27411171	chr8:27411171:G:T	rs3757907	G	T	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	27412366	27412367	chr8:27412367:G:T	rs11775958	G	T	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	27594526	27594527	chr8:27594527:T:G	rs7821500	T	G	G	Hoxc9_MA0485.1	5	1	+	7.685264545313772	0.7867215695941749	GGCAATAACTCAT
chr8	27633280	27633281	chr8:27633281:G:A	rs116083769	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	27633282	27633283	chr8:27633283:G:A	rs77130969	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr8	27724129	27724130	chr8:27724130:A:T	rs117235380	A	T	a	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	27772725	27772726	chr8:27772726:T:C	rs35767880	T	C	T	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	27892053	27892054	chr8:27892054:T:C	rs1879676	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	28203751	28203752	chr8:28203752:A:G	rs73228824	A	G	a	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	28261742	28261743	chr8:28261743:C:T	rs2722887	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	28268978	28268979	chr8:28268979:C:G	rs6985484	C	G	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	28268983	28268984	chr8:28268984:A:C	rs7005115	A	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	28490303	28490304	chr8:28490304:A:G	rs1033646412	A	G	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	28490328	28490329	chr8:28490329:G:A	rs139995460	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr8	28600974	28600975	chr8:28600975:A:C	rs111241309	A	C	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	28632680	28632681	chr8:28632681:A:G	rs56080353	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	28632700	28632701	chr8:28632701:C:T	rs10088798	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	28730787	28730788	chr8:28730788:C:G	rs904217359	C	G	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	28829404	28829405	chr8:28829405:A:G	rs1447284891	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	28848912	28848913	chr8:28848913:A:C	chr8:28848913:A:C	A	C	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	29402621	29402622	chr8:29402622:G:A	rs4732939	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	29522448	29522449	chr8:29522449:C:G	rs145423391	C	G	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	29669822	29669823	chr8:29669823:C:A	rs12546747	C	A	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	29723306	29723307	chr8:29723307:A:G	rs60206381	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	29787754	29787755	chr8:29787755:A:G	rs73568248	A	G	A	Hoxc9_MA0485.1	12	1	-	9.699074214670247	9.9530711684348	TCTCATAAATCAT
chr8	29804413	29804414	chr8:29804414:A:G	rs1016283818	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	29932342	29932343	chr8:29932343:C:T	rs7841598	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	29987948	29987949	chr8:29987949:T:G	rs4428059	T	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	30068751	30068752	chr8:30068752:G:A	rs56764161	G	A	g	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	30140578	30140579	chr8:30140579:C:G	rs12678118	C	G	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	30189226	30189227	chr8:30189227:C:G	rs968273209	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	30446316	30446317	chr8:30446317:A:C	rs4416792	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	30784431	30784432	chr8:30784432:T:G	rs4733509	T	G	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	30804690	30804691	chr8:30804691:T:C	rs1021824228	T	C	T	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	30805215	30805216	chr8:30805216:T:A	rs56267947	T	A	T	Hoxc9_MA0485.1	11	1	+	8.063422187106722	8.921011572315745	GGACATAAATATC
chr8	31286255	31286256	chr8:31286256:G:A	rs78913979	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	31454088	31454089	chr8:31454089:A:G	rs184415630	A	G	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr8	32221584	32221585	chr8:32221585:C:T	rs1383965	C	T	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	32331886	32331887	chr8:32331887:T:C	rs147881091	T	C	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	32440663	32440664	chr8:32440664:G:C	rs1579033	G	C	G	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	32563868	32563869	chr8:32563869:A:G	rs73234147	A	G	A	Hoxc9_MA0485.1	5	1	-	10.248295514018123	5.762984151379638	TGTCATAAATCAA
chr8	32568224	32568225	chr8:32568225:C:G	rs4733132	C	G	C	Hoxc9_MA0485.1	3	1	+	9.819673510289244	4.303277038303554	CACCATAAATCTC
chr8	32662952	32662953	chr8:32662953:G:A	rs2439322	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	32738553	32738554	chr8:32738554:T:G	rs10216730	T	G	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	32838127	32838128	chr8:32838128:T:C	rs4733385	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	33574751	33574752	chr8:33574752:A:G	rs187200200	A	G	A	Hoxc9_MA0485.1	7	1	+	10.622712580383652	3.718483511178076	TGCAATAAATCTT
chr8	34398480	34398481	chr8:34398481:A:G	rs76083813	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	34423475	34423476	chr8:34423476:G:C	rs1014493	G	C	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	34657054	34657055	chr8:34657055:A:T	rs7004471	A	T	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	34984897	34984898	chr8:34984898:T:C	rs11782611	T	C	T	Hoxc9_MA0485.1	27	0	-	0	0	.
chr8	34984926	34984927	chr8:34984927:T:C	rs79201197	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	35105690	35105691	chr8:35105691:G:A	rs2122815	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	35249219	35249220	chr8:35249220:A:G	rs13279514	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	36976341	36976342	chr8:36976342:T:G	rs3015786	T	G	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	37099791	37099792	chr8:37099792:G:A	rs16885903	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	37139036	37139037	chr8:37139037:C:T	rs1518505	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	37147897	37147898	chr8:37147898:T:C	rs17405160	T	C	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	37151431	37151432	chr8:37151432:T:C	rs140578138	T	C	T	Hoxc9_MA0485.1	9	1	+	7.650665623983683	0.7624398096100504	AGCTGTCAATCTT
chr8	37326167	37326168	chr8:37326168:C:T	rs446276	C	T	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	37353995	37353996	chr8:37353996:C:T	rs239462	C	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	37452525	37452526	chr8:37452526:A:G	rs78932743	A	G	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	37480305	37480306	chr8:37480306:C:T	rs10504008	C	T	T	Hoxc9_MA0485.1	0	1	-	8.667014618551192	8.13419948526019	GGACATAAATAAT
chr8	37525163	37525164	chr8:37525164:G:C	rs1183311667	G	C	G	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	37539908	37539909	chr8:37539909:T:C	rs75348464	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr8	37570015	37570016	chr8:37570016:G:T	rs73675858	G	T	G	Hoxc9_MA0485.1	6	1	+	8.815144252005851	8.320625552977754	AGCTATGAATCAT
chr8	37606299	37606300	chr8:37606300:A:G	rs73590909	A	G	A	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	37638167	37638168	chr8:37638168:G:A	rs149047481	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	37727365	37727366	chr8:37727366:C:A	rs117052561	C	A	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	37822704	37822705	chr8:37822705:A:G	rs60659074	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	38037140	38037141	chr8:38037141:C:A	rs115677666	C	A	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	38088023	38088024	chr8:38088024:G:A	rs75893388	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	38088247	38088248	chr8:38088248:G:A	rs28889710	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	38601870	38601871	chr8:38601871:A:G	rs78338564	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	38732600	38732601	chr8:38732601:T:C	rs552523063	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	38761249	38761250	chr8:38761250:T:G	rs7016882	T	G	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr8	38928537	38928538	chr8:38928538:C:T	rs73615965	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	38993065	38993066	chr8:38993066:A:C	rs4733897	A	C	A	Hoxc9_MA0485.1	5	1	-	9.072357660902494	2.1738146851829003	AGATATAAATCTT
chr8	39000758	39000759	chr8:39000759:A:G	rs9298649	A	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	39487304	39487305	chr8:39487305:A:G	rs78530007	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr8	39487312	39487313	chr8:39487313:A:C	rs182020987	A	C	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	39487324	39487325	chr8:39487325:T:C	rs73616491	T	C	C	Hoxc9_MA0485.1	9	1	+	8.284455710429143	1.3962298960555106	AGAAATAAATCCC
chr8	39533296	39533297	chr8:39533297:C:T	rs67882526	C	T	.	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	39581998	39581999	chr8:39581999:T:C	rs10108019	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	39941387	39941388	chr8:39941388:T:C	rs188975331	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	39942774	39942775	chr8:39942775:G:A	rs34137953	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	39944039	39944040	chr8:39944040:G:A	rs558697411	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	39964359	39964360	chr8:39964360:G:A	rs2729461	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	40066836	40066837	chr8:40066837:T:C	rs1481063	T	C	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	40067095	40067096	chr8:40067096:T:A	rs28427344	T	A	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	40086133	40086134	chr8:40086134:C:T	rs76997901	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	40086162	40086163	chr8:40086163:T:C	rs16888738	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	40099944	40099945	chr8:40099945:T:C	rs72633023	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	40169209	40169210	chr8:40169210:A:G	rs77281740	A	G	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	40199713	40199714	chr8:40199714:C:T	rs10104001	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	40207551	40207552	chr8:40207552:A:G	rs10100979	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	40230915	40230916	chr8:40230916:A:G	rs140389985	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	40698332	40698333	chr8:40698333:A:G	rs7012695	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	40731181	40731182	chr8:40731182:G:T	rs10958632	G	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	40733827	40733828	chr8:40733828:A:G	rs62497412	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	40946158	40946159	chr8:40946159:G:A	rs78272851	G	A	g	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	40984573	40984574	chr8:40984574:C:T	rs77578639	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	41119208	41119209	chr8:41119209:A:G	rs7815747	A	G	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	41185578	41185579	chr8:41185579:C:G	rs59136120	C	G	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr8	41235770	41235771	chr8:41235771:T:C	rs191211631	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	41250039	41250040	chr8:41250040:T:C	rs10441601	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	41455220	41455221	chr8:41455221:C:A	rs7001285	C	A	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	41630197	41630198	chr8:41630198:T:C	rs12544111	T	C	T	Hoxc9_MA0485.1	11	1	-	9.075887919520667	4.663354520652299	GTTAATAAATCAT
chr8	41713223	41713224	chr8:41713224:C:T	rs763579018	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	41789164	41789165	chr8:41789165:A:C	rs11995974	A	C	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	42568156	42568157	chr8:42568157:A:G	rs2084710	A	G	A	Hoxc9_MA0485.1	5	1	-	8.830925348954224	4.345613986315739	CACAATAAATCTT
chr8	42574793	42574794	chr8:42574794:T:G	rs2923441	T	G	G	Hoxc9_MA0485.1	8	1	-	8.49037000008783	3.639967828143172	GGCTATGAATCTT
chr8	42682986	42682987	chr8:42682987:A:C	rs112185955	A	C	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	42909988	42909989	chr8:42909989:G:A	rs1625050	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr8	43052290	43052291	chr8:43052291:C:G	rs77974391	C	G	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	43163214	43163215	chr8:43163215:C:A	rs117784838	C	A	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr8	43553517	43553518	chr8:43553518:T:C	rs11987431	T	C	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	43557901	43557902	chr8:43557902:T:C	rs147406553	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	46145994	46145995	chr8:46145995:C:T	rs114503575	C	T	.	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	46146285	46146286	chr8:46146286:G:C	rs573018755	G	C	.	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	46146312	46146313	chr8:46146313:G:T	rs142086807	G	T	.	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	46253550	46253551	chr8:46253551:G:A	rs4873063	G	A	.	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	46341940	46341941	chr8:46341941:G:T	rs117860619	G	T	.	Hoxc9_MA0485.1	0	1	+	9.415408536680161	8.360043785014408	GGCTGTAAATCCC
chr8	47179272	47179273	chr8:47179273:A:G	rs12550067	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	48648352	48648353	chr8:48648353:G:C	rs11993617	G	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	48748501	48748502	chr8:48748502:A:C	rs77579126	A	C	a	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	49093198	49093199	chr8:49093199:T:C	rs341829	T	C	T	Hoxc9_MA0485.1	7	1	-	8.055129341819361	1.1509002726137822	AGACATCAATCAA
chr8	49398239	49398240	chr8:49398240:G:T	rs7836383	G	T	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	49481496	49481497	chr8:49481497:G:C	rs13269976	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	49691930	49691931	chr8:49691931:A:G	rs10504084	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	50000054	50000055	chr8:50000055:C:A	rs10957737	C	A	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	50039844	50039845	chr8:50039845:A:G	rs72639853	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr8	50070036	50070037	chr8:50070037:G:A	rs203940	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	50172170	50172171	chr8:50172171:C:T	rs4873128	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	50905200	50905201	chr8:50905201:C:G	rs1385044	C	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr8	51059632	51059633	chr8:51059633:A:G	rs62508520	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	51396014	51396015	chr8:51396015:A:G	rs2977008	A	G	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	51713782	51713783	chr8:51713783:G:T	rs75174876	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	51930319	51930320	chr8:51930320:G:A	rs17284746	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	52146881	52146882	chr8:52146882:C:T	rs78815764	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	52146925	52146926	chr8:52146926:G:A	rs3891723	G	A	G	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	52249640	52249641	chr8:52249641:A:T	rs16917562	A	T	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	52255821	52255822	chr8:52255822:T:G	rs7842486	T	G	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	52391463	52391464	chr8:52391464:C:T	rs35361856	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	52628885	52628886	chr8:52628886:G:A	rs35085480	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	53032534	53032535	chr8:53032535:C:A	rs57772121	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	53344406	53344407	chr8:53344407:C:T	rs77941516	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	54338762	54338763	chr8:54338763:G:A	rs8181030	G	A	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	54363522	54363523	chr8:54363523:A:G	rs1979915	A	G	a	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	54573094	54573095	chr8:54573095:A:T	rs11787436	A	T	A	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	55058136	55058137	chr8:55058137:T:G	rs2726426	T	G	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	55237808	55237809	chr8:55237809:G:A	rs7462267	G	A	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	55687217	55687218	chr8:55687218:G:A	rs4738393	G	A	g	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	55970577	55970578	chr8:55970578:G:A	rs17812274	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	56101779	56101780	chr8:56101780:C:T	chr8:56101780:C:T	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	56388413	56388414	chr8:56388414:G:A	rs17760057	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	56454291	56454292	chr8:56454292:T:G	rs28622985	T	G	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	56454302	56454303	chr8:56454303:A:G	rs34079032	A	G	A	Hoxc9_MA0485.1	9	1	+	9.696772310093424	6.636189064219816	GGCCATAAAACAC
chr8	56587277	56587278	chr8:56587278:T:C	rs1440749	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	56653304	56653305	chr8:56653305:C:T	rs12679072	C	T	c	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	56682395	56682396	chr8:56682396:G:A	rs75523753	G	A	A	Hoxc9_MA0485.1	12	1	-	10.273684712530084	10.019687758765532	GCTAATAAATCAC
chr8	56785930	56785931	chr8:56785931:G:T	rs353727	G	T	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	56821020	56821021	chr8:56821021:C:T	chr8:56821021:C:T	C	T	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	56924336	56924337	chr8:56924337:T:C	rs35775010	T	C	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr8	57013836	57013837	chr8:57013837:C:G	rs56821966	C	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	57434008	57434009	chr8:57434009:G:A	rs10090952	G	A	G	Hoxc9_MA0485.1	2	1	-	7.743632922057486	6.366614444896262	ACCTGTAAATCCC
chr8	57537919	57537920	chr8:57537920:A:G	rs76551793	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	57564502	57564503	chr8:57564503:G:T	rs56218904	G	T	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	57577454	57577455	chr8:57577455:C:T	rs16922339	C	T	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	57588123	57588124	chr8:57588124:G:A	rs73603723	G	A	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	57751933	57751934	chr8:57751934:A:G	rs150074019	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	57751963	57751964	chr8:57751964:C:T	rs9693544	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr8	57751968	57751969	chr8:57751969:A:G	rs7017146	A	G	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	57841424	57841425	chr8:57841425:C:T	rs184335208	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	58195903	58195904	chr8:58195904:T:C	rs149466980	T	C	T	Hoxc9_MA0485.1	0	1	-	9.316498831946419	9.84931396523742	ATCAATAAATCTC
chr8	58244324	58244325	chr8:58244325:T:C	rs78710358	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	58281753	58281754	chr8:58281754:G:A	rs13249339	G	A	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr8	58414275	58414276	chr8:58414276:T:C	rs7829017	T	C	T	Hoxc9_MA0485.1	4	1	-	8.083682289890884	6.9159185758993	ACCAATGAATCAC
chr8	59137938	59137939	chr8:59137939:G:A	rs3122648	G	A	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	59761477	59761478	chr8:59761478:A:T	rs2326443	A	T	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	59767462	59767463	chr8:59767463:C:T	rs1511027	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	60053062	60053063	chr8:60053063:T:A	rs77331462	T	A	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	60255048	60255049	chr8:60255049:A:G	rs6996114	A	G	A	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	60503110	60503111	chr8:60503111:A:T	rs73257441	A	T	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr8	60808010	60808011	chr8:60808011:G:A	chr8:60808011:G:A	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	60910658	60910659	chr8:60910659:G:A	rs62525901	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	61312323	61312324	chr8:61312324:C:G	rs186308620	C	G	C	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	61453512	61453513	chr8:61453513:A:G	rs6992756	A	G	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	61653109	61653110	chr8:61653110:G:T	rs12677072	G	T	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	61734193	61734194	chr8:61734194:A:G	rs62505988	A	G	A	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	62024327	62024328	chr8:62024328:A:T	rs79770002	A	T	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	62203363	62203364	chr8:62203364:A:G	rs10106864	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	62431770	62431771	chr8:62431771:T:A	rs72651505	T	A	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	62488008	62488009	chr8:62488009:C:T	rs10091239	C	T	T	Hoxc9_MA0485.1	4	1	-	8.37447917828482	9.542242892276404	ACCAGTAAATCTG
chr8	62617866	62617867	chr8:62617867:G:A	rs1871590	G	A	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	63950601	63950602	chr8:63950602:G:T	rs779253929	G	T	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	64237704	64237705	chr8:64237705:G:C	rs60726853	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	64363646	64363647	chr8:64363647:G:T	rs298193	G	T	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	65224940	65224941	chr8:65224941:A:G	rs10283265	A	G	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	65669322	65669323	chr8:65669323:C:G	rs1043557607	C	G	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	65926234	65926235	chr8:65926235:C:A	rs6999945	C	A	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	65954745	65954746	chr8:65954746:A:T	rs10216874	A	T	A	Hoxc9_MA0485.1	7	1	+	8.298124506969607	3.1022732980530328	AGATGTAAATCAG
chr8	65960839	65960840	chr8:65960840:A:G	rs56665861	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	66179143	66179144	chr8:66179144:A:G	rs3176921	A	G	G	Hoxc9_MA0485.1	8	1	+	10.793113804482285	3.891155294347327	GCCAATAAATCTC
chr8	66186501	66186502	chr8:66186502:A:C	rs1870393	A	C	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	66284144	66284145	chr8:66284145:A:G	rs76056996	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	66431769	66431770	chr8:66431770:G:T	rs35352031	G	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	66517568	66517569	chr8:66517569:G:A	rs554325973	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	67060767	67060768	chr8:67060768:A:G	rs78588671	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	68094566	68094567	chr8:68094567:T:C	rs13262561	T	C	T	Hoxc9_MA0485.1	19	0	+	0	0	.
chr8	68203276	68203277	chr8:68203277:T:C	rs7838512	T	C	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	68219797	68219798	chr8:68219798:G:A	rs1404598	G	A	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	68369269	68369270	chr8:68369270:G:A	rs7001418	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	68391833	68391834	chr8:68391834:C:T	rs2243700	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	68768033	68768034	chr8:68768034:A:G	rs2953969	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	68783707	68783708	chr8:68783708:G:A	rs143736862	G	A	G	Hoxc9_MA0485.1	10	1	-	8.055129341819361	6.25129343751061	AGACATCAATCAA
chr8	68789896	68789897	chr8:68789897:G:C	rs73270258	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	68887416	68887417	chr8:68887417:A:G	chr8:68887417:A:G	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	68887933	68887934	chr8:68887934:C:G	rs7825981	C	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	68916853	68916854	chr8:68916854:C:G	rs113895599	C	G	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	69061765	69061766	chr8:69061766:C:A	rs2217103	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	69372042	69372043	chr8:69372043:G:A	rs4737964	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	69396882	69396883	chr8:69396883:A:C	chr8:69396883:A:C	A	C	A	Hoxc9_MA0485.1	5	1	-	8.806973102061468	1.9084301263418741	GGCTGTAAATTTC
chr8	69965481	69965482	chr8:69965482:G:A	rs72662059	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	69994675	69994676	chr8:69994676:G:A	rs374200332	G	A	G	Hoxc9_MA0485.1	2	1	-	9.285142682690307	7.9081242055290835	GTCAGTAAATCAT
chr8	70088856	70088857	chr8:70088857:T:G	rs79721546	T	G	T	Hoxc9_MA0485.1	9	1	+	11.945927535274631	5.057701720901	GGCAATAAATCAA
chr8	70188436	70188437	chr8:70188437:A:C	rs73684215	A	C	C	Hoxc9_MA0485.1	7	1	+	9.318851250093477	2.4146221808878994	AGCAATAAATAAT
chr8	70401854	70401855	chr8:70401855:A:G	rs149261640	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	71115511	71115512	chr8:71115512:G:A	rs6981760	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	71176481	71176482	chr8:71176482:C:G	rs6997975	C	G	G	Hoxc9_MA0485.1	0	1	-	8.234363654171467	6.946655244986345	GCTTGTAAATCAG
chr8	71561655	71561656	chr8:71561656:T:A	rs1424864	T	A	A	Hoxc9_MA0485.1	2	1	+	10.008272716203722	9.46588822096119	AGTTATAAATCAG
chr8	71606938	71606939	chr8:71606939:A:C	rs1544844	A	C	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	71774807	71774808	chr8:71774808:G:A	rs7004854	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	71797987	71797988	chr8:71797988:G:A	rs61537190	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	71830666	71830667	chr8:71830667:T:A	rs10113854	T	A	T	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	71907177	71907178	chr8:71907178:G:T	chr8:71907178:G:T	G	T	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	72465722	72465723	chr8:72465723:C:T	rs7812629	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	72833809	72833810	chr8:72833810:T:G	rs1440368	T	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	72866406	72866407	chr8:72866407:G:A	rs10504543	G	A	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	72925206	72925207	chr8:72925207:G:A	rs12678022	G	A	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr8	72986931	72986932	chr8:72986932:G:C	rs10105282	G	C	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	73312822	73312823	chr8:73312823:G:C	rs13261390	G	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	73387006	73387007	chr8:73387007:T:C	rs7832342	T	C	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	73553678	73553679	chr8:73553679:G:C	rs117733718	G	C	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	74199607	74199608	chr8:74199608:T:A	rs2956056	T	A	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	74813330	74813331	chr8:74813331:G:A	rs182822549	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	74828995	74828996	chr8:74828996:T:C	rs16938971	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	74829027	74829028	chr8:74829028:T:C	rs17358302	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	75081711	75081712	chr8:75081712:A:G	rs186276000	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	75575392	75575393	chr8:75575393:A:G	rs2941492	A	G	G	Hoxc9_MA0485.1	4	1	+	9.531052839289195	8.36328912529761	TGCCATAAATAAT
chr8	76170924	76170925	chr8:76170925:C:T	rs4087982	C	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	77026738	77026739	chr8:77026739:G:A	rs112616781	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	77188066	77188067	chr8:77188067:G:A	rs1452803	G	A	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	77451309	77451310	chr8:77451310:C:T	rs79852833	C	T	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	78595892	78595893	chr8:78595893:A:G	rs117992024	A	G	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	78643912	78643913	chr8:78643913:T:C	rs4739134	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	78807294	78807295	chr8:78807295:T:C	rs72666876	T	C	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	78851324	78851325	chr8:78851325:T:C	rs77053356	T	C	T	Hoxc9_MA0485.1	8	1	-	7.3788278734040675	0.4768693632691083	TGCTGTGAATCAC
chr8	79076825	79076826	chr8:79076826:G:A	rs10504691	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	79356441	79356442	chr8:79356442:T:G	rs10957930	T	G	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	79692993	79692994	chr8:79692994:G:C	rs79187149	G	C	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	79962902	79962903	chr8:79962903:T:C	rs73251953	T	C	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	80079987	80079988	chr8:80079988:T:C	rs7016153	T	C	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	80084390	80084391	chr8:80084391:T:C	rs7004041	T	C	c	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	80107946	80107947	chr8:80107947:T:C	rs4740110	T	C	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	80110423	80110424	chr8:80110424:C:A	rs10957958	C	A	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	80209915	80209916	chr8:80209916:C:T	rs72603860	C	T	C	Hoxc9_MA0485.1	0	1	+	7.299985781336853	7.532329438856222	CGCAGTGAATCAC
chr8	80682215	80682216	chr8:80682216:A:G	rs7829424	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	81014379	81014380	chr8:81014380:T:C	rs77839940	T	C	t	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	81171726	81171727	chr8:81171727:T:C	rs115439339	T	C	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	81227729	81227730	chr8:81227730:C:G	rs73265678	C	G	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr8	81332990	81332991	chr8:81332991:C:T	rs1566558	C	T	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	81346575	81346576	chr8:81346576:G:C	rs28493739	G	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr8	81346598	81346599	chr8:81346599:T:G	rs28451546	T	G	G	Hoxc9_MA0485.1	6	1	-	7.618647954983037	5.445316659652053	TGCCATAACTCAC
chr8	81348233	81348234	chr8:81348234:G:A	rs80240361	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	81348247	81348248	chr8:81348248:G:C	rs7003023	G	C	C	Hoxc9_MA0485.1	10	1	-	10.010395503636252	5.2093246958889745	AACCGTAAATCAT
chr8	82740648	82740649	chr8:82740649:G:T	rs74977565	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	82788894	82788895	chr8:82788895:G:A	rs9643765	G	A	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	82854146	82854147	chr8:82854147:C:T	rs1525331	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	84184307	84184308	chr8:84184308:A:T	rs7815593	A	T	.	Hoxc9_MA0485.1	8	1	+	9.086246138336723	2.184287628201763	CCCCGTAAATCAA
chr8	84427937	84427938	chr8:84427938:C:A	rs16912815	C	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	84456550	84456551	chr8:84456551:A:G	rs1479093	A	G	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	84456568	84456569	chr8:84456569:T:A	rs1479094	T	A	T	Hoxc9_MA0485.1	4	1	-	7.942017376838948	4.2734021345223505	GACAATGAATCAT
chr8	84488135	84488136	chr8:84488136:C:T	rs7834473	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	84519442	84519443	chr8:84519443:C:T	rs13269377	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	84648597	84648598	chr8:84648598:C:T	rs4416819	C	T	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	85106622	85106623	chr8:85106623:C:G	rs113697361	C	G	c	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	85106671	85106672	chr8:85106672:C:T	chr8:85106672:C:T	C	T	c	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	85474832	85474833	chr8:85474833:A:G	rs77139490	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr8	85632549	85632550	chr8:85632550:G:A	rs116073670	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	85993360	85993361	chr8:85993361:C:T	rs172257	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	86265345	86265346	chr8:86265346:G:A	rs4425734	G	A	g	Hoxc9_MA0485.1	31	0	+	0	0	.
chr8	86678519	86678520	chr8:86678520:G:C	rs970633	G	C	c	Hoxc9_MA0485.1	12	1	-	7.553747061012744	6.835691282097867	GATCATGAATCAC
chr8	86701450	86701451	chr8:86701451:G:A	rs189281836	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	87413565	87413566	chr8:87413566:A:G	rs13257198	A	G	A	Hoxc9_MA0485.1	9	1	-	8.72911206810968	1.8408862537360482	AGCAATAAATAAA
chr8	87861186	87861187	chr8:87861187:T:C	rs117211157	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr8	88261899	88261900	chr8:88261900:T:A	rs148895107	T	A	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	88422871	88422872	chr8:88422872:C:G	rs61109805	C	G	g	Hoxc9_MA0485.1	1	1	+	7.902506406390399	9.041466887722072	CCCTATAAATCCT
chr8	88520502	88520503	chr8:88520503:A:C	rs11997591	A	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	88773635	88773636	chr8:88773636:T:C	rs1603788	T	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	88942361	88942362	chr8:88942362:T:A	rs7010070	T	A	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr8	89083503	89083504	chr8:89083504:A:G	rs1681433	A	G	a	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	89535014	89535015	chr8:89535015:A:G	rs79978376	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr8	89858736	89858737	chr8:89858737:A:G	rs1017719089	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr8	89919478	89919479	chr8:89919479:A:G	rs80268568	A	G	A	Hoxc9_MA0485.1	4	1	+	9.410686673192268	8.242922959200683	TCACATAAATCAC
chr8	89950999	89951000	chr8:89951000:A:C	rs751907501	A	C	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	90165610	90165611	chr8:90165611:A:G	rs16904017	A	G	A	Hoxc9_MA0485.1	4	1	+	9.716944397898565	8.549180683906982	GGGCATAAATCTT
chr8	90594381	90594382	chr8:90594382:T:C	rs7016094	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	90630541	90630542	chr8:90630542:G:T	rs11998346	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr8	90665697	90665698	chr8:90665698:G:A	rs4332092	G	A	A	Hoxc9_MA0485.1	1	1	-	10.379690209161776	9.435890369916912	CCCCATAAATCAG
chr8	91042064	91042065	chr8:91042065:C:T	rs12386850	C	T	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	91128199	91128200	chr8:91128200:G:A	rs4577919	G	A	G	Hoxc9_MA0485.1	3	1	-	8.594390082623766	7.706137309601144	AGGCATAAATCTA
chr8	91337660	91337661	chr8:91337661:T:C	rs10095567	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	91626905	91626906	chr8:91626906:A:G	rs10094543	A	G	A	Hoxc9_MA0485.1	6	1	+	8.456508282588695	5.422302516079275	CATCATAAATCAA
chr8	92017994	92017995	chr8:92017995:A:C	chr8:92017995:A:C	A	C	A	Hoxc9_MA0485.1	2	1	-	8.642234976166101	7.323369311606018	GGTCATAAATTTA
chr8	93132150	93132151	chr8:93132151:A:G	chr8:93132151:A:G	A	G	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	93248758	93248759	chr8:93248759:T:C	rs278536	T	C	T	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	93803675	93803676	chr8:93803676:A:G	rs777291564	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	93892096	93892097	chr8:93892097:T:C	rs11995678	T	C	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	93980593	93980594	chr8:93980594:A:C	rs4631428	A	C	a	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	94115667	94115668	chr8:94115668:T:G	rs2513788	T	G	T	Hoxc9_MA0485.1	8	1	-	7.714075693013403	2.8636735210687445	GCCCATAAAACAA
chr8	94169714	94169715	chr8:94169715:A:T	rs112802320	A	T	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	94234506	94234507	chr8:94234507:C:T	rs2613209	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	94234528	94234529	chr8:94234529:T:C	rs59141736	T	C	T	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	94242374	94242375	chr8:94242375:T:A	rs76525114	T	A	T	Hoxc9_MA0485.1	8	1	-	10.893404962803794	3.9914464526688382	TGCCATAAATCTG
chr8	94244469	94244470	chr8:94244470:G:A	rs2515150	G	A	A	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	94259129	94259130	chr8:94259130:T:C	rs947995514	T	C	T	Hoxc9_MA0485.1	4	1	-	9.698164817932325	8.53040110394074	GGCTATAAATAAT
chr8	94579676	94579677	chr8:94579677:G:A	rs1834525	G	A	A	Hoxc9_MA0485.1	1	1	+	8.563273889955592	7.0038303160455335	GGAAATAAATCCT
chr8	94633688	94633689	chr8:94633689:C:T	rs3133630	C	T	C	Hoxc9_MA0485.1	1	1	-	7.132336839746911	5.572893265836849	CGCCATTAATCTG
chr8	94679595	94679596	chr8:94679596:A:G	rs6471457	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	94951569	94951570	chr8:94951570:C:G	rs527234	C	G	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	95077479	95077480	chr8:95077480:G:A	chr8:95077480:G:A	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	95100667	95100668	chr8:95100668:G:A	rs112238232	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	95226367	95226368	chr8:95226368:C:G	rs1441395	C	G	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	95226385	95226386	chr8:95226386:T:G	rs75527404	T	G	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	95299825	95299826	chr8:95299826:A:G	rs13260109	A	G	A	Hoxc9_MA0485.1	8	1	+	8.010612704545085	1.1086541944101251	AGATATCAATCAC
chr8	95430344	95430345	chr8:95430345:A:G	rs4060044	A	G	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	95493746	95493747	chr8:95493747:G:A	rs7842490	G	A	g	Hoxc9_MA0485.1	3	1	-	7.1386040776018165	6.250351304579192	AGCCGTAAAACTC
chr8	95603072	95603073	chr8:95603073:A:G	rs34789154	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr8	95649936	95649937	chr8:95649937:G:T	rs16917940	G	T	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	95652141	95652142	chr8:95652142:A:G	chr8:95652142:A:G	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	95680518	95680519	chr8:95680519:A:G	rs4307308	A	G	A	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	95680524	95680525	chr8:95680525:T:C	rs4316123	T	C	T	Hoxc9_MA0485.1	5	1	+	8.24652121307199	3.761209850433506	AGCTATAAATTCC
chr8	95703768	95703769	chr8:95703769:A:C	rs150834459	A	C	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	96327933	96327934	chr8:96327934:T:C	rs188633938	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	96365258	96365259	chr8:96365259:G:T	rs62516265	G	T	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	96372911	96372912	chr8:96372912:T:A	rs35096529	T	A	T	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	96407902	96407903	chr8:96407903:T:G	rs62516355	T	G	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	96546206	96546207	chr8:96546207:T:A	rs6999386	T	A	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr8	96590545	96590546	chr8:96590546:C:T	rs771795396	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	96718587	96718588	chr8:96718588:G:C	rs4735432	G	C	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	96909916	96909917	chr8:96909917:C:T	rs114398920	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	96928492	96928493	chr8:96928493:G:C	rs182750731	G	C	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	97130863	97130864	chr8:97130864:G:C	rs10504969	G	C	G	Hoxc9_MA0485.1	10	1	-	9.76735682623046	4.966286018483182	TACTATAAATCAT
chr8	97142212	97142213	chr8:97142213:A:G	rs17737465	A	G	A	Hoxc9_MA0485.1	0	1	+	8.100820625320972	8.633635758611977	ACCAATCAATCAA
chr8	97216395	97216396	chr8:97216396:G:A	rs75341736	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	97266635	97266636	chr8:97266636:C:G	rs6982853	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	97396129	97396130	chr8:97396130:C:T	rs4734364	C	T	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	97776763	97776764	chr8:97776764:G:T	rs186924336	G	T	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	97784243	97784244	chr8:97784244:T:C	rs2438209	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	97836480	97836481	chr8:97836481:A:G	rs17827449	A	G	a	Hoxc9_MA0485.1	4	1	+	10.876842838536348	9.709079124544765	GGCCATAAATTAA
chr8	97957473	97957474	chr8:97957474:G:A	rs10955137	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	97992092	97992093	chr8:97992093:A:T	rs74964965	A	T	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	98186701	98186702	chr8:98186702:A:G	rs896417	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	98280698	98280699	chr8:98280699:T:G	rs1901367	T	G	T	Hoxc9_MA0485.1	7	1	-	9.092192537770275	2.1879634685646967	TGTTATAAATCTT
chr8	98331284	98331285	chr8:98331285:A:T	rs191777140	A	T	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	98343152	98343153	chr8:98343153:C:T	rs11774385	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	98424795	98424796	chr8:98424796:A:G	rs4236852	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	98598203	98598204	chr8:98598204:A:G	chr8:98598204:A:G	A	G	A	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	98631996	98631997	chr8:98631997:C:T	rs77443352	C	T	C	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	98925904	98925905	chr8:98925905:A:G	rs16897128	A	G	A	Hoxc9_MA0485.1	8	1	+	9.1783430156729	2.276384505537939	CCACATAAATCAC
chr8	98983597	98983598	chr8:98983598:A:G	rs79010964	A	G	A	Hoxc9_MA0485.1	9	1	-	7.776793047077738	0.8885672327041045	ACCAGTCAATCAC
chr8	99323863	99323864	chr8:99323864:A:G	rs3134309	A	G	g	Hoxc9_MA0485.1	1	1	-	9.65153859878069	10.595338438025554	TTCAATAAATCAC
chr8	99837781	99837782	chr8:99837782:A:G	rs7844422	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	100216254	100216255	chr8:100216255:C:G	rs2514683	C	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	100424871	100424872	chr8:100424872:C:T	rs7357495	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	100602102	100602103	chr8:100602103:C:T	rs2154641	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	100640468	100640469	chr8:100640469:T:G	rs28782547	T	G	T	Hoxc9_MA0485.1	5	1	+	7.216097308062999	0.3175543323434022	GAGCATAAATCCC
chr8	100644444	100644445	chr8:100644445:A:T	rs13256165	A	T	A	Hoxc9_MA0485.1	8	1	+	9.984794601123792	3.082836090988833	GGGCATAAATCAA
chr8	100664112	100664113	chr8:100664113:C:T	rs72681431	C	T	T	Hoxc9_MA0485.1	1	1	+	8.066756676699326	7.122956837454461	CCACATAAATCTT
chr8	100956704	100956705	chr8:100956705:G:A	rs34145796	G	A	G	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	100956710	100956711	chr8:100956711:A:C	rs72667375	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	101044493	101044494	chr8:101044494:T:C	rs62515508	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	101394917	101394918	chr8:101394918:A:G	rs77701710	A	G	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr8	101395721	101395722	chr8:101395722:G:T	rs56136206	G	T	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr8	101406981	101406982	chr8:101406982:A:G	rs10098920	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	101470017	101470018	chr8:101470018:C:T	chr8:101470018:C:T	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	101643782	101643783	chr8:101643783:G:A	rs2211915	G	A	A	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	101665098	101665099	chr8:101665099:G:T	rs4734572	G	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	101690378	101690379	chr8:101690379:A:C	rs4734582	A	C	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr8	101717174	101717175	chr8:101717175:T:C	rs7816488	T	C	T	Hoxc9_MA0485.1	9	1	+	8.414667402313695	1.5264415879400643	TCCCATAAATTTT
chr8	101755838	101755839	chr8:101755839:T:G	rs2154652	T	G	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	101761155	101761156	chr8:101761156:C:T	rs28396908	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	101849729	101849730	chr8:101849730:C:G	rs73696518	C	G	C	Hoxc9_MA0485.1	10	1	+	8.810644642227256	4.00957383447998	TTCCATAAATCTG
chr8	101953919	101953920	chr8:101953920:C:T	rs4145554	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr8	102129698	102129699	chr8:102129699:A:G	rs780109888	A	G	A	Hoxc9_MA0485.1	12	1	-	9.306967442246117	9.56096439601067	AGGAATAAATCAT
chr8	102227774	102227775	chr8:102227775:A:C	rs2607659	A	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	102392920	102392921	chr8:102392921:T:C	rs13267556	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	102523138	102523139	chr8:102523139:G:T	rs2033560	G	T	G	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	102820027	102820028	chr8:102820028:G:A	rs12546520	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	102941761	102941762	chr8:102941762:G:A	rs651816	G	A	a	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	103120227	103120228	chr8:103120228:A:C	rs62527574	A	C	A	Hoxc9_MA0485.1	7	1	+	8.835776334721379	1.9315472655158012	GCCTATAAATTTC
chr8	103122961	103122962	chr8:103122962:A:G	rs73701734	A	G	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	103154181	103154182	chr8:103154182:C:T	rs72671371	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	103347400	103347401	chr8:103347401:G:A	rs1464550	G	A	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	103512335	103512336	chr8:103512336:G:A	rs78035466	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	103795962	103795963	chr8:103795963:C:T	rs79263410	C	T	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	103874206	103874207	chr8:103874207:A:G	rs4446700	A	G	G	Hoxc9_MA0485.1	8	1	+	8.996079442864545	2.094120932729588	AACAATAAATCTA
chr8	104163768	104163769	chr8:104163769:C:G	rs2441874	C	G	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	104363636	104363637	chr8:104363637:G:A	rs2334119	G	A	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	104655146	104655147	chr8:104655147:A:G	rs76731768	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	105020266	105020267	chr8:105020267:G:T	rs1402819	G	T	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	105090660	105090661	chr8:105090661:G:T	rs285822	G	T	T	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	105222413	105222414	chr8:105222414:G:A	rs6468988	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	105222436	105222437	chr8:105222437:A:T	rs151215976	A	T	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	105300840	105300841	chr8:105300841:T:C	rs2957465	T	C	T	Hoxc9_MA0485.1	4	1	-	7.261509837071716	6.093746123080133	AGGCATGAATCAC
chr8	105571169	105571170	chr8:105571170:G:C	rs4734880	G	C	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr8	105638781	105638782	chr8:105638782:G:A	rs17291297	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	106000686	106000687	chr8:106000687:C:T	rs12546875	C	T	T	Hoxc9_MA0485.1	15	0	+	0	0	.
chr8	106046055	106046056	chr8:106046056:A:G	rs59493472	A	G	A	Hoxc9_MA0485.1	8	1	+	8.582188639422165	1.6802301292872057	CATCATAAATCAG
chr8	106277563	106277564	chr8:106277564:C:T	rs114022941	C	T	C	Hoxc9_MA0485.1	6	1	-	8.32637854786725	11.360584314376672	AGTCATGAATCAT
chr8	106277571	106277572	chr8:106277572:T:C	rs1566786	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	106778825	106778826	chr8:106778826:A:C	chr8:106778826:A:C	A	C	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr8	106799278	106799279	chr8:106799279:T:G	rs186192793	T	G	t	Hoxc9_MA0485.1	2	1	+	8.755274375425381	7.4364087108652965	TTTCATAAATCAT
chr8	107068390	107068391	chr8:107068391:A:G	rs7822406	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	107096660	107096661	chr8:107096661:A:T	rs78959081	A	T	A	Hoxc9_MA0485.1	11	1	+	8.820826351522141	7.9632369663131195	GGCTGTAAATTAA
chr8	107169993	107169994	chr8:107169994:C:T	rs10505096	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	107279076	107279077	chr8:107279077:G:A	rs951622482	G	A	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	107633964	107633965	chr8:107633965:T:C	rs366575	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	107883607	107883608	chr8:107883608:G:T	rs1389972	G	T	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	108070911	108070912	chr8:108070912:T:C	rs13263135	T	C	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	108347275	108347276	chr8:108347276:C:T	rs35068139	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	109621045	109621046	chr8:109621046:A:T	rs2844250	A	T	A	Hoxc9_MA0485.1	8	1	+	10.386289806351158	3.4843312962161974	TTCCATAAATCAC
chr8	111006094	111006095	chr8:111006095:C:G	rs7459880	C	G	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	111758239	111758240	chr8:111758240:G:A	rs35052391	G	A	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	111832461	111832462	chr8:111832462:C:A	rs182067910	C	A	c	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	112522414	112522415	chr8:112522415:C:G	rs17885888	C	G	C	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	112806993	112806994	chr8:112806994:T:G	rs12334432	T	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	113006153	113006154	chr8:113006154:T:C	rs7004426	T	C	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	113133445	113133446	chr8:113133446:T:C	rs7818176	T	C	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	114020874	114020875	chr8:114020875:C:T	rs114579395	C	T	C	Hoxc9_MA0485.1	3	1	+	7.597446250243477	6.709193477220854	AGACGTAAATCCT
chr8	114326230	114326231	chr8:114326231:T:A	rs10107273	T	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	114842297	114842298	chr8:114842298:T:G	rs4633092	T	G	G	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr8	114934985	114934986	chr8:114934986:A:G	rs78152092	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	115194387	115194388	chr8:115194388:C:A	rs777809	C	A	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	115506355	115506356	chr8:115506356:G:A	rs3808425	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	115660519	115660520	chr8:115660520:G:T	rs179444	G	T	T	Hoxc9_MA0485.1	10	1	-	9.278591122091859	6.59459078821791	TATCATAAATCAT
chr8	115696375	115696376	chr8:115696376:G:T	rs17729371	G	T	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	116493031	116493032	chr8:116493032:A:G	rs13252528	A	G	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	116522564	116522565	chr8:116522565:T:C	rs2068717	T	C	T	Hoxc9_MA0485.1	8	1	-	10.21205447109347	3.31009596095851	GCACATAAATCAT
chr8	116788585	116788586	chr8:116788586:A:G	rs908452391	A	G	A	Hoxc9_MA0485.1	19	0	+	0	0	.
chr8	116806985	116806986	chr8:116806986:G:C	rs17664177	G	C	G	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	116817791	116817792	chr8:116817792:T:G	rs138148198	T	G	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	117039064	117039065	chr8:117039065:T:A	rs905904	T	A	A	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	117063396	117063397	chr8:117063397:T:C	rs116113707	T	C	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	117240204	117240205	chr8:117240205:G:T	rs1793732	G	T	T	Hoxc9_MA0485.1	3	1	-	10.979632687440642	10.244881479870175	GGTCGTAAATCAC
chr8	117252979	117252980	chr8:117252980:C:T	rs2705248	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr8	117316333	117316334	chr8:117316334:G:A	rs1793694	G	A	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	117592947	117592948	chr8:117592948:T:C	rs62521239	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	117667170	117667171	chr8:117667171:T:G	rs10108248	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	117862709	117862710	chr8:117862710:G:A	rs17452847	G	A	G	Hoxc9_MA0485.1	0	1	+	7.89685378916779	7.364038655876787	GGCTACAAATCAT
chr8	117895952	117895953	chr8:117895953:C:T	rs7842361	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	118116183	118116184	chr8:118116184:T:A	rs148506839	T	A	T	Hoxc9_MA0485.1	9	1	+	8.787349616382285	4.959707047882261	CCCAATAAATCTG
chr8	118122444	118122445	chr8:118122445:T:A	rs12679263	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	118209606	118209607	chr8:118209607:T:G	rs1159092263	T	G	T	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr8	118386340	118386341	chr8:118386341:C:G	chr8:118386341:C:G	C	G	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	118646245	118646246	chr8:118646246:G:T	rs181977971	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	118676328	118676329	chr8:118676329:A:G	rs59139982	A	G	A	Hoxc9_MA0485.1	0	1	+	8.323914798433258	8.85672993172426	ACCCATTAATCAC
chr8	118802907	118802908	chr8:118802908:A:G	rs11781292	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr8	118802919	118802920	chr8:118802920:T:C	rs3103976	T	C	T	Hoxc9_MA0485.1	11	1	-	10.295650200759388	5.88311680189102	TGACATAAATCAT
chr8	118822827	118822828	chr8:118822828:G:T	rs540193673	G	T	G	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	118900872	118900873	chr8:118900873:G:T	rs4477060	G	T	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	118987291	118987292	chr8:118987292:A:G	rs1825512	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr8	119205327	119205328	chr8:119205328:T:C	rs74513007	T	C	T	Hoxc9_MA0485.1	12	1	-	7.398992840949285	7.5246731977827555	TGCCATCAATCCA
chr8	119205340	119205341	chr8:119205341:G:T	rs75888063	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	119362232	119362233	chr8:119362233:G:A	rs2447160	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	119362293	119362294	chr8:119362294:C:T	rs140243815	C	T	C	Hoxc9_MA0485.1	12	1	+	10.4418368725734	10.187839918808848	TCCTATAAATCAC
chr8	119495789	119495790	chr8:119495790:T:A	rs6469828	T	A	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	119579223	119579224	chr8:119579224:C:T	rs10505367	C	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	119588724	119588725	chr8:119588725:G:A	rs16892827	G	A	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr8	119599245	119599246	chr8:119599246:G:A	rs77456161	G	A	G	Hoxc9_MA0485.1	3	1	-	7.945966025824625	7.057713252802002	AGTCTTAAATCAC
chr8	120242898	120242899	chr8:120242899:C:T	rs115059100	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	120266541	120266542	chr8:120266542:A:G	rs76200748	A	G	A	Hoxc9_MA0485.1	6	1	+	7.956698748862752	4.9224929823533286	TGCCTTAAATCAA
chr8	120266710	120266711	chr8:120266711:A:G	rs16893791	A	G	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	120314942	120314943	chr8:120314943:C:T	rs16893905	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	120507815	120507816	chr8:120507816:T:G	rs6469932	T	G	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	120559025	120559026	chr8:120559026:A:G	rs4297067	A	G	A	Hoxc9_MA0485.1	6	1	-	8.085856802603706	9.441249972810242	AGTCATTAATCAC
chr8	120628890	120628891	chr8:120628891:G:A	rs10097935	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	120685563	120685564	chr8:120685564:C:T	rs7009272	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr8	120730041	120730042	chr8:120730042:G:C	rs4871106	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	120742451	120742452	chr8:120742452:T:C	rs73323122	T	C	C	Hoxc9_MA0485.1	11	1	-	10.337445565328224	5.924912166459854	AGAAATAAATCAC
chr8	120750413	120750414	chr8:120750414:T:C	rs11996216	T	C	C	Hoxc9_MA0485.1	4	1	-	9.19848508399655	8.030721370004967	ACAAATAAATCAC
chr8	120762182	120762183	chr8:120762183:A:G	rs10955987	A	G	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	120961727	120961728	chr8:120961728:C:T	rs16894464	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr8	120968451	120968452	chr8:120968452:G:T	rs73707472	G	T	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	121262332	121262333	chr8:121262333:G:A	rs16892946	G	A	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr8	121318324	121318325	chr8:121318325:A:C	rs12547273	A	C	A	Hoxc9_MA0485.1	3	1	+	8.588233295415382	9.322984502985852	AGCATTAAATCAC
chr8	121600586	121600587	chr8:121600587:C:T	rs12676323	C	T	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	121721961	121721962	chr8:121721962:G:A	rs6999197	G	A	A	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	121773435	121773436	chr8:121773436:G:A	rs279619	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	122167544	122167545	chr8:122167545:T:C	rs12544067	T	C	T	Hoxc9_MA0485.1	5	1	+	8.365053386013535	3.8797420233750493	AGCAATGAATCTC
chr8	122498840	122498841	chr8:122498841:G:C	rs58791809	G	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	122592740	122592741	chr8:122592741:A:G	rs77732209	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	122841753	122841754	chr8:122841754:C:T	rs145301829	C	T	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	122995583	122995584	chr8:122995584:A:C	rs75074657	A	C	A	Hoxc9_MA0485.1	7	1	+	9.611382131332691	2.7071530621271136	GCCTGTAAATCAG
chr8	123072365	123072366	chr8:123072366:G:C	rs4871343	G	C	C	Hoxc9_MA0485.1	10	1	-	8.104431717313933	3.303360909566655	GGCAATAAAACTC
chr8	123157390	123157391	chr8:123157391:A:G	rs528333922	A	G	A	Hoxc9_MA0485.1	8	1	+	8.360043785014408	1.458085274879449	TGCTGTAAATCCC
chr8	123161390	123161391	chr8:123161391:G:C	rs115697009	G	C	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr8	123161424	123161425	chr8:123161425:C:A	rs958677931	C	A	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	123171310	123171311	chr8:123171311:A:G	rs7822076	A	G	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	123476933	123476934	chr8:123476934:G:A	rs112153611	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr8	123523051	123523052	chr8:123523052:A:C	rs16898508	A	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	123539734	123539735	chr8:123539735:A:G	rs62521286	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	123592299	123592300	chr8:123592300:C:T	rs58536265	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	123685458	123685459	chr8:123685459:C:T	rs75613507	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	123832938	123832939	chr8:123832939:A:C	rs2116356	A	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	124272238	124272239	chr8:124272239:C:T	rs116901885	C	T	c	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	124283546	124283547	chr8:124283547:C:T	rs10089507	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr8	124295482	124295483	chr8:124295483:A:G	rs1365168835	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	124352125	124352126	chr8:124352126:C:T	rs4355753	C	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	124472355	124472356	chr8:124472356:A:C	rs74322982	A	C	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	124559265	124559266	chr8:124559266:T:C	rs3793399	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	124592918	124592919	chr8:124592919:G:T	rs149064342	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	124592934	124592935	chr8:124592935:G:A	rs75506540	G	A	G	Hoxc9_MA0485.1	1	1	+	8.304352308384496	6.744908734474435	GGCAACAAATCAC
chr8	124757934	124757935	chr8:124757935:G:A	rs7013867	G	A	A	Hoxc9_MA0485.1	1	1	-	9.156755122249464	8.2129552830046	ACGCATAAATCAC
chr8	124781724	124781725	chr8:124781725:G:A	rs78597322	G	A	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	124842829	124842830	chr8:124842830:G:C	rs191942950	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	124941196	124941197	chr8:124941197:T:C	rs7004579	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	124941231	124941232	chr8:124941232:G:A	rs6984664	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	125091030	125091031	chr8:125091031:C:A	rs142254336	C	A	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	125314214	125314215	chr8:125314215:A:G	rs142891049	A	G	A	Hoxc9_MA0485.1	6	1	+	10.612033866681143	7.5778281001717245	TCCCATAAATCAG
chr8	125455283	125455284	chr8:125455284:T:C	rs77936901	T	C	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	125518055	125518056	chr8:125518056:T:G	rs1075553	T	G	T	Hoxc9_MA0485.1	6	1	-	8.717855277493793	6.544523982162813	AGTCATAAATCCA
chr8	125658931	125658932	chr8:125658932:T:C	rs897157	T	C	T	Hoxc9_MA0485.1	11	1	-	8.867051474941832	4.454518076073464	GGCATTAAATCAT
chr8	125831403	125831404	chr8:125831404:T:A	rs61003425	T	A	A	Hoxc9_MA0485.1	3	1	+	10.385615285265578	10.539116850717733	GCCTATAAATCTT
chr8	126046475	126046476	chr8:126046476:G:T	rs12543713	G	T	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	126046506	126046507	chr8:126046507:A:G	rs6984936	A	G	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	126295911	126295912	chr8:126295912:C:A	rs7834246	C	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr8	126436332	126436333	chr8:126436333:G:A	rs10216863	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr8	126466284	126466285	chr8:126466285:C:T	rs7821388	C	T	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr8	126571759	126571760	chr8:126571760:A:G	rs7832762	A	G	G	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr8	126668668	126668669	chr8:126668669:A:C	rs7831850	A	C	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	126787163	126787164	chr8:126787164:G:T	rs34866192	G	T	G	Hoxc9_MA0485.1	22	0	-	0	0	.
chr8	127342538	127342539	chr8:127342539:C:A	rs10095860	C	A	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	127505514	127505515	chr8:127505515:A:C	rs4242383	A	C	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	127586313	127586314	chr8:127586314:T:C	rs74534346	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	127763912	127763913	chr8:127763913:T:A	rs150718493	T	A	T	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	127875903	127875904	chr8:127875904:A:G	rs16902450	A	G	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr8	127970594	127970595	chr8:127970595:A:G	rs6981693	A	G	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	128057738	128057739	chr8:128057739:G:A	rs72720893	G	A	G	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr8	128064204	128064205	chr8:128064205:C:T	rs13254990	C	T	C	Hoxc9_MA0485.1	1	1	+	9.274073158581816	8.330273319336952	TCCTGTAAATCAC
chr8	128106414	128106415	chr8:128106415:A:C	rs115611912	A	C	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr8	128317182	128317183	chr8:128317183:C:T	rs116614422	C	T	c	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr8	128323120	128323121	chr8:128323121:G:A	rs76280666	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr8	128380727	128380728	chr8:128380728:A:G	rs75111984	A	G	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	128543285	128543286	chr8:128543286:T:C	rs2011527	T	C	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	128576961	128576962	chr8:128576962:T:G	chr8:128576962:T:G	T	G	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	128598889	128598890	chr8:128598890:T:A	rs11780050	T	A	T	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr8	128605407	128605408	chr8:128605408:A:G	rs6993958	A	G	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	128665561	128665562	chr8:128665562:T:G	rs4733522	T	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	128815661	128815662	chr8:128815662:A:G	rs117556959	A	G	A	Hoxc9_MA0485.1	8	1	+	8.689407051643636	1.7874485415086774	AGGTATAAATCAG
chr8	128863013	128863014	chr8:128863014:A:G	rs2056314	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	128863023	128863024	chr8:128863024:A:G	rs2056313	A	G	A	Hoxc9_MA0485.1	4	1	+	7.1037684953659594	5.936004781374375	TCCCATCAATCCC
chr8	128890148	128890149	chr8:128890149:C:T	rs10956450	C	T	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	128993911	128993912	chr8:128993912:T:C	rs1441991	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	129148587	129148588	chr8:129148588:T:G	rs10112477	T	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	129196744	129196745	chr8:129196745:T:C	rs13269074	T	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr8	129238196	129238197	chr8:129238197:T:C	rs7820834	T	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr8	129508661	129508662	chr8:129508662:A:G	rs749790326	A	G	A	Hoxc9_MA0485.1	1	1	+	8.213364958351743	9.772808532261804	CACTATAAATCTG
chr8	129696329	129696330	chr8:129696330:C:A	rs28496233	C	A	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr8	129713798	129713799	chr8:129713799:G:A	rs1481753	G	A	G	Hoxc9_MA0485.1	27	0	-	0	0	.
chr8	129849153	129849154	chr8:129849154:C:A	rs80182141	C	A	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	129882546	129882547	chr8:129882547:A:G	rs76857096	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr8	129886935	129886936	chr8:129886936:T:C	rs73710957	T	C	T	Hoxc9_MA0485.1	3	1	+	8.790986564779843	9.679239337802468	ACATATAAATCAT
chr8	130134597	130134598	chr8:130134598:C:T	rs34014736	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	130407741	130407742	chr8:130407742:G:A	rs59012190	G	A	g	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr8	130481419	130481420	chr8:130481420:G:A	rs116764453	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr8	130481422	130481423	chr8:130481423:G:A	rs76887552	G	A	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	130481426	130481427	chr8:130481427:T:G	rs7386165	T	G	G	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr8	130527410	130527411	chr8:130527411:A:C	rs59814011	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	130584368	130584369	chr8:130584369:A:G	rs10086936	A	G	A	Hoxc9_MA0485.1	0	1	+	9.797253085752335	10.330068219043337	ATCCATAAATCTT
chr8	130584400	130584401	chr8:130584401:C:A	rs10087155	C	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	130695055	130695056	chr8:130695056:A:G	rs550534209	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	131350823	131350824	chr8:131350824:C:T	rs55861291	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	131618473	131618474	chr8:131618474:G:A	rs172124	G	A	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	131717991	131717992	chr8:131717992:G:T	rs10087741	G	T	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	131727530	131727531	chr8:131727531:T:G	rs12541606	T	G	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr8	131967038	131967039	chr8:131967039:G:A	rs4301436	G	A	A	Hoxc9_MA0485.1	4	1	+	9.218720247372987	10.38648396136457	GACAGTAAATCAA
chr8	131975040	131975041	chr8:131975041:T:A	rs2133998	T	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	132017597	132017598	chr8:132017598:T:C	rs12542997	T	C	T	Hoxc9_MA0485.1	11	1	+	7.340108364285512	6.144707894595454	AGCAGTCAATCTG
chr8	132046786	132046787	chr8:132046787:A:T	rs10216899	A	T	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	132065835	132065836	chr8:132065836:G:A	rs78238400	G	A	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr8	132091650	132091651	chr8:132091651:A:G	rs13258119	A	G	a	Hoxc9_MA0485.1	5	1	-	8.32637854786725	3.841067185228765	AGTCATGAATCAT
chr8	132107591	132107592	chr8:132107592:G:A	rs59816126	G	A	g	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	132468081	132468082	chr8:132468082:C:T	rs6997998	C	T	T	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	132471076	132471077	chr8:132471077:T:C	rs72723116	T	C	T	Hoxc9_MA0485.1	8	1	-	8.410034937843815	1.5080764277088534	GCATGTAAATCAC
chr8	132516237	132516238	chr8:132516238:C:T	rs78112339	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	132675867	132675868	chr8:132675868:T:C	chr8:132675868:T:C	T	C	T	Hoxc9_MA0485.1	25	0	-	0	0	.
chr8	132947591	132947592	chr8:132947592:A:G	rs77047672	A	G	A	Hoxc9_MA0485.1	16	0	+	0	0	.
chr8	133015731	133015732	chr8:133015732:A:G	rs6471109	A	G	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr8	133353800	133353801	chr8:133353801:T:C	rs73708751	T	C	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr8	133362929	133362930	chr8:133362930:C:T	rs116835984	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	133527042	133527043	chr8:133527043:C:T	rs3779925	C	T	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	133527051	133527052	chr8:133527052:T:C	rs79786372	T	C	T	Hoxc9_MA0485.1	8	1	-	6.964412562030993	0.06245405189603204	GGCCTTCAATCAG
chr8	133527054	133527055	chr8:133527055:A:C	rs3779926	A	C	C	Hoxc9_MA0485.1	5	1	-	6.964412562030993	0.06586958631139594	GGCCTTCAATCAG
chr8	133574469	133574470	chr8:133574470:A:G	rs939024	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	133795046	133795047	chr8:133795047:G:A	rs76818325	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	133929631	133929632	chr8:133929632:G:A	rs117429198	G	A	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	133952189	133952190	chr8:133952190:T:A	rs55644802	T	A	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	134199134	134199135	chr8:134199135:G:A	rs11996214	G	A	A	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	134199138	134199139	chr8:134199139:G:A	rs11996215	G	A	A	Hoxc9_MA0485.1	10	1	-	10.54964715452394	8.745811250215189	TGACATAAATCAC
chr8	134214219	134214220	chr8:134214220:G:A	rs28616188	G	A	A	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr8	134233086	134233087	chr8:134233087:G:C	rs73711417	G	C	G	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	134233118	134233119	chr8:134233119:G:A	rs138502935	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	134429913	134429914	chr8:134429914:T:G	rs12156198	T	G	T	Hoxc9_MA0485.1	12	1	+	8.735280946408981	8.271222121258655	GCCAATAAATTTT
chr8	134444807	134444808	chr8:134444808:C:G	rs13269015	C	G	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr8	134457060	134457061	chr8:134457061:T:C	rs117090398	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	134479131	134479132	chr8:134479132:T:C	rs11773931	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr8	134507720	134507721	chr8:134507721:C:T	rs16905157	C	T	C	Hoxc9_MA0485.1	0	1	+	9.16519798749677	9.397541645016137	CTCAATAAATCAT
chr8	134554802	134554803	chr8:134554803:G:C	rs1372662	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr8	134597293	134597294	chr8:134597294:G:A	rs879104	G	A	A	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr8	134724545	134724546	chr8:134724546:G:A	rs6577752	G	A	g	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr8	134735050	134735051	chr8:134735051:T:A	rs117824771	T	A	t	Hoxc9_MA0485.1	8	1	-	8.73197934958041	1.8300208394454498	CCTAATAAATCAT
chr8	134834293	134834294	chr8:134834294:T:G	rs189216530	T	G	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	134834297	134834298	chr8:134834298:C:A	rs80147395	C	A	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	135042003	135042004	chr8:135042004:T:C	rs9324520	T	C	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr8	135143904	135143905	chr8:135143905:A:C	rs72726699	A	C	A	Hoxc9_MA0485.1	14	0	+	0	0	.
chr8	135632478	135632479	chr8:135632479:C:T	rs7014547	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	135646951	135646952	chr8:135646952:C:T	rs28621864	C	T	C	Hoxc9_MA0485.1	6	1	-	7.381854505519195	10.416060272028615	TGCCATGAATCCC
chr8	135689883	135689884	chr8:135689884:G:A	rs10098297	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	135727035	135727036	chr8:135727036:G:T	rs7018269	G	T	T	Hoxc9_MA0485.1	0	1	-	9.926310097713957	10.681203373608076	CGCAATAAATCTG
chr8	135734737	135734738	chr8:135734738:T:G	rs10105839	T	G	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	135845961	135845962	chr8:135845962:G:A	rs13270825	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr8	135866788	135866789	chr8:135866789:A:G	rs150341922	A	G	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	136723369	136723370	chr8:136723370:G:A	rs17647473	G	A	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr8	137010028	137010029	chr8:137010029:A:G	rs7357354	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	137202651	137202652	chr8:137202652:C:G	rs73712227	C	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	137492734	137492735	chr8:137492735:T:A	rs16907338	T	A	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr8	137492774	137492775	chr8:137492775:G:A	rs72725975	G	A	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr8	139000221	139000222	chr8:139000222:C:T	rs140429085	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr8	139264242	139264243	chr8:139264243:C:T	rs4400357	C	T	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	139268336	139268337	chr8:139268337:T:G	rs62520253	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	139321794	139321795	chr8:139321795:C:T	rs72614012	C	T	C	Hoxc9_MA0485.1	16	0	-	0	0	.
chr8	139339255	139339256	chr8:139339256:A:G	rs16910485	A	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	139386751	139386752	chr8:139386752:T:G	rs12550306	T	G	G	Hoxc9_MA0485.1	5	1	+	9.009465484203348	2.1109225084837524	GATAATAAATCAA
chr8	139602175	139602176	chr8:139602176:C:T	rs7012654	C	T	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	139774221	139774222	chr8:139774222:T:C	rs744885	T	C	T	Hoxc9_MA0485.1	4	1	-	8.01211343407848	6.844349720086898	ATCCATAAATCCA
chr8	139931892	139931893	chr8:139931893:C:T	rs2233232	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	140051699	140051700	chr8:140051700:A:G	rs4374967	A	G	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr8	140142869	140142870	chr8:140142870:C:G	rs4379425	C	G	G	Hoxc9_MA0485.1	12	1	+	9.56096439601067	8.842908617095791	AGGAATAAATCAC
chr8	140143987	140143988	chr8:140143988:A:G	rs79810242	A	G	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr8	140274400	140274401	chr8:140274401:T:C	rs4637801	T	C	C	Hoxc9_MA0485.1	5	1	+	10.466051424858023	5.980740062219534	GCACATAAATCAC
chr8	140340127	140340128	chr8:140340128:A:G	rs6985513	A	G	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	140591726	140591727	chr8:140591727:G:A	rs183932344	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr8	140917559	140917560	chr8:140917560:T:C	rs6987946	T	C	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr8	141007109	141007110	chr8:141007110:A:G	rs73713304	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr8	141068135	141068136	chr8:141068136:C:T	rs1029011722	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr8	141423094	141423095	chr8:141423095:G:A	rs192442023	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	141431488	141431489	chr8:141431489:G:A	rs148325578	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr8	141580077	141580078	chr8:141580078:T:A	rs77754829	T	A	T	Hoxc9_MA0485.1	24	0	-	0	0	.
chr8	141580105	141580106	chr8:141580106:T:G	rs887129379	T	G	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr8	141600506	141600507	chr8:141600507:C:T	rs73715745	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	141670632	141670633	chr8:141670633:T:C	rs6578210	T	C	T	Hoxc9_MA0485.1	4	1	-	6.622456368458491	5.454692654466908	GGCCATAATTCAC
chr8	141679519	141679520	chr8:141679520:T:G	rs74896568	T	G	T	Hoxc9_MA0485.1	2	1	+	8.42263093191047	7.103765267350384	ACTCATAAATCCC
chr8	141735010	141735011	chr8:141735011:G:A	rs12545322	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr8	141761288	141761289	chr8:141761289:A:G	rs9720892	A	G	G	Hoxc9_MA0485.1	4	1	+	8.168010188930019	7.000246474938435	TCCAATCAATCAT
chr8	141906192	141906193	chr8:141906193:T:C	rs75210113	T	C	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr8	142201317	142201318	chr8:142201318:G:A	rs75092267	G	A	-	Hoxc9_MA0485.1	28	0	-	0	0	.
chr8	142208986	142208987	chr8:142208987:T:A	rs11990589	T	A	T	Hoxc9_MA0485.1	9	1	+	9.479856180119201	5.6522136116191755	AGAAATAAATCTC
chr8	142245459	142245460	chr8:142245460:A:G	rs4976983	A	G	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr8	142288006	142288007	chr8:142288007:C:T	rs4976992	C	T	N	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	142288018	142288019	chr8:142288019:C:A	rs4976993	C	A	N	Hoxc9_MA0485.1	3	1	+	8.10366280451589	7.368911596945422	ACCCATCAATCTG
chr8	142640622	142640623	chr8:142640623:T:A	rs1455283421	T	A	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr8	142640658	142640659	chr8:142640659:T:G	rs7017851	T	G	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr8	142661000	142661001	chr8:142661001:T:C	rs4736366	T	C	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr8	142661022	142661023	chr8:142661023:T:C	rs12675227	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr8	142742439	142742440	chr8:142742440:C:G	rs2572914	C	G	C	Hoxc9_MA0485.1	2	1	-	7.633291155185885	10.329175296907191	GGGTATAAATCCT
chr8	142742444	142742445	chr8:142742445:G:C	rs13254346	G	C	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr8	142742457	142742458	chr8:142742458:G:A	rs13254358	G	A	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr8	143048418	143048419	chr8:143048419:G:A	chr8:143048419:G:A	G	A	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr8	143056365	143056366	chr8:143056366:A:G	rs4977120	A	G	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	143174603	143174604	chr8:143174604:G:T	rs10448085	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr8	143179768	143179769	chr8:143179769:G:A	rs75955964	G	A	-	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr8	143240435	143240436	chr8:143240436:T:C	rs6558337	T	C	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr8	143420135	143420136	chr8:143420136:C:G	rs60215733	C	G	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr8	143420163	143420164	chr8:143420164:G:A	rs56222824	G	A	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	143430887	143430888	chr8:143430888:G:T	rs960810263	G	T	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr8	143516247	143516248	chr8:143516248:A:C	rs115061386	A	C	A	Hoxc9_MA0485.1	11	1	+	9.21831996086433	7.165330105965249	TCTAATAAATCAC
chr8	143608715	143608716	chr8:143608716:A:C	rs10097337	A	C	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr8	144292565	144292566	chr8:144292566:T:A	rs141070733	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr8	144463866	144463867	chr8:144463867:C:T	rs1046830	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr8	145063410	145063411	chr8:145063411:T:C	rs6599563	T	C	.	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	237987	237988	chr9:237988:C:T	rs7858717	C	T	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr9	445363	445364	chr9:445364:T:C	rs4741936	T	C	C	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	455839	455840	chr9:455840:T:A	rs10974555	T	A	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	506479	506480	chr9:506480:C:T	rs550718420	C	T	C	Hoxc9_MA0485.1	3	1	+	11.441654558016912	10.55340178499429	GTCCATAAATCAC
chr9	717892	717893	chr9:717893:C:G	rs16923077	C	G	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	736247	736248	chr9:736248:C:T	rs13283614	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	887018	887019	chr9:887019:A:G	rs10815945	A	G	A	Hoxc9_MA0485.1	27	0	-	0	0	.
chr9	1048401	1048402	chr9:1048402:G:A	rs2279985	G	A	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr9	1052676	1052677	chr9:1052677:T:C	rs7867675	T	C	T	Hoxc9_MA0485.1	2	1	+	7.203019472287284	8.580037949448506	GGTCATCAATCCG
chr9	1052685	1052686	chr9:1052686:C:A	rs7849591	C	A	C	Hoxc9_MA0485.1	11	1	+	7.203019472287284	9.256009327186364	GGTCATCAATCCG
chr9	1098900	1098901	chr9:1098901:A:C	rs75857685	A	C	a	Hoxc9_MA0485.1	5	1	-	7.123025468291784	0.22448249257218858	CTCCATCAATCTC
chr9	1102942	1102943	chr9:1102943:T:C	rs10756149	T	C	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	1121084	1121085	chr9:1121085:C:T	rs10959548	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	1124118	1124119	chr9:1124119:A:G	rs150118836	A	G	A	Hoxc9_MA0485.1	2	1	-	10.008272716203722	11.385291193364944	AGTTATAAATCAG
chr9	1201864	1201865	chr9:1201865:C:T	rs7025972	C	T	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	1270675	1270676	chr9:1270676:T:C	rs882092	T	C	T	Hoxc9_MA0485.1	6	1	-	8.522433900169645	5.488228133660221	TCATATAAATCAC
chr9	1383918	1383919	chr9:1383919:A:G	rs998573	A	G	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr9	1445783	1445784	chr9:1445784:G:C	rs614575	G	C	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	1598301	1598302	chr9:1598302:A:T	rs10810464	A	T	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	2153464	2153465	chr9:2153465:A:G	rs4740662	A	G	G	Hoxc9_MA0485.1	28	0	-	0	0	.
chr9	2180535	2180536	chr9:2180536:T:C	rs10757235	T	C	C	Hoxc9_MA0485.1	11	1	-	10.055137694231163	5.642604295362793	AATCATAAATCAC
chr9	2209975	2209976	chr9:2209976:A:T	rs10125847	A	T	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	2210009	2210010	chr9:2210010:T:C	rs10965210	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	2292893	2292894	chr9:2292894:G:A	rs145875771	G	A	G	Hoxc9_MA0485.1	1	1	-	10.341341484261001	9.397541645016137	TCCAATAAATCAT
chr9	2386047	2386048	chr9:2386048:G:T	rs117282965	G	T	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	2427181	2427182	chr9:2427182:T:C	rs10966253	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	2477567	2477568	chr9:2477568:A:T	rs11793609	A	T	A	Hoxc9_MA0485.1	3	1	-	9.131747353979488	9.285248919431643	AGCTGTAAATTAC
chr9	2493750	2493751	chr9:2493751:T:G	rs12216886	T	G	T	Hoxc9_MA0485.1	7	1	-	9.819673510289244	2.915444441083666	CACCATAAATCTC
chr9	2636160	2636161	chr9:2636161:C:T	rs7035616	C	T	T	Hoxc9_MA0485.1	30	0	+	0	0	.
chr9	2693228	2693229	chr9:2693229:C:T	rs77210048	C	T	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	3028711	3028712	chr9:3028712:T:C	rs183803699	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr9	3040925	3040926	chr9:3040926:C:A	rs72696751	C	A	T	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	3187964	3187965	chr9:3187965:T:A	rs716252	T	A	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	3674939	3674940	chr9:3674940:T:C	rs7021566	T	C	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	3955128	3955129	chr9:3955129:G:A	rs141648678	G	A	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	3961491	3961492	chr9:3961492:G:A	rs635171	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	3962982	3962983	chr9:3962983:A:C	rs789263	A	C	A	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr9	4084842	4084843	chr9:4084843:A:G	rs10283708	A	G	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	4137978	4137979	chr9:4137979:A:G	rs138030514	A	G	A	Hoxc9_MA0485.1	29	0	-	0	0	.
chr9	4258534	4258535	chr9:4258535:G:A	rs7857343	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	4258665	4258666	chr9:4258666:A:C	rs141526891	A	C	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	4510508	4510509	chr9:4510509:A:G	rs35815316	A	G	A	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr9	4514962	4514963	chr9:4514963:G:C	rs4008488	G	C	G	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	4594722	4594723	chr9:4594723:C:T	rs181873746	C	T	C	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr9	4792555	4792556	chr9:4792556:C:T	rs180814296	C	T	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	4793797	4793798	chr9:4793798:G:T	rs296847	G	T	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	5114772	5114773	chr9:5114773:C:T	rs17425819	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr9	5292256	5292257	chr9:5292257:T:C	rs1407374	T	C	C	Hoxc9_MA0485.1	5	1	+	9.374323313319083	4.889011950680597	AACCATAAATTAT
chr9	5392270	5392271	chr9:5392271:G:A	rs3739638	G	A	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	5440427	5440428	chr9:5440428:A:C	rs62559127	A	C	A	Hoxc9_MA0485.1	30	0	-	0	0	.
chr9	5447226	5447227	chr9:5447227:A:G	rs34477738	A	G	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	5632720	5632721	chr9:5632721:A:G	rs4740823	A	G	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	5884280	5884281	chr9:5884281:T:C	rs10758717	T	C	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	5971976	5971977	chr9:5971977:A:G	rs10815327	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	6153707	6153708	chr9:6153708:C:A	rs60831665	C	A	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	6696458	6696459	chr9:6696459:T:C	rs820512	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr9	6955599	6955600	chr9:6955600:A:C	chr9:6955600:A:C	A	C	A	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	6974142	6974143	chr9:6974143:A:T	rs118151996	A	T	A	Hoxc9_MA0485.1	0	1	+	8.38694774150228	7.864398123127528	ATCCATAAATTAG
chr9	6986290	6986291	chr9:6986291:C:G	rs3750488	C	G	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	7058373	7058374	chr9:7058374:C:A	rs4742295	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	7088521	7088522	chr9:7088522:G:A	rs10815513	G	A	G	Hoxc9_MA0485.1	10	1	-	7.89685378916779	6.093017884859038	GGCTACAAATCAT
chr9	7088526	7088527	chr9:7088527:G:C	rs10739115	G	C	C	Hoxc9_MA0485.1	5	1	-	7.89685378916779	5.483622176086681	GGCTACAAATCAT
chr9	7208827	7208828	chr9:7208828:G:C	rs10815550	G	C	G	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	7368226	7368227	chr9:7368227:T:C	rs138032033	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	7500652	7500653	chr9:7500653:A:C	rs17613065	A	C	A	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr9	7577574	7577575	chr9:7577575:T:G	rs72695146	T	G	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	7658013	7658014	chr9:7658014:C:A	rs151145378	C	A	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr9	7960586	7960587	chr9:7960587:G:A	rs60520833	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	7974207	7974208	chr9:7974208:C:T	rs7029961	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	7981072	7981073	chr9:7981073:T:C	rs145208196	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	8176621	8176622	chr9:8176622:T:C	rs10733543	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	8222318	8222319	chr9:8222319:A:G	rs9408735	A	G	A	Hoxc9_MA0485.1	7	1	+	7.382112959373483	0.4778838901679051	TGCTGTCAATCTC
chr9	8264660	8264661	chr9:8264661:C:T	rs10976895	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr9	8287603	8287604	chr9:8287604:C:G	rs1909760	C	G	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr9	8628520	8628521	chr9:8628521:G:A	rs12686394	G	A	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	8700192	8700193	chr9:8700193:T:C	rs4442186	T	C	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	8937477	8937478	chr9:8937478:C:T	rs10511514	C	T	C	Hoxc9_MA0485.1	3	1	+	10.373975870851593	9.485723097828972	TGTCATAAATCAG
chr9	9041783	9041784	chr9:9041784:G:A	rs16928808	G	A	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	9400176	9400177	chr9:9400177:A:C	rs1412722	A	C	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	9469400	9469401	chr9:9469401:C:G	rs117236404	C	G	C	Hoxc9_MA0485.1	10	1	+	8.479248367237503	3.6781775594902255	AGCCTTAAATCAA
chr9	9499125	9499126	chr9:9499126:G:A	rs2382019	G	A	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	9662427	9662428	chr9:9662428:T:A	rs10759084	T	A	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	9730365	9730366	chr9:9730366:C:T	rs1934268	C	T	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr9	9812857	9812858	chr9:9812858:C:G	rs1768866	C	G	C	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	10251491	10251492	chr9:10251492:A:T	rs1322148	A	T	T	Hoxc9_MA0485.1	5	1	-	9.036015162752266	2.137472187032669	TGTTGTAAATCAC
chr9	10251589	10251590	chr9:10251590:C:G	rs140560214	C	G	c	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	10251602	10251603	chr9:10251603:C:T	rs2498608	C	T	C	Hoxc9_MA0485.1	10	1	+	8.797836868285943	6.99400096397719	TATAATAAATCAC
chr9	10759346	10759347	chr9:10759347:A:G	rs16926427	A	G	A	Hoxc9_MA0485.1	5	1	-	8.633192851837478	4.1478814891989915	GCCCATGAATCAG
chr9	11197937	11197938	chr9:11197938:C:A	rs12376574	C	A	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	11962517	11962518	chr9:11962518:C:T	rs77671050	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr9	11962559	11962560	chr9:11962560:C:T	rs58275674	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	12678623	12678624	chr9:12678624:C:A	rs7848943	C	A	C	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	12678651	12678652	chr9:12678652:G:C	rs7849172	G	C	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr9	12814432	12814433	chr9:12814433:A:T	rs80103914	A	T	A	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr9	12819540	12819541	chr9:12819541:T:C	rs57418392	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	12819591	12819592	chr9:12819592:A:T	rs78447550	A	T	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	13141786	13141787	chr9:13141787:T:G	rs7857362	T	G	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	13141787	13141788	chr9:13141788:C:A	rs7871112	C	A	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	13141804	13141805	chr9:13141805:T:C	rs142550834	T	C	T	Hoxc9_MA0485.1	7	1	-	7.859249769736157	0.9550207005305789	GCCCTTAAATCTC
chr9	13323494	13323495	chr9:13323495:C:A	rs7866658	C	A	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	13333297	13333298	chr9:13333298:C:A	rs12342234	C	A	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	13352297	13352298	chr9:13352298:G:A	rs1147779	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr9	13715520	13715521	chr9:13715521:A:G	rs1475671	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	13747112	13747113	chr9:13747113:T:C	rs74756069	T	C	t	Hoxc9_MA0485.1	16	0	-	0	0	.
chr9	13759671	13759672	chr9:13759672:T:G	rs76213778	T	G	T	Hoxc9_MA0485.1	18	0	+	0	0	.
chr9	13904860	13904861	chr9:13904861:G:A	rs10961296	G	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	13941635	13941636	chr9:13941636:C:T	rs117419276	C	T	C	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	14362342	14362343	chr9:14362343:C:T	rs114045065	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	14396132	14396133	chr9:14396133:C:T	rs16931701	C	T	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	14480793	14480794	chr9:14480794:G:A	rs10961537	G	A	G	Hoxc9_MA0485.1	1	1	+	9.294615534495325	7.735171960585265	GGAAATAAATCTG
chr9	14480821	14480822	chr9:14480822:G:A	rs303751	G	A	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	14564155	14564156	chr9:14564156:G:C	rs10733284	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	14616521	14616522	chr9:14616522:G:A	rs4741412	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr9	14655281	14655282	chr9:14655282:G:A	rs10961638	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	14825710	14825711	chr9:14825711:A:G	rs2493630	A	G	A	Hoxc9_MA0485.1	8	1	+	8.329663633836667	1.4277051237017075	AGTCATCAATCTT
chr9	14942207	14942208	chr9:14942208:A:G	chr9:14942208:A:G	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	15078080	15078081	chr9:15078081:T:A	rs4741451	T	A	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	15293947	15293948	chr9:15293948:C:T	rs6474902	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr9	15306293	15306294	chr9:15306294:A:C	rs10810374	A	C	A	Hoxc9_MA0485.1	7	1	+	9.863167214698093	2.958938145492516	GTCAATAAATCAA
chr9	15714659	15714660	chr9:15714660:C:T	rs7847144	C	T	C	Hoxc9_MA0485.1	4	1	-	8.630256500052477	9.79802021404406	TACCGTAAATCTT
chr9	15870720	15870721	chr9:15870721:G:C	rs770205	G	C	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	16019791	16019792	chr9:16019792:T:C	rs10962256	T	C	T	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	16023507	16023508	chr9:16023508:T:C	rs112481433	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	16040317	16040318	chr9:16040318:C:G	rs79015806	C	G	C	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	16209290	16209291	chr9:16209291:C:A	rs114280444	C	A	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr9	16266733	16266734	chr9:16266734:C:T	rs7857514	C	T	C	Hoxc9_MA0485.1	2	1	+	10.041721877832162	8.664703400670938	TGCCATCAATCAT
chr9	16505467	16505468	chr9:16505468:C:G	rs191922154	C	G	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	16510796	16510797	chr9:16510797:G:A	rs7848696	G	A	G	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr9	16510806	16510807	chr9:16510807:C:T	rs7848584	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	16575600	16575601	chr9:16575601:A:C	rs114651003	A	C	A	Hoxc9_MA0485.1	15	0	+	0	0	.
chr9	16654002	16654003	chr9:16654003:T:C	rs147988439	T	C	T	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	16654037	16654038	chr9:16654038:C:A	rs76914288	C	A	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr9	16817721	16817722	chr9:16817722:G:T	rs55933102	G	T	G	Hoxc9_MA0485.1	10	1	-	8.628596449624606	5.944596115750659	AGCTGTAAATCCT
chr9	16876296	16876297	chr9:16876297:T:G	rs12350807	T	G	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	17580197	17580198	chr9:17580198:T:C	rs146817496	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	17657364	17657365	chr9:17657365:T:G	rs7866898	T	G	G	Hoxc9_MA0485.1	4	1	-	7.042553649414269	1.9046269681646102	GCCCACAAATCTC
chr9	17718072	17718073	chr9:17718073:G:A	rs12550865	G	A	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	17758128	17758129	chr9:17758129:C:T	rs190487788	C	T	C	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	17839308	17839309	chr9:17839309:A:C	rs7019050	A	C	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr9	17963941	17963942	chr9:17963942:G:A	rs1329914	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr9	18327285	18327286	chr9:18327286:C:T	rs4291363	C	T	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	18464122	18464123	chr9:18464123:C:G	rs536841250	C	G	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr9	18606769	18606770	chr9:18606770:C:A	rs1889008	C	A	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	18606793	18606794	chr9:18606794:C:G	chr9:18606794:C:G	C	G	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	18708729	18708730	chr9:18708730:C:T	rs10963731	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr9	18795927	18795928	chr9:18795928:C:T	rs4453328	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr9	18903751	18903752	chr9:18903752:C:G	rs10811058	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	18977075	18977076	chr9:18977076:G:A	rs73431254	G	A	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	19136367	19136368	chr9:19136368:C:A	rs9695394	C	A	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	19154573	19154574	chr9:19154574:A:G	rs10964006	A	G	a	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	19246291	19246292	chr9:19246292:C:T	rs7035784	C	T	c	Hoxc9_MA0485.1	30	0	-	0	0	.
chr9	19247047	19247048	chr9:19247048:C:T	rs35848970	C	T	C	Hoxc9_MA0485.1	3	1	+	7.937239806425574	7.048987033402949	ATCCGTAAATTAC
chr9	19285651	19285652	chr9:19285652:C:T	rs10757050	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	19455289	19455290	chr9:19455290:T:A	rs7034672	T	A	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	19474358	19474359	chr9:19474359:T:C	rs7867604	T	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	19759005	19759006	chr9:19759006:G:A	rs13296551	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	19913351	19913352	chr9:19913352:C:G	rs72692011	C	G	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr9	19913461	19913462	chr9:19913462:A:G	rs12378863	A	G	A	Hoxc9_MA0485.1	9	1	-	7.853673064052789	0.9654472496791571	AGCCCTAAATCAC
chr9	19922655	19922656	chr9:19922656:T:G	rs4275300	T	G	T	Hoxc9_MA0485.1	5	1	+	8.62124640848406	1.7227034327644637	CACTGTAAATCAC
chr9	19927730	19927731	chr9:19927731:C:T	rs996671662	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	19946552	19946553	chr9:19946553:G:A	rs55981614	G	A	G	Hoxc9_MA0485.1	4	1	+	9.546336678485925	10.714100392477508	AACCGTAAATCAG
chr9	19982456	19982457	chr9:19982457:T:C	rs12057044	T	C	T	Hoxc9_MA0485.1	4	1	-	10.469211014931497	9.301447300939914	TGCTATAAATCTT
chr9	20783283	20783284	chr9:20783284:G:A	rs10964696	G	A	A	Hoxc9_MA0485.1	4	1	+	7.92680867249627	9.094572386487854	GGCTGTAAATATC
chr9	20896899	20896900	chr9:20896900:G:A	rs4474106	G	A	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	21679152	21679153	chr9:21679153:A:G	rs6475544	A	G	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	21746976	21746977	chr9:21746977:A:T	rs7853131	A	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	22362742	22362743	chr9:22362743:C:T	rs10738623	C	T	C	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr9	22383816	22383817	chr9:22383817:A:G	rs4452893	A	G	A	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	22864124	22864125	chr9:22864125:T:C	rs7025663	T	C	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	23005955	23005956	chr9:23005956:T:C	rs117452802	T	C	T	Hoxc9_MA0485.1	8	1	-	8.16411426999724	1.26215575986228	AGAAATCAATCAC
chr9	23484920	23484921	chr9:23484921:A:G	rs274931	A	G	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	23581458	23581459	chr9:23581459:T:A	rs10965937	T	A	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	23670312	23670313	chr9:23670313:C:T	rs1410842	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	23686350	23686351	chr9:23686351:A:C	rs7873964	A	C	A	Hoxc9_MA0485.1	11	1	-	10.151313743013402	6.596369729354056	ACCCATAAATCTA
chr9	23831659	23831660	chr9:23831660:T:C	rs10966092	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	24088808	24088809	chr9:24088809:T:C	rs41370445	T	C	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr9	24159116	24159117	chr9:24159117:G:A	rs17176228	G	A	G	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	24649222	24649223	chr9:24649223:C:G	rs1332675	C	G	C	Hoxc9_MA0485.1	12	1	+	7.648464208488747	6.93040842957387	GCCCATAAATACC
chr9	25133204	25133205	chr9:25133205:T:C	rs3118270	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	25545625	25545626	chr9:25545626:G:A	rs4354395	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr9	25570974	25570975	chr9:25570975:C:T	rs117882910	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	25700767	25700768	chr9:25700768:C:G	rs114873246	C	G	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	25751462	25751463	chr9:25751463:C:T	rs17290832	C	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	26033546	26033547	chr9:26033547:T:G	rs74467602	T	G	T	Hoxc9_MA0485.1	3	1	-	9.306970670261693	10.041721877832162	TGCAATCAATCAT
chr9	26303274	26303275	chr9:26303275:G:T	rs62543080	G	T	G	Hoxc9_MA0485.1	2	1	-	9.531052839289195	7.611649866885439	TGCCATAAATAAT
chr9	26565215	26565216	chr9:26565216:A:C	rs1328426	A	C	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	26673449	26673450	chr9:26673450:C:T	rs78015886	C	T	C	Hoxc9_MA0485.1	0	1	-	9.137743857361976	8.604928724070973	GGCCTTAAATCAG
chr9	26673456	26673457	chr9:26673457:T:C	rs74625255	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr9	26775731	26775732	chr9:26775732:T:C	rs57209791	T	C	T	Hoxc9_MA0485.1	5	1	+	8.835776334721379	4.350464972082893	GCCTATAAATTTC
chr9	27053428	27053429	chr9:27053429:T:G	rs10812522	T	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	27126695	27126696	chr9:27126696:A:C	rs140741617	A	C	A	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	27232001	27232002	chr9:27232002:A:G	rs7854364	A	G	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr9	27427549	27427550	chr9:27427550:G:A	rs141580990	G	A	G	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr9	27520151	27520152	chr9:27520152:C:A	rs75689394	C	A	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	27621927	27621928	chr9:27621928:G:A	rs10812625	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	27659776	27659777	chr9:27659777:C:T	rs759420023	C	T	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	27696929	27696930	chr9:27696930:G:A	rs7039566	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	28207701	28207702	chr9:28207702:T:A	rs73445990	T	A	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	28300371	28300372	chr9:28300372:G:A	rs67652289	G	A	G	Hoxc9_MA0485.1	1	1	+	9.175122401054722	7.61567882714466	CGCTATCAATCAC
chr9	28396246	28396247	chr9:28396247:C:T	rs28409695	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	28396252	28396253	chr9:28396253:A:G	rs10968558	A	G	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr9	28430174	28430175	chr9:28430175:G:T	rs2026372	G	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	28678500	28678501	chr9:28678501:T:C	rs10968713	T	C	T	Hoxc9_MA0485.1	8	1	-	9.605172794193496	2.703214284058538	GGATATAAATCTT
chr9	28847405	28847406	chr9:28847406:C:T	rs1041459700	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	28856647	28856648	chr9:28856648:A:G	rs824410	A	G	A	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	28900277	28900278	chr9:28900278:C:G	rs2164075	C	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	28900296	28900297	chr9:28900297:A:T	rs2164074	A	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	28919266	28919267	chr9:28919267:A:G	rs4879279	A	G	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	28929627	28929628	chr9:28929628:G:T	rs7870709	G	T	T	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	29434541	29434542	chr9:29434542:C:T	rs7861521	C	T	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	29834366	29834367	chr9:29834367:A:G	rs112224552	A	G	A	Hoxc9_MA0485.1	4	1	+	8.299100334218693	7.13133662022711	TCACATAAATCTT
chr9	30035806	30035807	chr9:30035807:G:A	rs77975438	G	A	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	30077006	30077007	chr9:30077007:G:A	rs2360147	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	30239795	30239796	chr9:30239796:T:G	rs10969595	T	G	T	Hoxc9_MA0485.1	11	1	-	10.021353779995012	7.968363925095931	TACTATAAATCAC
chr9	31279599	31279600	chr9:31279600:C:T	rs78455716	C	T	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	31598413	31598414	chr9:31598414:T:C	rs35037448	T	C	C	Hoxc9_MA0485.1	2	1	+	8.743631878038578	10.120650355199801	ACTTATAAATCAA
chr9	32166112	32166113	chr9:32166113:G:A	rs10970823	G	A	G	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	32502945	32502946	chr9:32502946:A:C	rs658253	A	C	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	32728429	32728430	chr9:32728430:T:G	rs12552298	T	G	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	32728464	32728465	chr9:32728465:A:G	rs12553526	A	G	A	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	32875174	32875175	chr9:32875175:C:A	rs74585469	C	A	C	Hoxc9_MA0485.1	16	0	+	0	0	.
chr9	33013944	33013945	chr9:33013945:G:C	rs10971314	G	C	C	Hoxc9_MA0485.1	4	1	+	9.89275322745534	5.9225902601972695	GGCTGTAAATCTG
chr9	33013963	33013964	chr9:33013964:G:A	rs10971316	G	A	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	33141753	33141754	chr9:33141754:G:A	rs2770807	G	A	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr9	33141792	33141793	chr9:33141793:C:T	rs10813955	C	T	c	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	33225730	33225731	chr9:33225731:T:C	rs73474586	T	C	T	Hoxc9_MA0485.1	4	1	-	10.221623833045	9.053860119053414	ACTCATAAATCAT
chr9	33294092	33294093	chr9:33294093:C:T	rs831287	C	T	T	Hoxc9_MA0485.1	2	1	-	7.512949714753982	8.289430884071535	GGGTATCAATCAT
chr9	33485806	33485807	chr9:33485807:T:C	rs149179152	T	C	t	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	33657526	33657527	chr9:33657527:T:C	chr9:33657527:T:C	T	C	.	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	33661287	33661288	chr9:33661288:A:G	rs1856202	A	G	.	Hoxc9_MA0485.1	14	0	+	0	0	.
chr9	33731380	33731381	chr9:33731381:T:C	rs1769723	T	C	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	33742261	33742262	chr9:33742262:C:G	rs2734595	C	G	C	Hoxc9_MA0485.1	6	1	-	7.828535808480775	8.689410279659212	TGCTATGAATCAG
chr9	33749364	33749365	chr9:33749365:G:C	rs855584	G	C	g	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr9	33951277	33951278	chr9:33951278:A:G	rs66843344	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	33952154	33952155	chr9:33952155:G:A	rs10971818	G	A	G	Hoxc9_MA0485.1	14	0	+	0	0	.
chr9	34023573	34023574	chr9:34023574:C:T	rs1785502	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	34271687	34271688	chr9:34271688:C:T	rs10123931	C	T	C	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	34419753	34419754	chr9:34419754:G:C	rs10972105	G	C	G	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	34558284	34558285	chr9:34558285:G:A	rs112111678	G	A	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	34570991	34570992	chr9:34570992:C:T	rs1055347	C	T	C	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	34571014	34571015	chr9:34571015:T:G	rs60547279	T	G	T	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	34734588	34734589	chr9:34734589:C:T	rs573957130	C	T	C	Hoxc9_MA0485.1	12	1	+	13.524414878593449	13.270417924828896	GGCCATAAATCAC
chr9	35640252	35640253	chr9:35640253:C:G	rs10972538	C	G	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	35640296	35640297	chr9:35640297:C:T	rs10972539	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	35854439	35854440	chr9:35854440:A:C	rs7035913	A	C	C	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	36215812	36215813	chr9:36215813:T:C	rs1254216028	T	C	T	Hoxc9_MA0485.1	8	1	-	9.23933819987815	2.33737968974319	AGCCATGAATCAG
chr9	36329302	36329303	chr9:36329303:G:A	rs4300086	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	36570518	36570519	chr9:36570519:A:G	rs329356	A	G	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	36748590	36748591	chr9:36748591:G:A	rs146086213	G	A	G	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	36748592	36748593	chr9:36748593:G:C	rs28619372	G	C	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr9	36806705	36806706	chr9:36806706:G:A	rs117289211	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	36882143	36882144	chr9:36882144:T:C	rs2277143	T	C	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	36967065	36967066	chr9:36967066:C:T	rs1320473	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	36981824	36981825	chr9:36981825:T:C	rs12554848	T	C	T	Hoxc9_MA0485.1	5	1	+	10.45290639668189	5.9675950340434065	GTCAATAAATCAT
chr9	37403048	37403049	chr9:37403049:C:T	rs68060045	C	T	c	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	37413005	37413006	chr9:37413006:T:C	rs17411255	T	C	T	Hoxc9_MA0485.1	11	1	-	7.465429137845894	3.0528957389775258	GCCCGTGAATCAG
chr9	37620429	37620430	chr9:37620430:T:C	rs79734737	T	C	T	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	37708842	37708843	chr9:37708843:T:C	rs6476660	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	37752949	37752950	chr9:37752950:T:C	rs7873440	T	C	C	Hoxc9_MA0485.1	2	1	+	9.245694103222428	10.622712580383652	TGTAATAAATCTT
chr9	37752968	37752969	chr9:37752969:C:T	rs186996030	C	T	C	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	37938603	37938604	chr9:37938604:C:T	rs146579423	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr9	37938604	37938605	chr9:37938605:G:A	rs545741617	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	37998141	37998142	chr9:37998142:A:T	rs180808510	A	T	A	Hoxc9_MA0485.1	0	1	-	8.360043785014408	8.882593403389158	TGCTGTAAATCCC
chr9	38031800	38031801	chr9:38031801:A:C	rs942935949	A	C	A	Hoxc9_MA0485.1	11	1	+	11.614581268141224	9.561591413242143	AGTCATAAATCAC
chr9	38039691	38039692	chr9:38039692:C:T	rs60164931	C	T	C	Hoxc9_MA0485.1	30	0	+	0	0	.
chr9	38047712	38047713	chr9:38047713:G:A	rs11790106	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr9	38076570	38076571	chr9:38076571:G:A	rs139693736	G	A	G	Hoxc9_MA0485.1	16	0	+	0	0	.
chr9	38186434	38186435	chr9:38186435:A:G	rs10973692	A	G	A	Hoxc9_MA0485.1	5	1	-	8.20899890396518	3.723687541326694	GCCTATGAATCAT
chr9	38436994	38436995	chr9:38436995:G:T	rs769153	G	T	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	38673914	38673915	chr9:38673915:A:C	rs16931494	A	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	38689943	38689944	chr9:38689944:C:T	rs57803500	C	T	C	Hoxc9_MA0485.1	20	0	+	0	0	.
chr9	38724959	38724960	chr9:38724960:T:C	rs73454434	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr9	38733082	38733083	chr9:38733083:T:C	rs10758522	T	C	T	Hoxc9_MA0485.1	6	1	-	9.222222184934639	6.188016418425218	GGGTATAAATCAG
chr9	40935570	40935571	chr9:40935571:G:A	rs1260361194	G	A	.	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	40935576	40935577	chr9:40935577:G:A	rs1312962314	G	A	.	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	40988532	40988533	chr9:40988533:T:C	rs878971093	T	C	.	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	42243335	42243336	chr9:42243336:G:A	rs3124904	G	A	g	Hoxc9_MA0485.1	2	1	-	8.927460407844725	7.550441930683499	TGCCATAAATATC
chr9	42267258	42267259	chr9:42267259:A:G	rs10737134	A	G	a	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr9	42328044	42328045	chr9:42328045:G:C	rs4119816	G	C	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	42947231	42947232	chr9:42947232:A:G	rs75458714	A	G	.	Hoxc9_MA0485.1	5	1	-	7.9589615572556225	3.4736501946171363	TTCCATCAATCAT
chr9	61868011	61868012	chr9:61868012:G:A	rs200212556	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	62814657	62814658	chr9:62814658:C:T	rs7026273	C	T	.	Hoxc9_MA0485.1	0	1	+	8.409063900908302	8.641407558427671	CGCCATAAAACAC
chr9	65480754	65480755	chr9:65480755:C:T	rs34221706	C	T	.	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	65562792	65562793	chr9:65562793:T:C	rs1266723446	T	C	.	Hoxc9_MA0485.1	0	1	-	9.019206917999611	9.552022051290614	AGACATAAATCCC
chr9	67112074	67112075	chr9:67112075:C:T	rs3852377	C	T	C	Hoxc9_MA0485.1	-9	0	-	0	0	.
chr9	67171795	67171796	chr9:67171796:A:G	rs62565330	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	68538443	68538444	chr9:68538444:C:G	rs186742780	C	G	C	Hoxc9_MA0485.1	15	0	+	0	0	.
chr9	68553383	68553384	chr9:68553384:T:C	rs117812064	T	C	T	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	68867903	68867904	chr9:68867904:T:C	rs7870383	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	68934225	68934226	chr9:68934226:A:G	rs17059238	A	G	A	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr9	68949769	68949770	chr9:68949770:G:A	rs79037883	G	A	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr9	69017164	69017165	chr9:69017165:C:T	rs4745523	C	T	C	Hoxc9_MA0485.1	26	0	-	0	0	.
chr9	69097307	69097308	chr9:69097308:C:T	rs11790543	C	T	C	Hoxc9_MA0485.1	3	1	+	10.221623833045	9.333371060022374	ACTCATAAATCAT
chr9	69326840	69326841	chr9:69326841:G:A	rs11138139	G	A	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	69392565	69392566	chr9:69392566:C:A	rs10453247	C	A	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr9	69452856	69452857	chr9:69452857:A:G	rs67511308	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	69461489	69461490	chr9:69461490:A:G	rs28564328	A	G	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	69673006	69673007	chr9:69673007:T:G	rs758479324	T	G	T	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr9	69868426	69868427	chr9:69868427:G:C	rs10868225	G	C	G	Hoxc9_MA0485.1	0	1	+	8.587694190521978	7.299985781336853	GGCAGTGAATCAC
chr9	69945954	69945955	chr9:69945955:G:A	rs11140986	G	A	A	Hoxc9_MA0485.1	16	0	-	0	0	.
chr9	70053951	70053952	chr9:70053952:T:C	rs72709197	T	C	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	70303974	70303975	chr9:70303975:T:C	rs11998951	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	70362356	70362357	chr9:70362357:T:C	rs10780924	T	C	T	Hoxc9_MA0485.1	4	1	-	10.174088217155441	9.006324503163857	ATCAATAAATCAC
chr9	70878811	70878812	chr9:70878812:G:A	rs1890016	G	A	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	71076266	71076267	chr9:71076267:C:T	rs11142684	C	T	C	Hoxc9_MA0485.1	0	1	+	7.596192150961406	7.828535808480775	CGCTATGAATCAG
chr9	71121980	71121981	chr9:71121981:T:C	rs143970020	T	C	T	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	71130667	71130668	chr9:71130668:T:C	rs10868952	T	C	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	71663531	71663532	chr9:71663532:A:G	rs114117259	A	G	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	71781227	71781228	chr9:71781228:G:A	rs12553246	G	A	G	Hoxc9_MA0485.1	1	1	+	7.812299864622648	6.252856290712585	CGCAGTAAATTAG
chr9	71937317	71937318	chr9:71937318:G:A	rs17491074	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	72035540	72035541	chr9:72035541:G:A	rs10114298	G	A	g	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	72041855	72041856	chr9:72041856:C:G	rs12003806	C	G	c	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr9	72210790	72210791	chr9:72210791:T:C	rs11143170	T	C	T	Hoxc9_MA0485.1	11	1	-	12.131457443497224	7.718924044628856	GCCCATAAATCAT
chr9	72354645	72354646	chr9:72354646:A:G	rs149082916	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	72358431	72358432	chr9:72358432:A:G	rs3012504	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	72537402	72537403	chr9:72537403:G:T	rs4532664	G	T	g	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	72616174	72616175	chr9:72616175:A:T	rs116551637	A	T	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	72983662	72983663	chr9:72983663:C:T	rs7854009	C	T	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	72987986	72987987	chr9:72987987:A:G	rs7856728	A	G	G	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	73141927	73141928	chr9:73141928:C:T	rs62541549	C	T	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr9	73149813	73149814	chr9:73149814:G:A	rs986269250	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	73719815	73719816	chr9:73719816:C:T	rs11143673	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	74269182	74269183	chr9:74269183:A:T	rs10869370	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	74275350	74275351	chr9:74275351:A:C	rs10869373	A	C	A	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	74551485	74551486	chr9:74551486:C:T	rs75657768	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	74847944	74847945	chr9:74847945:C:G	rs57588830	C	G	C	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr9	75068181	75068182	chr9:75068182:C:T	rs150281650	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	75528234	75528235	chr9:75528235:A:T	rs1332519	A	T	A	Hoxc9_MA0485.1	5	1	-	8.57409122564969	1.6755482499300935	GGACATCAATCTC
chr9	75669947	75669948	chr9:75669948:C:G	rs943866	C	G	C	Hoxc9_MA0485.1	10	1	+	8.33423634165083	3.533165533903552	AGCATTAAATCAT
chr9	75671624	75671625	chr9:75671625:A:G	rs114892023	A	G	A	Hoxc9_MA0485.1	12	1	-	9.278591122091859	9.532588075856411	TATCATAAATCAT
chr9	75754253	75754254	chr9:75754254:G:A	rs76106325	G	A	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	75911562	75911563	chr9:75911563:A:T	rs183409929	A	T	A	Hoxc9_MA0485.1	6	1	+	10.337445565328224	6.808721099790705	AGAAATAAATCAC
chr9	76044314	76044315	chr9:76044315:G:C	rs10869684	G	C	C	Hoxc9_MA0485.1	3	1	-	8.794697420073753	3.2783009480880616	AAACATAAATCAG
chr9	76163633	76163634	chr9:76163634:C:T	rs10781342	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	76226484	76226485	chr9:76226485:G:T	rs10746997	G	T	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	76333445	76333446	chr9:76333446:A:G	rs1908497	A	G	N	Hoxc9_MA0485.1	0	1	+	8.06766050030072	8.600475633591723	ACCTATAAATCCA
chr9	76591786	76591787	chr9:76591787:G:T	chr9:76591787:G:T	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	76595120	76595121	chr9:76595121:G:C	rs13296594	G	C	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	76725199	76725200	chr9:76725200:A:G	rs4744805	A	G	G	Hoxc9_MA0485.1	-6	0	-	0	0	.
chr9	76867060	76867061	chr9:76867061:G:A	rs114658846	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr9	76943311	76943312	chr9:76943312:A:T	rs12001088	A	T	A	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	77164174	77164175	chr9:77164175:T:C	rs11145308	T	C	T	Hoxc9_MA0485.1	28	0	-	0	0	.
chr9	77535259	77535260	chr9:77535260:T:C	rs11145468	T	C	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	77664147	77664148	chr9:77664148:A:G	rs77470066	A	G	A	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	77678139	77678140	chr9:77678140:G:T	rs145925840	G	T	T	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	77678158	77678159	chr9:77678159:C:T	rs11793204	C	T	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	77953767	77953768	chr9:77953768:T:C	rs116260555	T	C	T	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr9	78132080	78132081	chr9:78132081:T:C	rs184288223	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	78449459	78449460	chr9:78449460:C:T	rs909093804	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	78449482	78449483	chr9:78449483:G:A	rs10780237	G	A	G	Hoxc9_MA0485.1	2	1	-	9.456799566532288	8.079781089371064	TACAATAAATCAG
chr9	78505986	78505987	chr9:78505987:G:C	rs2993701	G	C	C	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr9	78676923	78676924	chr9:78676924:T:A	rs58292800	T	A	T	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	78676930	78676931	chr9:78676931:A:T	rs57827337	A	T	A	Hoxc9_MA0485.1	11	1	-	8.818429337975266	9.676018723184288	AGCTATCAATCTT
chr9	78779049	78779050	chr9:78779050:A:C	rs9785281	A	C	A	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	79377577	79377578	chr9:79377578:T:G	rs141317023	T	G	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	79472154	79472155	chr9:79472155:C:G	rs10114722	C	G	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	79920967	79920968	chr9:79920968:A:G	rs267574	A	G	G	Hoxc9_MA0485.1	8	1	+	10.806967053942959	3.905008543808001	GCCAATAAATCAA
chr9	79956978	79956979	chr9:79956979:T:C	rs962882	T	C	T	Hoxc9_MA0485.1	12	1	-	8.325945715588292	8.451626072421762	AGAAGTAAATCAA
chr9	80466554	80466555	chr9:80466555:T:C	rs10867540	T	C	T	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	80602461	80602462	chr9:80602462:A:G	rs1410542	A	G	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	80798866	80798867	chr9:80798867:A:G	rs189315336	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	81040852	81040853	chr9:81040853:C:T	rs1412758	C	T	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr9	81223940	81223941	chr9:81223941:A:G	rs7869606	A	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	81250441	81250442	chr9:81250442:T:G	rs56318861	T	G	T	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	81394665	81394666	chr9:81394666:T:C	rs12348832	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	81398183	81398184	chr9:81398184:A:C	rs56201505	A	C	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	81398193	81398194	chr9:81398194:C:A	rs7048536	C	A	A	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	81398202	81398203	chr9:81398203:C:T	rs10867750	C	T	C	Hoxc9_MA0485.1	4	1	-	7.466441789883128	8.634205503874714	TCGCGTAAATCAC
chr9	81660792	81660793	chr9:81660793:G:T	rs72747288	G	T	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	81662183	81662184	chr9:81662184:A:G	rs73647843	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr9	81690019	81690020	chr9:81690020:G:C	rs114065597	G	C	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	81976578	81976579	chr9:81976579:A:C	rs547154199	A	C	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr9	82436790	82436791	chr9:82436791:A:G	rs11139569	A	G	G	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr9	82513638	82513639	chr9:82513639:A:G	rs11793868	A	G	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	82555736	82555737	chr9:82555737:G:A	rs117132816	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr9	82568080	82568081	chr9:82568081:C:T	rs1933016	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr9	82588742	82588743	chr9:82588743:A:G	rs78152369	A	G	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	82588777	82588778	chr9:82588778:G:A	rs149692330	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	82895706	82895707	chr9:82895707:T:C	rs72740822	T	C	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	83012624	83012625	chr9:83012625:A:C	rs10121395	A	C	A	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	83012638	83012639	chr9:83012639:C:T	rs4146961	C	T	T	Hoxc9_MA0485.1	3	1	+	8.522930717906014	7.634677944883392	CTTCATAAATCAT
chr9	83340758	83340759	chr9:83340759:C:A	rs4877755	C	A	C	Hoxc9_MA0485.1	4	1	-	7.776793047077738	5.275941518752723	ACCAGTCAATCAC
chr9	83347400	83347401	chr9:83347401:T:A	rs10746700	T	A	T	Hoxc9_MA0485.1	9	1	+	9.55674841006792	5.729105841567896	AGTCATAAATTAT
chr9	83611808	83611809	chr9:83611809:G:A	rs113275498	G	A	g	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr9	83809650	83809651	chr9:83809651:C:A	rs295284	C	A	c	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	84101957	84101958	chr9:84101958:A:G	rs10868097	A	G	A	Hoxc9_MA0485.1	8	1	+	7.5302758344146	0.6283173242796404	GCTAGTAAATCTG
chr9	84122110	84122111	chr9:84122111:G:T	rs73649315	G	T	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr9	84154322	84154323	chr9:84154323:A:G	rs76229563	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	84224431	84224432	chr9:84224432:C:T	rs77547820	C	T	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	84277732	84277733	chr9:84277733:G:A	rs41282425	G	A	G	Hoxc9_MA0485.1	10	1	-	9.441249972810242	7.6374140685014895	AGTCATCAATCAC
chr9	84285031	84285032	chr9:84285032:A:C	rs4877832	A	C	C	Hoxc9_MA0485.1	22	0	-	0	0	.
chr9	84331691	84331692	chr9:84331692:T:C	rs980292	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	84409531	84409532	chr9:84409532:G:C	rs12686300	G	C	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	84411266	84411267	chr9:84411267:A:G	rs7025645	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	84772706	84772707	chr9:84772707:A:G	rs1573219	A	G	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	84828271	84828272	chr9:84828272:G:A	rs10114276	G	A	A	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr9	84892016	84892017	chr9:84892017:T:G	rs11140799	T	G	T	Hoxc9_MA0485.1	11	1	-	10.152204919704348	8.099215064805266	GGAAATAAATCAG
chr9	84916873	84916874	chr9:84916874:G:C	rs75215432	G	C	G	Hoxc9_MA0485.1	3	1	-	9.509499181506683	3.9931027095209912	CACCGTAAATCAC
chr9	84987982	84987983	chr9:84987983:C:T	rs11795386	C	T	C	Hoxc9_MA0485.1	10	1	+	8.835571832891443	7.031735928582692	ACCCATCAATCAA
chr9	85025720	85025721	chr9:85025721:A:G	rs1387923	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	85025922	85025923	chr9:85025923:A:G	rs574814738	A	G	A	Hoxc9_MA0485.1	9	1	-	8.490913543470683	1.6026877290970507	AACTATAAATCCC
chr9	85284487	85284488	chr9:85284488:C:T	rs76641940	C	T	C	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr9	85428341	85428342	chr9:85428342:A:G	rs12555297	A	G	A	Hoxc9_MA0485.1	5	1	-	10.228460637150343	5.743149274511858	AGACATAAATCAA
chr9	85601307	85601308	chr9:85601308:G:A	rs7846814	G	A	G	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	85742355	85742356	chr9:85742356:A:C	rs879267028	A	C	.	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	85742358	85742359	chr9:85742359:C:T	rs556632749	C	T	.	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	85742360	85742361	chr9:85742361:C:T	rs771221621	C	T	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	85742605	85742606	chr9:85742606:T:C	rs117331900	T	C	.	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	85742623	85742624	chr9:85742624:T:G	rs114705022	T	G	.	Hoxc9_MA0485.1	1	1	-	8.811585470915455	9.232068563493844	AACAGTAAATCAG
chr9	85743428	85743429	chr9:85743429:G:A	rs115355804	G	A	.	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	86338606	86338607	chr9:86338607:C:T	rs1570587	C	T	C	Hoxc9_MA0485.1	1	1	+	9.955496261289479	9.011696422044615	CCCTATAAATCAT
chr9	86470415	86470416	chr9:86470416:A:T	rs448707	A	T	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	86640283	86640284	chr9:86640284:C:G	rs6559942	C	G	G	Hoxc9_MA0485.1	4	1	-	8.24879882145135	4.2786358541932765	ACCAGTAAATCTA
chr9	86684308	86684309	chr9:86684309:T:C	rs59997140	T	C	T	Hoxc9_MA0485.1	16	0	+	0	0	.
chr9	86842655	86842656	chr9:86842656:C:T	rs6559955	C	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	87147183	87147184	chr9:87147184:C:T	rs113610249	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	87439794	87439795	chr9:87439795:G:A	rs10780837	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	87495208	87495209	chr9:87495209:C:T	rs3758308	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	87659953	87659954	chr9:87659954:G:A	rs3128471	G	A	a	Hoxc9_MA0485.1	4	1	+	7.846668831671129	9.014432545662713	AGCCGTCAATTAC
chr9	88234503	88234504	chr9:88234504:G:A	rs1550285	G	A	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	88234516	88234517	chr9:88234517:C:A	rs1550284	C	A	A	Hoxc9_MA0485.1	1	1	+	8.02499669547075	7.604513602892362	ACCCATAAAACAC
chr9	88328388	88328389	chr9:88328389:G:T	chr9:88328389:G:T	G	T	G	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr9	88698302	88698303	chr9:88698303:T:C	rs9410241	T	C	T	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	88698343	88698344	chr9:88698344:G:A	rs9410242	G	A	A	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	88942154	88942155	chr9:88942155:T:A	rs28775298	T	A	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	88947020	88947021	chr9:88947021:T:C	rs11525966	T	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	89049900	89049901	chr9:89049901:G:T	rs72618184	G	T	G	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	89138884	89138885	chr9:89138885:G:C	rs10780224	G	C	C	Hoxc9_MA0485.1	10	1	-	8.580375501631803	3.7793046938845243	AGTCATGAATCAC
chr9	89283291	89283292	chr9:89283292:T:C	rs13298931	T	C	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr9	89490139	89490140	chr9:89490140:T:C	rs73653411	T	C	T	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	89540955	89540956	chr9:89540956:A:G	rs1854554	A	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	89769901	89769902	chr9:89769902:G:C	rs9696492	G	C	C	Hoxc9_MA0485.1	4	1	+	8.647132232961889	4.676969265703813	TGAAGTAAATCAC
chr9	89808417	89808418	chr9:89808418:G:T	rs73649348	G	T	T	Hoxc9_MA0485.1	2	1	+	7.988728794917506	9.30759445947759	AGGCATAAATCCT
chr9	89808428	89808429	chr9:89808429:C:G	rs149822097	C	G	C	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	89808433	89808434	chr9:89808434:G:C	rs114647645	G	C	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr9	89847826	89847827	chr9:89847827:G:C	rs1021957731	G	C	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	89870288	89870289	chr9:89870289:G:A	rs970074155	G	A	G	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	89884358	89884359	chr9:89884359:C:G	rs1011535979	C	G	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	89884377	89884378	chr9:89884378:A:G	rs1003567793	A	G	A	Hoxc9_MA0485.1	8	1	+	7.985705390817954	1.0837468806829942	TGCTGTCAATCAT
chr9	89929780	89929781	chr9:89929781:G:C	rs192941839	G	C	G	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr9	90340488	90340489	chr9:90340489:G:C	rs1012160	G	C	c	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	90340510	90340511	chr9:90340511:G:A	rs1012161	G	A	g	Hoxc9_MA0485.1	2	1	-	7.660195464418936	6.283176987257712	CACCATCAATCAA
chr9	90865822	90865823	chr9:90865823:A:G	rs2991215	A	G	G	Hoxc9_MA0485.1	21	0	-	0	0	.
chr9	91126815	91126816	chr9:91126816:A:G	rs10116437	A	G	G	Hoxc9_MA0485.1	2	1	+	8.030721370004967	7.25424020068741	ACAAGTAAATCAC
chr9	91167022	91167023	chr9:91167023:T:C	rs16907203	T	C	T	Hoxc9_MA0485.1	21	0	-	0	0	.
chr9	91197389	91197390	chr9:91197390:G:A	rs1317095771	G	A	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	91198669	91198670	chr9:91198670:G:C	rs12238485	G	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	91517119	91517120	chr9:91517120:C:T	rs10820865	C	T	T	Hoxc9_MA0485.1	1	1	-	9.829520288636443	8.270076714726383	AGCAATCAATCAT
chr9	91522509	91522510	chr9:91522510:G:C	rs12001758	G	C	G	Hoxc9_MA0485.1	2	1	-	8.75309467769103	6.057210535969721	TACAGTAAATCAT
chr9	91810388	91810389	chr9:91810389:G:A	rs77550788	G	A	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	91835363	91835364	chr9:91835364:G:A	rs7867707	G	A	G	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	92147687	92147688	chr9:92147688:G:A	rs370125660	G	A	G	Hoxc9_MA0485.1	3	1	-	7.465429137845894	6.577176364823271	GCCCGTGAATCAG
chr9	92165281	92165282	chr9:92165282:G:A	rs7035248	G	A	g	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	92427484	92427485	chr9:92427485:A:T	rs2007837	A	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	92440124	92440125	chr9:92440125:G:A	rs767038839	G	A	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	92546364	92546365	chr9:92546365:T:C	rs2007245	T	C	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	92801000	92801001	chr9:92801001:C:T	rs75406669	C	T	c	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	93020708	93020709	chr9:93020709:T:C	rs6479446	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr9	93597664	93597665	chr9:93597665:A:T	rs76904320	A	T	A	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	93881869	93881870	chr9:93881870:T:G	rs7855059	T	G	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	93881896	93881897	chr9:93881897:C:G	rs6479518	C	G	C	Hoxc9_MA0485.1	10	1	+	10.158653755233326	5.3575829474860495	TGCAATAAATCTG
chr9	94173237	94173238	chr9:94173238:C:T	rs146076319	C	T	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr9	94645714	94645715	chr9:94645715:A:G	rs10821376	A	G	A	Hoxc9_MA0485.1	3	1	-	9.065218681920834	9.953471454943456	GACTGTAAATCAA
chr9	94706136	94706137	chr9:94706137:A:G	rs116890132	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	94803034	94803035	chr9:94803035:A:G	rs356123	A	G	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	94945971	94945972	chr9:94945972:T:C	rs183185130	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	95074739	95074740	chr9:95074740:G:C	rs7042293	G	C	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	95093101	95093102	chr9:95093102:T:C	rs73654521	T	C	C	Hoxc9_MA0485.1	4	1	-	9.03991313000335	7.872149416011768	CCCCATAAATTAT
chr9	95093121	95093122	chr9:95093122:G:T	rs115345060	G	T	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	95704063	95704064	chr9:95704064:C:T	rs2782951	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr9	95704081	95704082	chr9:95704082:A:G	rs28608542	A	G	A	Hoxc9_MA0485.1	4	1	+	7.9184453643254	6.750681650333816	CGTTATAAATCCC
chr9	95737540	95737541	chr9:95737541:C:G	rs1077713	C	G	C	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	95832024	95832025	chr9:95832025:G:A	rs140940512	G	A	G	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr9	95832059	95832060	chr9:95832060:A:G	rs55699149	A	G	A	Hoxc9_MA0485.1	30	0	+	0	0	.
chr9	95852659	95852660	chr9:95852660:T:A	rs62559029	T	A	T	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	95876559	95876560	chr9:95876560:T:G	rs689697	T	G	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	95951313	95951314	chr9:95951314:C:T	rs117633833	C	T	C	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	96023234	96023235	chr9:96023235:G:A	rs114800090	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	96134282	96134283	chr9:96134283:A:G	rs62559830	A	G	A	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	96160971	96160972	chr9:96160972:G:A	rs12352431	G	A	G	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	96160985	96160986	chr9:96160986:A:G	rs10819930	A	G	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	96175379	96175380	chr9:96175380:T:C	rs10512241	T	C	T	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	96377624	96377625	chr9:96377625:C:T	rs114159946	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	96778215	96778216	chr9:96778216:T:C	chr9:96778216:T:C	T	C	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr9	96778227	96778228	chr9:96778228:G:A	rs78086749	G	A	G	Hoxc9_MA0485.1	10	1	-	11.125120130434752	9.321284226126	CGCCATAAATCTT
chr9	96875115	96875116	chr9:96875116:A:G	rs190570567	A	G	A	Hoxc9_MA0485.1	4	1	+	10.870260698619227	9.702496984627643	GGAAATAAATCAC
chr9	96875138	96875139	chr9:96875139:C:T	rs138334456	C	T	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	97851406	97851407	chr9:97851407:G:A	rs72753506	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	97851417	97851418	chr9:97851418:G:C	rs3758251	G	C	G	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	97986681	97986682	chr9:97986682:A:T	rs76408563	A	T	A	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	98102473	98102474	chr9:98102474:C:T	rs10985050	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	98250541	98250542	chr9:98250542:G:A	rs62574277	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.
chr9	98416346	98416347	chr9:98416347:C:A	rs4743221	C	A	a	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	98437442	98437443	chr9:98437443:A:G	rs12337248	A	G	A	Hoxc9_MA0485.1	8	1	+	7.566997741728559	0.6650392315935985	GTCCATCAATCTA
chr9	98458368	98458369	chr9:98458369:C:T	rs1930419	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr9	98572273	98572274	chr9:98572274:A:G	rs1167769	A	G	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr9	98687233	98687234	chr9:98687234:G:T	rs337530	G	T	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	98750752	98750753	chr9:98750753:C:T	rs961136784	C	T	C	Hoxc9_MA0485.1	10	1	+	8.309608180368741	6.5057722760599885	GCCAGTCAATCAC
chr9	98750762	98750763	chr9:98750763:A:C	rs990985926	A	C	A	Hoxc9_MA0485.1	20	0	+	0	0	.
chr9	98766803	98766804	chr9:98766804:T:C	rs7858893	T	C	T	Hoxc9_MA0485.1	5	1	+	8.411497777753057	3.9261864151145702	GAGCATAAATCTC
chr9	98782445	98782446	chr9:98782446:C:A	rs142837442	C	A	C	Hoxc9_MA0485.1	0	1	-	8.390054393460648	7.334689641794895	GGTTGTAAATCTA
chr9	98895614	98895615	chr9:98895615:C:A	rs927467	C	A	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	98983419	98983420	chr9:98983420:A:G	rs73653699	A	G	A	Hoxc9_MA0485.1	11	1	+	7.336823278316097	2.924289879447728	AGCAGTGAATCAG
chr9	99007384	99007385	chr9:99007385:G:A	rs73503720	G	A	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	99232020	99232021	chr9:99232021:A:G	rs17725572	A	G	A	Hoxc9_MA0485.1	2	1	-	9.064818395412177	10.4418368725734	TCTTATAAATCAC
chr9	99232032	99232033	chr9:99232033:C:T	rs17725597	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	99300867	99300868	chr9:99300868:C:A	rs1622127	C	A	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	99860490	99860491	chr9:99860491:G:A	rs759906590	G	A	G	Hoxc9_MA0485.1	26	0	-	0	0	.
chr9	100186937	100186938	chr9:100186938:A:G	rs10989004	A	G	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	100467055	100467056	chr9:100467056:T:C	rs61187274	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	100575121	100575122	chr9:100575122:T:C	rs2800282	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	100884709	100884710	chr9:100884710:C:A	rs16919581	C	A	C	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	101084970	101084971	chr9:101084971:G:A	rs35733350	G	A	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr9	101138723	101138724	chr9:101138724:A:G	rs116229342	A	G	A	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	101435494	101435495	chr9:101435495:C:T	rs515313	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	101533481	101533482	chr9:101533482:G:T	rs3818337	G	T	T	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	101533486	101533487	chr9:101533487:C:T	rs3818336	C	T	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	101533502	101533503	chr9:101533503:C:T	rs534370036	C	T	C	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	101590209	101590210	chr9:101590210:A:C	rs62575852	A	C	A	Hoxc9_MA0485.1	31	0	-	0	0	.
chr9	101590211	101590212	chr9:101590212:C:T	rs72745334	C	T	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr9	101970582	101970583	chr9:101970583:T:C	rs2860535	T	C	C	Hoxc9_MA0485.1	30	0	-	0	0	.
chr9	102077273	102077274	chr9:102077274:T:G	rs320287	T	G	G	Hoxc9_MA0485.1	5	1	+	10.144933810160795	3.246390834441204	GGCCATAAATTTG
chr9	102185958	102185959	chr9:102185959:G:T	rs112746114	G	T	G	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	102405561	102405562	chr9:102405562:A:G	rs74950806	A	G	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	102655433	102655434	chr9:102655434:C:T	rs10820223	C	T	C	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	102867634	102867635	chr9:102867635:A:C	rs843278	A	C	C	Hoxc9_MA0485.1	-15	0	-	0	0	.
chr9	102889033	102889034	chr9:102889034:C:T	rs2096226	C	T	T	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	104386435	104386436	chr9:104386436:A:G	rs144863409	A	G	A	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	104606135	104606136	chr9:104606136:A:G	rs10117926	A	G	A	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	104606159	104606160	chr9:104606160:A:G	rs57726274	A	G	A	Hoxc9_MA0485.1	4	1	+	12.636162105570826	11.468398391579242	GGCTATAAATCAC
chr9	104606177	104606178	chr9:104606178:G:C	rs73509725	G	C	G	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	104641761	104641762	chr9:104641762:T:C	rs1820386	T	C	T	Hoxc9_MA0485.1	9	1	+	8.830925348954224	1.9426995345805922	CACAATAAATCTT
chr9	104816196	104816197	chr9:104816197:C:T	rs2230807	C	T	C	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr9	104896103	104896104	chr9:104896104:G:A	rs2740491	G	A	A	Hoxc9_MA0485.1	4	1	+	9.27830716648327	10.446070880474853	GGTCGTAAATCTA
chr9	105079682	105079683	chr9:105079683:T:C	rs2937352	T	C	T	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	105199091	105199092	chr9:105199092:C:T	rs35958486	C	T	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	105259338	105259339	chr9:105259339:C:T	rs116225209	C	T	C	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr9	105307869	105307870	chr9:105307870:C:T	rs10991617	C	T	T	Hoxc9_MA0485.1	4	1	-	7.395578806801334	8.563342520792917	GGCAGTCAATCCC
chr9	105609229	105609230	chr9:105609230:T:G	rs117966412	T	G	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	106111715	106111716	chr9:106111716:C:T	rs1878368	C	T	T	Hoxc9_MA0485.1	1	1	-	6.964412562030993	5.40496898812093	GGCCTTCAATCAG
chr9	106321565	106321566	chr9:106321566:T:C	rs12555670	T	C	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr9	106324770	106324771	chr9:106324771:C:A	rs13295012	C	A	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	106420664	106420665	chr9:106420665:T:C	rs553965308	T	C	T	Hoxc9_MA0485.1	-12	0	-	0	0	.
chr9	106500784	106500785	chr9:106500785:G:C	rs4430147	G	C	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	106766607	106766608	chr9:106766608:C:T	rs10739228	C	T	C	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr9	106982926	106982927	chr9:106982927:A:G	rs7049113	A	G	a	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	107215028	107215029	chr9:107215029:C:T	rs116078703	C	T	C	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr9	107242653	107242654	chr9:107242654:T:C	rs7867706	T	C	T	Hoxc9_MA0485.1	11	1	+	8.318793922624042	7.123393452933984	GTTTATAAATCTC
chr9	107244091	107244092	chr9:107244092:T:C	rs116176820	T	C	T	Hoxc9_MA0485.1	9	1	+	11.611460741718673	4.723234927345041	TGCCATAAATCTC
chr9	107363870	107363871	chr9:107363871:A:G	rs112608778	A	G	A	Hoxc9_MA0485.1	8	1	+	9.022813800324203	2.120855290189244	ACTAATAAATCAG
chr9	107433915	107433916	chr9:107433916:C:T	rs12342660	C	T	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr9	107536648	107536649	chr9:107536649:A:G	rs55760189	A	G	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	107667826	107667827	chr9:107667827:G:A	rs7847530	G	A	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr9	107667834	107667835	chr9:107667835:A:T	rs58699609	A	T	A	Hoxc9_MA0485.1	23	0	+	0	0	.
chr9	107802008	107802009	chr9:107802009:T:G	rs75010580	T	G	T	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	107922513	107922514	chr9:107922514:T:C	rs41426847	T	C	C	Hoxc9_MA0485.1	9	1	+	8.843864678178806	1.9556388638051727	GCCCATAAATATC
chr9	107932273	107932274	chr9:107932274:T:C	rs10979111	T	C	T	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	107940272	107940273	chr9:107940273:G:A	rs6477606	G	A	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr9	108056939	108056940	chr9:108056940:T:C	rs75919311	T	C	T	Hoxc9_MA0485.1	0	1	-	8.168633978145918	8.701449111436919	ACTCATAAATCCT
chr9	108142456	108142457	chr9:108142457:C:T	rs559603	C	T	T	Hoxc9_MA0485.1	-2	0	+	0	0	.
chr9	108142457	108142458	chr9:108142458:T:C	rs76554122	T	C	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	108185105	108185106	chr9:108185106:T:G	rs59797529	T	G	T	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	108440611	108440612	chr9:108440612:G:C	rs1188238	G	C	C	Hoxc9_MA0485.1	1	1	+	7.691785176425884	6.552824695094213	GGCTATCAATCCG
chr9	108543551	108543552	chr9:108543552:A:T	rs116267088	A	T	A	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	108543552	108543553	chr9:108543553:C:T	rs150934254	C	T	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	108579916	108579917	chr9:108579917:G:T	rs10217224	G	T	T	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	108749389	108749390	chr9:108749390:G:A	rs2039810	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr9	108886451	108886452	chr9:108886452:A:G	rs10816758	A	G	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	109430671	109430672	chr9:109430672:T:A	chr9:109430672:T:A	T	A	T	Hoxc9_MA0485.1	-15	0	+	0	0	.
chr9	109497706	109497707	chr9:109497707:T:C	rs960759866	T	C	T	Hoxc9_MA0485.1	3	1	-	9.343716381027674	4.562071116612454	GCCAATAAATCCT
chr9	109538625	109538626	chr9:109538626:C:G	rs10816834	C	G	G	Hoxc9_MA0485.1	12	1	+	8.453227739500143	7.735171960585265	GAAAATAAATCTC
chr9	109689741	109689742	chr9:109689742:A:C	rs62581696	A	C	A	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	109800083	109800084	chr9:109800084:A:C	rs10816875	A	C	C	Hoxc9_MA0485.1	5	1	-	9.354533716721772	2.455990741002176	GCCCATCAATCTC
chr9	109800083	109800084	chr9:109800084:A:T	chr9:109800084:A:T	A	T	C	Hoxc9_MA0485.1	5	1	-	9.354533716721772	2.455990741002176	GCCCATCAATCTC
chr9	109800098	109800099	chr9:109800099:A:G	rs10816876	A	G	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	109844031	109844032	chr9:109844032:A:T	rs12235555	A	T	A	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	109967023	109967024	chr9:109967024:G:A	rs7869717	G	A	G	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	110157818	110157819	chr9:110157819:G:A	rs7023507	G	A	G	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr9	110278251	110278252	chr9:110278252:A:C	rs12347405	A	C	C	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	110371460	110371461	chr9:110371461:A:G	rs10816998	A	G	.	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	110371856	110371857	chr9:110371857:G:A	rs7035733	G	A	.	Hoxc9_MA0485.1	1	1	+	7.610160110119415	6.050716536209355	CGCAATGAATCTC
chr9	110434452	110434453	chr9:110434453:A:C	rs7852962	A	C	A	Hoxc9_MA0485.1	7	1	+	7.855960524280656	0.9517314550750771	GGCTTTAAATCTT
chr9	110532281	110532282	chr9:110532282:G:A	rs1931314	G	A	G	Hoxc9_MA0485.1	32	0	-	0	0	.
chr9	110533242	110533243	chr9:110533243:G:C	rs75616905	G	C	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	110649449	110649450	chr9:110649450:C:T	rs3001148	C	T	T	Hoxc9_MA0485.1	26	0	-	0	0	.
chr9	110660138	110660139	chr9:110660139:A:G	rs10980510	A	G	A	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	110731920	110731921	chr9:110731921:T:G	rs62574063	T	G	T	Hoxc9_MA0485.1	0	1	+	9.058905670681442	10.114270422347195	TGCTATAAATTAG
chr9	110784514	110784515	chr9:110784515:A:G	rs2821145	A	G	A	Hoxc9_MA0485.1	9	1	-	10.295650200759388	3.407424386385757	TGACATAAATCAT
chr9	110828167	110828168	chr9:110828168:G:A	rs2821134	G	A	A	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	110873100	110873101	chr9:110873101:T:C	rs505414	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr9	110912674	110912675	chr9:110912675:A:G	rs4246883	A	G	A	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	110912686	110912687	chr9:110912687:A:G	rs1326899	A	G	G	Hoxc9_MA0485.1	8	1	+	10.330174455784674	3.4282159456497148	AGCCATAAATTTC
chr9	111164049	111164050	chr9:111164050:C:T	rs76986915	C	T	C	Hoxc9_MA0485.1	-4	0	+	0	0	.
chr9	111247826	111247827	chr9:111247827:T:A	rs76949102	T	A	T	Hoxc9_MA0485.1	20	0	+	0	0	.
chr9	111386603	111386604	chr9:111386604:C:T	rs4978995	C	T	C	Hoxc9_MA0485.1	1	1	+	7.042553649414269	6.098753810169403	GCCCACAAATCTC
chr9	111613874	111613875	chr9:111613875:C:T	rs7024152	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr9	111637722	111637723	chr9:111637723:A:G	rs1885503	A	G	A	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	111877676	111877677	chr9:111877677:C:A	rs7038296	C	A	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	111926526	111926527	chr9:111926527:A:G	rs72757814	A	G	G	Hoxc9_MA0485.1	19	0	+	0	0	.
chr9	112059489	112059490	chr9:112059490:T:C	rs967605809	T	C	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	112193879	112193880	chr9:112193880:C:G	rs188965943	C	G	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr9	112200969	112200970	chr9:112200970:C:G	rs4978478	C	G	C	Hoxc9_MA0485.1	12	1	-	7.336823278316097	8.054879057230975	AGCAGTGAATCAG
chr9	112234046	112234047	chr9:112234047:A:C	rs10759538	A	C	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	112325269	112325270	chr9:112325270:T:A	rs73543900	T	A	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr9	112338789	112338790	chr9:112338790:C:T	rs150221343	C	T	C	Hoxc9_MA0485.1	12	1	+	9.069141205770404	8.815144252005851	AGCTATGAATCAC
chr9	112380764	112380765	chr9:112380765:C:T	chr9:112380765:C:T	C	T	C	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr9	112380776	112380777	chr9:112380777:A:G	rs572598989	A	G	A	Hoxc9_MA0485.1	7	1	+	7.535614524825638	0.631385455620059	TGCAGTCAATCTC
chr9	112433833	112433834	chr9:112433834:T:C	rs7038491	T	C	T	Hoxc9_MA0485.1	4	1	-	9.084922302718777	7.917158588727192	CACAATAAATCTC
chr9	112762978	112762979	chr9:112762979:C:T	rs10981499	C	T	C	Hoxc9_MA0485.1	3	1	+	7.40304242568869	6.5147896526660665	GGACGTGAATCAC
chr9	112774462	112774463	chr9:112774463:A:G	rs787285	A	G	G	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	112853473	112853474	chr9:112853474:A:G	rs1970528	A	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	112912805	112912806	chr9:112912806:G:A	rs10981545	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr9	113319809	113319810	chr9:113319810:C:G	rs186861010	C	G	C	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	113346814	113346815	chr9:113346815:T:C	rs4437724	T	C	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr9	113638655	113638656	chr9:113638656:G:T	rs4978549	G	T	G	Hoxc9_MA0485.1	15	0	+	0	0	.
chr9	113732300	113732301	chr9:113732301:A:G	rs139548198	A	G	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr9	113786149	113786150	chr9:113786150:A:C	rs10981925	A	C	A	Hoxc9_MA0485.1	11	1	+	9.485701774499221	7.432711919600141	GCCTGTAAATCAA
chr9	113959010	113959011	chr9:113959011:G:A	rs814685	G	A	G	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr9	113960547	113960548	chr9:113960548:A:G	rs2773396	A	G	G	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	113960552	113960553	chr9:113960553:A:C	rs2761688	A	C	C	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	114078899	114078900	chr9:114078900:C:T	rs2285055	C	T	T	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	114079461	114079462	chr9:114079462:C:A	rs2761691	C	A	C	Hoxc9_MA0485.1	17	0	-	0	0	.
chr9	114079470	114079471	chr9:114079471:T:C	rs10982058	T	C	T	Hoxc9_MA0485.1	8	1	-	7.988732022933082	1.086773512798122	TGCCATCAATCCT
chr9	114090827	114090828	chr9:114090828:T:C	rs28393131	T	C	T	Hoxc9_MA0485.1	0	1	+	8.716788581503398	8.484444923984029	TGCCATGAATCAG
chr9	114114855	114114856	chr9:114114856:T:C	rs4979339	T	C	t	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	114207834	114207835	chr9:114207835:G:A	rs10982100	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	114262234	114262235	chr9:114262235:G:A	rs2636856	G	A	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	114334639	114334640	chr9:114334640:G:A	rs10982167	G	A	g	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	114366806	114366807	chr9:114366807:G:A	rs2636902	G	A	G	Hoxc9_MA0485.1	2	1	-	7.714075693013403	6.337057215852179	GCCCATAAAACAA
chr9	114449691	114449692	chr9:114449692:G:C	rs10739413	G	C	G	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	114627197	114627198	chr9:114627198:C:G	rs1536737	C	G	C	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr9	114718793	114718794	chr9:114718794:C:T	rs189904169	C	T	C	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr9	114724873	114724874	chr9:114724874:T:C	rs10817670	T	C	T	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	114830119	114830120	chr9:114830120:C:T	rs181257369	C	T	C	Hoxc9_MA0485.1	-8	0	-	0	0	.
chr9	114992835	114992836	chr9:114992836:T:C	rs7861233	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	115063324	115063325	chr9:115063325:G:A	rs72758647	G	A	G	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	115107650	115107651	chr9:115107651:C:T	rs1250023	C	T	C	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	115126835	115126836	chr9:115126836:A:G	rs1411458	A	G	G	Hoxc9_MA0485.1	29	0	-	0	0	.
chr9	115135263	115135264	chr9:115135264:T:C	rs1537720	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	115141695	115141696	chr9:115141696:G:A	rs2012566	G	A	A	Hoxc9_MA0485.1	-5	0	+	0	0	.
chr9	115482202	115482203	chr9:115482203:T:C	rs139878828	T	C	T	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	115517371	115517372	chr9:115517372:C:T	rs72755374	C	T	C	Hoxc9_MA0485.1	-3	0	+	0	0	.
chr9	115653038	115653039	chr9:115653039:C:G	rs75295626	C	G	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	116328464	116328465	chr9:116328465:T:C	rs17301196	T	C	C	Hoxc9_MA0485.1	29	0	-	0	0	.
chr9	116437540	116437541	chr9:116437541:C:G	rs7018569	C	G	G	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	116550195	116550196	chr9:116550196:C:T	rs60209746	C	T	C	Hoxc9_MA0485.1	18	0	-	0	0	.
chr9	116979658	116979659	chr9:116979659:T:C	rs1001350	T	C	C	Hoxc9_MA0485.1	-4	0	-	0	0	.
chr9	117185319	117185320	chr9:117185320:C:T	rs6478288	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	117679667	117679668	chr9:117679668:C:T	rs1329057	C	T	T	Hoxc9_MA0485.1	1	1	+	8.580231931951559	7.636432092706694	GCACGTAAATCAG
chr9	117705297	117705298	chr9:117705298:C:T	rs10818073	C	T	C	Hoxc9_MA0485.1	27	0	-	0	0	.
chr9	117796732	117796733	chr9:117796733:T:C	rs10115586	T	C	T	Hoxc9_MA0485.1	-7	0	-	0	0	.
chr9	118559222	118559223	chr9:118559223:A:G	rs7036491	A	G	A	Hoxc9_MA0485.1	32	0	-	0	0	.
chr9	119533654	119533655	chr9:119533655:A:G	rs114362036	A	G	A	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	119818296	119818297	chr9:119818297:C:T	rs10984711	C	T	C	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	120568534	120568535	chr9:120568535:T:C	rs4837782	T	C	T	Hoxc9_MA0485.1	0	1	-	9.006324503163857	9.539139636454859	ATCAGTAAATCAC
chr9	120783879	120783880	chr9:120783880:T:C	rs80310902	T	C	T	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	120885636	120885637	chr9:120885637:G:T	rs10760121	G	T	T	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr9	121022069	121022070	chr9:121022070:T:G	rs10985129	T	G	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	121285899	121285900	chr9:121285900:C:G	rs552269641	C	G	C	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	121835887	121835888	chr9:121835888:C:T	rs10760191	C	T	C	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	122349049	122349050	chr9:122349050:G:A	rs7846826	G	A	A	Hoxc9_MA0485.1	1	1	+	6.8215938697674305	5.26215029585737	GGCCTTGAATCAC
chr9	122629129	122629130	chr9:122629130:A:G	rs1536928	A	G	A	Hoxc9_MA0485.1	-2	0	-	0	0	.
chr9	123108042	123108043	chr9:123108043:A:C	rs700084	A	C	C	Hoxc9_MA0485.1	24	0	-	0	0	.
chr9	123235342	123235343	chr9:123235343:T:C	rs79727258	T	C	T	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	123544010	123544011	chr9:123544011:A:C	rs12335550	A	C	A	Hoxc9_MA0485.1	-10	0	+	0	0	.
chr9	123753009	123753010	chr9:123753010:T:C	rs10818866	T	C	T	Hoxc9_MA0485.1	17	0	-	0	0	.
chr9	123796577	123796578	chr9:123796578:G:A	rs10986107	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	124038972	124038973	chr9:124038973:G:C	rs34495142	G	C	G	Hoxc9_MA0485.1	-3	0	-	0	0	.
chr9	124080507	124080508	chr9:124080508:G:C	rs10760315	G	C	C	Hoxc9_MA0485.1	22	0	+	0	0	.
chr9	124324722	124324723	chr9:124324723:G:A	rs944333	G	A	g	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	124828730	124828731	chr9:124828731:T:C	rs35832140	T	C	T	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	124914994	124914995	chr9:124914995:G:T	rs117730464	G	T	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	124937188	124937189	chr9:124937189:C:T	rs7872498	C	T	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	125431176	125431177	chr9:125431177:G:T	rs1250505	G	T	T	Hoxc9_MA0485.1	2	1	-	9.930015676948841	8.010612704545085	AGCTATCAATCAC
chr9	125647039	125647040	chr9:125647040:G:A	rs557972578	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	125744694	125744695	chr9:125744695:T:C	rs73667040	T	C	T	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	125744695	125744696	chr9:125744696:C:T	rs12236554	C	T	T	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	125748761	125748762	chr9:125748762:T:C	rs191129336	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	125887388	125887389	chr9:125887389:A:C	rs113122479	A	C	A	Hoxc9_MA0485.1	-13	0	-	0	0	.
chr9	125960949	125960950	chr9:125960950:G:A	rs111270350	G	A	G	Hoxc9_MA0485.1	25	0	-	0	0	.
chr9	125993699	125993700	chr9:125993700:T:C	rs4240495	T	C	T	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr9	126158190	126158191	chr9:126158191:C:T	rs4838353	C	T	C	Hoxc9_MA0485.1	3	1	+	7.932040879592421	7.043788106569797	AGCCGTGAATCTC
chr9	126222797	126222798	chr9:126222798:A:G	rs75241188	A	G	A	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	126317574	126317575	chr9:126317575:A:G	rs10987246	A	G	G	Hoxc9_MA0485.1	8	1	+	11.351014952425142	4.449056442290185	GGACATAAATCAT
chr9	126438806	126438807	chr9:126438807:C:A	rs10283538	C	A	c	Hoxc9_MA0485.1	26	0	+	0	0	.
chr9	126490794	126490795	chr9:126490795:G:A	rs10819171	G	A	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	126598506	126598507	chr9:126598507:G:A	rs72760776	G	A	G	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	126607119	126607120	chr9:126607120:A:C	rs62578123	A	C	A	Hoxc9_MA0485.1	3	1	+	8.887564081539203	9.622315289109673	GCAAATAAATCAA
chr9	126671249	126671250	chr9:126671250:T:C	rs4837103	T	C	T	Hoxc9_MA0485.1	5	1	+	9.48597111191445	5.0006597492759655	GGTCATAAATTTC
chr9	126694250	126694251	chr9:126694251:G:A	rs28510333	G	A	A	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	126763651	126763652	chr9:126763652:C:G	rs115977816	C	G	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	127000317	127000318	chr9:127000318:T:C	rs11789307	T	C	T	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	127092493	127092494	chr9:127092494:C:T	rs2789511	C	T	T	Hoxc9_MA0485.1	4	1	-	6.788193213742329	7.955956927733914	GGCCGTAACTCAG
chr9	127265872	127265873	chr9:127265873:G:A	rs191559717	G	A	G	Hoxc9_MA0485.1	0	1	-	8.433031453103379	8.665375110622746	CGCTATAAATTTT
chr9	127379073	127379074	chr9:127379074:G:A	rs62579679	G	A	G	Hoxc9_MA0485.1	20	0	-	0	0	.
chr9	127628818	127628819	chr9:127628819:G:C	rs10987707	G	C	G	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	127658533	127658534	chr9:127658534:G:T	rs2287116	G	T	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	127701368	127701369	chr9:127701369:T:C	rs1078404	T	C	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	127802216	127802217	chr9:127802217:G:T	rs36204705	G	T	G	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	128090922	128090923	chr9:128090923:T:A	rs10819353	T	A	A	Hoxc9_MA0485.1	26	0	-	0	0	.
chr9	128099565	128099566	chr9:128099566:G:T	chr9:128099566:G:T	G	T	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	128140904	128140905	chr9:128140905:A:C	rs61125043	A	C	A	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	128193009	128193010	chr9:128193010:G:A	rs7853638	G	A	G	Hoxc9_MA0485.1	-18	0	+	0	0	.
chr9	128193026	128193027	chr9:128193027:C:T	rs7853429	C	T	T	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	128193058	128193059	chr9:128193059:G:T	rs535963241	G	T	G	Hoxc9_MA0485.1	31	0	+	0	0	.
chr9	128193059	128193060	chr9:128193060:C:T	rs555654101	C	T	C	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	128881556	128881557	chr9:128881557:C:G	rs7020013	C	G	G	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	129413566	129413567	chr9:129413567:G:C	rs557554700	G	C	G	Hoxc9_MA0485.1	28	0	+	0	0	.
chr9	129460250	129460251	chr9:129460251:T:C	rs73632105	T	C	C	Hoxc9_MA0485.1	28	0	-	0	0	.
chr9	129509715	129509716	chr9:129509716:A:G	rs76343491	A	G	A	Hoxc9_MA0485.1	21	0	-	0	0	.
chr9	129703527	129703528	chr9:129703528:T:G	rs4836668	T	G	G	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	129740780	129740781	chr9:129740781:G:A	rs73670200	G	A	G	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	129811256	129811257	chr9:129811257:G:T	rs12634	G	T	T	Hoxc9_MA0485.1	0	1	+	8.53001817302513	7.474653421359378	GGCAATAAATATG
chr9	130086846	130086847	chr9:130086847:C:T	rs2159640	C	T	C	Hoxc9_MA0485.1	4	1	-	9.25550222774213	10.423265941733714	CACCGTAAATCAT
chr9	130276219	130276220	chr9:130276220:C:G	rs145995858	C	G	c	Hoxc9_MA0485.1	32	0	+	0	0	.
chr9	130323237	130323238	chr9:130323238:C:T	rs993861173	C	T	c	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	130479192	130479193	chr9:130479193:C:G	rs1220844824	C	G	C	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	130738689	130738690	chr9:130738690:T:C	rs2583844	T	C	T	Hoxc9_MA0485.1	11	1	-	8.55026748377105	4.137734084902682	GTCCATCAATCAG
chr9	130809001	130809002	chr9:130809002:G:A	rs1042104708	G	A	G	Hoxc9_MA0485.1	-20	0	-	0	0	.
chr9	131227537	131227538	chr9:131227538:C:A	rs117434342	C	A	c	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr9	131227538	131227539	chr9:131227539:G:A	rs116912327	G	A	G	Hoxc9_MA0485.1	-13	0	+	0	0	.
chr9	131490903	131490904	chr9:131490904:C:T	rs76851644	C	T	C	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	131656882	131656883	chr9:131656883:A:C	rs183443584	A	C	A	Hoxc9_MA0485.1	-12	0	+	0	0	.
chr9	131656943	131656944	chr9:131656944:A:G	rs11794161	A	G	A	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr9	131656961	131656962	chr9:131656962:T:A	rs58115269	T	A	T	Hoxc9_MA0485.1	9	1	+	12.27354396638757	8.445901397887544	AGCCATAAATCAG
chr9	132156251	132156252	chr9:132156252:G:A	rs142726530	G	A	G	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	132259966	132259967	chr9:132259967:T:C	rs17146655	T	C	T	Hoxc9_MA0485.1	-7	0	+	0	0	.
chr9	132458153	132458154	chr9:132458154:G:C	rs11999263	G	C	C	Hoxc9_MA0485.1	-17	0	+	0	0	.
chr9	132458191	132458192	chr9:132458192:G:C	rs4962066	G	C	G	Hoxc9_MA0485.1	21	0	+	0	0	.
chr9	132510062	132510063	chr9:132510063:C:A	rs17149211	C	A	C	Hoxc9_MA0485.1	-14	0	-	0	0	.
chr9	132807641	132807642	chr9:132807642:T:A	rs117329152	T	A	T	Hoxc9_MA0485.1	22	0	-	0	0	.
chr9	133227558	133227559	chr9:133227559:A:G	rs7390294	A	G	A	Hoxc9_MA0485.1	5	1	-	8.960474667513623	4.475163304875137	GGCAGTAAATTTC
chr9	133375037	133375038	chr9:133375038:G:C	rs995282472	G	C	G	Hoxc9_MA0485.1	-8	0	+	0	0	.
chr9	133375072	133375073	chr9:133375073:C:G	rs28455779	C	G	C	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	133725246	133725247	chr9:133725247:T:C	rs2510234	T	C	T	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	133725255	133725256	chr9:133725256:T:C	rs2510235	T	C	T	Hoxc9_MA0485.1	-19	0	-	0	0	.
chr9	133907608	133907609	chr9:133907609:T:C	rs79064869	T	C	C	Hoxc9_MA0485.1	23	0	-	0	0	.
chr9	133907628	133907629	chr9:133907629:G:A	rs75332534	G	A	A	Hoxc9_MA0485.1	3	1	-	10.723598779102034	9.83534600607941	GTCCATAAATCAG
chr9	133907655	133907656	chr9:133907656:C:T	rs116010192	C	T	C	Hoxc9_MA0485.1	-16	0	+	0	0	.
chr9	133907684	133907685	chr9:133907685:T:C	rs143467693	T	C	T	Hoxc9_MA0485.1	13	0	+	0	0	.
chr9	133907695	133907696	chr9:133907696:C:T	rs113519243	C	T	C	Hoxc9_MA0485.1	24	0	+	0	0	.
chr9	133907696	133907697	chr9:133907697:G:A	rs147977414	G	A	G	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	134011617	134011618	chr9:134011618:G:C	rs2810478	G	C	g	Hoxc9_MA0485.1	-18	0	-	0	0	.
chr9	134068957	134068958	chr9:134068958:T:G	rs1243422917	T	G	T	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	134197615	134197616	chr9:134197616:A:G	rs935932367	A	G	a	Hoxc9_MA0485.1	-17	0	-	0	0	.
chr9	134276699	134276700	chr9:134276700:T:G	rs192335968	T	G	T	Hoxc9_MA0485.1	13	0	-	0	0	.
chr9	134351831	134351832	chr9:134351832:G:A	rs545816202	G	A	G	Hoxc9_MA0485.1	15	0	-	0	0	.
chr9	134373292	134373293	chr9:134373293:C:T	rs187609887	C	T	C	Hoxc9_MA0485.1	21	0	-	0	0	.
chr9	134552049	134552050	chr9:134552050:G:A	rs3132304	G	A	G	Hoxc9_MA0485.1	-6	0	+	0	0	.
chr9	134602683	134602684	chr9:134602684:G:A	rs746663281	G	A	G	Hoxc9_MA0485.1	14	0	-	0	0	.
chr9	134697236	134697237	chr9:134697237:C:T	rs12379870	C	T	c	Hoxc9_MA0485.1	-20	0	+	0	0	.
chr9	134812211	134812212	chr9:134812212:T:A	rs10745387	T	A	A	Hoxc9_MA0485.1	-19	0	+	0	0	.
chr9	134812235	134812236	chr9:134812236:T:C	rs13293801	T	C	T	Hoxc9_MA0485.1	5	1	+	8.812681596801314	4.327370234162829	TGTCGTAAATCTT
chr9	134831009	134831010	chr9:134831010:C:T	rs9410000	C	T	C	Hoxc9_MA0485.1	-10	0	-	0	0	.
chr9	134877559	134877560	chr9:134877560:T:C	rs7025696	T	C	T	Hoxc9_MA0485.1	2	1	+	8.331927342995398	9.708945820156622	TGTAGTAAATCTC
chr9	134921200	134921201	chr9:134921201:C:T	rs3124957	C	T	C	Hoxc9_MA0485.1	19	0	-	0	0	.
chr9	134943093	134943094	chr9:134943094:C:T	rs137923070	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	134990554	134990555	chr9:134990555:G:C	rs7035877	G	C	A	Hoxc9_MA0485.1	-16	0	-	0	0	.
chr9	135296108	135296109	chr9:135296109:C:T	rs7852791	C	T	T	Hoxc9_MA0485.1	-9	0	+	0	0	.
chr9	135522510	135522511	chr9:135522511:A:T	rs75682638	A	T	A	Hoxc9_MA0485.1	3	1	+	8.960474667513623	8.806973102061468	GGCAGTAAATTTC
chr9	135581780	135581781	chr9:135581781:T:C	rs10858126	T	C	-	Hoxc9_MA0485.1	27	0	+	0	0	.
chr9	135899243	135899244	chr9:135899244:A:C	rs115302329	A	C	A	Hoxc9_MA0485.1	-14	0	+	0	0	.
chr9	135899274	135899275	chr9:135899275:C:T	rs147297610	C	T	C	Hoxc9_MA0485.1	17	0	+	0	0	.
chr9	135903975	135903976	chr9:135903976:G:A	rs137892784	G	A	G	Hoxc9_MA0485.1	4	1	+	7.590096209102927	8.757859923094513	CAACGTAAATCAC
chr9	135997729	135997730	chr9:135997730:A:G	rs10776862	A	G	G	Hoxc9_MA0485.1	30	0	-	0	0	.
chr9	136109194	136109195	chr9:136109195:A:G	rs61155038	A	G	A	Hoxc9_MA0485.1	25	0	+	0	0	.
chr9	136156605	136156606	chr9:136156606:C:T	rs11792632	C	T	C	Hoxc9_MA0485.1	-11	0	+	0	0	.
chr9	136156645	136156646	chr9:136156646:C:T	rs7027441	C	T	C	Hoxc9_MA0485.1	29	0	+	0	0	.
chr9	136160987	136160988	chr9:136160988:G:A	rs147959543	G	A	G	Hoxc9_MA0485.1	-5	0	-	0	0	.
chr9	136177514	136177515	chr9:136177515:T:C	rs10776889	T	C	C	Hoxc9_MA0485.1	12	1	+	8.252291428899412	8.506288382663964	AGCCACAAATCAT
chr9	136526806	136526807	chr9:136526807:C:T	rs11574864	C	T	C	Hoxc9_MA0485.1	14	0	+	0	0	.
chr9	136526810	136526811	chr9:136526811:G:A	rs973486506	G	A	G	Hoxc9_MA0485.1	18	0	+	0	0	.
chr9	136546870	136546871	chr9:136546871:T:C	rs2990583	T	C	C	Hoxc9_MA0485.1	32	0	-	0	0	.
chr9	136565915	136565916	chr9:136565916:T:C	rs973859044	T	C	T	Hoxc9_MA0485.1	4	1	-	11.07609269183147	9.908328977839886	TCCCATAAATCAT
chr9	136629019	136629020	chr9:136629020:C:T	rs4880108	C	T	C	Hoxc9_MA0485.1	-1	0	+	0	0	.
chr9	137241177	137241178	chr9:137241178:G:A	rs541966855	G	A	G	Hoxc9_MA0485.1	-1	0	-	0	0	.
chr9	137730620	137730621	chr9:137730621:G:T	rs10867057	G	T	G	Hoxc9_MA0485.1	2	1	-	7.7519991608017	5.832596188397942	GTCCGTAAATTAG
chr9	137942898	137942899	chr9:137942899:T:A	rs12347880	T	A	T	Hoxc9_MA0485.1	5	1	+	9.9530711684348	3.0545281927152024	TCTCATAAATCAC
chr9	138020971	138020972	chr9:138020972:G:A	rs7033916	G	A	G	Hoxc9_MA0485.1	-11	0	-	0	0	.