chr1	186892	186893	chr1:186893:T:A	rs1389886531	T	A	.	Alx1.mouse_homeodomain_1	4	1	-	8.981982082767747	3.9072135360298423	CCTAATTAAA
chr1	1039513	1039514	chr1:1039514:C:T	rs3121578	C	T	c	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	1161910	1161911	chr1:1161911:C:A	rs61768478	C	A	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	1640474	1640475	chr1:1640475:C:G	rs72468213	C	G	c	Alx1.mouse_homeodomain_1	8	1	+	7.662075066399709	8.16388906539059	CCTAATTACG
chr1	1843380	1843381	chr1:1843381:A:T	rs10907191	A	T	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	2284469	2284470	chr1:2284470:A:C	rs2643913	A	C	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	2988138	2988139	chr1:2988139:G:C	rs34083170	G	C	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	2991102	2991103	chr1:2991103:T:C	rs12411019	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	3017546	3017547	chr1:3017547:G:A	rs1041259771	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	3313979	3313980	chr1:3313980:T:C	rs16824089	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	3752188	3752189	chr1:3752189:A:C	rs12128253	A	C	A	Alx1.mouse_homeodomain_1	2	1	-	8.74067261241241	5.741175057917405	TTTAATTAGC
chr1	3787739	3787740	chr1:3787740:G:A	rs1050958785	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	3846797	3846798	chr1:3846798:A:G	rs540795368	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	3848046	3848047	chr1:3848047:T:C	rs55873991	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	4174022	4174023	chr1:4174023:C:T	rs567836913	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	4268891	4268892	chr1:4268892:G:A	rs16838501	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	4402843	4402844	chr1:4402844:C:T	rs12046579	C	T	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	4481191	4481192	chr1:4481192:C:T	rs76642104	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	4550999	4551000	chr1:4551000:T:C	rs241246	T	C	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	4734011	4734012	chr1:4734012:C:T	rs61765040	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	4734046	4734047	chr1:4734047:G:A	rs566729985	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	4847642	4847643	chr1:4847643:T:C	rs11582327	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	5099289	5099290	chr1:5099290:T:C	rs982156	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	5130105	5130106	chr1:5130106:A:G	rs12083573	A	G	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	5336324	5336325	chr1:5336325:G:A	rs34392666	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	5455958	5455959	chr1:5455959:T:A	chr1:5455959:T:A	T	A	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	5565505	5565506	chr1:5565506:T:C	rs6673119	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	5734286	5734287	chr1:5734287:G:A	rs2649060	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	6019569	6019570	chr1:6019570:G:C	rs7539366	G	C	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	6739031	6739032	chr1:6739032:G:T	rs11122126	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	7151279	7151280	chr1:7151280:T:G	rs9434482	T	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	7151288	7151289	chr1:7151289:C:T	rs114390851	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	7159720	7159721	chr1:7159721:T:A	rs12094021	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	7334667	7334668	chr1:7334668:C:T	rs12041403	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr1	7662385	7662386	chr1:7662386:A:T	rs4908670	A	T	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr1	7858374	7858375	chr1:7858375:G:A	rs61773396	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	7869801	7869802	chr1:7869802:T:C	rs12757238	T	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	7909248	7909249	chr1:7909249:T:G	rs4908721	T	G	G	Alx1.mouse_homeodomain_1	8	1	-	8.874801250211958	8.23885861342153	TTTAATTAAC
chr1	7964531	7964532	chr1:7964532:T:C	rs4908488	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	8835483	8835484	chr1:8835484:G:A	rs6699790	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	8875089	8875090	chr1:8875090:A:G	rs2038904	A	G	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	8914569	8914570	chr1:8914570:A:G	rs74050935	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	9187259	9187260	chr1:9187260:C:A	rs4141449	C	A	a	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	9346919	9346920	chr1:9346920:T:C	rs2075972	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	9400906	9400907	chr1:9400907:G:T	rs11121403	G	T	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	9466666	9466667	chr1:9466667:G:A	rs6695721	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	9606708	9606709	chr1:9606709:C:T	chr1:9606709:C:T	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	10318392	10318393	chr1:10318393:C:G	rs6703602	C	G	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	10640390	10640391	chr1:10640391:T:C	rs2128416	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr1	10960800	10960801	chr1:10960801:G:A	rs180870595	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	11075192	11075193	chr1:11075193:C:T	rs72870086	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr1	11797467	11797468	chr1:11797468:A:T	rs6541005	A	T	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	11797468	11797469	chr1:11797469:A:T	rs6541006	A	T	a	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	12380923	12380924	chr1:12380924:T:A	rs17037994	T	A	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	12599031	12599032	chr1:12599032:C:T	rs150526729	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	12599048	12599049	chr1:12599049:G:A	rs55636637	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	12714684	12714685	chr1:12714685:G:A	rs79206989	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	13233731	13233732	chr1:13233732:G:T	rs28733911	G	T	-	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	13478739	13478740	chr1:13478740:A:C	rs79040918	A	C	A	Alx1.mouse_homeodomain_1	0	1	-	7.846603954486855	6.508687643805312	TGTAATTAGC
chr1	13820139	13820140	chr1:13820140:C:T	rs76561972	C	T	c	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	14085213	14085214	chr1:14085214:G:A	rs12138583	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.346039445977318	8.91565877229958	CCTAATTACA
chr1	14443362	14443363	chr1:14443363:A:G	rs79182486	A	G	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	14539869	14539870	chr1:14539870:G:C	rs3933358	G	C	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	14725930	14725931	chr1:14725931:G:A	rs115192966	G	A	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	14755768	14755769	chr1:14755769:A:T	rs529844191	A	T	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	14776766	14776767	chr1:14776767:C:T	rs10927546	C	T	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	15522555	15522556	chr1:15522556:T:A	rs933705	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	15531422	15531423	chr1:15531423:C:T	rs16851727	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	16081491	16081492	chr1:16081492:G:T	rs28553367	G	T	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	16081535	16081536	chr1:16081536:C:T	rs28420337	C	T	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	16276437	16276438	chr1:16276438:C:T	rs4661733	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	16331477	16331478	chr1:16331478:G:A	rs72637832	G	A	g	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	16605704	16605705	chr1:16605705:C:G	rs1254519192	C	G	.	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	16606648	16606649	chr1:16606649:A:G	rs12047150	A	G	.	Alx1.mouse_homeodomain_1	5	1	-	8.981982082767747	3.994260166498766	CCTAATTAAA
chr1	16606660	16606661	chr1:16606661:C:A	rs1765590	C	A	.	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	16713111	16713112	chr1:16713112:C:A	rs1736699	C	A	.	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	16721732	16721733	chr1:16721733:A:G	rs9662076	A	G	.	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	16870310	16870311	chr1:16870311:C:G	rs7366554	C	G	c	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	17212637	17212638	chr1:17212638:C:T	rs79007379	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	18059014	18059015	chr1:18059015:G:A	rs75996651	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	18554255	18554256	chr1:18554256:G:A	rs59713898	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	18651970	18651971	chr1:18651971:C:T	rs918231318	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	18651987	18651988	chr1:18651988:T:C	rs1339062	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	18772784	18772785	chr1:18772785:G:A	rs72650381	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.735131894130908	8.589161921660155	CCCAATTAGC
chr1	18807765	18807766	chr1:18807766:A:G	rs7411058	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	19028483	19028484	chr1:19028484:A:G	rs145985894	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	19411695	19411696	chr1:19411696:C:T	rs4244002	C	T	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	19423141	19423142	chr1:19423142:C:T	rs6682099	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	19607282	19607283	chr1:19607283:A:G	rs2745224	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	19927813	19927814	chr1:19927814:G:A	rs7520018	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	19929105	19929106	chr1:19929106:G:A	rs1093731	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	21022706	21022707	chr1:21022707:T:C	rs115878571	T	C	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	21410005	21410006	chr1:21410006:A:G	chr1:21410006:A:G	A	G	a	Alx1.mouse_homeodomain_1	5	1	-	8.23885861342153	3.2511366971525475	TTTAATTACC
chr1	21586338	21586339	chr1:21586339:G:A	rs12023600	G	A	g	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	21779074	21779075	chr1:21779075:C:T	rs6664248	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	22327464	22327465	chr1:22327465:C:T	rs1223187205	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	22331140	22331141	chr1:22331141:T:C	rs140942977	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	22331185	22331186	chr1:22331186:A:G	rs78252507	A	G	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	23179315	23179316	chr1:23179316:G:C	rs78621241	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	8.589161921660155	8.16388906539059	CCTAATTAGC
chr1	23179317	23179318	chr1:23179318:T:C	rs182298153	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.589161921660155	2.6622579345000914	CCTAATTAGC
chr1	23366928	23366929	chr1:23366929:T:C	rs2849025	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	23525294	23525295	chr1:23525295:G:A	rs3218148	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	23963774	23963775	chr1:23963775:A:G	rs35008260	A	G	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	24568049	24568050	chr1:24568050:A:C	rs1003574916	A	C	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	24771753	24771754	chr1:24771754:T:C	rs9332415	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	25033796	25033797	chr1:25033797:T:C	rs74060689	T	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	25145593	25145594	chr1:25145594:T:G	chr1:25145594:T:G	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	9.133492773520002	2.844513538817043	TTTAATTAAA
chr1	25436410	25436411	chr1:25436411:A:T	rs6699896	A	T	A	Alx1.mouse_homeodomain_1	2	1	-	8.346039445977318	6.253195542668079	CCTAATTACA
chr1	26024980	26024981	chr1:26024981:C:T	rs11582191	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	26061749	26061750	chr1:26061750:C:G	rs2997446	C	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	26469759	26469760	chr1:26469760:C:T	rs2494394	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	28058979	28058980	chr1:28058980:A:T	rs112455633	A	T	A	Alx1.mouse_homeodomain_1	8	1	+	9.133492773520002	8.152635841529076	TTTAATTAAA
chr1	28648868	28648869	chr1:28648869:C:T	rs186147276	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.589161921660155	8.17105328609015	CCTAATTAGC
chr1	28648884	28648885	chr1:28648885:T:C	chr1:28648885:T:C	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	28648887	28648888	chr1:28648888:A:G	rs144062355	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr1	28648888	28648889	chr1:28648889:G:T	rs9426296	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr1	28648890	28648891	chr1:28648891:C:T	rs533805301	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	29368589	29368590	chr1:29368590:C:T	rs6692485	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	29410799	29410800	chr1:29410800:C:T	rs183429411	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	29524795	29524796	chr1:29524796:C:G	rs4256781	C	G	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	29708422	29708423	chr1:29708423:G:A	rs11589959	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.723290559459702	9.292909885781963	CCTAATTAAC
chr1	29766814	29766815	chr1:29766815:C:T	rs111601295	C	T	.	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	29806453	29806454	chr1:29806454:A:T	rs10914476	A	T	-	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	29835131	29835132	chr1:29835132:C:T	rs1979088	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	29956095	29956096	chr1:29956096:A:T	rs2015244	A	T	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	29962012	29962013	chr1:29962013:A:G	rs115632475	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	30050221	30050222	chr1:30050222:T:A	rs17341662	T	A	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	30086283	30086284	chr1:30086284:A:G	chr1:30086284:A:G	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.656967248991535	6.0501473591428425	TCTAATTACC
chr1	30086297	30086298	chr1:30086298:C:A	rs547015620	C	A	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	30108719	30108720	chr1:30108720:A:G	rs2376907	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	30163196	30163197	chr1:30163197:T:C	rs12093074	T	C	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	30163204	30163205	chr1:30163205:A:G	rs12091728	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	30300787	30300788	chr1:30300788:T:C	rs116419771	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	7.802937221462287	2.8152153051933064	TCCAATTACC
chr1	30300808	30300809	chr1:30300809:G:C	rs2377271	G	C	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	30368773	30368774	chr1:30368774:A:G	rs75878100	A	G	.	Alx1.mouse_homeodomain_1	0	1	-	8.74067261241241	8.17105328609015	TTTAATTAGC
chr1	30690542	30690543	chr1:30690543:T:G	rs147118889	T	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	31529819	31529820	chr1:31529820:C:T	rs1320583	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	32112084	32112085	chr1:32112085:G:T	rs1033178302	G	T	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	32200887	32200888	chr1:32200888:G:T	rs114234120	G	T	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	33285780	33285781	chr1:33285781:G:T	rs66878579	G	T	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	33874865	33874866	chr1:33874866:A:G	rs10799000	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	34786681	34786682	chr1:34786682:A:G	rs659619	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.23169439272197	7.377664365192722	TCTAATTACG
chr1	34786695	34786696	chr1:34786696:G:A	rs141391084	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	34882823	34882824	chr1:34882824:G:T	rs6669523	G	T	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	34882824	34882825	chr1:34882825:C:T	rs6694493	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	35010341	35010342	chr1:35010342:C:G	rs9919282	C	G	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	35996168	35996169	chr1:35996169:T:G	rs183295751	T	G	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	36441465	36441466	chr1:36441466:C:T	rs57328962	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.74067261241241	8.004057009958101	TTTAATTAGC
chr1	36865301	36865302	chr1:36865302:T:G	chr1:36865302:T:G	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.23885861342153	4.960412730161428	TTTAATTACC
chr1	37465315	37465316	chr1:37465316:T:C	rs2783725	T	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	37466150	37466151	chr1:37466151:T:C	rs2245873	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	38093679	38093680	chr1:38093680:A:G	rs1108182	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	38417592	38417593	chr1:38417593:A:T	rs6666802	A	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	38580131	38580132	chr1:38580132:C:G	rs189572973	C	G	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	38929742	38929743	chr1:38929743:T:C	rs554408751	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	38986461	38986462	chr1:38986462:T:G	rs77966371	T	G	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	39047709	39047710	chr1:39047710:C:G	rs12407823	C	G	c	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	39142703	39142704	chr1:39142704:T:A	rs533247	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	39186091	39186092	chr1:39186092:A:C	rs145981577	A	C	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	39540230	39540231	chr1:39540231:G:A	rs72663521	G	A	g	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	40584381	40584382	chr1:40584382:G:A	rs11806098	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	40766860	40766861	chr1:40766861:G:A	chr1:40766861:G:A	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	40884510	40884511	chr1:40884511:C:T	rs10889705	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	40915808	40915809	chr1:40915809:C:T	rs77119127	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	40985763	40985764	chr1:40985764:T:C	rs4430318	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr1	42177853	42177854	chr1:42177854:T:C	rs11554182	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	42177863	42177864	chr1:42177864:A:G	rs78061258	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	42222259	42222260	chr1:42222260:C:T	rs555119417	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	42753320	42753321	chr1:42753321:G:A	rs149585714	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	44774828	44774829	chr1:44774829:G:T	rs113464644	G	T	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	44774838	44774839	chr1:44774839:A:C	rs115422235	A	C	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	44774841	44774842	chr1:44774842:A:T	rs184576907	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	45586638	45586639	chr1:45586639:A:G	rs550225465	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	46182989	46182990	chr1:46182990:T:A	rs922411641	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	46248260	46248261	chr1:46248261:C:G	rs114579733	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	46248293	46248294	chr1:46248294:A:G	rs17102080	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr1	46396659	46396660	chr1:46396660:C:G	rs6703374	C	G	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	46538294	46538295	chr1:46538295:C:T	rs58174810	C	T	t	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr1	46619191	46619192	chr1:46619192:A:G	rs11211329	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.570744477099081	7.886780097521472	TCTAATTATA
chr1	47195127	47195128	chr1:47195128:C:A	rs148406765	C	A	c	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	47195148	47195149	chr1:47195149:T:C	rs12089424	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr1	47247958	47247959	chr1:47247959:T:C	rs12756634	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	47434224	47434225	chr1:47434225:T:C	rs3814005	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	47901798	47901799	chr1:47901799:C:T	rs12739172	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	47972108	47972109	chr1:47972109:T:C	rs10888592	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	48098913	48098914	chr1:48098914:A:G	rs527084	A	G	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	48499597	48499598	chr1:48499598:A:G	rs12024734	A	G	G	Alx1.mouse_homeodomain_1	0	1	-	8.570744477099081	8.00112515077682	TCTAATTATA
chr1	48499811	48499812	chr1:48499812:T:C	rs12021583	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	48818347	48818348	chr1:48818348:C:A	rs11205548	C	A	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	50208886	50208887	chr1:50208887:A:G	rs11576734	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.69757138156076	6.09075149171207	TCCAATTAAA
chr1	51237347	51237348	chr1:51237348:T:G	rs192813810	T	G	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	51237355	51237356	chr1:51237356:C:T	rs142603077	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	51237357	51237358	chr1:51237358:G:A	rs112322864	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	51513004	51513005	chr1:51513005:A:T	rs573098187	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	52590390	52590391	chr1:52590391:A:G	rs34275176	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	52604437	52604438	chr1:52604438:C:T	rs776659003	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	52779799	52779800	chr1:52779800:A:T	rs9661082	A	T	t	Alx1.mouse_homeodomain_1	5	1	-	8.312052953791037	2.8880711565746804	TCTAATTATC
chr1	53237901	53237902	chr1:53237902:A:G	rs114000572	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	53546229	53546230	chr1:53546230:A:G	rs540126	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	53755042	53755043	chr1:53755043:G:T	rs115509218	G	T	G	Alx1.mouse_homeodomain_1	2	1	-	7.49200941844807	6.253195542668079	CCCAATTACA
chr1	53767868	53767869	chr1:53767869:A:G	rs41311158	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	54231069	54231070	chr1:54231070:A:G	rs4061073	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	54303107	54303108	chr1:54303108:G:C	rs17392881	G	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr1	54589646	54589647	chr1:54589647:G:A	rs1655539	G	A	g	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	55033190	55033191	chr1:55033191:T:A	rs2495489	T	A	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	55351833	55351834	chr1:55351834:T:C	rs6683645	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	55375951	55375952	chr1:55375952:C:T	rs116111403	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr1	55419046	55419047	chr1:55419047:T:C	rs6588558	T	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr1	55685103	55685104	chr1:55685104:T:C	rs2671227	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	7.309859037861343	2.3221371215923616	CCCAATTAGG
chr1	55824258	55824259	chr1:55824259:T:A	rs4558016	T	A	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	55833921	55833922	chr1:55833922:G:A	rs12040991	G	A	g	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	55833921	55833922	chr1:55833922:G:T	chr1:55833922:G:T	G	T	g	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	55883694	55883695	chr1:55883695:G:A	rs74072547	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	7.920351646537226	TCTAATTACC
chr1	56646548	56646549	chr1:56646549:T:G	rs1124900	T	G	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	56713252	56713253	chr1:56713253:T:G	rs3738567	T	G	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	56883790	56883791	chr1:56883791:T:C	rs6697228	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.061628744770331	7.377664365192722	TCCAATTACA
chr1	57444570	57444571	chr1:57444571:T:C	rs35089045	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	57861439	57861440	chr1:57861440:G:A	rs763789817	G	A	.	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	57984356	57984357	chr1:57984357:A:C	rs2764673	A	C	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	58318180	58318181	chr1:58318181:C:G	rs7546303	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	58456744	58456745	chr1:58456745:A:G	rs706461	A	G	G	Alx1.mouse_homeodomain_1	8	1	+	8.01360700198315	7.879478364183603	TCCAATTAAG
chr1	58699369	58699370	chr1:58699370:A:C	rs11207296	A	C	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	58783294	58783295	chr1:58783295:A:C	rs555165165	A	C	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	58893048	58893049	chr1:58893049:G:C	rs80226064	G	C	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	59509697	59509698	chr1:59509698:A:G	rs649419	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	8.570744477099081	5.673649967762705	TCTAATTATA
chr1	59715216	59715217	chr1:59715217:A:G	rs535637038	A	G	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	59947439	59947440	chr1:59947440:G:C	rs144936625	G	C	G	Alx1.mouse_homeodomain_1	2	1	-	8.438879858252715	6.293412331286958	TCCAATTAAC
chr1	60678938	60678939	chr1:60678939:C:T	rs1381167	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	60678969	60678970	chr1:60678970:T:C	rs1381166	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	60970288	60970289	chr1:60970289:G:C	rs558944870	G	C	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr1	61017914	61017915	chr1:61017915:A:G	rs34244502	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	61116873	61116874	chr1:61116874:T:G	rs6693597	T	G	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	61556901	61556902	chr1:61556902:C:G	rs549989032	C	G	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	62024355	62024356	chr1:62024356:C:T	rs6695442	C	T	-	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	62089946	62089947	chr1:62089947:A:C	rs4255414	A	C	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	62296091	62296092	chr1:62296092:G:T	rs2765269	G	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	62584147	62584148	chr1:62584148:G:A	rs12042319	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	62926993	62926994	chr1:62926994:G:A	rs11208061	G	A	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	63011944	63011945	chr1:63011945:C:T	rs12092686	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	63410695	63410696	chr1:63410696:T:G	rs6664140	T	G	G	Alx1.mouse_homeodomain_1	0	1	+	8.867637029512398	7.529720718830856	TCTAATTAAG
chr1	63859879	63859880	chr1:63859880:T:C	rs636119	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	8.723290559459702	3.7516109064389607	CCTAATTAAC
chr1	64077864	64077865	chr1:64077865:A:G	rs1260763	A	G	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	64228217	64228218	chr1:64228218:G:A	rs17126246	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	64662387	64662388	chr1:64662388:T:C	rs7517300	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	64923410	64923411	chr1:64923411:C:T	rs17397653	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	65151765	65151766	chr1:65151766:T:A	rs10889523	T	A	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	66140187	66140188	chr1:66140188:T:A	rs115796825	T	A	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	66143470	66143471	chr1:66143471:G:A	rs2503174	G	A	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	66490467	66490468	chr1:66490468:G:T	rs17471738	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	66537192	66537193	chr1:66537193:G:A	rs4655494	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	66557375	66557376	chr1:66557376:G:A	rs55830106	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.438879858252715	7.702264255798406	TCCAATTAAC
chr1	66634625	66634626	chr1:66634626:T:C	rs6696812	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	66855132	66855133	chr1:66855133:A:G	rs1104705	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.087347922669274	5.480528032820583	CCTAATTACC
chr1	67042230	67042231	chr1:67042231:C:G	rs7539628	C	G	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	67604955	67604956	chr1:67604956:T:C	rs115857346	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	9.158781247982416	3.2318772608223525	TCTAATTAGC
chr1	67837774	67837775	chr1:67837775:C:G	rs10889716	C	G	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr1	68168957	68168958	chr1:68168958:C:T	rs1367446	C	T	c	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	68168958	68168959	chr1:68168959:G:A	rs12132335	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	68438829	68438830	chr1:68438830:A:G	rs12138573	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	69498345	69498346	chr1:69498346:G:T	rs10749791	G	T	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	69527555	69527556	chr1:69527556:G:A	rs4471216	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	70686995	70686996	chr1:70686996:G:A	rs2820522	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	70687029	70687030	chr1:70687030:G:A	rs1335000	G	A	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	70908652	70908653	chr1:70908653:A:T	rs942979	A	T	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	71031897	71031898	chr1:71031898:G:A	rs2817862	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	71206435	71206436	chr1:71206436:G:A	rs17485917	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	71239420	71239421	chr1:71239421:A:T	rs2694955	A	T	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	71905990	71905991	chr1:71905991:A:C	rs72931784	A	C	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	72064182	72064183	chr1:72064183:T:C	rs12131816	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	72197892	72197893	chr1:72197893:C:T	rs12141242	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	72375517	72375518	chr1:72375518:G:A	rs79547900	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	72432301	72432302	chr1:72432302:C:A	rs1445582	C	A	C	Alx1.mouse_homeodomain_1	9	1	+	7.886642584883163	8.145334108191209	TTCAATTAGC
chr1	73619491	73619492	chr1:73619492:A:C	rs11210309	A	C	a	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	74056847	74056848	chr1:74056848:G:A	rs1072936	G	A	g	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	74284081	74284082	chr1:74284082:T:A	rs1412823	T	A	-	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	74505274	74505275	chr1:74505275:G:A	rs190542882	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	74541035	74541036	chr1:74541036:T:C	rs7514705	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr1	75723759	75723760	chr1:75723760:T:C	rs1251079	T	C	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	75764546	75764547	chr1:75764547:C:A	rs12136754	C	A	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	76319707	76319708	chr1:76319708:C:T	rs4421636	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	76730873	76730874	chr1:76730874:C:T	rs505606	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.981982082767747	9.551601409090008	CCTAATTAAA
chr1	76827263	76827264	chr1:76827264:A:G	rs11162219	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	77218889	77218890	chr1:77218890:C:T	rs529438932	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	77399454	77399455	chr1:77399455:G:A	rs6663047	G	A	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	77840097	77840098	chr1:77840098:T:G	rs6604878	T	G	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	77977969	77977970	chr1:77977970:T:C	rs78194791	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	78004711	78004712	chr1:78004712:T:C	rs563198389	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr1	78038726	78038727	chr1:78038727:T:G	rs6702939	T	G	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	78047091	78047092	chr1:78047092:T:G	rs6424664	T	G	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	78465074	78465075	chr1:78465075:T:A	rs75850034	T	A	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	78560986	78560987	chr1:78560987:C:A	rs11162507	C	A	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	78832023	78832024	chr1:78832024:A:C	rs78515663	A	C	A	Alx1.mouse_homeodomain_1	9	1	+	9.551601409090008	9.292909885781963	TCTAATTAAA
chr1	79018153	79018154	chr1:79018154:A:C	rs4650633	A	C	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	79354920	79354921	chr1:79354921:A:G	rs2989850	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	79587609	79587610	chr1:79587610:G:C	rs11162746	G	C	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	79743966	79743967	chr1:79743967:A:T	rs1916847	A	T	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	80042484	80042485	chr1:80042485:A:T	rs61774283	A	T	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	80762972	80762973	chr1:80762973:T:C	rs78670355	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	81073646	81073647	chr1:81073647:A:G	rs1377570909	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	81185457	81185458	chr1:81185458:A:T	rs6696323	A	T	T	Alx1.mouse_homeodomain_1	0	1	-	8.422165645528107	7.204367785295047	TCTAATTAGT
chr1	81386001	81386002	chr1:81386002:T:C	rs12404189	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	81429411	81429412	chr1:81429412:A:G	rs11163291	A	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr1	81478385	81478386	chr1:81478386:A:G	rs111620896	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	82322283	82322284	chr1:82322284:T:G	chr1:82322284:T:G	T	G	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	82573134	82573135	chr1:82573135:C:T	rs9660164	C	T	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	82845360	82845361	chr1:82845361:C:A	rs1249222712	C	A	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	83101817	83101818	chr1:83101818:A:G	rs12405566	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	83830372	83830373	chr1:83830373:T:C	rs910180	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	83830376	83830377	chr1:83830377:A:C	rs910181	A	C	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	83978367	83978368	chr1:83978368:T:C	rs11163879	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	84223824	84223825	chr1:84223825:T:G	rs638545	T	G	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	84387458	84387459	chr1:84387459:G:T	rs12044734	G	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	84558578	84558579	chr1:84558579:C:T	rs111231943	C	T	-	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	84573075	84573076	chr1:84573076:A:G	rs2911591	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	84573077	84573078	chr1:84573078:G:C	rs185123896	G	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	85224503	85224504	chr1:85224504:C:A	rs1498380	C	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	85244231	85244232	chr1:85244232:C:T	rs7531640	C	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	85407553	85407554	chr1:85407554:C:T	rs12133722	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	85491284	85491285	chr1:85491285:G:A	rs562724613	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	86054295	86054296	chr1:86054296:T:C	rs12750946	T	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	86409515	86409516	chr1:86409516:T:C	rs80173692	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	86749670	86749671	chr1:86749671:C:G	rs12097397	C	G	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	86988720	86988721	chr1:86988721:A:C	rs185771938	A	C	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	87004945	87004946	chr1:87004946:A:G	rs10493794	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	87129292	87129293	chr1:87129293:T:A	rs114492063	T	A	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	87240261	87240262	chr1:87240262:C:T	rs4623672	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	87358293	87358294	chr1:87358294:G:A	rs72728020	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	87367759	87367760	chr1:87367760:G:A	rs11161991	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	87436627	87436628	chr1:87436628:G:A	rs11162017	G	A	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	87560771	87560772	chr1:87560772:A:G	rs901953779	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	87717034	87717035	chr1:87717035:A:G	rs10493801	A	G	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	87772014	87772015	chr1:87772015:C:A	rs35913405	C	A	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	88328146	88328147	chr1:88328147:T:C	rs78901449	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	89433459	89433460	chr1:89433460:G:A	rs11577456	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	89762481	89762482	chr1:89762482:C:T	rs1458457367	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	89762483	89762484	chr1:89762484:A:C	rs1275526467	A	C	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	89762817	89762818	chr1:89762818:C:A	rs576879	C	A	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	89762825	89762826	chr1:89762826:G:A	chr1:89762826:G:A	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	89883787	89883788	chr1:89883788:C:T	rs17498135	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	89976523	89976524	chr1:89976524:C:G	chr1:89976524:C:G	C	G	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	90135258	90135259	chr1:90135259:T:C	rs7520257	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	90383981	90383982	chr1:90383982:C:T	rs4658158	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	90717322	90717323	chr1:90717323:G:T	rs78829010	G	T	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr1	90730239	90730240	chr1:90730240:C:T	chr1:90730240:C:T	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	90797556	90797557	chr1:90797557:A:G	chr1:90797557:A:G	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.061628744770331	5.454808854921641	TCCAATTACA
chr1	91130636	91130637	chr1:91130637:G:T	rs240513	G	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	91263588	91263589	chr1:91263589:A:T	rs4658206	A	T	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	91585248	91585249	chr1:91585249:G:A	rs11165010	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	91712701	91712702	chr1:91712702:C:T	rs1750641	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	91927716	91927717	chr1:91927717:G:A	rs9943039	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	91927734	91927735	chr1:91927735:T:A	rs9943130	T	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	92152765	92152766	chr1:92152766:G:C	rs519623	G	C	C	Alx1.mouse_homeodomain_1	8	1	-	8.346039445977318	8.8478534449682	CCTAATTACA
chr1	93022278	93022279	chr1:93022279:C:T	rs79242631	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	93022281	93022282	chr1:93022282:G:C	rs55689191	G	C	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	93080185	93080186	chr1:93080186:T:C	rs184423305	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	93252188	93252189	chr1:93252189:T:C	rs797681	T	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr1	93347872	93347873	chr1:93347873:T:C	rs771464	T	C	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	93504433	93504434	chr1:93504434:T:C	rs4847429	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	93575072	93575073	chr1:93575073:C:T	rs67511232	C	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	93605856	93605857	chr1:93605857:T:A	rs146646626	T	A	T	Alx1.mouse_homeodomain_1	9	1	-	8.061628744770331	7.066321619007978	TCCAATTACA
chr1	93852046	93852047	chr1:93852047:A:T	rs11165021	A	T	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	94077213	94077214	chr1:94077214:G:T	rs3120133	G	T	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	94236683	94236684	chr1:94236684:T:A	rs11165099	T	A	-	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	94335875	94335876	chr1:94335876:C:T	rs550238711	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	94624063	94624064	chr1:94624064:G:C	rs3814015	G	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	94755243	94755244	chr1:94755244:T:A	rs72956422	T	A	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	94773198	94773199	chr1:94773199:T:C	rs11577484	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	94792798	94792799	chr1:94792799:T:G	rs7522002	T	G	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	94793442	94793443	chr1:94793443:T:G	rs77539685	T	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	95582412	95582413	chr1:95582413:A:G	rs923246857	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	96206682	96206683	chr1:96206683:G:T	rs183764022	G	T	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	96349949	96349950	chr1:96349950:C:A	rs13374632	C	A	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	96349951	96349952	chr1:96349952:C:T	rs13374633	C	T	T	Alx1.mouse_homeodomain_1	1	1	+	8.298017703190137	7.879909067620131	CCTAATTAAG
chr1	97680543	97680544	chr1:97680544:C:G	rs75294762	C	G	G	Alx1.mouse_homeodomain_1	8	1	+	8.061628744770331	8.563442743761213	TCCAATTACA
chr1	98826428	98826429	chr1:98826429:G:A	rs12732963	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	98915381	98915382	chr1:98915382:G:A	rs144801578	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	99170629	99170630	chr1:99170630:T:C	rs670374	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	99180913	99180914	chr1:99180914:G:A	rs17393937	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	99636990	99636991	chr1:99636991:C:G	rs834964	C	G	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	99647790	99647791	chr1:99647791:T:C	rs760489544	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr1	99663226	99663227	chr1:99663227:A:G	rs834982	A	G	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	99672705	99672706	chr1:99672706:C:T	rs146220292	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	99672717	99672718	chr1:99672718:A:T	rs111886163	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	8.69757138156076	3.2735895843444056	TCCAATTAAA
chr1	99672733	99672734	chr1:99672734:C:T	rs116751148	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	99739260	99739261	chr1:99739261:C:A	rs4626908	C	A	c	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	100465516	100465517	chr1:100465517:A:C	rs3754131	A	C	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	100529270	100529271	chr1:100529271:C:G	chr1:100529271:C:G	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	101253990	101253991	chr1:101253991:C:G	rs549053008	C	G	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	101253995	101253996	chr1:101253996:T:C	rs75551063	T	C	T	Alx1.mouse_homeodomain_1	1	1	+	7.886642584883163	8.304751220453168	TTCAATTAGC
chr1	101316171	101316172	chr1:101316172:C:T	rs12024453	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	101323774	101323775	chr1:101323775:G:A	rs151126694	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.723290559459702	9.292909885781963	CCTAATTAAC
chr1	101375605	101375606	chr1:101375606:C:T	rs150007385	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	101733556	101733557	chr1:101733557:G:T	rs74825997	G	T	G	Alx1.mouse_homeodomain_1	8	1	-	8.23885861342153	8.874801250211958	TTTAATTACC
chr1	101929541	101929542	chr1:101929542:A:G	rs7513512	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr1	102353092	102353093	chr1:102353093:A:T	rs1417237	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	102353093	102353094	chr1:102353094:C:A	rs1417236	C	A	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	102882903	102882904	chr1:102882904:A:T	rs3753844	A	T	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	103111888	103111889	chr1:103111889:A:G	rs77424549	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	103125908	103125909	chr1:103125909:G:A	rs12026245	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	103157162	103157163	chr1:103157163:T:C	rs7518542	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	8.061628744770331	3.073906828501351	TCCAATTACA
chr1	103191380	103191381	chr1:103191381:A:G	rs12074606	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	103333459	103333460	chr1:103333460:C:G	rs1052475450	C	G	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr1	105633149	105633150	chr1:105633150:A:T	rs530679898	A	T	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	105962587	105962588	chr1:105962588:A:G	rs115226702	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	107143795	107143796	chr1:107143796:T:C	rs4481881	T	C	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	107247256	107247257	chr1:107247257:T:C	rs76866557	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.17105328609015	7.317023258560902	CTTAATTAGC
chr1	107262918	107262919	chr1:107262919:T:G	rs3125686	T	G	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	108107110	108107111	chr1:108107111:T:C	rs9988549	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.305181923889696	8.17105328609015	CTTAATTAAC
chr1	108140982	108140983	chr1:108140983:T:C	rs10881506	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.981982082767747	3.994260166498766	CCTAATTAAA
chr1	108583881	108583882	chr1:108583882:T:C	rs2804259	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	108746143	108746144	chr1:108746144:G:A	rs1759487	G	A	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	108862253	108862254	chr1:108862254:T:C	rs35050241	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	109530544	109530545	chr1:109530545:C:T	rs115442904	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	109637607	109637608	chr1:109637608:A:G	rs58126698	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	109688446	109688447	chr1:109688447:G:A	rs111471552	G	A	.	Alx1.mouse_homeodomain_1	0	1	-	7.993823417438953	8.563442743761213	CCCAATTAGA
chr1	109712866	109712867	chr1:109712867:C:A	rs111611566	C	A	.	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	109726205	109726206	chr1:109726206:A:C	rs4970774	A	C	C	Alx1.mouse_homeodomain_1	2	1	-	7.9549935751004215	4.955496020605415	GCTAATTAAC
chr1	109735326	109735327	chr1:109735327:T:C	rs1109138	T	C	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	110131077	110131078	chr1:110131078:G:A	rs12408727	G	A	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr1	110198726	110198727	chr1:110198727:G:T	rs2603580	G	T	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	110241596	110241597	chr1:110241597:G:A	rs814324	G	A	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	110749380	110749381	chr1:110749381:A:C	rs343787	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.8478534449682	4.717440751037738	CCTAATTAGA
chr1	111507266	111507267	chr1:111507267:T:A	rs74112306	T	A	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	7.040648870210764	TTTAATTAAA
chr1	111625143	111625144	chr1:111625144:A:G	rs2364816	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	111820139	111820140	chr1:111820140:G:T	rs639570	G	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	111947209	111947210	chr1:111947210:C:T	rs9429614	C	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	112431776	112431777	chr1:112431777:T:G	rs2483349	T	G	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	112927619	112927620	chr1:112927620:T:C	rs76760679	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	112937263	112937264	chr1:112937264:T:A	rs2149036	T	A	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	113321808	113321809	chr1:113321809:G:A	rs10494154	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	113905766	113905767	chr1:113905767:C:T	rs11552449	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	114997104	114997105	chr1:114997105:A:G	rs58658580	A	G	a	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	115173474	115173475	chr1:115173475:A:C	rs1286213	A	C	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	115233147	115233148	chr1:115233148:T:C	rs1294379	T	C	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	115549418	115549419	chr1:115549419:A:T	rs948621	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	115741003	115741004	chr1:115741004:A:G	rs7551613	A	G	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	116416069	116416070	chr1:116416070:G:T	rs80233258	G	T	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	116874902	116874903	chr1:116874903:A:C	rs35460124	A	C	A	Alx1.mouse_homeodomain_1	0	1	-	8.74067261241241	7.402756301730869	TTTAATTAGC
chr1	116927689	116927690	chr1:116927690:T:C	rs2247145	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	116953113	116953114	chr1:116953114:G:A	rs191338000	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	117069675	117069676	chr1:117069676:A:C	rs10754334	A	C	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	117069707	117069708	chr1:117069708:G:A	rs2057593	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	117117508	117117509	chr1:117117509:A:G	rs755592	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	117216149	117216150	chr1:117216150:G:A	rs6662387	G	A	g	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	117237904	117237905	chr1:117237905:T:C	rs147644689	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	117270864	117270865	chr1:117270865:G:T	rs12079298	G	T	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	117284949	117284950	chr1:117284950:T:G	rs12133420	T	G	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	118305093	118305094	chr1:118305094:G:A	rs12402476	G	A	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	118958149	118958150	chr1:118958150:G:A	rs985036	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	119033063	119033064	chr1:119033064:C:T	rs139467678	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	119280186	119280187	chr1:119280187:G:A	chr1:119280187:G:A	G	A	A	Alx1.mouse_homeodomain_1	0	1	+	7.8208649373008745	7.940983387749356	GCTAATTAGC
chr1	119280201	119280202	chr1:119280202:A:C	chr1:119280202:A:C	A	C	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	119739608	119739609	chr1:119739609:T:C	rs17024167	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	119774122	119774123	chr1:119774123:G:A	rs753425	G	A	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	120182519	120182520	chr1:120182520:G:T	rs1320926711	G	T	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	120342041	120342042	chr1:120342042:A:G	rs1384702354	A	G	g	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr1	121459000	121459001	chr1:121459001:G:A	rs145368283	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	146038136	146038137	chr1:146038137:T:A	rs10158896	T	A	.	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	146038179	146038180	chr1:146038180:C:G	rs372200144	C	G	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	146939510	146939511	chr1:146939511:G:C	rs71219963	G	C	.	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	147516185	147516186	chr1:147516186:T:A	rs146074958	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	147642007	147642008	chr1:147642008:T:C	rs145567162	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	147642045	147642046	chr1:147642046:T:C	rs781836371	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr1	147777772	147777773	chr1:147777773:C:T	rs10900398	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	148334749	148334750	chr1:148334750:C:G	rs2999607	C	G	.	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	148334750	148334751	chr1:148334751:C:G	rs587751853	C	G	.	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	148334755	148334756	chr1:148334756:C:T	rs537191	C	T	.	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	148334769	148334770	chr1:148334770:G:A	rs1385034731	G	A	.	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	148334772	148334773	chr1:148334773:C:T	rs80113239	C	T	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	148334773	148334774	chr1:148334774:A:C	rs782266858	A	C	.	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	150564619	150564620	chr1:150564620:A:G	rs376086503	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	150564621	150564622	chr1:150564622:T:A	rs149617135	T	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	150574388	150574389	chr1:150574389:A:T	rs6587756	A	T	.	Alx1.mouse_homeodomain_1	7	1	+	9.417472771290461	6.699477749083205	TCTAATTAGA
chr1	150628807	150628808	chr1:150628808:A:G	rs587757890	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	150931882	150931883	chr1:150931883:T:C	rs75952620	T	C	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	151194419	151194420	chr1:151194420:G:T	rs10888406	G	T	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	151790665	151790666	chr1:151790666:G:A	chr1:151790666:G:A	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	152347438	152347439	chr1:152347439:T:G	rs3120669	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.304751220453168	3.489618827569232	TCCAATTAGC
chr1	152869823	152869824	chr1:152869824:G:A	rs2339396	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	8.312052953791037	7.575437351336728	TCTAATTATC
chr1	152902881	152902882	chr1:152902882:C:G	rs58290373	C	G	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	152973960	152973961	chr1:152973961:C:T	rs10494287	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	154162080	154162081	chr1:154162081:A:C	rs3196889	A	C	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	154744674	154744675	chr1:154744675:A:G	rs11577391	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	154780724	154780725	chr1:154780725:A:C	rs10752608	A	C	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	154780729	154780730	chr1:154780730:A:G	rs12130204	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	154932702	154932703	chr1:154932703:A:G	rs7543051	A	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	155456066	155456067	chr1:155456067:C:T	rs72704176	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	156369790	156369791	chr1:156369791:T:C	rs74609238	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	156588012	156588013	chr1:156588013:T:G	rs115081393	T	G	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	156588014	156588015	chr1:156588015:G:T	rs35091159	G	T	g	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	157278290	157278291	chr1:157278291:G:T	rs72702670	G	T	N	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	157279685	157279686	chr1:157279686:G:A	rs1832480	G	A	g	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	158121127	158121128	chr1:158121128:C:A	rs77307808	C	A	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	158819206	158819207	chr1:158819207:G:T	rs857791	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	7.735131894130908	7.993823417438953	CCCAATTAGC
chr1	158875088	158875089	chr1:158875089:G:C	rs2852713	G	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	159142032	159142033	chr1:159142033:C:A	rs3026926	C	A	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	159516849	159516850	chr1:159516850:T:C	rs11265218	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	159898859	159898860	chr1:159898860:T:A	rs60378648	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	7.49200941844807	2.0680276212317152	CCCAATTACA
chr1	160167547	160167548	chr1:160167548:G:A	rs12063738	G	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	160395219	160395220	chr1:160395220:C:T	rs34830574	C	T	t	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	160450245	160450246	chr1:160450246:C:T	rs11585691	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	161002430	161002431	chr1:161002431:T:C	rs2483145	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	161068188	161068189	chr1:161068189:C:A	rs12118313	C	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	161116068	161116069	chr1:161116069:C:A	rs4656986	C	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	161116070	161116071	chr1:161116071:A:T	rs4656987	A	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	161533222	161533223	chr1:161533223:A:G	rs140970775	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	161642875	161642876	chr1:161642876:A:C	rs60751059	A	C	a	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	161745585	161745586	chr1:161745586:T:C	rs6427624	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	162137791	162137792	chr1:162137792:A:G	rs74125923	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	163063354	163063355	chr1:163063355:C:T	rs186452777	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	163171700	163171701	chr1:163171701:C:T	rs12041294	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	163172746	163172747	chr1:163172747:G:A	rs10917691	G	A	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	163332998	163332999	chr1:163332999:T:C	rs2136243	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	163999343	163999344	chr1:163999344:C:G	rs260912	C	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	164563075	164563076	chr1:164563076:C:T	rs116798897	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	164750823	164750824	chr1:164750824:A:G	rs10918063	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	165235556	165235557	chr1:165235557:C:T	rs75912260	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	165235715	165235716	chr1:165235716:G:A	rs572948863	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	165288896	165288897	chr1:165288897:G:C	rs146061153	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	165353495	165353496	chr1:165353496:A:G	rs71628377	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	165633249	165633250	chr1:165633250:C:T	rs6692264	C	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr1	165697401	165697402	chr1:165697402:C:A	rs192499429	C	A	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	166933802	166933803	chr1:166933803:A:C	rs926265	A	C	C	Alx1.mouse_homeodomain_1	7	1	+	8.312052953791037	5.033607070530936	TCTAATTATC
chr1	167187262	167187263	chr1:167187263:T:C	rs9803659	T	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	167360225	167360226	chr1:167360226:A:G	rs117595623	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	167371379	167371380	chr1:167371380:C:T	rs75895426	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.23885861342153	7.50224301096722	TTTAATTACC
chr1	167464794	167464795	chr1:167464795:A:C	rs78330333	A	C	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr1	167642132	167642133	chr1:167642133:A:C	rs4656547	A	C	C	Alx1.mouse_homeodomain_1	4	1	+	8.438879858252715	2.9771132075315614	TCCAATTAAC
chr1	167957964	167957965	chr1:167957965:C:T	rs77066357	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr1	168081666	168081667	chr1:168081667:G:A	rs78281555	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	168362950	168362951	chr1:168362951:T:A	rs12409703	T	A	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	168362960	168362961	chr1:168362961:T:C	rs182158262	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	168506791	168506792	chr1:168506792:A:C	rs12095242	A	C	A	Alx1.mouse_homeodomain_1	0	1	-	8.91565877229958	7.577742461618037	TCTAATTACA
chr1	168601290	168601291	chr1:168601291:G:T	rs6674502	G	T	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	168706956	168706957	chr1:168706957:C:T	rs531953	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	168792936	168792937	chr1:168792937:C:T	rs2066895	C	T	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	169004396	169004397	chr1:169004397:T:C	rs12042517	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr1	169004438	169004439	chr1:169004439:A:C	rs77834252	A	C	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	169062294	169062295	chr1:169062295:A:G	rs576376202	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	169112170	169112171	chr1:169112171:T:C	rs1200139	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	169124437	169124438	chr1:169124438:C:T	rs7540067	C	T	T	Alx1.mouse_homeodomain_1	9	1	-	7.662075066399709	8.346039445977318	CCTAATTACG
chr1	169201444	169201445	chr1:169201445:T:G	rs4656660	T	G	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	169298352	169298353	chr1:169298353:C:T	rs12031371	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	169529595	169529596	chr1:169529596:T:C	rs6009	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	169529596	169529597	chr1:169529597:G:A	rs6008	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	169596154	169596155	chr1:169596155:C:A	rs3917811	C	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	169740174	169740175	chr1:169740175:G:A	rs79323892	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	170033215	170033216	chr1:170033216:T:C	rs77861373	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	170591462	170591463	chr1:170591463:A:G	rs6658866	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	170634668	170634669	chr1:170634669:A:G	rs4656792	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	171116746	171116747	chr1:171116747:A:G	rs999033642	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	7.940983387749356	5.334163497900666	ACTAATTAGC
chr1	171344851	171344852	chr1:171344852:T:A	rs2235509	T	A	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	171358943	171358944	chr1:171358944:T:C	rs6425194	T	C	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	171470603	171470604	chr1:171470604:A:G	rs10913090	A	G	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	171800970	171800971	chr1:171800971:G:C	rs7522582	G	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	171913461	171913462	chr1:171913462:T:G	rs6425481	T	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	172254851	172254852	chr1:172254852:T:A	rs1992551	T	A	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr1	172466710	172466711	chr1:172466711:T:C	rs9425329	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	172534965	172534966	chr1:172534966:T:A	rs12729948	T	A	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	172561546	172561547	chr1:172561547:T:C	rs10911920	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	172903692	172903693	chr1:172903693:T:C	chr1:172903693:T:C	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr1	173016090	173016091	chr1:173016091:T:C	rs1883478	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.91565877229958	8.061628744770331	TCTAATTACA
chr1	173425106	173425107	chr1:173425107:T:C	rs4462186	T	C	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	173429752	173429753	chr1:173429753:T:C	rs79998187	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	174052081	174052082	chr1:174052082:G:C	rs556313176	G	C	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	174258458	174258459	chr1:174258459:T:C	rs60141888	T	C	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	174743119	174743120	chr1:174743120:A:G	rs757605831	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	174815513	174815514	chr1:174815514:A:G	rs72717617	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	174871761	174871762	chr1:174871762:A:T	rs1883139	A	T	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	175553584	175553585	chr1:175553585:G:A	rs143849441	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	175718383	175718384	chr1:175718384:C:T	rs10913064	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr1	175718399	175718400	chr1:175718400:A:G	rs16849040	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.422165645528107	3.434443729259125	TCTAATTAGT
chr1	176657074	176657075	chr1:176657075:T:C	rs144317242	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.44398767566089	2.472308022640148	CCCAATTAAG
chr1	176897457	176897458	chr1:176897458:A:T	rs6425399	A	T	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr1	176902500	176902501	chr1:176902501:G:T	rs6664879	G	T	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	177040283	177040284	chr1:177040284:G:A	rs10913289	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	177863925	177863926	chr1:177863926:T:C	rs12119996	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	178921649	178921650	chr1:178921650:A:G	rs7366	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	179315287	179315288	chr1:179315288:A:T	rs4446926	A	T	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	179760507	179760508	chr1:179760508:A:G	rs2454200	A	G	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	180066227	180066228	chr1:180066228:G:A	rs9425856	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	180180328	180180329	chr1:180180329:G:C	rs12080055	G	C	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	180631587	180631588	chr1:180631588:C:T	rs4651074	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr1	180852205	180852206	chr1:180852206:T:G	rs72707411	T	G	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	180898126	180898127	chr1:180898127:A:G	rs764667666	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	181392813	181392814	chr1:181392814:G:C	rs114798990	G	C	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	181812248	181812249	chr1:181812249:C:T	rs482500	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	182174798	182174799	chr1:182174799:T:G	rs1779799	T	G	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	182292562	182292563	chr1:182292563:A:T	rs4543750	A	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	182407093	182407094	chr1:182407094:C:A	rs12748778	C	A	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	182654143	182654144	chr1:182654144:T:A	rs10489965	T	A	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	183020230	183020231	chr1:183020231:C:T	rs10797813	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	183135727	183135728	chr1:183135728:T:A	rs2022392	T	A	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	183218868	183218869	chr1:183218869:A:T	rs3814338	A	T	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	183272583	183272584	chr1:183272584:G:T	rs4652789	G	T	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr1	183272591	183272592	chr1:183272592:C:A	rs114877381	C	A	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	183329366	183329367	chr1:183329367:T:C	rs10797875	T	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	183368797	183368798	chr1:183368798:A:G	rs542349	A	G	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	183480765	183480766	chr1:183480766:A:G	rs2702176	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.91565877229958	6.308838882450887	TCTAATTACA
chr1	183646005	183646006	chr1:183646006:A:G	rs776627305	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	183784794	183784795	chr1:183784795:A:T	rs7519596	A	T	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	183901934	183901935	chr1:183901935:T:G	rs116961367	T	G	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	184473061	184473062	chr1:184473062:T:C	rs2207527	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr1	184611108	184611109	chr1:184611109:A:T	rs555347059	A	T	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	184611115	184611116	chr1:184611116:C:T	rs4651223	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	184768864	184768865	chr1:184768865:A:G	rs861586	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	185097687	185097688	chr1:185097688:C:T	rs75429623	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	185377318	185377319	chr1:185377319:A:C	rs11802271	A	C	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	185552364	185552365	chr1:185552365:C:A	rs7515674	C	A	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	185567505	185567506	chr1:185567506:C:A	rs112521404	C	A	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	186152118	186152119	chr1:186152119:G:A	rs11809665	G	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	186770517	186770518	chr1:186770518:C:T	rs1158042	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	187121451	187121452	chr1:187121452:A:G	rs230612	A	G	g	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	187477345	187477346	chr1:187477346:T:C	rs80142991	T	C	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	187787895	187787896	chr1:187787896:T:C	rs6664686	T	C	C	Alx1.mouse_homeodomain_1	2	1	+	8.981982082767747	8.1279520552385	CCTAATTAAA
chr1	187883577	187883578	chr1:187883578:A:G	rs16827680	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	188325280	188325281	chr1:188325281:A:T	rs28392477	A	T	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	188651771	188651772	chr1:188651772:C:T	rs10912463	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr1	188651810	188651811	chr1:188651811:T:C	rs7413517	T	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	189292873	189292874	chr1:189292874:T:C	rs10921678	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.438879858252715	3.4511579419837353	TCCAATTAAC
chr1	189312588	189312589	chr1:189312589:G:T	rs951601	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	189852037	189852038	chr1:189852038:A:G	rs150868073	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	189852113	189852114	chr1:189852114:C:T	rs3005689	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	190188905	190188906	chr1:190188906:G:C	rs1093087	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	190303845	190303846	chr1:190303846:G:A	rs10920691	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	190307429	190307430	chr1:190307430:G:A	rs147479639	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	190353457	190353458	chr1:190353458:T:C	rs185860283	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	9.133492773520002	4.145770857251021	TTTAATTAAA
chr1	191662759	191662760	chr1:191662760:T:A	rs61818813	T	A	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	191825326	191825327	chr1:191825327:T:C	rs72729226	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr1	191825332	191825333	chr1:191825333:T:C	rs6681142	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	192628741	192628742	chr1:192628742:C:A	rs6698245	C	A	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	192657725	192657726	chr1:192657726:A:C	rs2296021	A	C	A	Alx1.mouse_homeodomain_1	9	1	-	8.422165645528107	8.733508391712851	TCTAATTAGT
chr1	193322410	193322411	chr1:193322411:C:A	rs506671	C	A	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	193458968	193458969	chr1:193458969:C:T	rs1243058938	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	193568913	193568914	chr1:193568914:T:C	rs16835542	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	194144815	194144816	chr1:194144816:A:C	rs561948720	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.298017703190137	4.167605009259675	CCTAATTAAG
chr1	195107814	195107815	chr1:195107815:T:C	rs12748075	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	195107815	195107816	chr1:195107816:G:T	rs12723151	G	T	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	196008509	196008510	chr1:196008510:C:T	rs10922008	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	196488244	196488245	chr1:196488245:C:A	rs72732257	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.17105328609015	7.522874752179351	CTTAATTAGC
chr1	196558141	196558142	chr1:196558142:A:T	rs6664020	A	T	T	Alx1.mouse_homeodomain_1	9	1	-	8.422165645528107	9.417472771290461	TCTAATTAGT
chr1	197200664	197200665	chr1:197200665:C:G	rs11801772	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	197277837	197277838	chr1:197277838:C:A	rs3790380	C	A	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	197787302	197787303	chr1:197787303:C:T	rs1747821	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	197873013	197873014	chr1:197873014:T:C	rs12069217	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	197915497	197915498	chr1:197915498:T:C	rs115253532	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	198121274	198121275	chr1:198121275:C:T	rs72749439	C	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	198496550	198496551	chr1:198496551:G:T	rs76812037	G	T	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	198496556	198496557	chr1:198496557:G:A	rs75211462	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	199307708	199307709	chr1:199307709:C:T	rs4915353	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	200330908	200330909	chr1:200330909:C:A	rs10919897	C	A	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	200514150	200514151	chr1:200514151:T:C	rs76118949	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	201679274	201679275	chr1:201679275:C:T	rs755153581	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	201897825	201897826	chr1:201897826:C:T	rs1008906271	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	201963962	201963963	chr1:201963963:A:T	rs6694080	A	T	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	202651240	202651241	chr1:202651241:T:C	rs12047572	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	202766085	202766086	chr1:202766086:C:T	rs12121706	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	202890639	202890640	chr1:202890640:A:G	rs7531745	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	203143354	203143355	chr1:203143355:C:T	rs10158980	C	T	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	203158995	203158996	chr1:203158996:A:G	rs11809836	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	203803967	203803968	chr1:203803968:A:C	rs7518201	A	C	C	Alx1.mouse_homeodomain_1	6	1	-	7.993823417438953	3.1786910245550155	CCCAATTAGA
chr1	204446647	204446648	chr1:204446648:C:T	rs144789599	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	204715108	204715109	chr1:204715109:T:C	rs3738158	T	C	C	Alx1.mouse_homeodomain_1	8	1	+	8.312052953791037	8.656967248991535	TCTAATTATC
chr1	204926087	204926088	chr1:204926088:G:A	rs2802851	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	204982411	204982412	chr1:204982412:A:G	rs6677763	A	G	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	205356329	205356330	chr1:205356330:G:A	rs2298251	G	A	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	205980701	205980702	chr1:205980702:G:A	rs36138170	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	206005490	206005491	chr1:206005491:T:G	rs982362291	T	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	206108532	206108533	chr1:206108533:T:A	rs28418396	T	A	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	206115532	206115533	chr1:206115533:T:A	rs34352730	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	206580464	206580465	chr1:206580465:T:G	rs2297552	T	G	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	207309820	207309821	chr1:207309821:A:G	rs7525530	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.69757138156076	3.70984946529178	TCCAATTAAA
chr1	207322736	207322737	chr1:207322737:G:A	rs28371590	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	207873938	207873939	chr1:207873939:A:G	rs677715	A	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	207991266	207991267	chr1:207991267:G:A	rs78811499	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr1	207991274	207991275	chr1:207991275:A:C	rs545947	A	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	208054010	208054011	chr1:208054011:C:G	rs2078332	C	G	c	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	208090515	208090516	chr1:208090516:C:T	rs186118149	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	208338005	208338006	chr1:208338006:A:C	rs1499577	A	C	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	208476826	208476827	chr1:208476827:T:C	rs59828019	T	C	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	208631772	208631773	chr1:208631773:C:T	rs75763825	C	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr1	208924442	208924443	chr1:208924443:C:T	rs10779495	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	208936409	208936410	chr1:208936410:C:T	rs115172208	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.869260531930455	7.451151896360449	CCCAATTAAC
chr1	209583666	209583667	chr1:209583667:C:A	rs141904030	C	A	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	209655609	209655610	chr1:209655610:C:T	rs12126519	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	209798294	209798295	chr1:209798295:G:C	rs2236908	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	209798309	209798310	chr1:209798310:A:G	rs2236909	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr1	209879597	209879598	chr1:209879598:T:A	rs117072806	T	A	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr1	210256046	210256047	chr1:210256047:C:G	rs701942	C	G	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	210256053	210256054	chr1:210256054:A:C	rs181829077	A	C	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	210295336	210295337	chr1:210295337:T:G	chr1:210295337:T:G	T	G	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr1	210373966	210373967	chr1:210373967:G:A	rs147600875	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	211928916	211928917	chr1:211928917:T:C	rs544289023	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr1	212655827	212655828	chr1:212655828:A:G	rs2456826	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	7.869260531930455	5.262440642081764	CCCAATTAAC
chr1	212708596	212708597	chr1:212708597:C:G	rs6695772	C	G	G	Alx1.mouse_homeodomain_1	0	1	+	8.16388906539059	7.395592081031309	CCTAATTAGG
chr1	212956715	212956716	chr1:212956716:A:T	chr1:212956716:A:T	A	T	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	212982524	212982525	chr1:212982525:G:T	rs59489266	G	T	T	Alx1.mouse_homeodomain_1	8	1	+	9.417472771290461	8.570744477099081	TCTAATTAGA
chr1	213320383	213320384	chr1:213320384:C:A	rs4359010	C	A	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	213399967	213399968	chr1:213399968:T:C	rs73099703	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	213828916	213828917	chr1:213828917:C:T	rs6693625	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	213984251	213984252	chr1:213984252:T:C	rs4140385	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	214143130	214143131	chr1:214143131:G:A	rs115997802	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	214236677	214236678	chr1:214236678:C:T	rs1795060	C	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	214494868	214494869	chr1:214494869:G:A	rs112112837	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	214525752	214525753	chr1:214525753:C:T	rs938591506	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr1	214549824	214549825	chr1:214549825:G:T	rs4072932	G	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	215058604	215058605	chr1:215058605:C:G	rs11120479	C	G	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	216485614	216485615	chr1:216485615:A:G	rs12757393	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	7.846603954486855	2.858882038217874	TGTAATTAGC
chr1	216553385	216553386	chr1:216553386:T:A	rs7534782	T	A	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	216778564	216778565	chr1:216778565:G:A	chr1:216778565:G:A	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	216779750	216779751	chr1:216779751:C:G	rs12064264	C	G	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	216793604	216793605	chr1:216793605:A:T	rs77526172	A	T	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	216831247	216831248	chr1:216831248:C:T	rs1126022	C	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	217018678	217018679	chr1:217018679:T:C	rs11117750	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	217018696	217018697	chr1:217018697:C:T	rs11572435	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	217140142	217140143	chr1:217140143:T:G	rs141511136	T	G	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	217182904	217182905	chr1:217182905:G:A	rs11117792	G	A	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	217188954	217188955	chr1:217188955:T:C	rs12143637	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.23885861342153	7.669239287099268	TTTAATTACC
chr1	217230657	217230658	chr1:217230658:T:A	rs7535701	T	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	217483794	217483795	chr1:217483795:G:T	rs2998901	G	T	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	218284884	218284885	chr1:218284885:C:T	rs2788193	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.312052953791037	7.575437351336728	TCTAATTATC
chr1	218284886	218284887	chr1:218284887:G:A	rs113161534	G	A	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	218466918	218466919	chr1:218466919:G:C	rs2001552	G	C	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr1	218879829	218879830	chr1:218879830:A:G	rs78964537	A	G	a	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	218931015	218931016	chr1:218931016:T:C	rs147031059	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr1	219022370	219022371	chr1:219022371:G:A	rs77571021	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	219099978	219099979	chr1:219099979:C:A	rs12023673	C	A	c	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	219660397	219660398	chr1:219660398:C:T	rs17006261	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	219730703	219730704	chr1:219730704:G:A	rs2153008	G	A	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	220928430	220928431	chr1:220928431:G:A	rs75609948	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr1	221740743	221740744	chr1:221740744:G:C	rs3922386	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	221802670	221802671	chr1:221802671:C:G	rs12568507	C	G	C	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.993823417438953	CCCAATTACA
chr1	221859142	221859143	chr1:221859143:C:T	rs12144971	C	T	T	Alx1.mouse_homeodomain_1	0	1	+	7.735131894130908	8.304751220453168	CCCAATTAGC
chr1	221892366	221892367	chr1:221892367:T:C	rs7547751	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	222018251	222018252	chr1:222018252:A:G	rs17011202	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	222414216	222414217	chr1:222414217:T:C	rs17461834	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	223480438	223480439	chr1:223480439:A:G	rs11261290	A	G	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	223515860	223515861	chr1:223515861:C:G	rs79681010	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	223811640	223811641	chr1:223811641:A:G	rs113387472	A	G	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	223920233	223920234	chr1:223920234:T:A	rs75363868	T	A	-	Alx1.mouse_homeodomain_1	3	1	-	8.422165645528107	4.694684371836499	TCTAATTAGT
chr1	224068136	224068137	chr1:224068137:A:G	rs1492691	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr1	224540050	224540051	chr1:224540051:G:A	rs712084	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	224540059	224540060	chr1:224540060:T:C	rs74146377	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.233317895140026	4.626498005291335	CCCAATTACC
chr1	224636708	224636709	chr1:224636709:C:T	rs12123347	C	T	T	Alx1.mouse_homeodomain_1	8	1	-	7.879478364183603	8.01360700198315	TCCAATTAGG
chr1	224685016	224685017	chr1:224685017:G:T	rs118046200	G	T	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	225355263	225355264	chr1:225355264:T:A	rs6686051	T	A	t	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr1	225825015	225825016	chr1:225825016:T:C	rs3753659	T	C	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	226063680	226063681	chr1:226063681:C:A	rs34485485	C	A	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	226408508	226408509	chr1:226408509:A:T	rs554354052	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	226483563	226483564	chr1:226483564:C:T	rs61835459	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr1	226732206	226732207	chr1:226732207:C:T	rs10916030	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	226732208	226732209	chr1:226732209:A:C	rs10916031	A	C	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	226816665	226816666	chr1:226816666:A:G	rs6426547	A	G	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	226826247	226826248	chr1:226826248:G:C	rs115770304	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	226886010	226886011	chr1:226886011:T:G	rs1794038	T	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr1	226886039	226886040	chr1:226886040:A:T	rs2236912	A	T	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	227062482	227062483	chr1:227062483:A:G	rs1343896	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	227219233	227219234	chr1:227219234:G:T	rs41270149	G	T	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr1	227319093	227319094	chr1:227319094:C:T	rs7549515	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr1	227791963	227791964	chr1:227791964:C:T	rs72632838	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	228008730	228008731	chr1:228008731:G:A	rs535156775	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr1	228073939	228073940	chr1:228073940:C:T	rs140932036	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr1	228434868	228434869	chr1:228434869:G:C	rs112452996	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	228463568	228463569	chr1:228463569:C:T	rs79241880	C	T	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	228533828	228533829	chr1:228533829:G:T	rs148662000	G	T	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	228541305	228541306	chr1:228541306:T:C	rs140307832	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr1	228543247	228543248	chr1:228543248:G:T	rs942853	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	228862271	228862272	chr1:228862272:A:C	rs801115	A	C	A	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.874801250211958	TTTAATTAAA
chr1	228895994	228895995	chr1:228895995:A:G	rs986056	A	G	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	229167283	229167284	chr1:229167284:A:G	rs2988735	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.879478364183603	2.907798711162862	TCCAATTAGG
chr1	229208032	229208033	chr1:229208033:C:T	rs56164119	C	T	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	229773804	229773805	chr1:229773805:G:A	rs73107435	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	9.292909885781963	8.556294283327654	TCTAATTAAC
chr1	230092044	230092045	chr1:230092045:T:C	rs140388786	T	C	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr1	230174347	230174348	chr1:230174348:C:T	rs10158821	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	230572115	230572116	chr1:230572116:G:T	rs80114319	G	T	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	230984908	230984909	chr1:230984909:T:C	rs7539695	T	C	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr1	231121858	231121859	chr1:231121859:A:G	rs200961166	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	231799748	231799749	chr1:231799749:G:T	rs72760415	G	T	G	Alx1.mouse_homeodomain_1	2	1	-	8.061628744770331	6.82281486899034	TCCAATTACA
chr1	231918501	231918502	chr1:231918502:T:C	rs201343983	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr1	232248609	232248610	chr1:232248610:C:T	rs78880480	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	232405085	232405086	chr1:232405086:T:G	rs969957181	T	G	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	232804527	232804528	chr1:232804528:G:T	chr1:232804528:G:T	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	232804544	232804545	chr1:232804545:T:A	rs10910624	T	A	A	Alx1.mouse_homeodomain_1	5	1	+	8.061628744770331	2.6376469475539768	TCCAATTACA
chr1	233277650	233277651	chr1:233277651:A:G	rs116330189	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr1	233304804	233304805	chr1:233304805:A:G	rs6676062	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	233627448	233627449	chr1:233627449:C:T	rs116211050	C	T	c	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	233707813	233707814	chr1:233707814:G:A	rs9424430	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	233991679	233991680	chr1:233991680:G:A	rs7515355	G	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	234291787	234291788	chr1:234291788:A:C	rs594349	A	C	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	234295269	234295270	chr1:234295270:A:G	rs79537472	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr1	234536185	234536186	chr1:234536186:G:A	rs28380372	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.8478534449682	8.429744809398194	CCTAATTAGA
chr1	234558715	234558716	chr1:234558716:G:A	rs2884424	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr1	234558736	234558737	chr1:234558737:C:T	rs2884425	C	T	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	234600060	234600061	chr1:234600061:C:G	rs6672722	C	G	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	234600107	234600108	chr1:234600108:C:G	rs527526889	C	G	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	234600108	234600109	chr1:234600109:T:G	rs111315083	T	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr1	234600109	234600110	chr1:234600110:G:A	rs564390888	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr1	234671711	234671712	chr1:234671712:A:C	rs621167	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.91565877229958	4.1005263794156415	TCTAATTACA
chr1	234869761	234869762	chr1:234869762:G:A	rs72752293	G	A	g	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr1	234869762	234869763	chr1:234869763:C:T	rs982900	C	T	c	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	235074982	235074983	chr1:235074983:G:A	rs966314863	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	235304811	235304812	chr1:235304812:C:A	rs11582288	C	A	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	235417612	235417613	chr1:235417613:G:A	rs2131924	G	A	a	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr1	235947985	235947986	chr1:235947986:C:T	rs114702325	C	T	c	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	236119549	236119550	chr1:236119550:G:C	rs7527996	G	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr1	236338624	236338625	chr1:236338625:A:C	rs12729455	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	9.551601409090008	8.213685098408467	TCTAATTAAA
chr1	236417295	236417296	chr1:236417296:G:A	rs581722	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	236428226	236428227	chr1:236428227:G:A	rs2996457	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	236428248	236428249	chr1:236428249:A:C	rs2990592	A	C	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	236689866	236689867	chr1:236689867:G:A	rs4659701	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.309859037861343	8.16388906539059	CCCAATTAGG
chr1	236747836	236747837	chr1:236747837:A:G	rs10925211	A	G	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr1	236798963	236798964	chr1:236798964:C:T	rs10925234	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	236854660	236854661	chr1:236854661:T:C	rs77741950	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr1	237411994	237411995	chr1:237411995:T:C	rs4465196	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	237796471	237796472	chr1:237796472:A:G	rs1796909	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	238410040	238410041	chr1:238410041:A:G	rs1021355	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	238599797	238599798	chr1:238599798:T:C	rs535914	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	8.01360700198315	2.0867030148230867	TCCAATTAAG
chr1	238653861	238653862	chr1:238653862:C:T	rs10495418	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	238952457	238952458	chr1:238952458:T:C	rs13374113	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr1	239616618	239616619	chr1:239616619:C:A	rs1256484835	C	A	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr1	239674422	239674423	chr1:239674423:T:A	rs141348179	T	A	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	239675139	239675140	chr1:239675140:G:T	rs16838659	G	T	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	239786505	239786506	chr1:239786506:A:C	rs77464065	A	C	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr1	241118287	241118288	chr1:241118288:C:T	rs143439425	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	243022993	243022994	chr1:243022994:C:T	rs1933281	C	T	.	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	243171973	243171974	chr1:243171974:G:A	rs148304008	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr1	243315710	243315711	chr1:243315711:C:T	rs141522436	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr1	244349757	244349758	chr1:244349758:C:T	rs924518801	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	244349770	244349771	chr1:244349771:T:C	rs542086380	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	245153882	245153883	chr1:245153883:T:C	rs113274794	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.874801250211958	3.903121597191216	TTTAATTAAC
chr1	245184960	245184961	chr1:245184961:T:C	rs10737770	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	245365477	245365478	chr1:245365478:A:C	rs1173847	A	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr1	246052055	246052056	chr1:246052056:C:T	rs10737782	C	T	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr1	246052423	246052424	chr1:246052424:C:G	rs10458426	C	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr1	246068092	246068093	chr1:246068093:C:A	rs10924482	C	A	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr1	246070739	246070740	chr1:246070740:T:G	rs2787967	T	G	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr1	246497696	246497697	chr1:246497697:T:A	rs6657580	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	246687077	246687078	chr1:246687078:C:T	rs6413859	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.563442743761213	9.417472771290461	TCCAATTAGA
chr1	247595884	247595885	chr1:247595885:G:A	rs10802524	G	A	-	Alx1.mouse_homeodomain_1	8	1	+	8.563442743761213	8.69757138156076	TCCAATTAGA
chr1	247648169	247648170	chr1:247648170:C:T	rs28690802	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	247963357	247963358	chr1:247963358:A:C	rs58756835	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	247963366	247963367	chr1:247963367:T:C	rs10788748	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.570744477099081	7.716714449569833	TCTAATTATA
chr1	248247754	248247755	chr1:248247755:G:T	rs4642918	G	T	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr1	248247786	248247787	chr1:248247787:C:T	rs4397683	C	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	248251657	248251658	chr1:248251658:A:G	rs7546964	A	G	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr1	248817484	248817485	chr1:248817485:T:C	rs7419176	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr1	248853004	248853005	chr1:248853005:A:G	rs751731761	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr10	333879	333880	chr10:333880:A:G	rs115705022	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	492619	492620	chr10:492620:G:A	rs4881346	G	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	1642936	1642937	chr10:1642937:C:T	rs10903527	C	T	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	2068760	2068761	chr10:2068761:A:G	rs7908959	A	G	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	2068835	2068836	chr10:2068836:G:A	rs7895097	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr10	2214257	2214258	chr10:2214258:C:A	rs10903698	C	A	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	2380608	2380609	chr10:2380609:T:C	rs12761358	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr10	3132706	3132707	chr10:3132707:A:G	rs148941264	A	G	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	3299177	3299178	chr10:3299178:A:G	rs75935786	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	3516421	3516422	chr10:3516422:G:A	rs184971797	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	3558390	3558391	chr10:3558391:C:T	rs7084460	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	3774939	3774940	chr10:3774940:G:A	rs73578369	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	3876447	3876448	chr10:3876448:T:C	rs943029	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr10	4024358	4024359	chr10:4024359:C:T	rs11252280	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr10	4338661	4338662	chr10:4338662:G:A	rs1571129	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	4372825	4372826	chr10:4372826:C:T	rs74570985	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	5015548	5015549	chr10:5015549:A:G	rs1937889	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	5516497	5516498	chr10:5516498:G:C	rs11591971	G	C	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	5575472	5575473	chr10:5575473:G:A	rs72781960	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	5575507	5575508	chr10:5575508:G:A	rs150802554	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	5587148	5587149	chr10:5587149:C:G	rs182208906	C	G	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	5822536	5822537	chr10:5822537:C:A	rs10508296	C	A	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	6186154	6186155	chr10:6186155:A:T	rs648814	A	T	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	6347951	6347952	chr10:6347952:A:C	rs947473	A	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	6410362	6410363	chr10:6410363:T:C	rs631670	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.01360700198315	3.041927348962409	TCCAATTAAG
chr10	6459225	6459226	chr10:6459226:C:T	rs7099451	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr10	6749500	6749501	chr10:6749501:G:A	rs181866601	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	6749503	6749504	chr10:6749504:T:C	rs17141695	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr10	6749508	6749509	chr10:6749509:C:T	rs114970761	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	7.44398767566089	8.1279520552385	CCCAATTAAG
chr10	6953314	6953315	chr10:6953315:T:C	rs900154101	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	7316173	7316174	chr10:7316174:G:A	rs9919447	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr10	8041060	8041061	chr10:8041061:T:C	rs72782793	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	8712689	8712690	chr10:8712690:G:A	rs57628707	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	8899210	8899211	chr10:8899211:T:C	rs7897000	T	C	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr10	9175610	9175611	chr10:9175611:C:T	rs1149954	C	T	T	Alx1.mouse_homeodomain_1	1	1	-	7.846603954486855	7.565469321814631	TGTAATTAGC
chr10	9896417	9896418	chr10:9896418:T:G	rs2895009	T	G	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	10062528	10062529	chr10:10062529:A:G	rs2804070	A	G	G	Alx1.mouse_homeodomain_1	0	1	-	8.312052953791037	7.742433627468776	TCTAATTATC
chr10	10365065	10365066	chr10:10365066:G:A	rs928520	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	10489513	10489514	chr10:10489514:C:T	rs2477035	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	7.886642584883163	7.150026982428854	TTCAATTAGC
chr10	10514952	10514953	chr10:10514953:A:T	rs11256641	A	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	10527155	10527156	chr10:10527156:T:C	rs9651534	T	C	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr10	11159980	11159981	chr10:11159981:C:T	rs620521	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	11395451	11395452	chr10:11395452:T:C	rs12779264	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	11598875	11598876	chr10:11598876:C:G	rs923756	C	G	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	11905220	11905221	chr10:11905221:G:A	rs185974507	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr10	12214559	12214560	chr10:12214560:A:G	rs2399796	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	12258790	12258791	chr10:12258791:G:A	rs7916879	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	12373148	12373149	chr10:12373149:T:C	rs41325747	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	12381744	12381745	chr10:12381745:G:T	rs11593217	G	T	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr10	12513511	12513512	chr10:12513512:C:A	rs1077273	C	A	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	12513511	12513512	chr10:12513512:C:T	chr10:12513512:C:T	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	12547764	12547765	chr10:12547765:G:A	rs2815634	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	12564465	12564466	chr10:12564466:T:C	rs6602598	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	12677220	12677221	chr10:12677221:C:T	rs10906203	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr10	12677221	12677222	chr10:12677222:A:G	rs10906204	A	G	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr10	12704310	12704311	chr10:12704311:A:G	rs76442899	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	12849496	12849497	chr10:12849497:G:A	rs143353417	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	12849499	12849500	chr10:12849500:G:T	rs11258027	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	13068246	13068247	chr10:13068247:A:C	rs11258167	A	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	13068251	13068252	chr10:13068252:C:T	rs61851365	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	13068252	13068253	chr10:13068253:G:A	rs7893318	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	13229314	13229315	chr10:13229315:G:A	rs12780441	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr10	13740604	13740605	chr10:13740605:G:A	rs6602679	G	A	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	14063059	14063060	chr10:14063060:T:C	rs11258846	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	14617829	14617830	chr10:14617830:G:T	rs912909066	G	T	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	14674637	14674638	chr10:14674638:G:A	rs58784787	G	A	g	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	15236652	15236653	chr10:15236653:A:C	rs11259567	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	15349182	15349183	chr10:15349183:G:A	rs4750628	G	A	A	Alx1.mouse_homeodomain_1	0	1	-	8.346039445977318	8.91565877229958	CCTAATTACA
chr10	16772504	16772505	chr10:16772505:G:A	rs7087515	G	A	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	16789017	16789018	chr10:16789018:G:A	rs61844017	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	16895070	16895071	chr10:16895071:A:C	rs11254268	A	C	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	16949590	16949591	chr10:16949591:T:A	rs7901441	T	A	a	Alx1.mouse_homeodomain_1	0	1	+	8.867637029512398	7.649839169279338	TCTAATTAAG
chr10	16949590	16949591	chr10:16949591:T:C	chr10:16949591:T:C	T	C	a	Alx1.mouse_homeodomain_1	0	1	+	8.867637029512398	8.298017703190137	TCTAATTAAG
chr10	16962559	16962560	chr10:16962560:G:T	rs1687714	G	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	16968732	16968733	chr10:16968733:T:A	rs1687704	T	A	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	16968742	16968743	chr10:16968743:T:C	rs1687703	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr10	17059498	17059499	chr10:17059499:C:A	rs151235084	C	A	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	17643727	17643728	chr10:17643728:A:G	rs2243617	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr10	17643736	17643737	chr10:17643737:C:G	rs114325814	C	G	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr10	17643739	17643740	chr10:17643740:C:A	rs144619071	C	A	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	17761125	17761126	chr10:17761126:C:T	rs71497203	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	17768873	17768874	chr10:17768874:G:T	rs578206209	G	T	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr10	17822020	17822021	chr10:17822021:A:G	rs945289562	A	G	a	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	18136488	18136489	chr10:18136489:A:G	rs11012783	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	18136512	18136513	chr10:18136513:A:G	rs12770520	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	18149442	18149443	chr10:18149443:C:T	rs12765240	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	18409710	18409711	chr10:18409711:G:A	rs67117524	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	19008855	19008856	chr10:19008856:C:T	rs12359032	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr10	19017507	19017508	chr10:19017508:C:A	rs72785219	C	A	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	19038918	19038919	chr10:19038919:A:G	rs72785302	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	19480580	19480581	chr10:19480581:A:G	rs10764037	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr10	19544324	19544325	chr10:19544325:A:C	rs3844354	A	C	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	19570901	19570902	chr10:19570902:T:G	rs76781408	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	19958584	19958585	chr10:19958585:A:G	rs568237695	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	20142264	20142265	chr10:20142265:G:T	rs12356558	G	T	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	20769075	20769076	chr10:20769076:T:C	rs982614395	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	20990368	20990369	chr10:20990369:G:A	rs58569619	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr10	21194738	21194739	chr10:21194739:A:G	rs78953370	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr10	21521688	21521689	chr10:21521689:A:C	rs4083949	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	9.133492773520002	8.497550136729574	TTTAATTAAA
chr10	21798144	21798145	chr10:21798145:C:T	rs531764142	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.9549935751004215	7.536884939530416	GCTAATTAAC
chr10	22586481	22586482	chr10:22586482:T:C	rs56200210	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	22630873	22630874	chr10:22630874:C:A	rs1317172783	C	A	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	22630899	22630900	chr10:22630900:G:A	rs16922530	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr10	23203321	23203322	chr10:23203322:C:T	rs537822412	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr10	23610890	23610891	chr10:23610891:T:C	rs10828514	T	C	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	24313452	24313453	chr10:24313453:C:T	rs16924557	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	24726899	24726900	chr10:24726900:A:T	rs530814741	A	T	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	24765924	24765925	chr10:24765925:A:G	rs7086502	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.69757138156076	8.1279520552385	TCCAATTAAA
chr10	24958543	24958544	chr10:24958544:A:G	rs274302	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	24958569	24958570	chr10:24958570:C:T	rs151234926	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr10	25068654	25068655	chr10:25068655:G:T	rs923757	G	T	G	Alx1.mouse_homeodomain_1	9	1	+	8.16388906539059	7.852546319205846	CCTAATTAGG
chr10	25297085	25297086	chr10:25297086:C:T	rs7100128	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	25618199	25618200	chr10:25618200:G:A	rs7901679	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	25753814	25753815	chr10:25753815:C:G	rs7475986	C	G	G	Alx1.mouse_homeodomain_1	9	1	-	7.44398767566089	7.869260531930455	CCCAATTAAG
chr10	25953101	25953102	chr10:25953102:G:C	rs77297869	G	C	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	26057715	26057716	chr10:26057716:G:C	rs11014938	G	C	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr10	26057721	26057722	chr10:26057722:G:A	rs11014939	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr10	26574776	26574777	chr10:26574777:G:A	rs111793271	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr10	26628407	26628408	chr10:26628408:A:G	rs117971096	A	G	a	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	26628432	26628433	chr10:26628433:G:A	rs79902348	G	A	g	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr10	26925793	26925794	chr10:26925794:A:T	rs2765435	A	T	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr10	28295667	28295668	chr10:28295668:A:G	rs1148174	A	G	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	28442526	28442527	chr10:28442527:C:G	rs78001613	C	G	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	28737059	28737060	chr10:28737060:G:A	rs7899551	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	28931361	28931362	chr10:28931362:A:G	rs12767457	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr10	28976297	28976298	chr10:28976298:C:T	rs932980945	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	29110370	29110371	chr10:29110371:A:G	rs562930	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	29439138	29439139	chr10:29439139:A:C	rs61839301	A	C	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr10	29439186	29439187	chr10:29439187:G:A	rs112228267	G	A	g	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	29590281	29590282	chr10:29590282:C:T	rs542606890	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.44398767566089	8.01360700198315	CCCAATTAAG
chr10	29719336	29719337	chr10:29719337:T:A	rs57203451	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	9.158781247982416	3.7347994507660607	TCTAATTAGC
chr10	29948125	29948126	chr10:29948126:G:C	rs2795599	G	C	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr10	29948147	29948148	chr10:29948148:T:A	rs2776637	T	A	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	29996306	29996307	chr10:29996307:C:A	rs9337946	C	A	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	30055192	30055193	chr10:30055193:T:C	rs61539387	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.867637029512398	8.733508391712851	TCTAATTAAG
chr10	30089933	30089934	chr10:30089934:A:G	rs7078436	A	G	G	Alx1.mouse_homeodomain_1	9	1	+	7.49200941844807	6.8080450388704605	CCCAATTACA
chr10	30549799	30549800	chr10:30549800:C:A	rs11008100	C	A	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	30554543	30554544	chr10:30554544:T:C	rs2292193	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	30565601	30565602	chr10:30565602:C:T	rs9804207	C	T	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	30565608	30565609	chr10:30565609:A:G	rs7477975	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	30573661	30573662	chr10:30573662:T:C	rs6481706	T	C	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	30785158	30785159	chr10:30785159:A:G	rs77803190	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	30785188	30785189	chr10:30785189:G:A	rs916975032	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr10	30794497	30794498	chr10:30794498:A:T	rs7910537	A	T	a	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	30832187	30832188	chr10:30832188:C:T	rs72814404	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	30987617	30987618	chr10:30987618:T:C	rs7893715	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr10	31135020	31135021	chr10:31135021:C:T	rs1268155608	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	31189242	31189243	chr10:31189243:G:A	rs74360807	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	31619811	31619812	chr10:31619812:G:A	rs142605243	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr10	31760200	31760201	chr10:31760201:G:T	rs138709252	G	T	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr10	31972797	31972798	chr10:31972798:T:G	rs11008710	T	G	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	33331591	33331592	chr10:33331592:C:A	rs72790263	C	A	C	Alx1.mouse_homeodomain_1	8	1	+	8.656967248991535	9.292909885781963	TCTAATTACC
chr10	33424643	33424644	chr10:33424644:C:G	rs16934463	C	G	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	33632539	33632540	chr10:33632540:C:A	rs2383995	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.1279520552385	6.5346401290707155	CCCAATTAAA
chr10	34200274	34200275	chr10:34200275:T:G	rs2053450	T	G	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	34200275	34200276	chr10:34200276:T:A	rs2053449	T	A	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	34638372	34638373	chr10:34638373:T:C	rs2490812	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	34732554	34732555	chr10:34732555:G:A	rs35190695	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	34751575	34751576	chr10:34751576:G:A	rs7086123	G	A	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	34912806	34912807	chr10:34912807:T:C	rs115199514	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr10	35236902	35236903	chr10:35236903:G:T	rs34041571	G	T	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	35848747	35848748	chr10:35848748:A:G	rs16905746	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	7.846603954486855	6.992573926957609	TGTAATTAGC
chr10	36096602	36096603	chr10:36096603:C:T	rs10827597	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	36116435	36116436	chr10:36116436:C:T	rs11010458	C	T	T	Alx1.mouse_homeodomain_1	2	1	+	8.061628744770331	8.91565877229958	TCCAATTACA
chr10	36224377	36224378	chr10:36224378:T:C	rs11010573	T	C	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	36441570	36441571	chr10:36441571:G:A	rs1169262281	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	36458090	36458091	chr10:36458091:T:G	rs2505612	T	G	T	Alx1.mouse_homeodomain_1	8	1	-	9.551601409090008	8.91565877229958	TCTAATTAAA
chr10	36759891	36759892	chr10:36759892:C:G	rs7895032	C	G	-	Alx1.mouse_homeodomain_1	0	1	+	8.1279520552385	7.359655070879218	CCCAATTAAA
chr10	36759899	36759900	chr10:36759900:A:G	rs7894929	A	G	-	Alx1.mouse_homeodomain_1	8	1	+	8.1279520552385	7.993823417438953	CCCAATTAAA
chr10	37536273	37536274	chr10:37536274:T:A	rs2505704	T	A	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	37736220	37736221	chr10:37736221:T:C	rs991315027	T	C	.	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr10	39372819	39372820	chr10:39372820:C:T	rs1248522057	C	T	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	39372822	39372823	chr10:39372823:C:T	rs1287213432	C	T	.	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	42970733	42970734	chr10:42970734:C:T	rs61845268	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr10	43318600	43318601	chr10:43318601:G:A	rs2503875	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	43406066	43406067	chr10:43406067:G:A	rs74135755	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr10	43781943	43781944	chr10:43781944:G:A	rs74436621	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.940983387749356	7.204367785295047	ACTAATTAGC
chr10	44460955	44460956	chr10:44460956:A:C	rs1147941	A	C	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr10	44627930	44627931	chr10:44627931:T:C	rs11239177	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	44864452	44864453	chr10:44864453:G:A	rs79048912	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	45562046	45562047	chr10:45562047:A:G	rs907946752	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	46272175	46272176	chr10:46272176:A:C	rs4077333	A	C	.	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	46995451	46995452	chr10:46995452:C:A	rs909462931	C	A	C	Alx1.mouse_homeodomain_1	2	1	+	7.879478364183603	6.640664488403613	TCCAATTAGG
chr10	47015253	47015254	chr10:47015254:C:T	rs200489375	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	47015265	47015266	chr10:47015266:A:G	rs202226428	A	G	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	47219580	47219581	chr10:47219581:C:T	rs12776054	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	48511934	48511935	chr10:48511935:C:A	rs1445155	C	A	C	Alx1.mouse_homeodomain_1	2	1	+	7.735131894130908	6.496318018350917	CCCAATTAGC
chr10	48511935	48511936	chr10:48511936:A:T	rs1445154	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	7.735131894130908	4.0076506204393	CCCAATTAGC
chr10	48526938	48526939	chr10:48526939:C:T	rs10857593	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr10	48576775	48576776	chr10:48576776:T:A	rs10776624	T	A	t	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	49283361	49283362	chr10:49283362:C:G	rs140303879	C	G	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr10	49615934	49615935	chr10:49615935:C:T	rs8178987	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.735131894130908	8.304751220453168	CCCAATTAGC
chr10	49633657	49633658	chr10:49633658:C:T	rs3793791	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	49661478	49661479	chr10:49661479:G:A	rs11101199	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	49838283	49838284	chr10:49838284:A:T	rs34714687	A	T	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	50291884	50291885	chr10:50291885:G:T	rs4935597	G	T	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr10	50324731	50324732	chr10:50324732:G:A	rs7094121	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr10	50509725	50509726	chr10:50509726:A:G	rs2064759	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr10	50551329	50551330	chr10:50551330:C:T	rs10763535	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr10	50561422	50561423	chr10:50561423:C:T	rs7078136	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr10	51592020	51592021	chr10:51592021:A:G	rs7089257	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.422165645528107	3.4504859925073648	TCTAATTAGT
chr10	51680153	51680154	chr10:51680154:C:T	rs117902424	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	51707437	51707438	chr10:51707438:G:A	rs12255839	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	8.422165645528107	TCTAATTAGC
chr10	51707438	51707439	chr10:51707439:C:T	chr10:51707439:C:T	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	9.158781247982416	9.292909885781963	TCTAATTAGC
chr10	51770353	51770354	chr10:51770354:G:T	rs12250879	G	T	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	51933149	51933150	chr10:51933150:A:G	rs7904729	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	51950644	51950645	chr10:51950645:C:T	rs73337271	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr10	52308471	52308472	chr10:52308472:T:G	rs563688058	T	G	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	52308473	52308474	chr10:52308474:A:C	rs965033674	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	52443439	52443440	chr10:52443440:A:C	rs113443672	A	C	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr10	52518798	52518799	chr10:52518799:C:G	rs1730472	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.438879858252715	7.126702564757156	TCCAATTAAC
chr10	52720299	52720300	chr10:52720300:A:T	rs61844266	A	T	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	52953421	52953422	chr10:52953422:G:A	rs55970735	G	A	g	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	53491895	53491896	chr10:53491896:G:A	rs429497	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	54585224	54585225	chr10:54585225:A:C	rs4503435	A	C	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr10	54679753	54679754	chr10:54679754:A:T	rs57629813	A	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	55168540	55168541	chr10:55168541:C:T	rs17531877	C	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	56122166	56122167	chr10:56122167:C:T	rs2133900	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	7.49200941844807	8.346039445977318	CCCAATTACA
chr10	56874835	56874836	chr10:56874836:G:A	rs16909599	G	A	g	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	57599135	57599136	chr10:57599136:T:A	rs79263686	T	A	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	58007376	58007377	chr10:58007377:A:T	rs1930468	A	T	A	Alx1.mouse_homeodomain_1	0	1	-	7.879478364183603	6.661680503950545	TCCAATTAGG
chr10	58672884	58672885	chr10:58672885:G:A	rs12770994	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	58817495	58817496	chr10:58817496:C:T	rs41305703	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	59099649	59099650	chr10:59099650:T:C	rs12761351	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	59099650	59099651	chr10:59099651:A:G	rs192492330	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	59343339	59343340	chr10:59343340:T:C	rs284579	T	C	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr10	59733809	59733810	chr10:59733810:T:A	rs113277919	T	A	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	59936717	59936718	chr10:59936718:A:G	rs80051642	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	9.133492773520002	8.999364135720455	TTTAATTAAA
chr10	60030572	60030573	chr10:60030573:G:A	rs4528269	G	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	60123542	60123543	chr10:60123543:T:C	rs10761460	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	60960256	60960257	chr10:60960257:T:C	rs7085867	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	9.551601409090008	4.563879492821026	TCTAATTAAA
chr10	61175023	61175024	chr10:61175024:C:T	rs141339256	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	61472556	61472557	chr10:61472557:T:C	rs76123450	T	C	C	Alx1.mouse_homeodomain_1	1	1	+	8.17105328609015	8.589161921660155	CTTAATTAGC
chr10	61472561	61472562	chr10:61472562:T:C	rs74442578	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.17105328609015	5.273958776753774	CTTAATTAGC
chr10	61755311	61755312	chr10:61755312:G:A	rs2588993	G	A	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr10	62055154	62055155	chr10:62055155:A:G	rs10821951	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr10	62373912	62373913	chr10:62373913:C:T	rs77080160	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr10	62492583	62492584	chr10:62492584:G:A	rs7921131	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	62638705	62638706	chr10:62638706:C:T	rs10995251	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr10	62997049	62997050	chr10:62997050:T:A	rs72837442	T	A	T	Alx1.mouse_homeodomain_1	6	1	+	9.158781247982416	5.927004300653153	TCTAATTAGC
chr10	63859810	63859811	chr10:63859811:T:C	rs1880068	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	63859824	63859825	chr10:63859825:A:G	rs11599476	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	64396563	64396564	chr10:64396564:A:T	rs1462890997	A	T	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr10	65715291	65715292	chr10:65715292:A:T	rs7069163	A	T	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	65765134	65765135	chr10:65765135:C:A	rs10822630	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.69757138156076	7.1042594553929765	TCCAATTAAA
chr10	65900354	65900355	chr10:65900355:G:A	rs7911866	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	66008366	66008367	chr10:66008367:T:A	rs75208356	T	A	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	66407132	66407133	chr10:66407133:G:C	rs1911484	G	C	C	Alx1.mouse_homeodomain_1	8	1	+	7.735131894130908	7.233317895140026	CCCAATTAGC
chr10	66604281	66604282	chr10:66604282:G:A	rs6480182	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr10	68180776	68180777	chr10:68180777:A:G	rs10823151	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr10	68834063	68834064	chr10:68834064:T:G	rs10762243	T	G	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	68864069	68864070	chr10:68864070:A:G	rs7088802	A	G	a	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr10	69140242	69140243	chr10:69140243:T:C	rs34890029	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	69419353	69419354	chr10:69419354:A:G	rs11597682	A	G	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	69514980	69514981	chr10:69514981:G:T	rs891562	G	T	G	Alx1.mouse_homeodomain_1	8	1	+	8.8478534449682	8.00112515077682	CCTAATTAGA
chr10	69644790	69644791	chr10:69644791:G:T	rs766855258	G	T	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr10	69802203	69802204	chr10:69802204:C:T	rs41277950	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	70176889	70176890	chr10:70176890:T:G	rs79781962	T	G	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr10	70254482	70254483	chr10:70254483:G:A	rs11818439	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	70337389	70337390	chr10:70337390:C:A	rs115701109	C	A	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	70350319	70350320	chr10:70350320:T:C	rs77434946	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	70350369	70350370	chr10:70350370:T:A	rs114416375	T	A	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	70459300	70459301	chr10:70459301:A:C	rs75595811	A	C	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr10	70466540	70466541	chr10:70466541:C:T	rs4641384	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	70777863	70777864	chr10:70777864:C:T	rs67979347	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr10	70912493	70912494	chr10:70912494:A:G	rs10999581	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.23885861342153	3.2671789604007873	TTTAATTACC
chr10	70927326	70927327	chr10:70927327:C:T	rs7902866	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr10	71041404	71041405	chr10:71041405:A:G	rs117373330	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	7.869260531930455	4.97216602259408	CCCAATTAAC
chr10	71169219	71169220	chr10:71169220:T:C	rs72808435	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	71240928	71240929	chr10:71240929:T:C	rs10999742	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	71289564	71289565	chr10:71289565:G:A	rs16928641	G	A	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr10	71314112	71314113	chr10:71314113:G:A	rs10400148	G	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	71314122	71314123	chr10:71314123:T:G	rs11819678	T	G	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	71839131	71839132	chr10:71839132:A:G	rs4747204	A	G	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	71839146	71839147	chr10:71839147:A:G	rs7350390	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	8.69757138156076	8.563442743761213	TCCAATTAAA
chr10	71839167	71839168	chr10:71839168:C:T	rs78542036	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	71958134	71958135	chr10:71958135:A:G	rs12245721	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	72013640	72013641	chr10:72013641:G:T	rs10823898	G	T	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	72523113	72523114	chr10:72523114:T:A	rs12781793	T	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	73887803	73887804	chr10:73887804:G:A	rs543322204	G	A	g	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr10	73887815	73887816	chr10:73887816:G:A	rs190478558	G	A	g	Alx1.mouse_homeodomain_1	8	1	-	7.662075066399709	7.317160771199211	CCTAATTACG
chr10	74071449	74071450	chr10:74071450:T:C	rs113195070	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	74071486	74071487	chr10:74071487:T:C	rs549587516	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr10	74163452	74163453	chr10:74163453:A:C	rs141562698	A	C	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr10	74178460	74178461	chr10:74178461:T:C	rs10824097	T	C	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr10	74359537	74359538	chr10:74359538:C:T	rs10762602	C	T	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	75276835	75276836	chr10:75276836:G:A	rs11599350	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	75770613	75770614	chr10:75770614:T:C	rs556906953	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr10	76301776	76301777	chr10:76301777:T:C	rs2573556	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	76870036	76870037	chr10:76870037:C:G	rs4980113	C	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr10	76904135	76904136	chr10:76904136:A:G	rs7089123	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.304751220453168	5.6979313306044785	TCCAATTAGC
chr10	77154067	77154068	chr10:77154068:C:T	rs7093735	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	77221296	77221297	chr10:77221297:C:T	rs536297	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	77241474	77241475	chr10:77241475:C:G	rs7916784	C	G	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	77639390	77639391	chr10:77639391:G:A	rs2812420	G	A	g	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	77872294	77872295	chr10:77872295:A:G	rs1474435906	A	G	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr10	78421420	78421421	chr10:78421421:C:T	rs6480890	C	T	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr10	78480826	78480827	chr10:78480827:C:T	rs60427575	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	78624580	78624581	chr10:78624581:T:G	rs750680661	T	G	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr10	78796346	78796347	chr10:78796347:C:G	rs78475104	C	G	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	78962023	78962024	chr10:78962024:G:C	rs11002754	G	C	G	Alx1.mouse_homeodomain_1	8	1	+	7.309859037861343	6.8080450388704605	CCCAATTAGG
chr10	79274333	79274334	chr10:79274334:C:T	rs373448144	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	79274356	79274357	chr10:79274357:A:G	rs117656719	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr10	79479864	79479865	chr10:79479865:C:A	rs10824765	C	A	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	80014930	80014931	chr10:80014931:C:T	rs12244122	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	80126984	80126985	chr10:80126985:C:T	rs61859979	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	80132245	80132246	chr10:80132246:G:A	rs2819885	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	80177819	80177820	chr10:80177820:C:T	rs1018723452	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	80552068	80552069	chr10:80552069:C:T	rs12412927	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.087347922669274	7.669239287099268	CCTAATTACC
chr10	80642680	80642681	chr10:80642681:A:C	rs4934387	A	C	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	80680043	80680044	chr10:80680044:T:C	rs61859394	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	81531914	81531915	chr10:81531915:G:C	rs7091000	G	C	g	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	81724724	81724725	chr10:81724725:T:C	rs116343667	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	82396731	82396732	chr10:82396732:G:A	rs7923832	G	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	82477872	82477873	chr10:82477873:A:G	rs10748994	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	82866458	82866459	chr10:82866459:T:C	rs557244	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	83073725	83073726	chr10:83073726:G:T	rs10736241	G	T	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	83235567	83235568	chr10:83235568:T:C	rs11197850	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	8.874801250211958	2.947897263051894	TTTAATTAAC
chr10	83372900	83372901	chr10:83372901:G:C	rs4641399	G	C	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr10	83487934	83487935	chr10:83487935:C:T	rs11591451	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr10	83522644	83522645	chr10:83522645:C:T	rs2882098	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.17105328609015	7.43443768363584	CTTAATTAGC
chr10	83820359	83820360	chr10:83820360:C:T	rs11200666	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	84126638	84126639	chr10:84126639:A:G	rs114035831	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	84244780	84244781	chr10:84244781:C:G	rs150536606	C	G	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	84244787	84244788	chr10:84244788:A:C	rs116351432	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	7.879478364183603	3.749065670253141	TCCAATTAGG
chr10	84522636	84522637	chr10:84522637:G:C	rs143017632	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	7.233317895140026	5.921140601644463	CCCAATTACC
chr10	84891796	84891797	chr10:84891797:A:C	rs141580141	A	C	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	85300370	85300371	chr10:85300371:C:G	rs145134539	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	85449766	85449767	chr10:85449767:C:T	rs6585956	C	T	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	86047632	86047633	chr10:86047633:G:A	rs10788478	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.438879858252715	7.702264255798406	TCCAATTAAC
chr10	86047774	86047775	chr10:86047775:G:A	rs75624291	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	86579302	86579303	chr10:86579303:C:A	rs61858157	C	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	87502959	87502960	chr10:87502960:A:G	rs3758478	A	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	88951687	88951688	chr10:88951688:G:A	rs1228917295	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	88988978	88988979	chr10:88988979:C:T	rs3758483	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	88993376	88993377	chr10:88993377:C:T	rs7076197	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr10	88993377	88993378	chr10:88993378:G:A	rs55803311	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr10	88993387	88993388	chr10:88993388:G:C	rs12359362	G	C	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	89262938	89262939	chr10:89262939:G:A	rs57144189	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	89389121	89389122	chr10:89389122:A:G	rs304499	A	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	89574404	89574405	chr10:89574405:A:G	rs12354579	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	89869154	89869155	chr10:89869155:T:C	rs114065304	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	89929338	89929339	chr10:89929339:T:A	rs28719637	T	A	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	90032411	90032412	chr10:90032412:A:G	rs2419352	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	90038378	90038379	chr10:90038379:T:A	rs17130096	T	A	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr10	90162625	90162626	chr10:90162626:T:C	rs7906565	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	8.346039445977318	5.448944936640942	CCTAATTACA
chr10	90935949	90935950	chr10:90935950:G:A	rs12785137	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr10	90935954	90935955	chr10:90935955:A:C	rs117901966	A	C	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr10	91198741	91198742	chr10:91198742:A:G	rs114529560	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr10	91198749	91198750	chr10:91198750:G:A	rs4933651	G	A	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr10	91341115	91341116	chr10:91341116:C:T	rs759805261	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	91606138	91606139	chr10:91606139:T:C	rs7076799	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	91606153	91606154	chr10:91606154:T:G	rs11186625	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	8.1279520552385	1.83897282053554	CCCAATTAAA
chr10	91683464	91683465	chr10:91683465:G:A	rs10786009	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	93029207	93029208	chr10:93029208:G:A	rs9419763	G	A	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	93259826	93259827	chr10:93259827:C:T	rs12359829	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr10	93468568	93468569	chr10:93468569:C:T	rs114048769	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr10	93468570	93468571	chr10:93468571:C:T	rs1880260	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr10	93468603	93468604	chr10:93468604:C:T	rs541313956	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	93594861	93594862	chr10:93594862:G:A	rs36077620	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	93651939	93651940	chr10:93651940:T:C	rs10882293	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	9.551601409090008	8.981982082767747	TCTAATTAAA
chr10	93724252	93724253	chr10:93724253:A:G	rs7093903	A	G	G	Alx1.mouse_homeodomain_1	0	1	-	9.292909885781963	8.723290559459702	TCTAATTAAC
chr10	93816343	93816344	chr10:93816344:T:C	rs140896117	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	94392367	94392368	chr10:94392368:C:T	rs541704	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	94775985	94775986	chr10:94775986:A:G	rs4244284	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	95069672	95069673	chr10:95069673:G:T	rs7909236	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	95266700	95266701	chr10:95266701:T:C	rs7912686	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr10	95466752	95466753	chr10:95466753:A:T	rs564370	A	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr10	96362838	96362839	chr10:96362839:C:G	rs10882781	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	96476015	96476016	chr10:96476016:G:C	rs6584076	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	96476020	96476021	chr10:96476021:A:G	rs6584077	A	G	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	96585244	96585245	chr10:96585245:T:C	rs535384201	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.69757138156076	8.01360700198315	TCCAATTAAA
chr10	96671637	96671638	chr10:96671638:A:G	rs78340939	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.874801250211958	8.020771222682711	TTTAATTAAC
chr10	97214057	97214058	chr10:97214058:C:G	rs10882876	C	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr10	97355951	97355952	chr10:97355952:T:G	rs10509713	T	G	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr10	98376662	98376663	chr10:98376663:G:A	rs116687408	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	98381269	98381270	chr10:98381270:T:C	rs10786414	T	C	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	98646986	98646987	chr10:98646987:C:T	rs563060	C	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	100615500	100615501	chr10:100615501:G:A	rs7092999	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	100832392	100832393	chr10:100832393:A:G	chr10:100832393:A:G	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	100832392	100832393	chr10:100832393:A:T	rs2495703	A	T	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	101558545	101558546	chr10:101558546:C:T	rs3127245	C	T	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr10	102720901	102720902	chr10:102720902:G:A	rs12783444	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	103091137	103091138	chr10:103091138:G:A	rs11191552	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	103451818	103451819	chr10:103451819:A:G	rs1446235468	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.589161921660155	5.9823420318114655	CCTAATTAGC
chr10	103636726	103636727	chr10:103636727:A:G	rs4917398	A	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	103770327	103770328	chr10:103770328:C:T	rs10748849	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr10	103848721	103848722	chr10:103848722:C:A	rs74157361	C	A	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr10	103919292	103919293	chr10:103919293:C:T	rs3850673	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr10	104070827	104070828	chr10:104070828:A:T	rs74154729	A	T	A	Alx1.mouse_homeodomain_1	4	1	+	8.8478534449682	3.7730848982302954	CCTAATTAGA
chr10	104150462	104150463	chr10:104150463:A:G	rs703333	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr10	104498705	104498706	chr10:104498706:A:C	rs11192084	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	104513018	104513019	chr10:104513019:A:C	rs139669867	A	C	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr10	104513054	104513055	chr10:104513055:A:G	rs10786801	A	G	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	104663709	104663710	chr10:104663710:G:C	rs78779586	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	104735012	104735013	chr10:104735013:A:C	rs1472050	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	104774584	104774585	chr10:104774585:C:G	rs970053	C	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	104774592	104774593	chr10:104774593:T:C	rs970052	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	7.233317895140026	4.336223385803651	CCCAATTACC
chr10	105115627	105115628	chr10:105115628:T:G	rs1452270	T	G	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	105843615	105843616	chr10:105843616:A:G	rs11192625	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr10	106182672	106182673	chr10:106182673:G:C	rs114409952	G	C	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	106182687	106182688	chr10:106182688:T:A	rs11818829	T	A	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	106286350	106286351	chr10:106286351:G:C	rs10748911	G	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	107034195	107034196	chr10:107034196:C:A	rs11193177	C	A	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	107060360	107060361	chr10:107060361:A:T	rs7100323	A	T	T	Alx1.mouse_homeodomain_1	0	1	-	8.874801250211958	7.657003389978898	TTTAATTAAC
chr10	107141669	107141670	chr10:107141670:C:T	rs7916651	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr10	107179315	107179316	chr10:107179316:A:G	rs4085734	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr10	107536651	107536652	chr10:107536652:C:A	rs184170706	C	A	C	Alx1.mouse_homeodomain_1	1	1	-	7.846603954486855	8.74067261241241	TGTAATTAGC
chr10	108202692	108202693	chr10:108202693:C:A	rs317465	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.298017703190137	6.704705777022352	CCTAATTAAG
chr10	110175791	110175792	chr10:110175792:T:A	rs72830427	T	A	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	110723773	110723774	chr10:110723774:G:C	rs10787272	G	C	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	110730777	110730778	chr10:110730778:G:A	rs7072857	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	110802583	110802584	chr10:110802584:G:A	rs11195330	G	A	a	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	110802586	110802587	chr10:110802587:A:G	rs59523266	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	111246354	111246355	chr10:111246355:C:T	rs34045903	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	111648324	111648325	chr10:111648325:T:C	rs1414878	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	112696056	112696057	chr10:112696057:G:T	rs6585172	G	T	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr10	112696067	112696068	chr10:112696068:T:C	rs6585173	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr10	112798382	112798383	chr10:112798383:G:C	rs7082784	G	C	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr10	112980985	112980986	chr10:112980986:G:A	rs7081062	G	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	113953806	113953807	chr10:113953807:A:G	rs151591	A	G	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	113961604	113961605	chr10:113961605:A:G	rs460718	A	G	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	113967447	113967448	chr10:113967448:A:G	rs151600	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	114362343	114362344	chr10:114362344:T:G	rs36110313	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	8.91565877229958	4.785246078369116	TCTAATTACA
chr10	114550832	114550833	chr10:114550833:T:G	rs182974471	T	G	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	114663747	114663748	chr10:114663748:G:T	chr10:114663748:G:T	G	T	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr10	116156621	116156622	chr10:116156622:C:T	rs10787630	C	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	116232905	116232906	chr10:116232906:G:A	rs7097998	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	116714441	116714442	chr10:116714442:C:T	rs10787720	C	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	117365757	117365758	chr10:117365758:T:C	rs570268413	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	117365789	117365790	chr10:117365790:G:A	rs76402367	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr10	117496788	117496789	chr10:117496789:T:C	chr10:117496789:T:C	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr10	117755147	117755148	chr10:117755148:T:C	rs12355479	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.981982082767747	6.375162192919057	CCTAATTAAA
chr10	117820090	117820091	chr10:117820091:T:C	rs10886146	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.91565877229958	6.308838882450887	TCTAATTACA
chr10	118164610	118164611	chr10:118164611:G:C	rs11198295	G	C	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	118315533	118315534	chr10:118315534:T:C	rs11198360	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	118459938	118459939	chr10:118459939:A:G	rs1889855	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	118792776	118792777	chr10:118792777:T:A	rs79515529	T	A	T	Alx1.mouse_homeodomain_1	6	1	+	8.422165645528107	5.190388698198844	TCTAATTAGT
chr10	118850807	118850808	chr10:118850808:T:C	rs117041975	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	118928274	118928275	chr10:118928275:A:G	rs10886341	A	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	119061015	119061016	chr10:119061016:A:G	rs3824822	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	119078506	119078507	chr10:119078507:C:T	rs10736271	C	T	c	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr10	119102892	119102893	chr10:119102893:G:A	rs74157629	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	119664448	119664449	chr10:119664449:C:A	rs7909225	C	A	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr10	120109242	120109243	chr10:120109243:T:C	rs77754169	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	7.44398767566089	2.472308022640148	CCCAATTAAG
chr10	120320181	120320182	chr10:120320182:T:A	rs4559604	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	121139541	121139542	chr10:121139542:G:T	rs75353688	G	T	g	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	121139589	121139590	chr10:121139590:C:A	rs10430702	C	A	c	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	121262216	121262217	chr10:121262217:G:A	rs7076500	G	A	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	121457992	121457993	chr10:121457993:C:T	rs7079213	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.735131894130908	8.304751220453168	CCCAATTAGC
chr10	121801227	121801228	chr10:121801228:A:G	rs187600968	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	121934558	121934559	chr10:121934559:A:G	rs11200270	A	G	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr10	122638612	122638613	chr10:122638613:C:A	rs28410743	C	A	A	Alx1.mouse_homeodomain_1	9	1	+	7.9549935751004215	8.213685098408467	GCTAATTAAC
chr10	122774539	122774540	chr10:122774540:C:T	rs113364535	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	122774548	122774549	chr10:122774549:A:G	rs7077831	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr10	122815597	122815598	chr10:122815598:G:A	rs10902831	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.233317895140026	6.4967022926857165	CCCAATTACC
chr10	123004513	123004514	chr10:123004514:G:A	rs12254453	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr10	123353733	123353734	chr10:123353734:C:T	rs1007821	C	T	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	123705752	123705753	chr10:123705753:G:C	rs11248242	G	C	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	123741932	123741933	chr10:123741933:C:T	rs72841672	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	123744714	123744715	chr10:123744715:A:G	rs11594528	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	123898504	123898505	chr10:123898505:A:G	rs1878621	A	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr10	123925433	123925434	chr10:123925434:T:C	rs9794153	T	C	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr10	124178039	124178040	chr10:124178040:T:C	rs1048759136	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr10	124332218	124332219	chr10:124332219:A:G	rs994844	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	9.417472771290461	6.8106528814417695	TCTAATTAGA
chr10	124418170	124418171	chr10:124418171:T:G	rs1782765	T	G	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr10	124497105	124497106	chr10:124497106:G:C	rs74160914	G	C	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	124497137	124497138	chr10:124497138:C:T	rs3824809	C	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr10	124643742	124643743	chr10:124643743:A:G	rs116485638	A	G	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	124643746	124643747	chr10:124643747:G:C	rs3781464	G	C	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	125042221	125042222	chr10:125042222:C:A	rs191546475	C	A	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	125042257	125042258	chr10:125042258:A:G	rs11598868	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr10	125472871	125472872	chr10:125472872:T:G	rs3910238	T	G	T	Alx1.mouse_homeodomain_1	1	1	+	9.133492773520002	8.239424115594447	TTTAATTAAA
chr10	125511447	125511448	chr10:125511448:T:C	rs7076447	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr10	126381104	126381105	chr10:126381105:G:A	rs139664539	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	126769648	126769649	chr10:126769649:T:C	rs4962611	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr10	126865284	126865285	chr10:126865285:T:C	rs7095676	T	C	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	126867979	126867980	chr10:126867980:C:A	rs112255324	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	126961141	126961142	chr10:126961142:G:T	rs996334692	G	T	T	Alx1.mouse_homeodomain_1	1	1	-	8.298017703190137	6.704705777022352	CCTAATTAAG
chr10	126961162	126961163	chr10:126961163:G:A	rs36180103	G	A	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	127039057	127039058	chr10:127039058:C:T	rs58652460	C	T	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	127041993	127041994	chr10:127041994:T:C	rs17771551	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	127149630	127149631	chr10:127149631:T:C	rs2489391	T	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	127154784	127154785	chr10:127154785:T:C	rs2890091	T	C	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	127580122	127580123	chr10:127580123:G:A	rs12355763	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	7.49200941844807	7.147095123247572	CCCAATTACA
chr10	127741279	127741280	chr10:127741280:T:A	rs72843160	T	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	127833876	127833877	chr10:127833877:T:C	rs486238	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	128494946	128494947	chr10:128494947:A:G	rs12359492	A	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	128950920	128950921	chr10:128950921:A:G	rs1452855	A	G	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	129065728	129065729	chr10:129065729:T:C	rs11016657	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	129143525	129143526	chr10:129143526:C:G	rs7909469	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.23169439272197	6.9195170992264075	TCTAATTACG
chr10	129236038	129236039	chr10:129236039:C:A	rs111908834	C	A	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr10	129281184	129281185	chr10:129281185:A:T	rs61859457	A	T	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr10	129288879	129288880	chr10:129288880:C:T	rs2542621	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	129449085	129449086	chr10:129449086:T:C	rs117541429	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	129495381	129495382	chr10:129495382:G:T	rs4751091	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.087347922669274	8.346039445977318	CCTAATTACC
chr10	129581347	129581348	chr10:129581348:C:T	rs76953493	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	129627146	129627147	chr10:129627147:A:G	rs117980109	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	129725399	129725400	chr10:129725400:T:C	rs913117	T	C	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	129855179	129855180	chr10:129855180:T:C	rs11016977	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr10	129960804	129960805	chr10:129960805:T:C	rs9804201	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr10	129970080	129970081	chr10:129970081:A:T	rs74663589	A	T	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr10	130205424	130205425	chr10:130205425:A:T	rs11017133	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	9.551601409090008	6.319824461760745	TCTAATTAAA
chr10	130208164	130208165	chr10:130208165:A:G	rs6482777	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	7.309859037861343	4.703039148012652	CCCAATTAGG
chr10	130354324	130354325	chr10:130354325:G:A	rs55829954	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr10	130748919	130748920	chr10:130748920:T:C	rs4750827	T	C	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr10	130762359	130762360	chr10:130762360:G:A	rs74161201	G	A	g	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	131143865	131143866	chr10:131143866:C:T	rs11017746	C	T	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr10	131143896	131143897	chr10:131143897:T:C	rs11017747	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	131153774	131153775	chr10:131153775:A:G	rs2996077	A	G	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr10	131391273	131391274	chr10:131391274:G:C	rs3123206	G	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	131561085	131561086	chr10:131561086:C:T	rs7077859	C	T	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	131814795	131814796	chr10:131814796:G:C	rs12263358	G	C	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	131820607	131820608	chr10:131820608:A:C	rs4897753	A	C	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr10	132069066	132069067	chr10:132069067:T:G	rs61865707	T	G	T	Alx1.mouse_homeodomain_1	8	1	-	8.1279520552385	7.49200941844807	CCCAATTAAA
chr10	132101399	132101400	chr10:132101400:G:A	rs2379226	G	A	g	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr10	132132191	132132192	chr10:132132192:T:C	rs2814184	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	132147459	132147460	chr10:132147460:G:A	rs78826594	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr10	132147464	132147465	chr10:132147465:C:T	rs73397670	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr10	132568513	132568514	chr10:132568514:T:C	rs113565688	T	C	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	132878605	132878606	chr10:132878606:A:G	rs4880459	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr10	133068816	133068817	chr10:133068817:T:C	rs191476998	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	133405339	133405340	chr10:133405340:G:T	rs2265907	G	T	g	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr10	133615790	133615791	chr10:133615791:G:T	rs4365009	G	T	.	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	133617613	133617614	chr10:133617614:A:G	rs4454678	A	G	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	231283	231284	chr11:231284:T:A	rs12364172	T	A	T	Alx1.mouse_homeodomain_1	2	1	+	8.74067261241241	6.647828709103172	TTTAATTAGC
chr11	231304	231305	chr11:231305:G:A	rs11602248	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	285652	285653	chr11:285653:G:C	rs34459139	G	C	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	338972	338973	chr11:338973:C:G	rs764402915	C	G	-	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	469153	469154	chr11:469154:T:C	rs112153670	T	C	-	Alx1.mouse_homeodomain_1	3	1	-	7.802937221462287	5.196117331613596	TCCAATTACC
chr11	1005107	1005108	chr11:1005108:A:G	rs7394783	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	8.981982082767747	4.010302429747005	CCTAATTAAA
chr11	1275032	1275033	chr11:1275033:G:C	rs5744033	G	C	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	1577048	1577049	chr11:1577049:C:G	rs12279786	C	G	-	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr11	1577066	1577067	chr11:1577067:A:T	rs191983160	A	T	-	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	2755578	2755579	chr11:2755579:C:T	rs7924946	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr11	3381072	3381073	chr11:3381073:G:C	rs11026824	G	C	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	3608965	3608966	chr11:3608966:G:A	rs79355690	G	A	g	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	3879684	3879685	chr11:3879685:C:T	rs7120828	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	4148166	4148167	chr11:4148167:G:A	rs1019356444	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	4511777	4511778	chr11:4511778:A:G	rs1430402	A	G	a	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr11	4626169	4626170	chr11:4626170:A:T	rs74836383	A	T	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	4958922	4958923	chr11:4958923:A:G	rs7105981	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	5129597	5129598	chr11:5129598:A:G	rs55658554	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.304751220453168	5.6979313306044785	TCCAATTAGC
chr11	5205238	5205239	chr11:5205239:T:G	rs12788935	T	G	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	5205240	5205241	chr11:5205241:T:A	rs12788941	T	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	5338017	5338018	chr11:5338018:T:C	rs6578607	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	9.551601409090008	6.9447815192413165	TCTAATTAAA
chr11	5761095	5761096	chr11:5761096:G:A	rs144166021	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	6030098	6030099	chr11:6030099:T:C	rs77053285	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	6912057	6912058	chr11:6912058:T:C	rs10769736	T	C	t	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr11	7422614	7422615	chr11:7422615:G:T	rs12799687	G	T	T	Alx1.mouse_homeodomain_1	9	1	-	8.087347922669274	8.346039445977318	CCTAATTACC
chr11	7436859	7436860	chr11:7436860:A:G	rs7102917	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr11	7436867	7436868	chr11:7436868:C:T	rs4313570	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	8097750	8097751	chr11:8097751:A:G	rs55892969	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	8263447	8263448	chr11:8263448:T:C	rs204929	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	8263461	8263462	chr11:8263462:G:A	rs536362327	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	8773532	8773533	chr11:8773533:G:A	rs11042059	G	A	g	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	8909975	8909976	chr11:8909976:A:G	rs141414144	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr11	9028387	9028388	chr11:9028388:A:G	rs1111010	A	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	9045719	9045720	chr11:9045720:T:C	rs79274828	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	9610172	9610173	chr11:9610173:A:T	rs12419525	A	T	a	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	9849565	9849566	chr11:9849566:T:C	rs7108907	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.438879858252715	5.8320599684040255	TCCAATTAAC
chr11	9909056	9909057	chr11:9909057:G:T	rs17271223	G	T	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr11	9923276	9923277	chr11:9923277:C:T	rs7102482	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	10269040	10269041	chr11:10269041:A:G	rs59928017	A	G	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr11	10366285	10366286	chr11:10366286:T:C	rs10840395	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	8.279462745990756	TTTAATTAAA
chr11	10481443	10481444	chr11:10481444:C:T	rs73409954	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	10554719	10554720	chr11:10554720:C:T	rs72861037	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	11865459	11865460	chr11:11865460:C:T	rs79798880	C	T	.	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	11945811	11945812	chr11:11945812:G:A	rs10831710	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr11	11995613	11995614	chr11:11995614:C:T	rs2035933	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	12029104	12029105	chr11:12029105:G:A	rs11022119	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr11	12029134	12029135	chr11:12029135:G:T	rs11606819	G	T	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	12030350	12030351	chr11:12030351:T:A	rs4757083	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	12051278	12051279	chr11:12051279:C:T	rs12798137	C	T	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	12090579	12090580	chr11:12090580:T:C	rs7110277	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr11	12090590	12090591	chr11:12090591:A:C	rs554855619	A	C	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	12181913	12181914	chr11:12181914:C:T	rs7104778	C	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	12201257	12201258	chr11:12201258:T:A	rs560397618	T	A	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr11	12201259	12201260	chr11:12201260:T:C	rs529110055	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	12214178	12214179	chr11:12214179:C:T	rs12291267	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	12245399	12245400	chr11:12245400:C:T	rs2201348	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr11	12708489	12708490	chr11:12708490:G:A	rs547739989	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	12989427	12989428	chr11:12989428:A:G	rs61878848	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	12989455	12989456	chr11:12989456:C:A	rs61878849	C	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr11	13261912	13261913	chr11:13261913:A:G	rs750188638	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr11	13335635	13335636	chr11:13335636:G:A	rs10832027	G	A	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	13860086	13860087	chr11:13860087:C:G	rs12281593	C	G	C	Alx1.mouse_homeodomain_1	2	1	+	8.1279520552385	5.9824845282727415	CCCAATTAAA
chr11	13927724	13927725	chr11:13927725:C:A	rs1354900	C	A	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr11	14075591	14075592	chr11:14075592:C:T	rs2178242	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	14141813	14141814	chr11:14141814:G:T	rs12226112	G	T	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr11	14790139	14790140	chr11:14790140:A:G	rs10766192	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	15987441	15987442	chr11:15987442:C:A	rs4757378	C	A	C	Alx1.mouse_homeodomain_1	9	1	+	7.869260531930455	8.1279520552385	CCCAATTAAC
chr11	16204878	16204879	chr11:16204879:G:C	rs147166677	G	C	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr11	16378812	16378813	chr11:16378813:A:T	rs55820833	A	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	16403108	16403109	chr11:16403109:G:C	rs1503441	G	C	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	16855144	16855145	chr11:16855145:G:A	rs71484734	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	17001346	17001347	chr11:17001347:T:C	rs1468489	T	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr11	17076041	17076042	chr11:17076042:C:T	chr11:17076042:C:T	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.563442743761213	9.417472771290461	TCCAATTAGA
chr11	17184971	17184972	chr11:17184972:A:T	rs664382	A	T	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	17820013	17820014	chr11:17820014:A:T	rs7109836	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	17820014	17820015	chr11:17820015:A:T	rs7109837	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	19460323	19460324	chr11:19460324:G:C	rs719801	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	19484215	19484216	chr11:19484216:G:C	rs10833121	G	C	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	19631871	19631872	chr11:19631872:C:A	rs550660653	C	A	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr11	19827760	19827761	chr11:19827761:T:A	rs796122089	T	A	T	Alx1.mouse_homeodomain_1	2	1	+	8.17105328609015	6.078209382780911	CTTAATTAGC
chr11	19827775	19827776	chr11:19827776:T:G	rs796674885	T	G	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr11	19913332	19913333	chr11:19913333:C:T	rs2707101	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr11	19935729	19935730	chr11:19935730:G:A	rs149629994	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.1279520552385	7.709843419668494	CCCAATTAAA
chr11	20162288	20162289	chr11:20162289:T:G	rs11025417	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.438879858252715	5.160433974992616	TCCAATTAAC
chr11	20203683	20203684	chr11:20203684:G:A	rs2222343	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	20546828	20546829	chr11:20546829:A:G	rs10766691	A	G	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr11	20603840	20603841	chr11:20603841:G:A	rs2241942	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr11	21076691	21076692	chr11:21076692:G:A	rs10833453	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	21472651	21472652	chr11:21472652:A:G	rs4617576	A	G	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	21622707	21622708	chr11:21622708:A:G	rs7109186	A	G	G	Alx1.mouse_homeodomain_1	9	1	+	9.417472771290461	8.733508391712851	TCTAATTAGA
chr11	21668328	21668329	chr11:21668329:G:T	rs11026152	G	T	G	Alx1.mouse_homeodomain_1	9	1	+	7.309859037861343	6.998516291676599	CCCAATTAGG
chr11	22079521	22079522	chr11:22079522:T:G	rs758859284	T	G	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr11	22546941	22546942	chr11:22546942:C:T	rs2048668	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	22683113	22683114	chr11:22683114:A:T	rs111898628	A	T	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	23138971	23138972	chr11:23138972:C:G	rs7933580	C	G	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	23170828	23170829	chr11:23170829:G:C	rs1384474	G	C	G	Alx1.mouse_homeodomain_1	0	1	-	7.233317895140026	6.465020910780744	CCCAATTACC
chr11	23574435	23574436	chr11:23574436:G:A	rs10834146	G	A	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr11	24243658	24243659	chr11:24243659:C:T	rs73438263	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	24479504	24479505	chr11:24479505:A:G	rs12279918	A	G	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	24580510	24580511	chr11:24580511:G:A	rs10834396	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	24659985	24659986	chr11:24659986:G:T	rs3923615	G	T	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	24661341	24661342	chr11:24661342:A:G	rs116793594	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	25242976	25242977	chr11:25242977:A:G	rs2042683	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.309859037861343	2.338179384840601	CCCAATTAGG
chr11	25449345	25449346	chr11:25449346:C:T	rs73445921	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	25745944	25745945	chr11:25745945:C:A	rs191259087	C	A	c	Alx1.mouse_homeodomain_1	1	1	+	7.8208649373008745	6.22755301113309	GCTAATTAGC
chr11	25920914	25920915	chr11:25920915:A:C	rs10767476	A	C	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr11	26228750	26228751	chr11:26228751:A:G	rs1870758	A	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	26909058	26909059	chr11:26909059:T:C	rs7101730	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	9.158781247982416	8.589161921660155	TCTAATTAGC
chr11	27206345	27206346	chr11:27206346:G:C	chr11:27206346:G:C	G	C	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	27248050	27248051	chr11:27248051:T:C	rs1079303	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	8.01360700198315	2.0867030148230867	TCCAATTAAG
chr11	27898413	27898414	chr11:27898414:A:G	rs7110491	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr11	28461235	28461236	chr11:28461236:A:G	rs10835342	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.981982082767747	6.375162192919057	CCTAATTAAA
chr11	28551158	28551159	chr11:28551159:G:C	rs77748297	G	C	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	28703288	28703289	chr11:28703289:A:G	rs489437	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	29265900	29265901	chr11:29265901:A:G	rs74596215	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	29333803	29333804	chr11:29333804:C:T	rs7106909	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr11	30535950	30535951	chr11:30535951:G:A	rs117025040	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr11	30639373	30639374	chr11:30639374:T:C	rs374539	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr11	30760030	30760031	chr11:30760031:T:C	rs7115201	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	31691824	31691825	chr11:31691825:C:T	rs968936884	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	31804213	31804214	chr11:31804214:A:T	chr11:31804214:A:T	A	T	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr11	32494598	32494599	chr11:32494599:G:T	rs72908947	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	32671754	32671755	chr11:32671755:C:T	rs7129723	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	33047103	33047104	chr11:33047104:T:C	rs1967729	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.49200941844807	2.5203297654273293	CCCAATTACA
chr11	33169268	33169269	chr11:33169269:T:C	rs11032190	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.438879858252715	7.869260531930455	TCCAATTAAC
chr11	33559163	33559164	chr11:33559164:T:C	rs10836072	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	33559166	33559167	chr11:33559167:C:T	rs12223694	C	T	c	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	33619598	33619599	chr11:33619599:T:C	rs77162322	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.69757138156076	8.1279520552385	TCCAATTAAA
chr11	34345814	34345815	chr11:34345815:T:C	rs10742312	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	34345815	34345816	chr11:34345816:G:A	rs10742313	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	34523769	34523770	chr11:34523770:G:A	rs3901901	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr11	34603691	34603692	chr11:34603692:C:T	rs286947	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	34916762	34916763	chr11:34916763:T:C	rs1049307	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr11	35004134	35004135	chr11:35004135:C:G	rs2762969	C	G	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr11	35014203	35014204	chr11:35014204:A:G	rs75978971	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	35249871	35249872	chr11:35249872:G:A	rs10836356	G	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	35275224	35275225	chr11:35275225:G:A	rs7105690	G	A	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	35337891	35337892	chr11:35337892:A:G	rs7926910	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	35965226	35965227	chr11:35965227:C:A	rs10836475	C	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	35998698	35998699	chr11:35998699:G:T	rs115350975	G	T	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	36091449	36091450	chr11:36091450:A:G	rs1995223	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.874801250211958	6.267981360363268	TTTAATTAAC
chr11	36154707	36154708	chr11:36154708:C:T	rs7111826	C	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	36447751	36447752	chr11:36447752:C:T	rs186085570	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr11	36447766	36447767	chr11:36447767:G:C	rs11033622	G	C	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	36658905	36658906	chr11:36658906:T:A	rs560150678	T	A	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	36831978	36831979	chr11:36831979:T:C	rs10836619	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	37117962	37117963	chr11:37117963:T:A	rs2126179	T	A	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr11	38014721	38014722	chr11:38014722:C:T	rs76114525	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	39013722	39013723	chr11:39013723:G:C	rs2901995	G	C	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr11	40446514	40446515	chr11:40446515:A:C	rs7944171	A	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr11	40459274	40459275	chr11:40459275:T:C	rs1440118	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr11	41458885	41458886	chr11:41458886:G:T	rs114674187	G	T	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr11	41826660	41826661	chr11:41826661:T:C	rs12803566	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	7.735131894130908	2.747409977861927	CCCAATTAGC
chr11	42822911	42822912	chr11:42822912:C:T	rs7942425	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	43223355	43223356	chr11:43223356:A:G	rs11037366	A	G	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	43790680	43790681	chr11:43790681:G:A	rs72892493	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	44774046	44774047	chr11:44774047:A:C	rs4755892	A	C	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	44878220	44878221	chr11:44878221:G:C	rs12804160	G	C	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	45026976	45026977	chr11:45026977:A:T	rs1028188194	A	T	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr11	45041783	45041784	chr11:45041784:C:A	rs140059659	C	A	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	45221960	45221961	chr11:45221961:T:C	rs3758723	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr11	45221991	45221992	chr11:45221992:A:T	rs3758722	A	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	45250657	45250658	chr11:45250658:A:T	rs114453422	A	T	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	45282713	45282714	chr11:45282714:T:C	rs2863183	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	45733161	45733162	chr11:45733162:A:G	rs2666898	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr11	46120271	46120272	chr11:46120272:T:A	rs74366855	T	A	t	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	46276338	46276339	chr11:46276339:G:A	rs550284303	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	46494351	46494352	chr11:46494352:A:G	rs3802888	A	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	46901555	46901556	chr11:46901556:C:T	rs61382645	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	47002981	47002982	chr11:47002982:T:A	rs35705366	T	A	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr11	48191435	48191436	chr11:48191436:C:T	rs7938715	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr11	48191449	48191450	chr11:48191450:G:C	rs12577881	G	C	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr11	48249734	48249735	chr11:48249735:C:T	rs1503169	C	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr11	50149552	50149553	chr11:50149553:T:C	rs2088292	T	C	.	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr11	56783836	56783837	chr11:56783837:T:G	rs7119394	T	G	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr11	56842389	56842390	chr11:56842390:T:C	rs764858	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	57094877	57094878	chr11:57094878:C:G	rs72914001	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	7.852546319205846	7.350732320214965	CCTAATTAGT
chr11	57777011	57777012	chr11:57777012:T:C	rs17455626	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr11	58845602	58845603	chr11:58845603:T:C	rs4939231	T	C	.	Alx1.mouse_homeodomain_1	5	1	+	9.551601409090008	4.563879492821026	TCTAATTAAA
chr11	59010852	59010853	chr11:59010853:C:G	rs181620554	C	G	.	Alx1.mouse_homeodomain_1	1	1	+	9.551601409090008	8.239424115594447	TCTAATTAAA
chr11	60428685	60428686	chr11:60428686:T:C	rs12422164	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.061628744770331	7.377664365192722	TCCAATTACA
chr11	60481052	60481053	chr11:60481053:T:C	rs1336194208	T	C	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	60774275	60774276	chr11:60774276:T:C	rs511028	T	C	c	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr11	61574885	61574886	chr11:61574886:G:A	rs145639110	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr11	61756893	61756894	chr11:61756894:A:C	rs198461	A	C	C	Alx1.mouse_homeodomain_1	4	1	+	7.233317895140026	1.7715512444188715	CCCAATTACC
chr11	61844237	61844238	chr11:61844238:T:C	rs117983270	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr11	61851135	61851136	chr11:61851136:A:G	rs174592	A	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	61978480	61978481	chr11:61978481:G:A	rs2028062	G	A	A	Alx1.mouse_homeodomain_1	1	1	-	9.158781247982416	8.74067261241241	TCTAATTAGC
chr11	62142854	62142855	chr11:62142855:T:A	rs563838831	T	A	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	62171272	62171273	chr11:62171273:C:T	rs112201321	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	62217415	62217416	chr11:62217416:C:T	rs78660169	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.1279520552385	7.709843419668494	CCCAATTAAA
chr11	62302066	62302067	chr11:62302067:G:A	rs2178259	G	A	g	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	62428090	62428091	chr11:62428091:A:G	rs144060389	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr11	62538676	62538677	chr11:62538677:G:A	rs549766435	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	63531467	63531468	chr11:63531468:C:T	rs75233837	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	64097610	64097611	chr11:64097611:G:T	rs570340291	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	64764466	64764467	chr11:64764467:C:G	rs566481127	C	G	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr11	64764467	64764468	chr11:64764468:A:T	rs535373619	A	T	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr11	64779418	64779419	chr11:64779419:G:A	rs487105	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	64779419	64779420	chr11:64779420:G:A	rs566563297	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	64862247	64862248	chr11:64862248:A:G	rs4930685	A	G	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	65556804	65556805	chr11:65556805:C:T	rs11227223	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.087347922669274	8.656967248991535	CCTAATTACC
chr11	65861713	65861714	chr11:65861714:C:T	rs1168353947	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr11	67701250	67701251	chr11:67701251:G:A	rs12419665	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	67704673	67704674	chr11:67704674:T:C	rs4930217	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.346039445977318	7.49200941844807	CCTAATTACA
chr11	68504054	68504055	chr11:68504055:A:T	rs538631344	A	T	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr11	69246477	69246478	chr11:69246478:A:G	rs61881140	A	G	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	70467767	70467768	chr11:70467768:A:G	rs61885873	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	70582371	70582372	chr11:70582372:A:G	rs4488220	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	70631852	70631853	chr11:70631853:C:T	rs74749783	C	T	c	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	71157608	71157609	chr11:71157609:G:A	rs7123898	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.993823417438953	8.8478534449682	CCCAATTAGA
chr11	71201137	71201138	chr11:71201138:C:T	rs79715696	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	7.879478364183603	8.733508391712851	TCCAATTAGG
chr11	72041559	72041560	chr11:72041560:C:G	chr11:72041560:C:G	C	G	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr11	72067028	72067029	chr11:72067029:T:C	rs10400327	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	72112179	72112180	chr11:72112180:T:G	rs558483134	T	G	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr11	72659512	72659513	chr11:72659513:C:T	rs12804316	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	72870248	72870249	chr11:72870249:T:C	rs10898887	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	73127467	73127468	chr11:73127468:A:C	rs139395844	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	7.852546319205846	3.722133625275384	CCTAATTAGT
chr11	73245641	73245642	chr11:73245642:C:T	rs143711642	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	73416480	73416481	chr11:73416481:G:C	rs73542979	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	73565854	73565855	chr11:73565855:C:T	rs12421053	C	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	74257790	74257791	chr11:74257791:T:C	rs3897548	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	7.49200941844807	4.88518952859938	CCCAATTACA
chr11	74739619	74739620	chr11:74739620:A:G	rs7938764	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr11	75078413	75078414	chr11:75078414:C:T	rs78472272	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.309859037861343	7.879478364183603	CCCAATTAGG
chr11	75082720	75082721	chr11:75082721:A:G	rs116801122	A	G	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr11	75125692	75125693	chr11:75125693:G:C	rs74808140	G	C	g	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	75603076	75603077	chr11:75603077:G:A	rs80080519	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.23169439272197	7.886780097521472	TCTAATTACG
chr11	76622151	76622152	chr11:76622152:T:G	rs7101927	T	G	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	76762660	76762661	chr11:76762661:C:T	rs1149599	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	77821376	77821377	chr11:77821377:T:G	chr11:77821377:T:G	T	G	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr11	78041465	78041466	chr11:78041466:C:G	rs7129673	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	8.589161921660155	8.087347922669274	CCTAATTAGC
chr11	78168541	78168542	chr11:78168542:G:A	rs142988635	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr11	78333169	78333170	chr11:78333170:T:G	rs112555416	T	G	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	78393352	78393353	chr11:78393353:G:C	rs10793311	G	C	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	78651173	78651174	chr11:78651174:T:C	rs12420711	T	C	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	78860873	78860874	chr11:78860874:G:A	chr11:78860874:G:A	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	79583021	79583022	chr11:79583022:T:C	rs11237918	T	C	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	79784156	79784157	chr11:79784157:T:C	rs17835798	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	79859943	79859944	chr11:79859944:C:T	rs283315	C	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr11	80442764	80442765	chr11:80442765:A:G	rs2443952	A	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	80925496	80925497	chr11:80925497:G:T	rs73508945	G	T	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	81890357	81890358	chr11:81890358:A:C	rs4943857	A	C	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr11	82534065	82534066	chr11:82534066:C:T	rs1939642	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	82791888	82791889	chr11:82791889:A:G	rs147306662	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.8478534449682	8.16388906539059	CCTAATTAGA
chr11	83556004	83556005	chr11:83556005:G:A	rs581178	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	83738726	83738727	chr11:83738727:C:A	rs72954544	C	A	C	Alx1.mouse_homeodomain_1	9	1	+	8.087347922669274	8.346039445977318	CCTAATTACC
chr11	83774288	83774289	chr11:83774289:T:C	rs116749191	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	83800473	83800474	chr11:83800474:C:T	rs1961555	C	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	83909991	83909992	chr11:83909992:G:A	rs61901830	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr11	85647954	85647955	chr11:85647955:C:T	rs886048712	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	85793869	85793870	chr11:85793870:T:C	rs10898409	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	86008769	86008770	chr11:86008770:C:G	rs72961111	C	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr11	86152019	86152020	chr11:86152020:A:G	rs118144143	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	86303004	86303005	chr11:86303005:T:G	rs80021571	T	G	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr11	86450104	86450105	chr11:86450105:A:C	rs4944581	A	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	86915137	86915138	chr11:86915138:G:A	rs115478808	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	86916333	86916334	chr11:86916334:T:C	rs115458743	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	86916335	86916336	chr11:86916336:A:G	rs2212761	A	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	86939239	86939240	chr11:86939240:T:C	rs4631906	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	8.91565877229958	8.346039445977318	TCTAATTACA
chr11	86939259	86939260	chr11:86939260:A:C	rs189973116	A	C	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	88354359	88354360	chr11:88354360:A:G	rs7107123	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	88830815	88830816	chr11:88830816:T:C	rs506724	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	88887239	88887240	chr11:88887240:C:A	rs118099397	C	A	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	89120238	89120239	chr11:89120239:C:T	rs34066282	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.91565877229958	8.497550136729574	TCTAATTACA
chr11	89169946	89169947	chr11:89169947:T:C	rs11018520	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.312052953791037	7.458022926261789	TCTAATTATC
chr11	89405693	89405694	chr11:89405694:G:A	rs116772818	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	90288617	90288618	chr11:90288618:C:T	rs10765304	C	T	c	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	90433070	90433071	chr11:90433071:T:C	rs79375221	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	90836154	90836155	chr11:90836155:T:C	rs114825467	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	91082995	91082996	chr11:91082996:G:A	rs36089760	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	91218965	91218966	chr11:91218966:A:G	rs16915824	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	91230412	91230413	chr11:91230413:T:C	rs12808429	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.061628744770331	7.377664365192722	TCCAATTACA
chr11	91240249	91240250	chr11:91240250:G:A	rs10830684	G	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	91650493	91650494	chr11:91650494:A:G	rs2568721	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr11	92058178	92058179	chr11:92058179:T:G	rs1945853	T	G	T	Alx1.mouse_homeodomain_1	4	1	-	8.874801250211958	3.413034599490803	TTTAATTAAC
chr11	92063307	92063308	chr11:92063308:G:A	rs1390769	G	A	g	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	92137776	92137777	chr11:92137777:G:C	rs10830854	G	C	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	92298091	92298092	chr11:92298092:G:C	rs1202381	G	C	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr11	92384834	92384835	chr11:92384835:C:T	rs184922006	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr11	92500422	92500423	chr11:92500423:C:A	rs648386	C	A	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr11	92583817	92583818	chr11:92583818:G:A	rs7950462	G	A	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	92772677	92772678	chr11:92772678:A:G	rs10765560	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	92803386	92803387	chr11:92803387:A:G	rs3912649	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.438879858252715	5.8320599684040255	TCCAATTAAC
chr11	93079755	93079756	chr11:93079756:A:G	rs1508617	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr11	93160487	93160488	chr11:93160488:A:T	rs1508607	A	T	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	93234830	93234831	chr11:93234831:G:T	chr11:93234831:G:T	G	T	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr11	94075695	94075696	chr11:94075696:T:G	rs2226927	T	G	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	94147633	94147634	chr11:94147634:T:C	rs11822030	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	94147665	94147666	chr11:94147666:C:T	rs72970792	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	94668262	94668263	chr11:94668263:A:G	rs72965879	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	94675192	94675193	chr11:94675193:C:T	rs611262	C	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	94794362	94794363	chr11:94794363:G:A	chr11:94794363:G:A	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr11	94874179	94874180	chr11:94874180:T:C	rs17678217	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.422165645528107	5.815345755679416	TCTAATTAGT
chr11	94874181	94874182	chr11:94874182:G:C	rs61065260	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.422165645528107	7.109988352032546	TCTAATTAGT
chr11	95219878	95219879	chr11:95219879:A:G	rs1054522	A	G	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	95450771	95450772	chr11:95450772:T:C	rs12799680	T	C	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	95587918	95587919	chr11:95587919:A:T	rs7947890	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	6.4154977513127465	TTTAATTAAA
chr11	95852719	95852720	chr11:95852720:C:T	rs139743764	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	8.867637029512398	9.551601409090008	TCTAATTAAG
chr11	95964145	95964146	chr11:95964146:A:G	rs886379245	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	95973373	95973374	chr11:95973374:C:A	rs12221838	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.981982082767747	8.333803548856949	CCTAATTAAA
chr11	96085151	96085152	chr11:96085152:T:C	rs76738058	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr11	96132375	96132376	chr11:96132376:T:C	rs7111263	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	96176731	96176732	chr11:96176732:C:A	rs11021460	C	A	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr11	96706333	96706334	chr11:96706334:C:T	rs17129545	C	T	.	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	96876655	96876656	chr11:96876656:A:G	rs17129665	A	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	97855677	97855678	chr11:97855678:C:T	rs2597595	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr11	98954633	98954634	chr11:98954634:A:G	rs11217779	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	99016041	99016042	chr11:99016042:G:A	rs764346810	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	99016049	99016050	chr11:99016050:T:G	chr11:99016050:T:G	T	G	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	99016905	99016906	chr11:99016906:T:C	rs10892637	T	C	T	Alx1.mouse_homeodomain_1	1	1	+	8.305181923889696	8.723290559459702	CTTAATTAAC
chr11	99019728	99019729	chr11:99019729:A:C	rs11218061	A	C	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	99020097	99020098	chr11:99020098:A:C	rs4754574	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	99505623	99505624	chr11:99505624:C:A	rs61894112	C	A	C	Alx1.mouse_homeodomain_1	9	1	+	8.087347922669274	8.346039445977318	CCTAATTACC
chr11	99538481	99538482	chr11:99538482:T:C	rs10790788	T	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr11	99677239	99677240	chr11:99677240:T:C	rs601742	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	100285493	100285494	chr11:100285494:C:T	rs689284	C	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	100294929	100294930	chr11:100294930:T:G	rs34723066	T	G	T	Alx1.mouse_homeodomain_1	9	1	-	8.346039445977318	8.087347922669274	CCTAATTACA
chr11	100568283	100568284	chr11:100568284:T:C	rs67786711	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	100640094	100640095	chr11:100640095:A:C	rs11224342	A	C	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr11	100731749	100731750	chr11:100731750:C:G	rs10895011	C	G	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	101526591	101526592	chr11:101526592:G:C	rs11224817	G	C	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr11	101542290	101542291	chr11:101542291:G:A	rs7131328	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	101706345	101706346	chr11:101706346:T:C	rs34377172	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr11	101721649	101721650	chr11:101721650:G:C	rs11600201	G	C	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr11	101817615	101817616	chr11:101817616:G:A	rs7949648	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	101915457	101915458	chr11:101915458:G:C	rs949156	G	C	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	102064245	102064246	chr11:102064246:C:G	rs10750627	C	G	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr11	102547632	102547633	chr11:102547633:C:T	rs11225314	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr11	102596559	102596560	chr11:102596560:A:T	rs10895321	A	T	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr11	103205523	103205524	chr11:103205524:G:T	rs650485	G	T	T	Alx1.mouse_homeodomain_1	2	1	-	8.061628744770331	6.82281486899034	TCCAATTACA
chr11	103368477	103368478	chr11:103368478:A:G	rs313373	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	103378457	103378458	chr11:103378458:G:C	rs2408585	G	C	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	103730028	103730029	chr11:103730029:C:T	rs77726130	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.298017703190137	7.879909067620131	CCTAATTAAG
chr11	103906732	103906733	chr11:103906733:T:C	rs189459072	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	104449485	104449486	chr11:104449486:C:T	rs6591081	C	T	c	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	106137824	106137825	chr11:106137825:A:G	rs7944152	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	9.551601409090008	8.867637029512398	TCTAATTAAA
chr11	106353141	106353142	chr11:106353142:A:G	rs7952658	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	107562767	107562768	chr11:107562768:T:A	rs2510452	T	A	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr11	107664670	107664671	chr11:107664671:C:T	rs612205	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr11	107855128	107855129	chr11:107855129:T:A	rs77187192	T	A	t	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	107921686	107921687	chr11:107921687:T:A	rs116217411	T	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	109625111	109625112	chr11:109625112:G:C	rs10789737	G	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr11	110132018	110132019	chr11:110132019:A:G	rs1564013	A	G	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr11	110242348	110242349	chr11:110242349:G:A	rs183458622	G	A	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	110471821	110471822	chr11:110471822:C:G	rs2298511	C	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr11	110473013	110473014	chr11:110473014:A:T	rs145709536	A	T	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	110473014	110473015	chr11:110473015:G:A	rs75381611	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	111064091	111064092	chr11:111064092:G:A	rs17112181	G	A	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	111480458	111480459	chr11:111480459:T:C	rs1944117	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	111562235	111562236	chr11:111562236:G:A	rs149796973	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.061628744770331	7.643520109200326	TCCAATTACA
chr11	112401271	112401272	chr11:112401272:G:A	rs1525407	G	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	112523665	112523666	chr11:112523666:T:C	rs138000778	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.867637029512398	8.298017703190137	TCTAATTAAG
chr11	113253656	113253657	chr11:113253657:G:A	rs10891524	G	A	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	113391443	113391444	chr11:113391444:C:T	rs990794169	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	114144410	114144411	chr11:114144411:C:T	rs115946726	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	114172759	114172760	chr11:114172760:C:T	rs75836508	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr11	114739226	114739227	chr11:114739227:T:A	rs77106532	T	A	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr11	114771900	114771901	chr11:114771901:A:C	rs7113782	A	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr11	114847780	114847781	chr11:114847781:T:C	rs4936306	T	C	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	115334903	115334904	chr11:115334904:A:C	rs10891832	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.874801250211958	4.744388556281495	TTTAATTAAC
chr11	115591083	115591084	chr11:115591084:T:C	rs2446904	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	115691906	115691907	chr11:115691907:A:G	rs1784970	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr11	115906425	115906426	chr11:115906426:G:A	rs71478211	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr11	115906450	115906451	chr11:115906451:C:A	rs61488145	C	A	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	116112367	116112368	chr11:116112368:C:T	rs78343635	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	117011846	117011847	chr11:117011847:C:T	rs73594141	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	117077456	117077457	chr11:117077457:T:A	rs56188860	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	117358175	117358176	chr11:117358176:G:A	rs560789	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr11	117606729	117606730	chr11:117606730:T:C	rs144055933	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	118087463	118087464	chr11:118087464:T:A	rs10892212	T	A	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	118140174	118140175	chr11:118140175:G:C	rs640323	G	C	G	Alx1.mouse_homeodomain_1	9	1	+	8.298017703190137	8.723290559459702	CCTAATTAAG
chr11	119298846	119298847	chr11:119298847:C:G	rs528546144	C	G	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	119470669	119470670	chr11:119470670:C:T	rs11825596	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	119492175	119492176	chr11:119492176:T:C	rs549303	T	C	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr11	119592141	119592142	chr11:119592142:A:G	rs11608077	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	7.846603954486855	2.858882038217874	TGTAATTAGC
chr11	119592166	119592167	chr11:119592167:G:A	rs34211230	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	119781504	119781505	chr11:119781505:G:C	rs5026369	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	119793594	119793595	chr11:119793595:T:G	rs7928437	T	G	T	Alx1.mouse_homeodomain_1	4	1	-	8.723290559459702	3.2615239087385475	CCTAATTAAC
chr11	119888336	119888337	chr11:119888337:T:G	rs61899013	T	G	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr11	120035688	120035689	chr11:120035689:A:T	rs1452840	A	T	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr11	120143755	120143756	chr11:120143756:C:T	rs565302764	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.656967248991535	7.920351646537226	TCTAATTACC
chr11	120248770	120248771	chr11:120248771:C:T	rs115895131	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	120384752	120384753	chr11:120384753:G:C	rs146499499	G	C	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr11	120547731	120547732	chr11:120547732:A:G	rs2252249	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	120547735	120547736	chr11:120547736:C:T	rs11608114	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr11	120925245	120925246	chr11:120925246:A:C	rs117508216	A	C	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	120978007	120978008	chr11:120978008:G:A	rs17124632	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	121110043	121110044	chr11:121110044:T:C	rs538741	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr11	121566701	121566702	chr11:121566702:G:A	rs11218344	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr11	122394493	122394494	chr11:122394494:A:G	rs685419	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	122441436	122441437	chr11:122441437:T:A	rs17126548	T	A	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	122517011	122517012	chr11:122517012:A:C	rs896129	A	C	A	Alx1.mouse_homeodomain_1	5	1	-	7.802937221462287	1.5139579867593276	TCCAATTACC
chr11	122688141	122688142	chr11:122688142:T:C	rs10750219	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr11	122727105	122727106	chr11:122727106:A:G	rs35714343	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	8.17105328609015	2.2441492989300857	CTTAATTAGC
chr11	122746065	122746066	chr11:122746066:G:A	rs151254927	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr11	122746092	122746093	chr11:122746093:G:A	rs17126807	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	122840654	122840655	chr11:122840655:C:T	rs59345946	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	123055495	123055496	chr11:123055496:A:G	rs76535928	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	123308414	123308415	chr11:123308415:C:A	rs9888204	C	A	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	123460023	123460024	chr11:123460024:T:G	rs17127387	T	G	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr11	123460053	123460054	chr11:123460054:G:A	rs7104456	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	123460463	123460464	chr11:123460464:T:C	rs11219148	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	123474788	123474789	chr11:123474789:T:C	rs2714048	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr11	123652605	123652606	chr11:123652606:G:T	rs1617513	G	T	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	123652649	123652650	chr11:123652650:T:A	rs3862614	T	A	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr11	123905710	123905711	chr11:123905711:G:C	rs75684615	G	C	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	123906048	123906049	chr11:123906049:A:G	rs76789350	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	124069708	124069709	chr11:124069709:T:C	rs11219433	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	125111363	125111364	chr11:125111364:A:T	chr11:125111364:A:T	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	125170664	125170665	chr11:125170665:G:A	rs79787595	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	125337817	125337818	chr11:125337818:C:T	rs75485807	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr11	125371149	125371150	chr11:125371150:G:A	rs12273350	G	A	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	125392329	125392330	chr11:125392330:C:T	rs34000158	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr11	125945677	125945678	chr11:125945678:C:G	rs374627315	C	G	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr11	126165401	126165402	chr11:126165402:C:T	rs561828	C	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr11	126466100	126466101	chr11:126466101:A:G	rs117213516	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.8478534449682	3.860131528699219	CCTAATTAGA
chr11	126498536	126498537	chr11:126498537:A:C	rs11823106	A	C	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr11	126519362	126519363	chr11:126519363:G:T	rs659015	G	T	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr11	126519364	126519365	chr11:126519365:T:C	chr11:126519365:T:C	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.305181923889696	8.17105328609015	CTTAATTAAC
chr11	126629014	126629015	chr11:126629015:G:A	rs1294198031	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	126629043	126629044	chr11:126629044:T:G	rs555469482	T	G	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr11	126886679	126886680	chr11:126886680:A:C	rs7932969	A	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	127969450	127969451	chr11:127969451:G:A	rs646409	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	128139044	128139045	chr11:128139045:T:C	rs11221165	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	128206221	128206222	chr11:128206222:G:A	rs7933009	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr11	128206700	128206701	chr11:128206701:G:A	rs9787850	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.879478364183603	7.461369728613598	TCCAATTAGG
chr11	128219039	128219040	chr11:128219040:C:T	rs1793327	C	T	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	128476751	128476752	chr11:128476752:A:G	rs1374431775	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	128709914	128709915	chr11:128709915:T:C	rs1031156976	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	129086906	129086907	chr11:129086907:A:C	rs1784019	A	C	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	129392043	129392044	chr11:129392044:A:G	rs7116042	A	G	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr11	129873116	129873117	chr11:129873117:A:G	rs1650826	A	G	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr11	129955867	129955868	chr11:129955868:G:C	rs60072250	G	C	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	130078993	130078994	chr11:130078994:C:A	rs56942980	C	A	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr11	130489436	130489437	chr11:130489437:T:C	rs12291029	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	130551085	130551086	chr11:130551086:C:A	rs61913956	C	A	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	130625198	130625199	chr11:130625199:T:G	rs7126578	T	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	130694800	130694801	chr11:130694801:T:G	rs112407001	T	G	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	131248742	131248743	chr11:131248743:T:C	rs78558713	T	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr11	131289669	131289670	chr11:131289670:C:A	rs2511786	C	A	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	131421519	131421520	chr11:131421520:A:G	rs1011402	A	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr11	131696041	131696042	chr11:131696042:C:T	rs789529	C	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr11	131817768	131817769	chr11:131817769:G:T	rs6590603	G	T	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	131819780	131819781	chr11:131819781:T:C	rs56127345	T	C	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr11	131902774	131902775	chr11:131902775:T:G	rs541507	T	G	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	132052293	132052294	chr11:132052294:C:G	rs2027781	C	G	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	132122932	132122933	chr11:132122933:A:G	rs10894506	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	132122941	132122942	chr11:132122942:G:A	rs10894507	G	A	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	132327455	132327456	chr11:132327456:A:G	rs2029136	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr11	133085368	133085369	chr11:133085369:G:C	rs116978871	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	133576656	133576657	chr11:133576657:G:A	rs150090173	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	133987582	133987583	chr11:133987583:T:C	rs329685	T	C	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr11	134464679	134464680	chr11:134464680:G:A	rs67206424	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	134575800	134575801	chr11:134575801:A:C	rs78926050	A	C	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr11	134646453	134646454	chr11:134646454:C:T	rs3019661	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr11	134793931	134793932	chr11:134793932:A:G	rs10791392	A	G	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	134808145	134808146	chr11:134808146:T:C	rs117353740	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	9.158781247982416	3.2318772608223525	TCTAATTAGC
chr11	134843699	134843700	chr11:134843700:C:T	rs558551052	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	134843712	134843713	chr11:134843713:C:T	rs750957197	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	83099	83100	chr12:83100:G:C	rs78310373	G	C	.	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	548834	548835	chr12:548835:T:C	rs11063536	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr12	548853	548854	chr12:548854:A:G	rs11063537	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	7.49200941844807	4.594914909111695	CCCAATTACA
chr12	663074	663075	chr12:663075:A:G	rs41518048	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	993142	993143	chr12:993143:T:C	rs184503260	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	1013918	1013919	chr12:1013919:G:A	rs11064640	G	A	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	1080835	1080836	chr12:1080836:T:A	rs2369668	T	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	1395546	1395547	chr12:1395547:T:C	rs11613252	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr12	1924653	1924654	chr12:1924654:C:T	rs115666949	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr12	1999591	1999592	chr12:1999592:G:A	rs6489342	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr12	2017607	2017608	chr12:2017608:C:G	rs2067490	C	G	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	2172758	2172759	chr12:2172759:A:C	rs2370411	A	C	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr12	2247387	2247388	chr12:2247388:T:G	rs79446827	T	G	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	2508489	2508490	chr12:2508490:G:A	rs7299060	G	A	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	3107134	3107135	chr12:3107135:A:C	rs74057543	A	C	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	3120164	3120165	chr12:3120165:A:C	rs10848807	A	C	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	3151342	3151343	chr12:3151343:G:A	rs138955316	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.49200941844807	8.346039445977318	CCCAATTACA
chr12	3640903	3640904	chr12:3640904:T:C	rs4766151	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr12	3640942	3640943	chr12:3640943:A:T	rs11062747	A	T	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	3658553	3658554	chr12:3658554:G:T	rs11614311	G	T	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	3658571	3658572	chr12:3658572:G:A	rs757544419	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	3741882	3741883	chr12:3741883:G:A	rs7307214	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	3868791	3868792	chr12:3868792:T:C	rs10505726	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	7.852546319205846	6.998516291676599	CCTAATTAGT
chr12	3885667	3885668	chr12:3885668:T:C	rs73253331	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	4217107	4217108	chr12:4217108:A:G	rs7970659	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	4448430	4448431	chr12:4448431:C:A	rs2909379	C	A	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr12	4579839	4579840	chr12:4579840:G:C	rs557232216	G	C	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	4630615	4630616	chr12:4630616:A:G	rs2299834	A	G	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr12	5151865	5151866	chr12:5151866:T:C	rs72653451	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	7.49200941844807	1.565105431288007	CCCAATTACA
chr12	5320005	5320006	chr12:5320006:A:G	rs77128055	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	5415395	5415396	chr12:5415396:C:A	rs4238023	C	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	5441171	5441172	chr12:5441172:T:C	rs66497710	T	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	6366956	6366957	chr12:6366957:T:C	rs2886081	T	C	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	6449553	6449554	chr12:6449554:A:T	rs11064198	A	T	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	7642065	7642066	chr12:7642066:C:T	rs67060228	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr12	7927234	7927235	chr12:7927235:C:G	rs114575011	C	G	G	Alx1.mouse_homeodomain_1	9	1	+	7.9549935751004215	7.529720718830856	GCTAATTAAC
chr12	9649701	9649702	chr12:9649702:A:G	rs113327090	A	G	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	9973306	9973307	chr12:9973307:A:T	rs2961543	A	T	-	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	10034022	10034023	chr12:10034023:G:A	rs4764208	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	10096913	10096914	chr12:10096914:G:A	rs10845040	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	10266179	10266180	chr12:10266180:T:G	rs17808267	T	G	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	10771587	10771588	chr12:10771588:G:T	rs10772360	G	T	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	11194306	11194307	chr12:11194307:G:A	rs1669425	G	A	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr12	11194310	11194311	chr12:11194311:C:G	rs1650025	C	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr12	11734267	11734268	chr12:11734268:T:C	rs73288792	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	11840203	11840204	chr12:11840204:C:G	rs2855741	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.867637029512398	7.555459736016837	TCTAATTAAG
chr12	11870088	11870089	chr12:11870089:C:G	rs2071150	C	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr12	12168246	12168247	chr12:12168247:A:C	rs12310020	A	C	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	12474474	12474475	chr12:12474475:C:A	rs736106	C	A	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	12474475	12474476	chr12:12474476:G:A	rs736107	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	12605227	12605228	chr12:12605228:G:T	rs10743991	G	T	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr12	13036359	13036360	chr12:13036360:G:A	rs143698238	G	A	g	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	13043987	13043988	chr12:13043988:C:G	rs4763921	C	G	c	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	13174438	13174439	chr12:13174439:A:G	rs11055263	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr12	13454883	13454884	chr12:13454884:C:G	rs984895	C	G	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr12	14243377	14243378	chr12:14243378:C:A	rs7306933	C	A	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr12	14261438	14261439	chr12:14261439:G:C	rs12422836	G	C	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	14904924	14904925	chr12:14904925:C:T	rs71537693	C	T	c	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr12	15171372	15171373	chr12:15171373:C:G	rs74068748	C	G	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr12	15350470	15350471	chr12:15350471:A:G	rs56195914	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr12	15350473	15350474	chr12:15350474:A:C	rs56017619	A	C	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	15372563	15372564	chr12:15372564:G:A	rs145613014	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr12	15532299	15532300	chr12:15532300:A:G	rs10846192	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	15718650	15718651	chr12:15718651:T:C	rs10466858	T	C	t	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr12	15928374	15928375	chr12:15928375:C:T	rs12310170	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr12	16767002	16767003	chr12:16767003:C:T	rs16912215	C	T	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	18253792	18253793	chr12:18253793:G:A	rs10770336	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr12	18296953	18296954	chr12:18296954:C:G	rs7978843	C	G	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	18296962	18296963	chr12:18296963:T:C	rs11044011	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	18595415	18595416	chr12:18595416:G:T	rs7305694	G	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	18691402	18691403	chr12:18691403:A:G	rs11835639	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.69757138156076	2.770667394400697	TCCAATTAAA
chr12	18752549	18752550	chr12:18752550:T:C	rs547396541	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	18848931	18848932	chr12:18848932:C:G	rs11044325	C	G	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	19191593	19191594	chr12:19191594:T:A	rs4492868	T	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	19235501	19235502	chr12:19235502:T:C	rs4430567	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	19546939	19546940	chr12:19546940:C:T	rs76923519	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	19597829	19597830	chr12:19597830:A:G	rs6416207	A	G	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	19620128	19620129	chr12:19620129:A:G	rs7298832	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	19625997	19625998	chr12:19625998:C:T	rs11044715	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	19718565	19718566	chr12:19718566:A:C	rs17355050	A	C	C	Alx1.mouse_homeodomain_1	7	1	+	8.69757138156076	5.4191254983006605	TCCAATTAAA
chr12	19759327	19759328	chr12:19759328:T:G	rs77295008	T	G	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	19848183	19848184	chr12:19848184:T:G	rs147560004	T	G	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	19945771	19945772	chr12:19945772:G:C	rs10770580	G	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	20056007	20056008	chr12:20056008:C:T	rs551875684	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	20184496	20184497	chr12:20184497:C:T	rs10505863	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	21457001	21457002	chr12:21457002:A:G	rs68030467	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	22834528	22834529	chr12:22834529:A:C	rs2433644	A	C	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	23472699	23472700	chr12:23472700:C:A	rs11046932	C	A	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	23689279	23689280	chr12:23689280:G:C	rs2900524	G	C	C	Alx1.mouse_homeodomain_1	1	1	-	8.867637029512398	7.555459736016837	TCTAATTAAG
chr12	24038896	24038897	chr12:24038897:T:C	rs10771055	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	24153387	24153388	chr12:24153388:A:G	rs71450417	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	25193196	25193197	chr12:25193197:G:T	rs75639553	G	T	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr12	25293235	25293236	chr12:25293236:G:A	rs55855389	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	25348474	25348475	chr12:25348475:G:A	rs77727117	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	25428195	25428196	chr12:25428196:A:C	rs4963616	A	C	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	25501510	25501511	chr12:25501511:A:C	rs16928967	A	C	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr12	25891273	25891274	chr12:25891274:T:C	rs10771245	T	C	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr12	25957676	25957677	chr12:25957677:G:A	rs12424238	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr12	26124486	26124487	chr12:26124487:G:C	rs76786372	G	C	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr12	26434195	26434196	chr12:26434196:A:T	rs12424119	A	T	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	26563904	26563905	chr12:26563905:T:A	rs55861094	T	A	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	26690810	26690811	chr12:26690811:T:C	rs11048655	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.874801250211958	8.74067261241241	TTTAATTAAC
chr12	26727553	26727554	chr12:26727554:G:A	rs73292398	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	26828160	26828161	chr12:26828161:G:A	rs12579861	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	26896397	26896398	chr12:26896398:C:G	rs12425210	C	G	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	27208099	27208100	chr12:27208100:C:A	rs7304468	C	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	27208101	27208102	chr12:27208102:T:A	rs10400461	T	A	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	27521473	27521474	chr12:27521474:G:A	rs115127053	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr12	28313637	28313638	chr12:28313638:A:G	rs7310297	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.656967248991535	3.685287595970793	TCTAATTACC
chr12	29640206	29640207	chr12:29640207:C:T	rs1549411	C	T	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	29898929	29898930	chr12:29898930:T:G	rs77412093	T	G	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	29964971	29964972	chr12:29964972:T:C	rs12581739	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	9.417472771290461	4.429750855021479	TCTAATTAGA
chr12	30015096	30015097	chr12:30015097:T:G	rs10734779	T	G	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	30155320	30155321	chr12:30155321:A:G	rs6487880	A	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	30164137	30164138	chr12:30164138:A:G	rs7297032	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	30191838	30191839	chr12:30191839:A:G	rs1485439	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	30436899	30436900	chr12:30436900:G:A	rs11050904	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr12	30842110	30842111	chr12:30842111:A:G	rs73086339	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	31035401	31035402	chr12:31035402:C:T	rs73082877	C	T	.	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	31047529	31047530	chr12:31047530:A:G	rs35024	A	G	.	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	31073373	31073374	chr12:31073374:G:A	rs28497345	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr12	31523982	31523983	chr12:31523983:T:C	rs73297842	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.723290559459702	3.7355686431907213	CCTAATTAAC
chr12	32127887	32127888	chr12:32127888:T:C	rs10844133	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	32255285	32255286	chr12:32255286:A:C	rs2728801	A	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	32471092	32471093	chr12:32471093:G:A	rs10844210	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr12	32522425	32522426	chr12:32522426:C:T	rs11052042	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	32574838	32574839	chr12:32574839:C:T	rs890808519	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	32664683	32664684	chr12:32664684:C:T	rs66895109	C	T	c	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr12	32754664	32754665	chr12:32754665:G:A	rs17541794	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	32989117	32989118	chr12:32989118:T:C	rs35942647	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr12	39034127	39034128	chr12:39034128:T:G	rs7970834	T	G	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr12	39352519	39352520	chr12:39352520:G:C	rs78898476	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.656967248991535	7.344789955495973	TCTAATTACC
chr12	39782308	39782309	chr12:39782309:A:G	rs4238077	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr12	39782503	39782504	chr12:39782504:A:G	rs11173551	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	40342136	40342137	chr12:40342137:G:A	rs10506155	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.01360700198315	7.595498366413145	TCCAATTAAG
chr12	41368055	41368056	chr12:41368056:C:T	rs17129305	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	41459529	41459530	chr12:41459530:T:A	rs1817270	T	A	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	41477068	41477069	chr12:41477069:A:G	rs2730814	A	G	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	43096113	43096114	chr12:43096114:A:C	rs1167144	A	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	43100116	43100117	chr12:43100117:T:A	rs7311965	T	A	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr12	43113032	43113033	chr12:43113033:C:A	rs541773692	C	A	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	43151921	43151922	chr12:43151922:C:T	rs908154	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.312052953791037	7.893944318221031	TCTAATTATC
chr12	43357353	43357354	chr12:43357354:T:G	rs77828638	T	G	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	43494081	43494082	chr12:43494082:T:C	rs4768500	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	43696868	43696869	chr12:43696869:G:A	rs1478614	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr12	43841441	43841442	chr12:43841442:T:C	rs2199390	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.23885861342153	3.2671789604007873	TTTAATTACC
chr12	43884665	43884666	chr12:43884666:G:A	rs1731423	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	43884685	43884686	chr12:43884686:A:G	rs2407782	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	44093116	44093117	chr12:44093117:C:T	rs75150414	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr12	44563579	44563580	chr12:44563580:G:A	rs7966066	G	A	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr12	44603601	44603602	chr12:44603602:C:A	rs2060895	C	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	44612823	44612824	chr12:44612824:G:A	rs1167978843	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	44930143	44930144	chr12:44930144:C:A	rs113175023	C	A	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr12	45217250	45217251	chr12:45217251:T:C	rs3782131	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	45912505	45912506	chr12:45912506:G:A	rs11183234	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	46117598	46117599	chr12:46117599:C:T	rs12371771	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	46219610	46219611	chr12:46219611:T:C	rs6582623	T	C	C	Alx1.mouse_homeodomain_1	2	1	+	9.551601409090008	8.69757138156076	TCTAATTAAA
chr12	46723237	46723238	chr12:46723238:A:G	rs10785637	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	7.886642584883163	4.9895480755467885	TTCAATTAGC
chr12	47275762	47275763	chr12:47275763:A:G	rs214671	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	47293480	47293481	chr12:47293481:G:T	rs143326130	G	T	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	47378621	47378622	chr12:47378622:C:T	rs552159283	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	47580765	47580766	chr12:47580766:A:G	rs111687147	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	47943380	47943381	chr12:47943381:G:A	rs569791103	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	48002580	48002581	chr12:48002581:G:C	rs1635527	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	48198326	48198327	chr12:48198327:C:T	rs140951346	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	8.8478534449682	8.981982082767747	CCTAATTAGA
chr12	48862374	48862375	chr12:48862375:C:G	rs2446972	C	G	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr12	49174482	49174483	chr12:49174483:C:T	rs11168902	C	T	c	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	49482899	49482900	chr12:49482900:C:T	rs11613509	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	49894248	49894249	chr12:49894249:A:G	rs1027711	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr12	50129107	50129108	chr12:50129108:C:T	rs7314598	C	T	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	50129720	50129721	chr12:50129721:C:T	rs1554845	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	50247173	50247174	chr12:50247174:C:T	rs76521736	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr12	50517210	50517211	chr12:50517211:A:G	rs11169472	A	G	a	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr12	50765356	50765357	chr12:50765357:A:G	rs12424860	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	50776332	50776333	chr12:50776333:T:A	rs7297504	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	51326596	51326597	chr12:51326597:T:C	rs915221074	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	9.292909885781963	3.3660058986218995	TCTAATTAAC
chr12	51944083	51944084	chr12:51944084:T:C	rs772231	T	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr12	52251713	52251714	chr12:52251714:A:G	rs938496406	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr12	52281894	52281895	chr12:52281895:C:T	rs7312403	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	52281895	52281896	chr12:52281896:G:A	rs11170069	G	A	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	52281913	52281914	chr12:52281914:A:C	rs1894034	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	52606381	52606382	chr12:52606382:G:A	rs7979844	G	A	g	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	52870840	52870841	chr12:52870841:A:G	rs114553853	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr12	52901766	52901767	chr12:52901767:T:G	rs2035876	T	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	52976930	52976931	chr12:52976931:C:T	rs1348110620	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr12	53713526	53713527	chr12:53713527:G:A	rs57457705	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr12	53803987	53803988	chr12:53803988:A:G	rs2031055	A	G	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr12	54522873	54522874	chr12:54522874:A:G	rs146123267	A	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	54522874	54522875	chr12:54522875:C:T	rs140107607	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	54601903	54601904	chr12:54601904:A:G	rs142332468	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	54608943	54608944	chr12:54608944:T:C	rs937309	T	C	t	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	54878399	54878400	chr12:54878400:A:C	rs2887909	A	C	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	54955533	54955534	chr12:54955534:G:T	rs72648127	G	T	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	55105304	55105305	chr12:55105305:A:G	rs9805039	A	G	a	Alx1.mouse_homeodomain_1	0	1	-	8.23885861342153	7.669239287099268	TTTAATTACC
chr12	56045424	56045425	chr12:56045425:A:G	rs12580100	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	56100037	56100038	chr12:56100038:A:C	rs2292238	A	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	56646190	56646191	chr12:56646191:C:A	rs181185330	C	A	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr12	56683341	56683342	chr12:56683342:G:A	rs985949306	G	A	g	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	56987890	56987891	chr12:56987891:C:G	rs10506350	C	G	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	57147481	57147482	chr12:57147482:C:T	rs2306692	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	57453108	57453109	chr12:57453109:C:T	chr12:57453109:C:T	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	57453140	57453141	chr12:57453141:C:T	rs181715194	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr12	57710320	57710321	chr12:57710321:C:A	rs10082911	C	A	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr12	57985440	57985441	chr12:57985441:T:C	rs2372378	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	58172140	58172141	chr12:58172141:A:G	rs956092057	A	G	A	Alx1.mouse_homeodomain_1	9	1	-	8.422165645528107	9.158781247982416	TCTAATTAGT
chr12	58491338	58491339	chr12:58491339:T:C	rs12823793	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	58918331	58918332	chr12:58918332:T:C	rs11172823	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	59085323	59085324	chr12:59085324:T:C	rs187339526	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	59168816	59168817	chr12:59168817:T:G	rs10877220	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.91565877229958	5.637212889039478	TCTAATTACA
chr12	59215265	59215266	chr12:59215266:T:A	rs12318105	T	A	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	59431331	59431332	chr12:59431332:G:T	rs436800	G	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	59891344	59891345	chr12:59891345:G:T	rs900859093	G	T	G	Alx1.mouse_homeodomain_1	8	1	+	8.589161921660155	7.742433627468776	CCTAATTAGC
chr12	60310979	60310980	chr12:60310980:G:C	rs3901470	G	C	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	60522830	60522831	chr12:60522831:T:C	rs7131721	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	61386154	61386155	chr12:61386155:C:A	rs11173931	C	A	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	61700778	61700779	chr12:61700779:A:C	rs10877713	A	C	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	62159003	62159004	chr12:62159004:G:T	rs7978888	G	T	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	62217478	62217479	chr12:62217479:A:G	rs10219761	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr12	62855497	62855498	chr12:62855498:G:A	rs10747970	G	A	g	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	63422975	63422976	chr12:63422976:G:A	rs11174965	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	63900495	63900496	chr12:63900496:T:C	rs61933086	T	C	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	63900500	63900501	chr12:63900501:G:A	rs61933087	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	64039951	64039952	chr12:64039952:C:A	rs11175238	C	A	c	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr12	64093905	64093906	chr12:64093906:T:C	rs1565942	T	C	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr12	64323961	64323962	chr12:64323962:T:C	rs1865801	T	C	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	64336617	64336618	chr12:64336618:G:A	rs10878151	G	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	64368617	64368618	chr12:64368618:C:T	rs11175368	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	64368658	64368659	chr12:64368659:T:C	rs10878166	T	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	64594850	64594851	chr12:64594851:G:A	rs11612377	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	64976265	64976266	chr12:64976266:A:G	rs1034673249	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	9.158781247982416	4.171059331713434	TCTAATTAGC
chr12	65120937	65120938	chr12:65120938:G:A	rs2279745	G	A	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr12	65576638	65576639	chr12:65576639:G:C	rs4762101	G	C	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	65642959	65642960	chr12:65642960:C:T	rs4762113	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr12	65730151	65730152	chr12:65730152:C:G	rs2358947	C	G	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	66341640	66341641	chr12:66341641:T:C	rs1183272	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr12	66532329	66532330	chr12:66532330:T:C	rs61928464	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr12	66837519	66837520	chr12:66837520:C:T	rs12309869	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	67359018	67359019	chr12:67359019:A:G	rs78123014	A	G	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	67359052	67359053	chr12:67359053:C:T	rs141841057	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	67362604	67362605	chr12:67362605:G:A	rs775650	G	A	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	67787791	67787792	chr12:67787792:G:T	rs9652025	G	T	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	67957402	67957403	chr12:67957403:G:C	rs11176969	G	C	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	68242151	68242152	chr12:68242152:T:C	rs73136164	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr12	68495123	68495124	chr12:68495124:T:G	rs10784720	T	G	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	68612262	68612263	chr12:68612263:C:T	rs2956529	C	T	T	Alx1.mouse_homeodomain_1	9	1	-	8.23169439272197	8.91565877229958	TCTAATTACG
chr12	68957654	68957655	chr12:68957655:C:T	rs4913302	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	69252229	69252230	chr12:69252230:T:C	rs607797	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	69329785	69329786	chr12:69329786:G:A	rs10878965	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	69331529	69331530	chr12:69331530:C:T	rs77014249	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	69619277	69619278	chr12:69619278:G:C	rs776405	G	C	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr12	70074530	70074531	chr12:70074531:G:A	rs789200	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	70155195	70155196	chr12:70155196:A:G	rs61929317	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	70555233	70555234	chr12:70555234:G:A	rs61758735	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	71565730	71565731	chr12:71565731:A:C	rs1468340462	A	C	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr12	71704337	71704338	chr12:71704338:A:T	rs1880893	A	T	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	71859086	71859087	chr12:71859087:T:C	rs12316953	T	C	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	72308720	72308721	chr12:72308721:G:A	rs4598709	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	72330540	72330541	chr12:72330541:T:G	chr12:72330541:T:G	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.656967248991535	5.378521365731434	TCTAATTACC
chr12	72615545	72615546	chr12:72615546:T:A	rs10431588	T	A	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	72641035	72641036	chr12:72641036:G:A	rs11179298	G	A	a	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	72748276	72748277	chr12:72748277:T:C	rs61933852	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	8.91565877229958	2.9887547851395153	TCTAATTACA
chr12	72950806	72950807	chr12:72950807:T:C	rs10784998	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	74899312	74899313	chr12:74899313:C:T	rs11180273	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	75091582	75091583	chr12:75091583:G:A	rs117128518	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	76208438	76208439	chr12:76208439:G:A	rs17042110	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	76266372	76266373	chr12:76266373:A:C	rs73131576	A	C	a	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	76547122	76547123	chr12:76547123:A:T	rs80145650	A	T	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	77162275	77162276	chr12:77162276:T:C	rs2682805	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	77162387	77162388	chr12:77162388:T:A	rs7303154	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	77190377	77190378	chr12:77190378:T:C	rs76855174	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr12	77549806	77549807	chr12:77549807:C:T	rs12817070	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	77836237	77836238	chr12:77836238:A:G	rs79531370	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	78193881	78193882	chr12:78193882:A:G	rs300504	A	G	a	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	78199676	78199677	chr12:78199677:C:T	rs4761326	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	78584766	78584767	chr12:78584767:G:A	rs11608671	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.69757138156076	8.279462745990756	TCCAATTAAA
chr12	78584782	78584783	chr12:78584783:G:C	rs1717396	G	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	78636584	78636585	chr12:78636585:A:G	rs531477804	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.589161921660155	2.6622579345000914	CCTAATTAGC
chr12	78636604	78636605	chr12:78636605:G:A	rs1043409145	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	78797887	78797888	chr12:78797888:C:T	rs7135993	C	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	78951948	78951949	chr12:78951949:A:G	chr12:78951949:A:G	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	7.940983387749356	5.334163497900666	ACTAATTAGC
chr12	79251254	79251255	chr12:79251255:C:T	rs1245824	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.656967248991535	7.920351646537226	TCTAATTACC
chr12	79351429	79351430	chr12:79351430:G:A	rs17292872	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	79417552	79417553	chr12:79417553:G:A	rs61927383	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	79522667	79522668	chr12:79522668:A:G	rs11114155	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	9.417472771290461	3.490568784130397	TCTAATTAGA
chr12	79983657	79983658	chr12:79983658:G:A	rs7133105	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	80190274	80190275	chr12:80190275:G:C	rs117534551	G	C	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	80425183	80425184	chr12:80425184:G:T	rs10746165	G	T	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	80789091	80789092	chr12:80789092:C:T	rs73358842	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	80858653	80858654	chr12:80858654:T:C	rs7959123	T	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	80868778	80868779	chr12:80868779:A:G	rs7310349	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	81579565	81579566	chr12:81579566:C:T	rs74106663	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.74067261241241	8.004057009958101	TTTAATTAGC
chr12	82054543	82054544	chr12:82054544:T:A	rs10746215	T	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	82209591	82209592	chr12:82209592:A:G	rs12828940	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	83012344	83012345	chr12:83012345:G:C	rs17010336	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.422165645528107	7.109988352032546	TCTAATTAGT
chr12	83324020	83324021	chr12:83324021:T:C	rs73145530	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	83601241	83601242	chr12:83601242:G:A	rs682068	G	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr12	83930094	83930095	chr12:83930095:G:A	rs111401263	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr12	84637990	84637991	chr12:84637991:G:A	rs12821082	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr12	85606735	85606736	chr12:85606736:C:G	rs7962757	C	G	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	85748213	85748214	chr12:85748214:C:T	rs11117019	C	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	86928449	86928450	chr12:86928450:G:A	rs11608654	G	A	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	86928489	86928490	chr12:86928490:G:T	rs17312337	G	T	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	87031047	87031048	chr12:87031048:T:C	rs1897634	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	87383149	87383150	chr12:87383150:G:A	rs56023642	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	87679534	87679535	chr12:87679535:T:C	rs7488133	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	87801151	87801152	chr12:87801152:C:T	rs1436178	C	T	.	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	88036174	88036175	chr12:88036175:T:G	rs77665600	T	G	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	88761318	88761319	chr12:88761319:G:A	rs7305945	G	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	89393678	89393679	chr12:89393679:C:T	rs113648049	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr12	89454409	89454410	chr12:89454410:G:A	rs12581323	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.852546319205846	7.986674957005393	CCTAATTAGT
chr12	89497588	89497589	chr12:89497589:G:A	rs11105302	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	89873229	89873230	chr12:89873230:G:A	rs2553108	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	89943224	89943225	chr12:89943225:T:C	rs11105470	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	89943229	89943230	chr12:89943230:A:C	rs4842696	A	C	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	90306161	90306162	chr12:90306162:A:T	rs825981	A	T	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	90515656	90515657	chr12:90515657:A:G	rs142478330	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr12	90833371	90833372	chr12:90833372:G:A	rs1847453	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	91098815	91098816	chr12:91098816:T:A	rs12823706	T	A	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr12	91328536	91328537	chr12:91328537:G:A	rs1492920	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	91343297	91343298	chr12:91343298:G:A	rs117648458	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	91539245	91539246	chr12:91539246:C:T	rs10859165	C	T	c	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr12	92473552	92473553	chr12:92473553:T:C	rs11106569	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	92526441	92526442	chr12:92526442:C:T	rs10492341	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	92538490	92538491	chr12:92538491:A:G	rs10859336	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.874801250211958	3.903121597191216	TTTAATTAAC
chr12	92603446	92603447	chr12:92603447:G:A	rs145496878	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	92621988	92621989	chr12:92621989:T:C	rs10777418	T	C	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr12	93054820	93054821	chr12:93054821:G:A	rs67583561	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	93351096	93351097	chr12:93351097:T:C	rs6538411	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr12	93416003	93416004	chr12:93416004:A:G	rs7303325	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr12	93416016	93416017	chr12:93416017:T:C	rs17021218	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr12	93503264	93503265	chr12:93503265:A:G	chr12:93503265:A:G	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	93577688	93577689	chr12:93577689:T:G	rs74774845	T	G	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr12	93594506	93594507	chr12:93594507:G:C	rs11107124	G	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	93838200	93838201	chr12:93838201:T:C	rs7314748	T	C	T	Alx1.mouse_homeodomain_1	9	1	+	8.422165645528107	9.158781247982416	TCTAATTAGT
chr12	93855514	93855515	chr12:93855515:G:A	rs7961970	G	A	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	93879676	93879677	chr12:93879677:T:A	rs11107231	T	A	T	Alx1.mouse_homeodomain_1	1	1	+	8.305181923889696	7.129978633291917	CTTAATTAAC
chr12	93879682	93879683	chr12:93879683:A:G	rs11107232	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.305181923889696	2.3782779367296327	CTTAATTAAC
chr12	93957921	93957922	chr12:93957922:C:T	rs7303979	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	93974134	93974135	chr12:93974135:T:G	rs156159	T	G	g	Alx1.mouse_homeodomain_1	0	1	+	8.312052953791037	6.974136643109494	TCTAATTATC
chr12	93974157	93974158	chr12:93974158:T:C	rs117904670	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	94266201	94266202	chr12:94266202:G:A	rs370166318	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	94532864	94532865	chr12:94532865:A:G	rs554663466	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	3.022143764418211	CCCAATTAGA
chr12	94542122	94542123	chr12:94542123:C:T	rs4592484	C	T	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	94542123	94542124	chr12:94542124:A:G	rs4502040	A	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	94872102	94872103	chr12:94872103:A:G	rs61935448	A	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	95181533	95181534	chr12:95181534:C:T	chr12:95181534:C:T	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	95230799	95230800	chr12:95230800:G:A	rs10859855	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	95763363	95763364	chr12:95763364:G:A	rs7302432	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	96112697	96112698	chr12:96112698:T:C	rs2660855	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr12	96127322	96127323	chr12:96127323:T:G	rs17025212	T	G	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	96150519	96150520	chr12:96150520:C:T	rs137953704	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr12	96534963	96534964	chr12:96534964:G:A	rs183071169	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	97005249	97005250	chr12:97005250:G:A	rs78626884	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr12	97112563	97112564	chr12:97112564:T:C	rs147082470	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.312052953791037	7.458022926261789	TCTAATTATC
chr12	97112578	97112579	chr12:97112579:G:A	rs7979001	G	A	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	97288574	97288575	chr12:97288575:A:G	rs79240724	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr12	97299500	97299501	chr12:97299501:A:G	rs10777847	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	97398911	97398912	chr12:97398912:C:T	rs10860202	C	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	98425887	98425888	chr12:98425888:G:A	rs7978994	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr12	98910550	98910551	chr12:98910551:T:A	rs1477236	T	A	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr12	100576628	100576629	chr12:100576629:C:T	rs35715	C	T	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	101646568	101646569	chr12:101646569:G:A	rs11611585	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	101855058	101855059	chr12:101855059:A:G	rs7138845	A	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	101909283	101909284	chr12:101909284:A:G	rs61936577	A	G	a	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	101909307	101909308	chr12:101909308:A:G	rs6539019	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	9.417472771290461	4.445793118269719	TCTAATTAGA
chr12	102814891	102814892	chr12:102814892:G:A	rs75517211	G	A	g	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	103284125	103284126	chr12:103284126:T:C	chr12:103284126:T:C	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.16388906539059	3.176167149121609	CCTAATTAGG
chr12	103850655	103850656	chr12:103850656:C:T	rs1370413	C	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	104110809	104110810	chr12:104110810:G:A	rs11111898	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	104256649	104256650	chr12:104256650:A:C	rs118016094	A	C	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr12	104286882	104286883	chr12:104286883:G:T	rs10735393	G	T	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	104426957	104426958	chr12:104426958:A:T	rs2178670	A	T	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr12	104426971	104426972	chr12:104426972:A:T	rs114818057	A	T	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	104598436	104598437	chr12:104598437:A:T	rs10861249	A	T	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr12	104609227	104609228	chr12:104609228:T:G	rs10778343	T	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr12	105237879	105237880	chr12:105237880:A:G	rs1196788	A	G	a	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	105271381	105271382	chr12:105271382:C:T	rs7955555	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	105562472	105562473	chr12:105562473:G:A	rs7300128	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	105596959	105596960	chr12:105596960:T:C	rs2374514	T	C	t	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	105706777	105706778	chr12:105706778:G:A	rs58708570	G	A	g	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	105717285	105717286	chr12:105717286:T:C	rs61940060	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	105898483	105898484	chr12:105898484:G:T	rs35669307	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	8.91565877229958	TCTAATTACC
chr12	106078800	106078801	chr12:106078801:G:A	rs117844060	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.9549935751004215	7.536884939530416	GCTAATTAAC
chr12	106506979	106506980	chr12:106506980:G:A	rs3851635	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	106649524	106649525	chr12:106649525:C:T	rs10861642	C	T	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	106721794	106721795	chr12:106721795:A:G	rs77271140	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	107214908	107214909	chr12:107214909:C:T	rs79266154	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr12	107325417	107325418	chr12:107325418:G:A	rs7298796	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	107325419	107325420	chr12:107325420:G:A	rs7298797	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	107389089	107389090	chr12:107389090:A:G	rs11113300	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	7.233317895140026	2.2455959788710453	CCCAATTACC
chr12	107610043	107610044	chr12:107610044:C:T	rs760415369	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr12	107749667	107749668	chr12:107749668:G:A	rs56332415	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	107765413	107765414	chr12:107765414:C:T	rs35864914	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	108044944	108044945	chr12:108044945:A:G	rs957843	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.16388906539059	3.192209412369848	CCTAATTAGG
chr12	108215696	108215697	chr12:108215697:G:C	rs1544885	G	C	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	108272114	108272115	chr12:108272115:G:A	rs151328906	G	A	g	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	108303556	108303557	chr12:108303557:C:T	rs11113809	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	108392402	108392403	chr12:108392403:A:G	rs75510106	A	G	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr12	108485772	108485773	chr12:108485773:C:T	rs10746124	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	108558037	108558038	chr12:108558038:G:T	rs6539441	G	T	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	108603370	108603371	chr12:108603371:T:C	rs34940282	T	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	108752661	108752662	chr12:108752662:A:C	rs73408626	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	108833810	108833811	chr12:108833811:A:G	rs79733689	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	108833834	108833835	chr12:108833835:G:A	rs76123001	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	109168190	109168191	chr12:109168191:T:C	rs34286	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr12	110301441	110301442	chr12:110301442:A:C	rs939521509	A	C	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	110357402	110357403	chr12:110357403:A:T	rs73206859	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	110430366	110430367	chr12:110430367:G:A	rs143015142	G	A	g	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	110887632	110887633	chr12:110887633:T:A	rs10849914	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	111057713	111057714	chr12:111057714:A:G	rs10849925	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	111664829	111664830	chr12:111664830:G:A	rs75694333	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	111685364	111685365	chr12:111685365:G:C	rs58580157	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr12	112759509	112759510	chr12:112759510:T:C	rs10492021	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	113582612	113582613	chr12:113582613:G:A	rs147510965	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	113697966	113697967	chr12:113697967:C:T	rs111329535	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	113697993	113697994	chr12:113697994:C:T	rs10774711	C	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	113853943	113853944	chr12:113853944:C:G	rs6489924	C	G	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	114433083	114433084	chr12:114433084:T:C	rs2551382	T	C	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	114443600	114443601	chr12:114443601:A:G	rs1248034	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr12	114664676	114664677	chr12:114664677:A:C	rs11609105	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	115486287	115486288	chr12:115486288:C:T	rs4767325	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr12	115486316	115486317	chr12:115486317:T:A	rs73206280	T	A	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	115749299	115749300	chr12:115749300:A:G	rs148481539	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	116217690	116217691	chr12:116217691:T:C	rs61935854	T	C	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	116237025	116237026	chr12:116237026:G:C	rs17498893	G	C	G	Alx1.mouse_homeodomain_1	8	1	+	7.879478364183603	7.377664365192722	TCCAATTAGG
chr12	116237029	116237030	chr12:116237030:C:T	rs77327858	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr12	116370996	116370997	chr12:116370997:G:A	rs193047514	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	116376895	116376896	chr12:116376896:T:C	rs11831128	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	116513105	116513106	chr12:116513106:G:A	rs11614628	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr12	116521238	116521239	chr12:116521239:T:C	rs956672298	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	9.133492773520002	6.236398264183626	TTTAATTAAA
chr12	116631676	116631677	chr12:116631677:G:A	rs115362351	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr12	116631679	116631680	chr12:116631680:T:C	rs114477117	T	C	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr12	117294533	117294534	chr12:117294534:A:G	rs532967	A	G	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	117680318	117680319	chr12:117680319:A:G	rs7960466	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.449528393942392	TTTAATTAAA
chr12	117739051	117739052	chr12:117739052:A:T	rs675796	A	T	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr12	117739075	117739076	chr12:117739076:A:C	rs541259	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	7.802937221462287	6.465020910780744	TCCAATTACC
chr12	117926438	117926439	chr12:117926439:C:T	rs60703208	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	118370960	118370961	chr12:118370961:A:G	rs519480	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	118774476	118774477	chr12:118774477:C:T	rs569932093	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr12	119181969	119181970	chr12:119181970:G:T	rs75265571	G	T	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	119387098	119387099	chr12:119387099:C:G	rs142548905	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	119500325	119500326	chr12:119500326:A:G	rs474748	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	119664447	119664448	chr12:119664448:T:C	rs1978108	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	119668570	119668571	chr12:119668571:G:T	rs6490267	G	T	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	119775280	119775281	chr12:119775281:A:T	rs203362	A	T	a	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	120060089	120060090	chr12:120060090:T:G	rs76353928	T	G	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr12	120291823	120291824	chr12:120291824:T:G	rs1005382642	T	G	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	120293156	120293157	chr12:120293157:G:A	rs76386952	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	120293157	120293158	chr12:120293158:T:G	rs1022084755	T	G	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	120293163	120293164	chr12:120293164:G:T	rs528668567	G	T	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	120293176	120293177	chr12:120293177:T:C	rs376689821	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	7.886642584883163	2.8989206686141826	TTCAATTAGC
chr12	120293188	120293189	chr12:120293189:G:A	rs752181116	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	120293195	120293196	chr12:120293196:G:A	rs559518446	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	120293196	120293197	chr12:120293197:G:A	rs568959246	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr12	120293199	120293200	chr12:120293200:A:G	rs3847969	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr12	120293200	120293201	chr12:120293201:G:A	rs540082379	G	A	g	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr12	120293200	120293201	chr12:120293201:G:C	chr12:120293201:G:C	G	C	g	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr12	120496771	120496772	chr12:120496772:T:C	rs1268652505	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr12	120498053	120498054	chr12:120498054:T:G	rs188270446	T	G	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	120600476	120600477	chr12:120600477:A:C	rs10774561	A	C	A	Alx1.mouse_homeodomain_1	4	1	+	8.23885861342153	2.777091962700374	TTTAATTACC
chr12	120930714	120930715	chr12:120930715:A:T	rs3999421	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	6.4154977513127465	TTTAATTAAA
chr12	121601225	121601226	chr12:121601226:C:T	rs189485905	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	8.23169439272197	7.886780097521472	TCTAATTACG
chr12	121721130	121721131	chr12:121721131:A:G	rs2720027	A	G	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	121978760	121978761	chr12:121978761:A:G	rs34159444	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.01360700198315	3.0258850857141697	TCCAATTAAG
chr12	122336208	122336209	chr12:122336209:C:A	rs542925604	C	A	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	122336210	122336211	chr12:122336211:C:T	rs147809017	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	122418600	122418601	chr12:122418601:T:A	rs4758664	T	A	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	122459367	122459368	chr12:122459368:A:C	rs4758644	A	C	a	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr12	122759139	122759140	chr12:122759140:G:A	rs2649902	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr12	122827433	122827434	chr12:122827434:C:T	rs1696326	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr12	123094614	123094615	chr12:123094615:C:T	rs60235187	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	123272774	123272775	chr12:123272775:T:A	rs80029182	T	A	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	123795773	123795774	chr12:123795774:C:A	rs1114629	C	A	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr12	124236823	124236824	chr12:124236824:C:G	rs117139763	C	G	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	124236824	124236825	chr12:124236825:C:T	rs11057532	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	124388040	124388041	chr12:124388041:T:C	rs2660369	T	C	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr12	124646597	124646598	chr12:124646598:G:A	rs887117882	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	124659003	124659004	chr12:124659004:C:T	rs71458863	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.1279520552385	8.981982082767747	CCCAATTAAA
chr12	124661108	124661109	chr12:124661109:A:C	rs11057733	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	8.874801250211958	8.23885861342153	TTTAATTAAC
chr12	124746052	124746053	chr12:124746053:T:C	rs145578666	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.233317895140026	2.2616382421192847	CCCAATTACC
chr12	124746076	124746077	chr12:124746077:C:G	rs148477267	C	G	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	125486820	125486821	chr12:125486821:G:A	rs4765043	G	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	126782277	126782278	chr12:126782278:T:A	rs1533165	T	A	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	127590936	127590937	chr12:127590937:G:A	rs2013160	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr12	127771675	127771676	chr12:127771676:A:G	rs75767392	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	9.551601409090008	6.9447815192413165	TCTAATTAAA
chr12	128017352	128017353	chr12:128017353:C:T	rs7980665	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	128037804	128037805	chr12:128037805:C:A	rs11616185	C	A	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr12	128263698	128263699	chr12:128263699:C:G	rs1201540	C	G	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr12	128314307	128314308	chr12:128314308:A:G	rs74322326	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr12	128392020	128392021	chr12:128392021:G:C	rs78429827	G	C	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	128605995	128605996	chr12:128605996:G:A	rs113018682	G	A	g	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	128779903	128779904	chr12:128779904:G:A	rs1552337	G	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	129483773	129483774	chr12:129483774:T:G	rs1021433	T	G	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr12	129720174	129720175	chr12:129720175:T:C	rs7977471	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.846603954486855	2.8749243014661134	TGTAATTAGC
chr12	129839074	129839075	chr12:129839075:C:T	rs7307609	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	7.735131894130908	8.589161921660155	CCCAATTAGC
chr12	129906299	129906300	chr12:129906300:G:A	rs12581136	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.23885861342153	7.50224301096722	TTTAATTACC
chr12	130714075	130714076	chr12:130714076:G:C	rs565209057	G	C	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	130717366	130717367	chr12:130717367:A:G	rs2632662	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	130717414	130717415	chr12:130717415:T:A	rs2695861	T	A	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr12	131143543	131143544	chr12:131143544:T:C	rs7301516	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr12	131461073	131461074	chr12:131461074:G:A	rs75139840	G	A	g	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr12	131541597	131541598	chr12:131541598:C:T	rs10744526	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr12	132186891	132186892	chr12:132186892:G:T	rs11246973	G	T	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr12	132276802	132276803	chr12:132276803:G:A	rs78170500	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr12	132306911	132306912	chr12:132306912:G:A	rs28490534	G	A	A	Alx1.mouse_homeodomain_1	9	1	+	8.23169439272197	8.91565877229958	TCTAATTACG
chr12	132866236	132866237	chr12:132866237:C:T	rs118158105	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr12	133044007	133044008	chr12:133044008:C:T	rs992030552	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	133236885	133236886	chr12:133236886:G:C	rs148437181	G	C	.	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr13	18921327	18921328	chr13:18921328:G:A	rs4770407	G	A	.	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr13	18921360	18921361	chr13:18921361:A:G	rs10161975	A	G	.	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	19768360	19768361	chr13:19768361:G:A	rs75481727	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	20422085	20422086	chr13:20422086:C:T	rs9506485	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	21549536	21549537	chr13:21549537:A:G	rs4770172	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr13	21585137	21585138	chr13:21585138:A:G	rs2488803	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	22010668	22010669	chr13:22010669:C:T	rs3117984	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.346039445977318	8.91565877229958	CCTAATTACA
chr13	22278598	22278599	chr13:22278599:A:G	rs112095851	A	G	a	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	22846974	22846975	chr13:22846975:G:A	rs61958760	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	22967199	22967200	chr13:22967200:C:G	rs17346714	C	G	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr13	22968214	22968215	chr13:22968215:T:C	rs73161071	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	23134177	23134178	chr13:23134178:C:T	rs9510590	C	T	c	Alx1.mouse_homeodomain_1	8	1	-	7.993823417438953	8.1279520552385	CCCAATTAGA
chr13	23215473	23215474	chr13:23215474:C:T	rs79778483	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr13	23623202	23623203	chr13:23623203:A:G	rs146077085	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	23984095	23984096	chr13:23984096:G:T	rs17426978	G	T	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	24063632	24063633	chr13:24063633:T:C	rs10219806	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	24177865	24177866	chr13:24177866:A:T	rs9511111	A	T	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr13	24215670	24215671	chr13:24215671:G:A	rs1220605	G	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	24219350	24219351	chr13:24219351:G:A	rs2068034	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	25159877	25159878	chr13:25159878:T:G	rs9511675	T	G	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr13	25608634	25608635	chr13:25608635:A:G	rs68126613	A	G	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr13	25616965	25616966	chr13:25616966:A:T	rs9943900	A	T	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr13	26048945	26048946	chr13:26048946:C:T	rs79283324	C	T	T	Alx1.mouse_homeodomain_1	0	1	+	8.346039445977318	8.91565877229958	CCTAATTACA
chr13	26062085	26062086	chr13:26062086:G:A	rs115922252	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr13	26258208	26258209	chr13:26258209:A:G	rs9553777	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	26757784	26757785	chr13:26757785:A:G	rs9512372	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	26816856	26816857	chr13:26816857:C:T	rs17084693	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	26941693	26941694	chr13:26941694:C:T	rs12583187	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	26978194	26978195	chr13:26978195:T:C	rs2094517	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr13	27626853	27626854	chr13:27626854:A:G	rs139083859	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	27697004	27697005	chr13:27697005:C:T	rs12876749	C	T	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr13	27838887	27838888	chr13:27838888:C:T	rs74692396	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr13	27902480	27902481	chr13:27902481:T:C	rs9319397	T	C	c	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr13	28079598	28079599	chr13:28079599:A:G	rs9554242	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr13	28141790	28141791	chr13:28141791:A:T	rs9579164	A	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr13	28719530	28719531	chr13:28719531:A:C	chr13:28719531:A:C	A	C	a	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	28794472	28794473	chr13:28794473:G:A	rs76125167	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	29292445	29292446	chr13:29292446:C:T	rs35319210	C	T	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr13	29326057	29326058	chr13:29326058:G:A	rs9508354	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.233317895140026	6.81520925957002	CCCAATTACC
chr13	29356347	29356348	chr13:29356348:C:T	rs77305196	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr13	29749692	29749693	chr13:29749693:A:T	rs9506225	A	T	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	29806269	29806270	chr13:29806270:T:C	rs9508556	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	30144416	30144417	chr13:30144417:A:G	rs4769810	A	G	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr13	30457575	30457576	chr13:30457576:C:A	rs4369508	C	A	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr13	30737958	30737959	chr13:30737959:A:T	rs10507391	A	T	A	Alx1.mouse_homeodomain_1	4	1	+	9.292909885781963	4.218141339044058	TCTAATTAAC
chr13	31004510	31004511	chr13:31004511:T:C	rs60270107	T	C	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	31037083	31037084	chr13:31037084:C:T	rs9535240	C	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	31089193	31089194	chr13:31089194:G:A	rs9597022	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	31416364	31416365	chr13:31416365:C:T	rs187059964	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	31416381	31416382	chr13:31416382:A:G	rs11841788	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.869260531930455	2.8975808789097135	CCCAATTAAC
chr13	31606286	31606287	chr13:31606287:T:C	rs10162262	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr13	31674356	31674357	chr13:31674357:A:G	rs1327985	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	31967141	31967142	chr13:31967142:A:T	rs463969	A	T	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr13	32391172	32391173	chr13:32391173:G:A	rs206340	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	32495050	32495051	chr13:32495051:C:T	rs9315167	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.304751220453168	9.158781247982416	TCCAATTAGC
chr13	32720403	32720404	chr13:32720404:C:T	rs56291634	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr13	32948202	32948203	chr13:32948203:T:G	rs57358169	T	G	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	32976887	32976888	chr13:32976888:A:G	rs428679	A	G	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	33018388	33018389	chr13:33018389:G:C	rs425686	G	C	g	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr13	33775621	33775622	chr13:33775622:T:C	rs73167934	T	C	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr13	33784108	33784109	chr13:33784109:T:A	rs2147667	T	A	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	33784110	33784111	chr13:33784111:T:C	rs2147666	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr13	33843455	33843456	chr13:33843456:G:T	rs9528212	G	T	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr13	34230509	34230510	chr13:34230510:C:T	rs9540176	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	34477085	34477086	chr13:34477086:A:G	rs12429727	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	34823708	34823709	chr13:34823709:T:C	rs9564716	T	C	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr13	35354431	35354432	chr13:35354432:G:A	rs117615202	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	35500247	35500248	chr13:35500248:C:T	rs143383810	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	35594364	35594365	chr13:35594365:C:T	rs150804124	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr13	35718023	35718024	chr13:35718024:A:G	rs9530929	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	36134342	36134343	chr13:36134343:G:A	rs1360012	G	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	36897116	36897117	chr13:36897117:G:C	rs604279	G	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	37482181	37482182	chr13:37482182:A:G	rs12874878	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	38202911	38202912	chr13:38202912:T:G	rs2460317	T	G	G	Alx1.mouse_homeodomain_1	8	1	-	7.9549935751004215	7.319050938309992	GCTAATTAAC
chr13	39186225	39186226	chr13:39186226:A:G	rs547408222	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	39604284	39604285	chr13:39604285:G:A	rs75049406	G	A	g	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr13	39655447	39655448	chr13:39655448:C:T	rs9548868	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	39958455	39958456	chr13:39958456:G:A	rs77837523	G	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	40124150	40124151	chr13:40124151:A:G	rs11840992	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	7.802937221462287	4.905842712125912	TCCAATTACC
chr13	40131287	40131288	chr13:40131288:C:A	rs9549071	C	A	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	40221518	40221519	chr13:40221519:G:A	rs10161901	G	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	40284034	40284035	chr13:40284035:T:C	rs6563813	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr13	40352664	40352665	chr13:40352665:C:T	rs143376775	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr13	40928977	40928978	chr13:40928978:A:T	rs4454835	A	T	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr13	41036210	41036211	chr13:41036211:C:T	rs61962750	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	41411339	41411340	chr13:41411340:T:C	rs4307852	T	C	.	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	41652486	41652487	chr13:41652487:A:T	rs9562329	A	T	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr13	42277363	42277364	chr13:42277364:A:G	rs140170565	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	43237873	43237874	chr13:43237874:C:T	rs146059747	C	T	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr13	43730321	43730322	chr13:43730322:A:C	rs9525830	A	C	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr13	43763432	43763433	chr13:43763433:G:T	rs7321106	G	T	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr13	44332691	44332692	chr13:44332692:G:C	rs181515297	G	C	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr13	44332696	44332697	chr13:44332697:C:T	rs9533823	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr13	44680972	44680973	chr13:44680973:T:C	rs73468244	T	C	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	44765056	44765057	chr13:44765057:G:C	rs571216434	G	C	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	45190023	45190024	chr13:45190024:C:T	rs7984838	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr13	45490208	45490209	chr13:45490209:G:A	rs146737494	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.061628744770331	7.716714449569833	TCCAATTACA
chr13	45524592	45524593	chr13:45524593:T:C	rs35485445	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.91565877229958	6.018564262963203	TCTAATTACA
chr13	45852628	45852629	chr13:45852629:C:T	rs2404599	C	T	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr13	47017595	47017596	chr13:47017596:G:A	rs11617570	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr13	47154288	47154289	chr13:47154289:G:T	rs187055071	G	T	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr13	47799167	47799168	chr13:47799168:A:C	rs547876178	A	C	a	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr13	48561562	48561563	chr13:48561563:G:T	rs578094287	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	49110343	49110344	chr13:49110344:A:G	chr13:49110344:A:G	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr13	49184008	49184009	chr13:49184009:A:G	rs35018425	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr13	49309101	49309102	chr13:49309102:G:C	rs184102238	G	C	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr13	49682115	49682116	chr13:49682116:C:T	rs61959933	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr13	50232986	50232987	chr13:50232987:C:G	rs2765767	C	G	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	51357016	51357017	chr13:51357017:G:A	rs10454626	G	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	51503856	51503857	chr13:51503857:A:G	rs9535699	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	53373596	53373597	chr13:53373597:C:T	rs2587366	C	T	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	53405791	53405792	chr13:53405792:G:A	rs115847515	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr13	55052305	55052306	chr13:55052306:C:T	rs8002628	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.01360700198315	8.867637029512398	TCCAATTAAG
chr13	55268286	55268287	chr13:55268287:G:T	rs118087266	G	T	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	55414058	55414059	chr13:55414059:T:C	rs189660258	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.346039445977318	7.49200941844807	CCTAATTACA
chr13	55414083	55414084	chr13:55414084:C:G	rs3105026	C	G	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr13	55414122	55414123	chr13:55414123:A:G	rs3124374	A	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	57889454	57889455	chr13:57889455:C:T	rs117552520	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	58255191	58255192	chr13:58255192:T:C	rs9537985	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	58842104	58842105	chr13:58842105:C:A	rs9538229	C	A	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr13	59345882	59345883	chr13:59345883:A:T	rs9597991	A	T	a	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	59364623	59364624	chr13:59364624:C:A	rs1409255	C	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	61557823	61557824	chr13:61557824:A:C	rs9539217	A	C	C	Alx1.mouse_homeodomain_1	8	1	+	8.723290559459702	8.087347922669274	CCTAATTAAC
chr13	61775522	61775523	chr13:61775523:C:T	rs9528396	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr13	62175337	62175338	chr13:62175338:A:T	rs308616	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	8.438879858252715	5.207102910923454	TCCAATTAAC
chr13	62485575	62485576	chr13:62485576:A:G	rs310966	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	62813321	62813322	chr13:62813322:T:C	rs75299244	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	63029310	63029311	chr13:63029311:C:T	rs73501585	C	T	c	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	63587228	63587229	chr13:63587229:T:G	rs982583	T	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr13	63643748	63643749	chr13:63643749:G:T	rs17088658	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr13	64239489	64239490	chr13:64239490:G:T	rs1354167380	G	T	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	64390069	64390070	chr13:64390070:G:A	rs965730	G	A	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr13	64991799	64991800	chr13:64991800:A:G	rs12429635	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr13	65404690	65404691	chr13:65404691:G:A	rs7983613	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr13	65595504	65595505	chr13:65595505:A:G	rs1537362	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	66723960	66723961	chr13:66723961:T:C	rs77623520	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.01360700198315	5.40678711213446	TCCAATTAAG
chr13	67001597	67001598	chr13:67001598:G:T	rs9540966	G	T	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	67299831	67299832	chr13:67299832:C:T	rs2991387	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.874801250211958	8.138185647757648	TTTAATTAAC
chr13	69734100	69734101	chr13:69734101:T:C	rs79590717	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	70080381	70080382	chr13:70080382:G:A	rs73214642	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	70946108	70946109	chr13:70946109:G:T	rs803789	G	T	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	73482353	73482354	chr13:73482354:C:T	rs12869212	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr13	73626229	73626230	chr13:73626230:A:G	rs73228233	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	73757915	73757916	chr13:73757916:A:C	rs7336405	A	C	A	Alx1.mouse_homeodomain_1	5	1	-	8.874801250211958	2.5858220155089984	TTTAATTAAC
chr13	74251790	74251791	chr13:74251791:T:C	rs34708830	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr13	74518212	74518213	chr13:74518213:C:T	rs1326713	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	75102429	75102430	chr13:75102430:A:T	rs150939040	A	T	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	75186254	75186255	chr13:75186255:T:C	rs9318325	T	C	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr13	75330705	75330706	chr13:75330706:A:G	rs7991659	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	75459076	75459077	chr13:75459077:C:T	rs78743984	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	75459086	75459087	chr13:75459087:C:T	rs142478806	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr13	75545056	75545057	chr13:75545057:C:T	rs117823879	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.662075066399709	7.317160771199211	CCTAATTACG
chr13	75629710	75629711	chr13:75629711:G:A	rs12427755	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	76048666	76048667	chr13:76048667:G:A	rs140439266	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	76473258	76473259	chr13:76473259:A:T	rs118131566	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	76632088	76632089	chr13:76632089:T:A	rs4142424	T	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	76762800	76762801	chr13:76762801:G:A	rs17250584	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	77327474	77327475	chr13:77327475:T:G	rs12861817	T	G	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	77825559	77825560	chr13:77825560:T:C	rs9565369	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	77886340	77886341	chr13:77886341:G:T	rs1924924	G	T	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	78265110	78265111	chr13:78265111:G:A	rs9601021	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr13	78460355	78460356	chr13:78460356:C:G	rs9318559	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr13	78771773	78771774	chr13:78771774:G:A	rs12868713	G	A	g	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr13	79157296	79157297	chr13:79157297:G:A	rs140547900	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	79410875	79410876	chr13:79410876:T:C	rs8001622	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	79622055	79622056	chr13:79622056:A:G	rs4885646	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr13	80563463	80563464	chr13:80563464:C:T	rs7325704	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	81182291	81182292	chr13:81182292:A:C	rs1333420	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	81224286	81224287	chr13:81224287:T:C	rs9574791	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	8.279462745990756	TTTAATTAAA
chr13	81442689	81442690	chr13:81442690:A:G	rs1984107	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.589161921660155	2.6622579345000914	CCTAATTAGC
chr13	82872585	82872586	chr13:82872586:G:C	rs1586474	G	C	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr13	83294798	83294799	chr13:83294799:A:G	rs7333065	A	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	83532144	83532145	chr13:83532145:T:G	rs34739012	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	83716018	83716019	chr13:83716019:C:A	rs9546492	C	A	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	83950654	83950655	chr13:83950655:C:T	rs9319005	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	84411937	84411938	chr13:84411938:C:A	rs10871180	C	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr13	85619397	85619398	chr13:85619398:T:G	rs73542494	T	G	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr13	85724898	85724899	chr13:85724899:T:G	rs1538068	T	G	t	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	85724926	85724927	chr13:85724927:G:T	rs114469898	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr13	86408230	86408231	chr13:86408231:C:A	rs7328224	C	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	88125513	88125514	chr13:88125514:T:C	rs7982798	T	C	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	88218489	88218490	chr13:88218490:A:G	rs9514444	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr13	88656900	88656901	chr13:88656901:G:T	rs7993257	G	T	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr13	89747133	89747134	chr13:89747134:A:G	rs9515615	A	G	G	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.449528393942392	TTTAATTAAA
chr13	90259998	90259999	chr13:90259999:G:T	rs532341871	G	T	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr13	90834116	90834117	chr13:90834117:A:G	rs1335568	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	7.879478364183603	5.272658474334913	TCCAATTAGG
chr13	91136188	91136189	chr13:91136189:A:G	rs140557143	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	91158251	91158252	chr13:91158252:G:T	rs287493	G	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	91158279	91158280	chr13:91158280:G:A	rs287492	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	91347241	91347242	chr13:91347242:T:A	rs1888138	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	8.087347922669274	2.663366125452918	CCTAATTACC
chr13	91361158	91361159	chr13:91361159:C:T	rs4142965	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	91659757	91659758	chr13:91659758:C:T	rs9523393	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr13	91808439	91808440	chr13:91808440:G:A	rs9515976	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	93003589	93003590	chr13:93003590:C:A	rs308244	C	A	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	93248594	93248595	chr13:93248595:A:G	rs17267523	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr13	94829397	94829398	chr13:94829398:T:A	rs35096200	T	A	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr13	94929667	94929668	chr13:94929668:T:C	rs9590128	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr13	95536996	95536997	chr13:95536997:C:T	rs145691256	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	8.17105328609015	8.305181923889696	CTTAATTAGC
chr13	95537024	95537025	chr13:95537025:A:G	rs149012655	A	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	96429205	96429206	chr13:96429206:T:G	rs601674	T	G	G	Alx1.mouse_homeodomain_1	5	1	+	9.133492773520002	2.844513538817043	TTTAATTAAA
chr13	97110902	97110903	chr13:97110903:C:T	rs7317639	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	97187517	97187518	chr13:97187518:G:C	rs9516853	G	C	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr13	97369594	97369595	chr13:97369595:C:T	rs9516919	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr13	97890764	97890765	chr13:97890765:C:G	rs9556840	C	G	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	98098683	98098684	chr13:98098684:G:A	rs34919413	G	A	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	98279580	98279581	chr13:98279581:C:T	rs7328463	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.874801250211958	8.138185647757648	TTTAATTAAC
chr13	98348172	98348173	chr13:98348173:C:T	rs72655174	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	98477018	98477019	chr13:98477019:C:T	rs138458481	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	98478755	98478756	chr13:98478756:T:C	rs79025709	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr13	98512001	98512002	chr13:98512002:G:C	rs12146952	G	C	g	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	98861289	98861290	chr13:98861290:A:C	rs34503674	A	C	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	99605525	99605526	chr13:99605526:G:T	rs57503049	G	T	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	99859749	99859750	chr13:99859750:T:C	rs17658053	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	99895258	99895259	chr13:99895259:T:C	rs141658308	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.69757138156076	6.09075149171207	TCCAATTAAA
chr13	99956128	99956129	chr13:99956129:C:A	rs751040	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	99956168	99956169	chr13:99956169:C:G	rs751039	C	G	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr13	100098920	100098921	chr13:100098921:T:C	chr13:100098921:T:C	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr13	100502842	100502843	chr13:100502843:T:A	rs3783181	T	A	A	Alx1.mouse_homeodomain_1	8	1	-	9.292909885781963	8.312052953791037	TCTAATTAAC
chr13	100737507	100737508	chr13:100737508:C:T	rs1151366	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	100823346	100823347	chr13:100823347:G:A	rs76620186	G	A	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	100853887	100853888	chr13:100853888:G:T	rs16957811	G	T	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr13	101049478	101049479	chr13:101049479:G:A	rs41281136	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	101191457	101191458	chr13:101191458:C:A	rs34239653	C	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	101618443	101618444	chr13:101618444:A:G	rs9557714	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	101841943	101841944	chr13:101841944:T:C	rs75186141	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	102761249	102761250	chr13:102761250:C:T	rs11839583	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr13	102904046	102904047	chr13:102904047:G:A	rs2209144	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	103016849	103016850	chr13:103016850:A:G	rs9557989	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	103349937	103349938	chr13:103349938:A:G	rs8002886	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.087347922669274	5.480528032820583	CCTAATTACC
chr13	103386344	103386345	chr13:103386345:A:T	rs1330773	A	T	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr13	103386349	103386350	chr13:103386350:G:T	rs1330772	G	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr13	103730904	103730905	chr13:103730905:G:A	rs1274749	G	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr13	104007139	104007140	chr13:104007140:C:T	rs1849445	C	T	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr13	104112071	104112072	chr13:104112072:G:A	rs74683176	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	104140555	104140556	chr13:104140556:T:C	rs79920435	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	104279531	104279532	chr13:104279532:T:A	rs9805369	T	A	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr13	105920071	105920072	chr13:105920072:C:G	rs9519849	C	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr13	105973163	105973164	chr13:105973164:C:T	rs75798371	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	105996509	105996510	chr13:105996510:C:T	rs2247677	C	T	c	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	106010694	106010695	chr13:106010695:C:T	rs9587059	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	106415474	106415475	chr13:106415475:T:A	rs142817309	T	A	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr13	106797014	106797015	chr13:106797015:G:A	rs11069666	G	A	a	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	107284441	107284442	chr13:107284442:G:A	rs9587342	G	A	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr13	107347738	107347739	chr13:107347739:T:C	rs9559012	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	107481744	107481745	chr13:107481745:A:G	rs7335971	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr13	108218986	108218987	chr13:108218987:A:C	rs186554576	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.061628744770331	3.2464963518863947	TCCAATTACA
chr13	108813941	108813942	chr13:108813942:T:C	rs61968848	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr13	110247465	110247466	chr13:110247466:A:G	rs7337819	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	110365436	110365437	chr13:110365437:G:A	rs9521719	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr13	110456287	110456288	chr13:110456288:C:G	rs7996257	C	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr13	110610180	110610181	chr13:110610181:A:C	rs76664666	A	C	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr13	110653439	110653440	chr13:110653440:C:T	rs369788	C	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr13	110712126	110712127	chr13:110712127:G:A	chr13:110712127:G:A	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr13	110857487	110857488	chr13:110857488:C:T	rs7994952	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr13	110971898	110971899	chr13:110971899:C:A	rs34719701	C	A	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	111056391	111056392	chr13:111056392:G:T	rs4773312	G	T	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	111385124	111385125	chr13:111385125:C:T	rs138371384	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr13	111439313	111439314	chr13:111439314:G:A	rs9522234	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	111893074	111893075	chr13:111893075:G:C	rs1345962838	G	C	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr13	111956091	111956092	chr13:111956092:C:T	rs183158688	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	112004135	112004136	chr13:112004136:T:C	rs61467500	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr13	112160476	112160477	chr13:112160477:A:G	rs75639327	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr13	112617596	112617597	chr13:112617597:C:T	rs9604374	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	112668952	112668953	chr13:112668953:A:G	rs79291001	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr13	112908396	112908397	chr13:112908397:G:T	rs2152931	G	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr13	113053387	113053388	chr13:113053388:C:T	rs9604014	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr13	113383191	113383192	chr13:113383192:T:C	rs4907632	T	C	t	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	113416547	113416548	chr13:113416548:C:G	rs9549778	C	G	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr14	19176753	19176754	chr14:19176754:A:G	rs61971174	A	G	.	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	20415770	20415771	chr14:20415771:A:G	rs1713435	A	G	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr14	20548445	20548446	chr14:20548446:G:A	rs58899057	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr14	20782686	20782687	chr14:20782687:G:T	rs11622942	G	T	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	20986899	20986900	chr14:20986900:G:A	rs77985240	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr14	20988882	20988883	chr14:20988883:A:G	rs2783783	A	G	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	20988888	20988889	chr14:20988889:C:T	rs2771342	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	7.879478364183603	8.733508391712851	TCCAATTAGG
chr14	20988910	20988911	chr14:20988911:G:A	rs2783782	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr14	21525701	21525702	chr14:21525702:G:A	chr14:21525702:G:A	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	21525705	21525706	chr14:21525706:T:C	rs370555149	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	21638673	21638674	chr14:21638674:A:G	rs9635159	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	8.563442743761213	2.63653875660115	TCCAATTAGA
chr14	22490323	22490324	chr14:22490324:T:C	rs116307984	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr14	22765663	22765664	chr14:22765664:A:C	rs61974187	A	C	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr14	22836453	22836454	chr14:22836454:G:T	rs1003349	G	T	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr14	23828875	23828876	chr14:23828876:T:C	rs114069027	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	23926273	23926274	chr14:23926274:T:C	rs8005541	T	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	24067664	24067665	chr14:24067665:A:G	rs112614960	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr14	25548122	25548123	chr14:25548123:T:C	rs7157906	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr14	25633812	25633813	chr14:25633813:G:A	rs116191186	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr14	26394671	26394672	chr14:26394672:A:T	rs17495733	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	7.846603954486855	5.128608932279599	TGTAATTAGC
chr14	27252859	27252860	chr14:27252860:C:G	rs8019185	C	G	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	27271314	27271315	chr14:27271315:T:G	rs202978	T	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	27730713	27730714	chr14:27730714:A:T	rs11620936	A	T	T	Alx1.mouse_homeodomain_1	3	1	+	8.874801250211958	5.1473199765203494	TTTAATTAAC
chr14	29548983	29548984	chr14:29548984:G:A	rs77501714	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	29737010	29737011	chr14:29737011:A:T	rs4996739	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	30972269	30972270	chr14:30972270:T:A	rs113549642	T	A	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr14	31164106	31164107	chr14:31164107:G:A	rs72670371	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr14	31264308	31264309	chr14:31264309:T:G	rs116495789	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.589161921660155	3.774029528776218	CCTAATTAGC
chr14	31475973	31475974	chr14:31475974:G:A	rs76338658	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr14	31947612	31947613	chr14:31947613:C:T	rs35186026	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	31947623	31947624	chr14:31947624:C:G	rs1278933	C	G	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	32318547	32318548	chr14:32318548:A:G	rs7146393	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	33061101	33061102	chr14:33061102:A:G	rs1959177	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	33692746	33692747	chr14:33692747:G:T	rs56110150	G	T	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr14	33737078	33737079	chr14:33737079:C:T	rs11845003	C	T	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr14	33766052	33766053	chr14:33766053:A:G	rs718060	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.69757138156076	8.01360700198315	TCCAATTAAA
chr14	34420961	34420962	chr14:34420962:T:C	rs28654922	T	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr14	34516299	34516300	chr14:34516300:G:C	rs7766	G	C	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	34700498	34700499	chr14:34700499:G:A	rs55979914	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	35383187	35383188	chr14:35383188:G:A	rs17514338	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr14	35736084	35736085	chr14:35736085:T:C	rs10141573	T	C	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	36455208	36455209	chr14:36455209:C:G	rs17104536	C	G	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr14	36988828	36988829	chr14:36988829:T:C	rs28487989	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	9.133492773520002	4.145770857251021	TTTAATTAAA
chr14	37626280	37626281	chr14:37626281:A:G	rs987192036	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr14	37791380	37791381	chr14:37791381:G:C	rs67863208	G	C	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	38301894	38301895	chr14:38301895:A:G	rs1754703	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	7.49200941844807	1.565105431288007	CCCAATTACA
chr14	38548283	38548284	chr14:38548284:T:C	rs7147094	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	38710593	38710594	chr14:38710594:G:C	rs7155102	G	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	39217445	39217446	chr14:39217446:C:A	rs2117337	C	A	a	Alx1.mouse_homeodomain_1	8	1	+	8.23885861342153	8.874801250211958	TTTAATTACC
chr14	39494790	39494791	chr14:39494791:A:G	rs72677648	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	39934003	39934004	chr14:39934004:G:A	rs73292776	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	40888630	40888631	chr14:40888631:T:C	rs7141181	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	41070474	41070475	chr14:41070475:G:A	rs4550351	G	A	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr14	41202045	41202046	chr14:41202046:G:A	rs77639584	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.846603954486855	7.980732592286402	TGTAATTAGC
chr14	41227492	41227493	chr14:41227493:G:A	rs1782181	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr14	41609440	41609441	chr14:41609441:G:C	rs17112133	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr14	42365202	42365203	chr14:42365203:T:C	rs11620983	T	C	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr14	43329256	43329257	chr14:43329257:T:A	rs10498383	T	A	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr14	43645183	43645184	chr14:43645184:G:A	rs78173212	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr14	44309730	44309731	chr14:44309731:C:T	rs7154554	C	T	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr14	44964650	44964651	chr14:44964651:G:A	rs73346351	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	45972554	45972555	chr14:45972555:A:G	rs73235840	A	G	a	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr14	46818602	46818603	chr14:46818603:G:C	rs73248956	G	C	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	47976480	47976481	chr14:47976481:C:G	rs79945386	C	G	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr14	48324126	48324127	chr14:48324127:T:C	rs1013799875	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr14	48735600	48735601	chr14:48735601:C:T	rs138430650	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	49218755	49218756	chr14:49218756:C:T	rs4900894	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr14	49586948	49586949	chr14:49586949:A:G	rs140325587	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	50490275	50490276	chr14:50490276:T:C	rs140763376	T	C	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	50928364	50928365	chr14:50928365:C:T	rs3783273	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	51239891	51239892	chr14:51239892:T:C	rs35611833	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.69757138156076	8.01360700198315	TCCAATTAAA
chr14	51239917	51239918	chr14:51239918:T:C	rs113494504	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	51442460	51442461	chr14:51442461:C:T	rs61029578	C	T	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	51667005	51667006	chr14:51667006:G:A	rs58134833	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	51847635	51847636	chr14:51847636:G:A	rs73289374	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	51990026	51990027	chr14:51990027:T:G	rs114902512	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	8.087347922669274	3.9569352287388115	CCTAATTACC
chr14	51990045	51990046	chr14:51990046:C:T	chr14:51990046:C:T	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	52063563	52063564	chr14:52063564:A:C	rs1390966	A	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr14	52686452	52686453	chr14:52686453:C:T	rs35800716	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.346039445977318	7.927930810407313	CCTAATTACA
chr14	52834532	52834533	chr14:52834533:T:C	rs112980595	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.438879858252715	5.8320599684040255	TCCAATTAAC
chr14	52856875	52856876	chr14:52856876:G:T	rs73300769	G	T	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	52920495	52920496	chr14:52920496:T:C	rs4901315	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr14	53620165	53620166	chr14:53620166:A:G	rs1046005509	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr14	53927247	53927248	chr14:53927248:G:A	rs58757077	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	54132246	54132247	chr14:54132247:T:G	rs11622022	T	G	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	54175567	54175568	chr14:54175568:G:T	chr14:54175568:G:T	G	T	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	54177921	54177922	chr14:54177922:A:C	rs811134	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	8.874801250211958	7.536884939530416	TTTAATTAAC
chr14	54188411	54188412	chr14:54188412:T:A	rs10142814	T	A	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	54446917	54446918	chr14:54446918:G:A	rs61311148	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	7.49200941844807	7.147095123247572	CCCAATTACA
chr14	54728485	54728486	chr14:54728486:C:G	rs17127816	C	G	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	54931172	54931173	chr14:54931173:T:C	rs76959452	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.563442743761213	7.879478364183603	TCCAATTAGA
chr14	55104130	55104131	chr14:55104131:T:C	rs10147667	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr14	55412966	55412967	chr14:55412967:A:G	rs10138446	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr14	55539214	55539215	chr14:55539215:T:C	rs17128552	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	56206148	56206149	chr14:56206149:T:G	rs4901653	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.8478534449682	4.032721052084263	CCTAATTAGA
chr14	56490759	56490760	chr14:56490760:C:T	rs8013503	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	56552873	56552874	chr14:56552874:T:A	rs73275318	T	A	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	56687059	56687060	chr14:56687060:G:A	rs59014452	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr14	56898766	56898767	chr14:56898767:C:T	rs11158136	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr14	56997096	56997097	chr14:56997097:A:G	rs67212880	A	G	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr14	57067426	57067427	chr14:57067427:C:A	rs2146858	C	A	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr14	57998267	57998268	chr14:57998268:G:C	rs2747100	G	C	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr14	58059462	58059463	chr14:58059463:A:C	rs115718	A	C	A	Alx1.mouse_homeodomain_1	4	1	+	9.551601409090008	4.089834758368853	TCTAATTAAA
chr14	59094836	59094837	chr14:59094837:G:A	rs3759703	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	59238335	59238336	chr14:59238336:T:C	chr14:59238336:T:C	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.879478364183603	5.272658474334913	TCCAATTAGG
chr14	59417539	59417540	chr14:59417540:A:G	rs28451624	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	59538611	59538612	chr14:59538612:C:T	rs74059550	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	60091440	60091441	chr14:60091441:C:T	rs1054379564	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr14	60534827	60534828	chr14:60534828:C:T	rs12436953	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr14	60565464	60565465	chr14:60565465:C:T	rs76364840	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr14	60778328	60778329	chr14:60778329:C:G	chr14:60778329:C:G	C	G	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr14	61126391	61126392	chr14:61126392:A:G	rs10134030	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr14	61145892	61145893	chr14:61145893:A:G	rs2182982	A	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr14	61187403	61187404	chr14:61187404:G:A	rs117345793	G	A	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	61254454	61254455	chr14:61254455:A:C	rs4902040	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	61269701	61269702	chr14:61269702:G:A	rs9788493	G	A	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr14	61269707	61269708	chr14:61269708:A:G	rs369925969	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr14	61269747	61269748	chr14:61269748:T:C	rs117378915	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	61321058	61321059	chr14:61321059:A:C	chr14:61321059:A:C	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	61469277	61469278	chr14:61469278:G:A	rs12884697	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	61553855	61553856	chr14:61553856:C:T	rs149720369	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	62359608	62359609	chr14:62359609:C:G	rs11844582	C	G	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr14	62465505	62465506	chr14:62465506:C:T	rs1948280	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr14	62482048	62482049	chr14:62482049:G:A	rs118187828	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr14	62501599	62501600	chr14:62501600:A:T	rs61993924	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	8.563442743761213	5.331665796431952	TCCAATTAGA
chr14	63275179	63275180	chr14:63275180:G:A	rs7152391	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr14	63656971	63656972	chr14:63656972:A:C	rs55763522	A	C	a	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr14	63933401	63933402	chr14:63933402:C:A	rs12881652	C	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr14	63950953	63950954	chr14:63950954:C:G	rs945027	C	G	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	64569650	64569651	chr14:64569651:A:G	rs10144661	A	G	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	64596596	64596597	chr14:64596597:C:T	rs10134770	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.438879858252715	7.702264255798406	TCCAATTAAC
chr14	65055840	65055841	chr14:65055841:A:C	rs76233722	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	65186506	65186507	chr14:65186507:A:G	rs1395987950	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.74067261241241	6.133852722563721	TTTAATTAGC
chr14	65239967	65239968	chr14:65239968:C:G	rs57391747	C	G	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	65282678	65282679	chr14:65282679:G:A	rs61987854	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr14	65291517	65291518	chr14:65291518:G:A	rs76824828	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr14	65953312	65953313	chr14:65953313:C:T	rs979713612	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr14	67192177	67192178	chr14:67192178:G:A	rs11158653	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	67555069	67555070	chr14:67555070:G:A	rs112576474	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr14	68195423	68195424	chr14:68195424:T:C	rs80151242	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	68195451	68195452	chr14:68195452:G:A	rs73288097	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr14	68316556	68316557	chr14:68316557:T:C	rs1956532	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr14	68376887	68376888	chr14:68376888:G:C	rs2025009	G	C	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	68507692	68507693	chr14:68507693:A:G	rs739874	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr14	68726107	68726108	chr14:68726108:T:C	rs12895422	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.01360700198315	3.041927348962409	TCCAATTAAG
chr14	68819388	68819389	chr14:68819389:G:A	rs114599135	G	A	g	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr14	69142140	69142141	chr14:69142141:T:A	rs11846184	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	69284812	69284813	chr14:69284813:T:C	rs7141942	T	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	69396125	69396126	chr14:69396126:T:C	chr14:69396126:T:C	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	70002190	70002191	chr14:70002191:G:C	rs1459704	G	C	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	70177579	70177580	chr14:70177580:G:A	rs12884224	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	70177580	70177581	chr14:70177581:C:A	rs12883951	C	A	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	70601683	70601684	chr14:70601684:G:A	rs57598551	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr14	70911815	70911816	chr14:70911816:G:A	rs2810074	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	71453133	71453134	chr14:71453134:A:G	rs550517415	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	71532513	71532514	chr14:71532514:A:T	rs184656812	A	T	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr14	71645920	71645921	chr14:71645921:A:G	rs191978854	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr14	71696183	71696184	chr14:71696184:A:G	rs4140798	A	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr14	72024983	72024984	chr14:72024984:C:T	rs8022882	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	72181137	72181138	chr14:72181138:C:T	rs149653	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr14	72503191	72503192	chr14:72503192:G:A	rs11844952	G	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	72622004	72622005	chr14:72622005:C:T	rs2526930	C	T	t	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr14	72735665	72735666	chr14:72735666:G:A	rs11851733	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr14	72874946	72874947	chr14:72874947:T:G	rs35020117	T	G	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr14	72874957	72874958	chr14:72874958:C:G	rs112598335	C	G	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	72948657	72948658	chr14:72948658:G:A	rs766724522	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	73258341	73258342	chr14:73258342:T:C	rs12590918	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr14	73461750	73461751	chr14:73461751:A:G	rs8015077	A	G	.	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	73784099	73784100	chr14:73784100:A:G	rs78078433	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr14	73889349	73889350	chr14:73889350:T:A	rs74337992	T	A	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	74203888	74203889	chr14:74203889:C:G	rs72728128	C	G	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr14	74210889	74210890	chr14:74210890:T:A	rs7147425	T	A	t	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	75160615	75160616	chr14:75160616:T:A	rs175422	T	A	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	75316554	75316555	chr14:75316555:T:C	rs17103133	T	C	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	75554700	75554701	chr14:75554701:G:A	rs2215910	G	A	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	75554719	75554720	chr14:75554720:A:G	rs74065298	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.061628744770331	3.0899490917495904	TCCAATTACA
chr14	75564859	75564860	chr14:75564860:G:C	rs113126630	G	C	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr14	76125121	76125122	chr14:76125122:G:C	rs28433751	G	C	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	76138756	76138757	chr14:76138757:G:C	rs867141037	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	76346822	76346823	chr14:76346823:C:T	rs7140331	C	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	76696414	76696415	chr14:76696415:G:A	rs115770014	G	A	G	Alx1.mouse_homeodomain_1	9	1	+	8.23169439272197	8.91565877229958	TCTAATTACG
chr14	76715958	76715959	chr14:76715959:C:T	rs10483877	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr14	76985643	76985644	chr14:76985644:A:G	rs28649218	A	G	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	77548025	77548026	chr14:77548026:C:T	rs10142516	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr14	77617204	77617205	chr14:77617205:C:T	rs12323555	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr14	78112705	78112706	chr14:78112706:A:G	rs177159	A	G	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr14	78200275	78200276	chr14:78200276:A:G	rs932246	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	7.44398767566089	4.546893166324515	CCCAATTAAG
chr14	78245312	78245313	chr14:78245313:C:A	rs2178864	C	A	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	79197636	79197637	chr14:79197637:G:C	rs17108933	G	C	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr14	79358762	79358763	chr14:79358763:C:T	rs61993073	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr14	79564961	79564962	chr14:79564962:A:G	rs764254937	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr14	79580611	79580612	chr14:79580612:C:T	rs75242296	C	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr14	79721078	79721079	chr14:79721079:G:A	rs2215839	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr14	79721713	79721714	chr14:79721714:T:G	rs11624148	T	G	G	Alx1.mouse_homeodomain_1	3	1	-	7.802937221462287	3.672524527531825	TCCAATTACC
chr14	80078330	80078331	chr14:80078331:G:A	rs116981265	G	A	g	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	80127730	80127731	chr14:80127731:T:C	rs11623435	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr14	80571152	80571153	chr14:80571153:A:G	rs8011532	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr14	80933241	80933242	chr14:80933242:T:C	rs56757452	T	C	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	80954517	80954518	chr14:80954518:G:A	rs111513088	G	A	G	Alx1.mouse_homeodomain_1	9	1	+	7.662075066399709	8.346039445977318	CCTAATTACG
chr14	81005685	81005686	chr14:81005686:C:T	rs72695026	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr14	81703124	81703125	chr14:81703125:G:A	rs1952373	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	81839382	81839383	chr14:81839383:G:A	rs61987628	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	81991009	81991010	chr14:81991010:T:G	rs2888212	T	G	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr14	82912189	82912190	chr14:82912190:T:C	rs28538809	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr14	83008102	83008103	chr14:83008103:C:T	rs118012946	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	83632640	83632641	chr14:83632641:G:A	rs182093407	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	84312874	84312875	chr14:84312875:G:T	rs12436486	G	T	G	Alx1.mouse_homeodomain_1	2	1	-	8.563442743761213	7.324628867981223	TCCAATTAGA
chr14	85157434	85157435	chr14:85157435:G:A	rs55947233	G	A	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	85165548	85165549	chr14:85165549:A:T	chr14:85165549:A:T	A	T	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr14	85314015	85314016	chr14:85314016:A:G	rs141178362	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr14	85537242	85537243	chr14:85537243:A:G	rs113550301	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	7.886642584883163	4.9895480755467885	TTCAATTAGC
chr14	85865992	85865993	chr14:85865993:C:A	rs181980797	C	A	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	86478873	86478874	chr14:86478874:T:G	rs56661441	T	G	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr14	86557786	86557787	chr14:86557787:T:C	rs12886761	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.940983387749356	2.969303734728615	ACTAATTAGC
chr14	86675214	86675215	chr14:86675215:G:A	rs12588769	G	A	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	86768273	86768274	chr14:86768274:A:G	rs12587330	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	86894303	86894304	chr14:86894304:C:T	rs6574915	C	T	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	87863351	87863352	chr14:87863352:A:G	rs1555556	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr14	88005432	88005433	chr14:88005433:T:G	rs10139526	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	7.852546319205846	3.722133625275384	CCTAATTAGT
chr14	89000391	89000392	chr14:89000392:T:C	rs78398562	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	89059649	89059650	chr14:89059650:G:T	rs11159882	G	T	T	Alx1.mouse_homeodomain_1	8	1	-	8.656967248991535	9.292909885781963	TCTAATTACC
chr14	89088367	89088368	chr14:89088368:A:C	chr14:89088368:A:C	A	C	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	89199575	89199576	chr14:89199576:A:G	rs60137734	A	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr14	89386643	89386644	chr14:89386644:A:G	rs6575060	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr14	89927364	89927365	chr14:89927365:C:T	rs765030	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	90398089	90398090	chr14:90398090:G:T	rs537370236	G	T	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr14	90624774	90624775	chr14:90624775:T:G	rs74081245	T	G	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	90697824	90697825	chr14:90697825:C:G	rs78813839	C	G	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	90697830	90697831	chr14:90697831:C:T	rs1952030	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	90705067	90705068	chr14:90705068:C:T	rs1742093	C	T	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr14	90780046	90780047	chr14:90780047:C:T	rs17127005	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	8.23885861342153	7.893944318221031	TTTAATTACC
chr14	91202236	91202237	chr14:91202237:G:T	rs117679538	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	91228793	91228794	chr14:91228794:A:G	rs8017969	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	7.879478364183603	1.9525743770235395	TCCAATTAGG
chr14	91397544	91397545	chr14:91397545:T:A	rs960476150	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	7.846603954486855	5.128608932279599	TGTAATTAGC
chr14	91448731	91448732	chr14:91448732:C:T	rs4633646	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	91575763	91575764	chr14:91575764:G:A	rs11160016	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr14	91638077	91638078	chr14:91638078:C:T	rs1704633	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr14	91744295	91744296	chr14:91744296:A:C	rs78430956	A	C	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr14	91858849	91858850	chr14:91858850:C:T	rs17127634	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	91990654	91990655	chr14:91990655:A:G	rs76786632	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	92040352	92040353	chr14:92040353:G:A	rs1955684	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr14	92206162	92206163	chr14:92206163:C:T	rs61976635	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	92396833	92396834	chr14:92396834:T:C	rs61367228	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr14	92460953	92460954	chr14:92460954:T:C	rs4904918	T	C	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr14	92794975	92794976	chr14:92794976:A:G	rs8012173	A	G	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr14	92863927	92863928	chr14:92863928:A:G	rs73341019	A	G	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	92890443	92890444	chr14:92890444:C:A	rs56137244	C	A	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr14	94171538	94171539	chr14:94171539:T:A	rs75404723	T	A	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr14	94175529	94175530	chr14:94175530:G:T	rs1956455	G	T	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr14	94579566	94579567	chr14:94579567:T:C	rs10144561	T	C	t	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	94891004	94891005	chr14:94891005:A:G	rs2994688	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr14	94971956	94971957	chr14:94971957:G:C	rs111243417	G	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	95197476	95197477	chr14:95197477:C:T	rs7156411	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	95204960	95204961	chr14:95204961:T:C	rs1187616	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	95238898	95238899	chr14:95238899:G:A	rs8007366	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	95513117	95513118	chr14:95513118:G:A	rs179153	G	A	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr14	95534812	95534813	chr14:95534813:T:A	rs45582537	T	A	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	95994708	95994709	chr14:95994709:T:G	rs80133929	T	G	T	Alx1.mouse_homeodomain_1	4	1	-	9.292909885781963	3.8311432350608086	TCTAATTAAC
chr14	95994711	95994712	chr14:95994712:G:T	rs72702814	G	T	G	Alx1.mouse_homeodomain_1	1	1	-	9.292909885781963	7.699597959614178	TCTAATTAAC
chr14	96017022	96017023	chr14:96017023:G:A	rs561766507	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	96402854	96402855	chr14:96402855:C:T	rs8008113	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr14	96514638	96514639	chr14:96514639:A:G	rs34456516	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	96674052	96674053	chr14:96674053:A:G	rs17244377	A	G	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	96747096	96747097	chr14:96747097:G:A	rs79210236	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	97832588	97832589	chr14:97832589:T:C	rs59494684	T	C	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	98656516	98656517	chr14:98656517:C:T	rs141679004	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr14	99006651	99006652	chr14:99006652:T:C	rs1257633	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	99774961	99774962	chr14:99774962:G:A	rs61190577	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.940983387749356	8.075112025548904	ACTAATTAGC
chr14	100268330	100268331	chr14:100268331:A:G	rs3783340	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.69757138156076	8.1279520552385	TCCAATTAAA
chr14	100524951	100524952	chr14:100524952:T:C	rs116628813	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.69757138156076	3.70984946529178	TCCAATTAAA
chr14	100665139	100665140	chr14:100665140:A:G	rs17660210	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr14	100712377	100712378	chr14:100712378:C:G	rs72698720	C	G	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr14	101413538	101413539	chr14:101413539:A:G	rs4900507	A	G	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	101818741	101818742	chr14:101818742:T:C	rs61994043	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr14	102579988	102579989	chr14:102579989:T:C	rs13329052	T	C	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr14	102580021	102580022	chr14:102580022:C:T	rs116186895	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	102580022	102580023	chr14:102580023:G:A	rs940062510	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	102591429	102591430	chr14:102591430:T:C	chr14:102591430:T:C	T	C	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	102901580	102901581	chr14:102901581:C:T	rs73350779	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	103092864	103092865	chr14:103092865:T:C	rs57913635	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.438879858252715	5.8320599684040255	TCCAATTAAC
chr14	103150145	103150146	chr14:103150146:A:T	rs7494282	A	T	A	Alx1.mouse_homeodomain_1	2	1	-	8.74067261241241	6.647828709103172	TTTAATTAGC
chr14	103188451	103188452	chr14:103188452:A:G	rs10135919	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr14	103248841	103248842	chr14:103248842:G:A	rs11626942	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.981982082767747	9.551601409090008	CCTAATTAAA
chr14	103362788	103362789	chr14:103362789:C:A	rs62006960	C	A	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr14	103633471	103633472	chr14:103633472:G:A	rs75986142	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	103749955	103749956	chr14:103749956:C:T	rs2295140	C	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr14	103817264	103817265	chr14:103817265:G:T	rs185550975	G	T	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	104071794	104071795	chr14:104071795:A:G	rs35775205	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr14	104159183	104159184	chr14:104159184:C:T	rs118061047	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr14	104202545	104202546	chr14:104202546:G:T	rs71419805	G	T	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr14	104206587	104206588	chr14:104206588:G:A	rs150404953	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	104210432	104210433	chr14:104210433:G:C	rs12895469	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr14	104321218	104321219	chr14:104321219:A:G	chr14:104321219:A:G	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	104383671	104383672	chr14:104383672:T:A	rs113352604	T	A	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	104661116	104661117	chr14:104661117:A:G	rs56138896	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr14	105524282	105524283	chr14:105524283:T:A	rs8013055	T	A	.	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	7.040648870210764	TTTAATTAAA
chr15	20292276	20292277	chr15:20292277:T:A	rs4247643	T	A	-	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	20359152	20359153	chr15:20359153:A:G	rs28701554	A	G	a	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr15	22779414	22779415	chr15:22779415:G:A	rs62001121	G	A	g	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr15	22860319	22860320	chr15:22860320:T:C	rs12439822	T	C	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr15	25717854	25717855	chr15:25717855:T:C	rs74003874	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr15	25982201	25982202	chr15:25982202:A:T	rs34487669	A	T	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr15	26515557	26515558	chr15:26515558:T:C	rs2928719	T	C	t	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	26725080	26725081	chr15:26725081:A:G	rs60229432	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	9.292909885781963	9.158781247982416	TCTAATTAAC
chr15	26901514	26901515	chr15:26901515:A:C	rs12910133	A	C	a	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	27381940	27381941	chr15:27381941:C:T	rs9672858	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	27743003	27743004	chr15:27743004:T:C	rs2871771	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	27846594	27846595	chr15:27846595:G:T	chr15:27846595:G:T	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr15	28921830	28921831	chr15:28921831:C:G	rs56334555	C	G	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	28921842	28921843	chr15:28921843:T:G	rs56794407	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	28963163	28963164	chr15:28963164:T:C	rs10162735	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	29150587	29150588	chr15:29150588:A:T	rs7170357	A	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr15	29467719	29467720	chr15:29467720:G:A	rs75103958	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	29531972	29531973	chr15:29531973:C:T	rs1455821237	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	29990315	29990316	chr15:29990316:C:T	rs7164994	C	T	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr15	30073973	30073974	chr15:30073974:G:A	rs73375195	G	A	.	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	30922445	30922446	chr15:30922446:A:G	rs1474382	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.91565877229958	6.018564262963203	TCTAATTACA
chr15	31016174	31016175	chr15:31016175:T:C	rs16956455	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	32943846	32943847	chr15:32943847:C:G	rs80110304	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	7.993823417438953	7.49200941844807	CCCAATTAGA
chr15	33014886	33014887	chr15:33014887:A:G	rs345826	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	33143740	33143741	chr15:33143741:G:A	rs2444973	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	33292846	33292847	chr15:33292847:A:G	rs989793268	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr15	33323918	33323919	chr15:33323919:A:G	rs16969320	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	33644677	33644678	chr15:33644678:A:G	rs16957135	A	G	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr15	34304681	34304682	chr15:34304682:C:T	rs113571027	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr15	34583609	34583610	chr15:34583610:G:T	rs2655326	G	T	g	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	34754614	34754615	chr15:34754615:T:A	rs2277558	T	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr15	35141893	35141894	chr15:35141894:C:T	rs76763248	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr15	35184690	35184691	chr15:35184691:G:A	rs16960605	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr15	35256607	35256608	chr15:35256608:G:A	rs2622758	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	35932834	35932835	chr15:35932835:A:G	rs1858244	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	36275837	36275838	chr15:36275838:T:C	rs17642282	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr15	36778356	36778357	chr15:36778357:A:C	rs16964032	A	C	A	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.874801250211958	TTTAATTAAA
chr15	36912283	36912284	chr15:36912284:A:C	chr15:36912284:A:C	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	9.133492773520002	8.497550136729574	TTTAATTAAA
chr15	36966413	36966414	chr15:36966414:G:A	rs16964414	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	37878498	37878499	chr15:37878499:T:C	rs16965835	T	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	38577464	38577465	chr15:38577465:G:A	rs17651741	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	38789515	38789516	chr15:38789516:C:T	rs2929681	C	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr15	38995182	38995183	chr15:38995183:T:C	rs2035060	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	39129700	39129701	chr15:39129701:T:C	rs7179566	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.01360700198315	5.40678711213446	TCCAATTAAG
chr15	39255324	39255325	chr15:39255325:A:C	rs60456859	A	C	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	39574469	39574470	chr15:39574470:T:G	rs28537569	T	G	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	39578475	39578476	chr15:39578476:A:T	rs1382443	A	T	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	39587107	39587108	chr15:39587108:G:A	rs1904209	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	39963868	39963869	chr15:39963869:A:T	rs17721122	A	T	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	39964122	39964123	chr15:39964123:T:C	rs558662	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	40003757	40003758	chr15:40003758:C:T	rs2412459	C	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	40029922	40029923	chr15:40029923:T:C	rs937213	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.01360700198315	5.116512492646776	TCCAATTAAG
chr15	40052172	40052173	chr15:40052173:G:A	rs1449077704	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr15	40352044	40352045	chr15:40352045:T:A	rs35777573	T	A	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	41133573	41133574	chr15:41133574:C:T	rs116679528	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	41692339	41692340	chr15:41692340:G:A	rs12441249	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr15	42145351	42145352	chr15:42145352:C:A	rs622083	C	A	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr15	42594457	42594458	chr15:42594458:C:T	rs17767264	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	7.662075066399709	8.346039445977318	CCTAATTACG
chr15	43246312	43246313	chr15:43246313:G:A	rs7162827	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr15	43809121	43809122	chr15:43809122:T:C	rs115362284	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	44555603	44555604	chr15:44555604:A:T	rs80255833	A	T	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr15	44722462	44722463	chr15:44722463:A:T	rs17588081	A	T	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	44853641	44853642	chr15:44853642:G:T	rs2948906	G	T	N	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	45037121	45037122	chr15:45037122:A:G	rs111896706	A	G	a	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr15	45327036	45327037	chr15:45327037:T:C	rs560144049	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	45747339	45747340	chr15:45747340:T:C	rs1033167	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.23885861342153	2.311954626261465	TTTAATTACC
chr15	47602338	47602339	chr15:47602339:G:A	rs72735813	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	47602354	47602355	chr15:47602355:A:G	rs1435755	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr15	47694884	47694885	chr15:47694885:A:G	rs1912641	A	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr15	47791412	47791413	chr15:47791413:C:T	rs9672207	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	48533437	48533438	chr15:48533438:G:A	rs1420884007	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	48555833	48555834	chr15:48555834:C:A	chr15:48555834:C:A	C	A	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	48566406	48566407	chr15:48566407:A:T	rs148927513	A	T	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	48939492	48939493	chr15:48939493:T:A	rs16961913	T	A	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	49372471	49372472	chr15:49372472:C:T	rs11633282	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	49628327	49628328	chr15:49628328:G:A	rs193168759	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	49628336	49628337	chr15:49628337:A:G	rs75642050	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	49979887	49979888	chr15:49979888:A:G	rs8034382	A	G	a	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr15	49985545	49985546	chr15:49985546:C:T	rs16963149	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr15	50145617	50145618	chr15:50145618:T:C	rs12443171	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr15	50145648	50145649	chr15:50145649:C:T	rs28550188	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	50234974	50234975	chr15:50234975:G:A	rs7163191	G	A	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr15	50883938	50883939	chr15:50883939:T:C	rs2614779	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr15	51144963	51144964	chr15:51144964:G:A	rs60281978	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.17105328609015	8.74067261241241	CTTAATTAGC
chr15	51343048	51343049	chr15:51343049:A:G	rs2445766	A	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr15	51378278	51378279	chr15:51378279:T:C	rs2470172	T	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr15	51558454	51558455	chr15:51558455:T:C	rs12441167	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	51750634	51750635	chr15:51750635:T:G	rs7166110	T	G	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	51775457	51775458	chr15:51775458:A:G	rs12903781	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	51907340	51907341	chr15:51907341:A:T	rs148649444	A	T	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	52069607	52069608	chr15:52069608:T:A	rs4775999	T	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr15	52833586	52833587	chr15:52833587:A:G	rs2120440	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	53222999	53223000	chr15:53223000:G:A	rs1911687	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	53362938	53362939	chr15:53362939:T:G	rs12439342	T	G	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	53362941	53362942	chr15:53362942:C:T	rs79869069	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	53590630	53590631	chr15:53590631:T:C	rs11858504	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	53611849	53611850	chr15:53611850:T:G	rs117235942	T	G	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr15	53984293	53984294	chr15:53984294:A:G	rs17664311	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr15	54321737	54321738	chr15:54321738:A:C	rs12917191	A	C	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	54354565	54354566	chr15:54354566:C:T	rs117316830	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr15	55019364	55019365	chr15:55019365:G:T	rs1690366	G	T	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr15	55218223	55218224	chr15:55218224:G:T	rs79029860	G	T	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr15	55218242	55218243	chr15:55218243:A:G	rs78587257	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	55372890	55372891	chr15:55372891:T:C	rs8041885	T	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	55375370	55375371	chr15:55375371:T:G	rs7177888	T	G	G	Alx1.mouse_homeodomain_1	2	1	+	9.551601409090008	6.5521038545950026	TCTAATTAAA
chr15	55567596	55567597	chr15:55567597:A:G	rs11636163	A	G	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr15	55567599	55567600	chr15:55567600:C:G	rs115432440	C	G	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr15	55894669	55894670	chr15:55894670:T:A	rs73416241	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	8.312052953791037	2.8880711565746804	TCTAATTATC
chr15	55991528	55991529	chr15:55991529:A:C	rs12911653	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.061628744770331	3.9312160508398697	TCCAATTACA
chr15	56925532	56925533	chr15:56925533:A:G	rs169893	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	57135289	57135290	chr15:57135290:T:C	rs75807126	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	57370829	57370830	chr15:57370830:G:A	rs1664478	G	A	g	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr15	57382224	57382225	chr15:57382225:A:G	rs77733885	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.570744477099081	8.00112515077682	TCTAATTATA
chr15	57409551	57409552	chr15:57409552:C:G	rs1706377	C	G	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	57421034	57421035	chr15:57421035:T:A	rs11071316	T	A	T	Alx1.mouse_homeodomain_1	3	1	-	8.087347922669274	4.359866648977665	CCTAATTACC
chr15	57500548	57500549	chr15:57500549:C:G	chr15:57500549:C:G	C	G	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr15	57532717	57532718	chr15:57532718:A:G	rs1690337	A	G	a	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr15	57655433	57655434	chr15:57655434:C:T	rs4774277	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr15	58410664	58410665	chr15:58410665:T:C	rs17821310	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr15	58440238	58440239	chr15:58440239:G:A	rs746141797	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	58772765	58772766	chr15:58772766:G:T	rs17301982	G	T	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	59563014	59563015	chr15:59563015:T:C	rs34805018	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	59711305	59711306	chr15:59711306:A:C	rs3894007	A	C	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr15	59711877	59711878	chr15:59711878:C:G	rs17236867	C	G	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr15	59794924	59794925	chr15:59794925:A:G	rs12594880	A	G	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr15	60218848	60218849	chr15:60218849:C:G	rs1681516	C	G	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	60228778	60228779	chr15:60228779:G:C	rs185935098	G	C	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr15	60371188	60371189	chr15:60371189:C:G	chr15:60371189:C:G	C	G	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr15	60639042	60639043	chr15:60639043:C:G	rs12592002	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	60639056	60639057	chr15:60639057:T:G	rs12594561	T	G	G	Alx1.mouse_homeodomain_1	2	1	+	8.422165645528107	5.422668091033102	TCTAATTAGT
chr15	60761751	60761752	chr15:60761752:A:G	rs922783	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	60788870	60788871	chr15:60788871:T:C	rs341457	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	60902034	60902035	chr15:60902035:A:G	rs2899663	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr15	60905520	60905521	chr15:60905521:G:A	rs78689552	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	60995001	60995002	chr15:60995002:C:T	rs55988712	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	61442522	61442523	chr15:61442523:G:T	rs12592713	G	T	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	61442551	61442552	chr15:61442552:C:T	rs35391470	C	T	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr15	61621445	61621446	chr15:61621446:G:A	rs2414713	G	A	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr15	61644394	61644395	chr15:61644395:C:A	rs77182641	C	A	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	61830785	61830786	chr15:61830786:C:T	rs78418780	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr15	61916388	61916389	chr15:61916389:T:C	rs7177538	T	C	T	Alx1.mouse_homeodomain_1	8	1	+	8.570744477099081	8.91565877229958	TCTAATTATA
chr15	62225708	62225709	chr15:62225709:A:C	rs2697334	A	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	62295423	62295424	chr15:62295424:C:T	rs62004705	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr15	62295450	62295451	chr15:62295451:G:C	rs11856956	G	C	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	62955239	62955240	chr15:62955240:T:G	rs2414805	T	G	g	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	62976464	62976465	chr15:62976465:G:T	rs73434186	G	T	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	63191090	63191091	chr15:63191091:G:A	rs2652817	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.305181923889696	7.568566321435387	CTTAATTAAC
chr15	63407804	63407805	chr15:63407805:T:C	rs290560	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	63553225	63553226	chr15:63553226:A:G	rs62011344	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	63939416	63939417	chr15:63939417:C:T	rs73452775	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr15	64400850	64400851	chr15:64400851:G:A	rs150491308	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	64427104	64427105	chr15:64427105:A:G	rs16947959	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	64602078	64602079	chr15:64602079:G:A	rs11071802	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	65412777	65412778	chr15:65412778:A:T	rs1550026	A	T	a	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	66069989	66069990	chr15:66069990:C:T	rs12905091	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr15	66114235	66114236	chr15:66114236:T:C	rs8039191	T	C	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr15	66133435	66133436	chr15:66133436:A:G	rs899085	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	66169540	66169541	chr15:66169541:C:T	rs4776756	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr15	66189167	66189168	chr15:66189168:C:T	rs8034534	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.087347922669274	7.350732320214965	CCTAATTACC
chr15	66189172	66189173	chr15:66189173:C:A	rs12148773	C	A	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr15	66364709	66364710	chr15:66364710:T:C	rs12101389	T	C	t	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	66370357	66370358	chr15:66370358:C:T	rs8027432	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	66775798	66775799	chr15:66775799:G:A	rs150532644	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr15	66930093	66930094	chr15:66930094:A:G	rs266367	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	7.852546319205846	6.998516291676599	CCTAATTAGT
chr15	66932146	66932147	chr15:66932147:A:G	rs266368	A	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr15	67098419	67098420	chr15:67098420:G:A	rs147298653	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	67373227	67373228	chr15:67373228:A:G	rs34983272	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	67373232	67373233	chr15:67373233:T:A	rs76024542	T	A	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr15	67581706	67581707	chr15:67581707:C:T	rs11638507	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr15	67822328	67822329	chr15:67822329:T:C	rs75232474	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr15	67840232	67840233	chr15:67840233:A:C	rs77327652	A	C	A	Alx1.mouse_homeodomain_1	7	1	+	8.312052953791037	5.033607070530936	TCTAATTATC
chr15	67840254	67840255	chr15:67840255:G:T	rs190878078	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr15	68341195	68341196	chr15:68341196:G:A	rs7169899	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	68423160	68423161	chr15:68423161:G:T	rs7165618	G	T	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr15	68524669	68524670	chr15:68524670:C:T	rs895127	C	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr15	68560470	68560471	chr15:68560471:A:T	rs76417804	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	69758721	69758722	chr15:69758722:C:T	rs16953716	C	T	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	70101537	70101538	chr15:70101538:C:T	rs186266891	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr15	70539474	70539475	chr15:70539475:T:C	rs6494876	T	C	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	70787244	70787245	chr15:70787245:A:C	rs8040890	A	C	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr15	71349211	71349212	chr15:71349212:T:C	rs3759830	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr15	71449755	71449756	chr15:71449756:G:A	rs60468286	G	A	g	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr15	71494469	71494470	chr15:71494470:C:T	rs113739855	C	T	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr15	71893944	71893945	chr15:71893945:A:T	rs2128112	A	T	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	72228466	72228467	chr15:72228467:G:T	rs73438414	G	T	g	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr15	72778940	72778941	chr15:72778941:G:A	rs12594938	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr15	72926974	72926975	chr15:72926975:G:A	rs8037372	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	73162692	73162693	chr15:73162693:T:C	rs4776627	T	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr15	73784225	73784226	chr15:73784226:T:C	rs74023545	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	9.551601409090008	8.867637029512398	TCTAATTAAA
chr15	74035864	74035865	chr15:74035865:G:C	rs743582	G	C	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	74137791	74137792	chr15:74137792:T:C	rs115696495	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.879478364183603	5.272658474334913	TCCAATTAGG
chr15	74241286	74241287	chr15:74241287:C:T	rs62003670	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	74779488	74779489	chr15:74779489:C:G	rs78957305	C	G	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	74791946	74791947	chr15:74791947:A:G	rs4886627	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.304751220453168	3.3330715674324276	TCCAATTAGC
chr15	74817306	74817307	chr15:74817307:G:C	rs79879088	G	C	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	75059288	75059289	chr15:75059289:T:C	rs72730583	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	75079094	75079095	chr15:75079095:C:T	rs6495148	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	76010830	76010831	chr15:76010831:T:C	rs16967774	T	C	t	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr15	77667683	77667684	chr15:77667684:T:C	rs73457843	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr15	77763215	77763216	chr15:77763216:T:A	rs56013767	T	A	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr15	77772881	77772882	chr15:77772882:G:A	rs12592419	G	A	G	Alx1.mouse_homeodomain_1	0	1	+	7.8208649373008745	7.940983387749356	GCTAATTAGC
chr15	78057932	78057933	chr15:78057933:G:C	rs138360446	G	C	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	78184358	78184359	chr15:78184359:T:A	rs34128727	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	78236195	78236196	chr15:78236196:C:T	rs12708524	C	T	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	78236218	78236219	chr15:78236219:A:C	rs11637289	A	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr15	78397326	78397327	chr15:78397327:G:A	rs3825849	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	78487167	78487168	chr15:78487168:T:A	rs36146269	T	A	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	79190273	79190274	chr15:79190274:G:T	rs56940746	G	T	g	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	79887504	79887505	chr15:79887505:C:T	rs8042012	C	T	T	Alx1.mouse_homeodomain_1	1	1	+	8.304751220453168	7.886642584883163	TCCAATTAGC
chr15	79966731	79966732	chr15:79966732:G:A	rs7180804	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr15	80003281	80003282	chr15:80003282:C:A	rs34309449	C	A	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr15	80340895	80340896	chr15:80340896:A:G	rs77638853	A	G	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	80388356	80388357	chr15:80388357:C:T	rs12900693	C	T	c	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr15	80699105	80699106	chr15:80699106:T:C	rs34994596	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	81267633	81267634	chr15:81267634:T:C	rs7182512	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	8.8478534449682	5.950758935631824	CCTAATTAGA
chr15	82715316	82715317	chr15:82715317:A:G	rs28607761	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	83871898	83871899	chr15:83871899:A:G	rs4842837	A	G	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr15	83889923	83889924	chr15:83889924:A:G	rs28705374	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	84750948	84750949	chr15:84750949:T:G	rs113736895	T	G	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	84836264	84836265	chr15:84836265:T:C	rs7164787	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr15	84836312	84836313	chr15:84836313:T:C	rs7164817	T	C	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	84889561	84889562	chr15:84889562:G:A	rs35280494	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	85305291	85305292	chr15:85305292:G:A	rs118091653	G	A	N	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr15	85615442	85615443	chr15:85615443:G:A	rs34387822	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	85650477	85650478	chr15:85650478:T:C	rs4240775	T	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr15	85669634	85669635	chr15:85669635:A:G	rs12904047	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	86312776	86312777	chr15:86312777:A:G	rs924171	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	86619573	86619574	chr15:86619574:C:T	rs113985341	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	86619584	86619585	chr15:86619585:A:C	rs16977848	A	C	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	86829484	86829485	chr15:86829485:G:C	rs74027126	G	C	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr15	86854448	86854449	chr15:86854449:A:G	rs183121374	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr15	87332682	87332683	chr15:87332683:G:A	rs8036553	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	87434244	87434245	chr15:87434245:A:G	rs2679073	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.879478364183603	2.907798711162862	TCCAATTAGG
chr15	87448525	87448526	chr15:87448526:C:T	rs56395531	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr15	88022836	88022837	chr15:88022837:T:A	rs75735105	T	A	T	Alx1.mouse_homeodomain_1	1	1	+	8.17105328609015	6.99584999549237	CTTAATTAGC
chr15	88296490	88296491	chr15:88296491:G:A	rs4887404	G	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	88614368	88614369	chr15:88614369:T:G	rs12908273	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	7.846603954486855	3.7161912605563927	TGTAATTAGC
chr15	88614370	88614371	chr15:88614371:C:T	rs11856531	C	T	T	Alx1.mouse_homeodomain_1	1	1	-	7.846603954486855	7.565469321814631	TGTAATTAGC
chr15	88917706	88917707	chr15:88917707:A:G	rs72749924	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	89053890	89053891	chr15:89053891:C:T	rs17793647	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr15	89346950	89346951	chr15:89346951:A:C	rs176641	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	89346984	89346985	chr15:89346985:G:A	rs180917496	G	A	g	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr15	89364215	89364216	chr15:89364216:C:T	rs117538444	C	T	c	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr15	89497087	89497088	chr15:89497088:C:T	rs187640684	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr15	90002517	90002518	chr15:90002518:G:T	rs55961512	G	T	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	90253860	90253861	chr15:90253861:C:T	rs12914775	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	90265462	90265463	chr15:90265463:G:C	rs750939764	G	C	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr15	90873334	90873335	chr15:90873335:C:T	rs80291522	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr15	90873374	90873375	chr15:90873375:T:C	rs1981458	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	91142288	91142289	chr15:91142289:T:C	rs17594278	T	C	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr15	91142292	91142293	chr15:91142293:T:C	rs72764737	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr15	91247681	91247682	chr15:91247682:A:G	rs185345462	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	91256632	91256633	chr15:91256633:G:A	rs11073989	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr15	91537208	91537209	chr15:91537209:C:T	rs1269781184	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	91537247	91537248	chr15:91537248:A:G	rs6496820	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr15	91966685	91966686	chr15:91966686:A:G	rs10852165	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr15	91966691	91966692	chr15:91966692:A:C	rs17596569	A	C	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr15	92208913	92208914	chr15:92208914:C:T	rs4777750	C	T	-	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	92243573	92243574	chr15:92243574:T:A	rs7179587	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	92243575	92243576	chr15:92243576:G:T	rs62009280	G	T	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	92376059	92376060	chr15:92376060:A:G	rs1994459	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr15	92624626	92624627	chr15:92624627:C:T	rs75722350	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	92672138	92672139	chr15:92672139:T:G	rs57086675	T	G	.	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	92792897	92792898	chr15:92792898:A:C	rs62020851	A	C	C	Alx1.mouse_homeodomain_1	5	1	-	7.869260531930455	1.5802812972274953	CCCAATTAAC
chr15	92914730	92914731	chr15:92914731:A:T	rs28458425	A	T	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr15	93260546	93260547	chr15:93260547:A:G	rs12916033	A	G	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr15	93456227	93456228	chr15:93456228:T:A	rs2130100	T	A	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr15	93671357	93671358	chr15:93671358:A:T	rs7174977	A	T	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	93824736	93824737	chr15:93824737:T:C	rs2066389	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	94078483	94078484	chr15:94078484:A:G	rs1479830	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	94418015	94418016	chr15:94418016:A:G	rs7176028	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr15	94419264	94419265	chr15:94419265:T:C	rs7169651	T	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr15	94791128	94791129	chr15:94791129:A:G	rs7176209	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	9.292909885781963	8.438879858252715	TCTAATTAAC
chr15	95171863	95171864	chr15:95171864:C:A	rs149215071	C	A	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr15	95287351	95287352	chr15:95287352:T:C	rs34273151	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	95363756	95363757	chr15:95363757:C:A	rs150039871	C	A	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr15	95556633	95556634	chr15:95556634:G:T	rs3887106	G	T	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr15	95557867	95557868	chr15:95557868:C:T	rs111230478	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	95627142	95627143	chr15:95627143:A:G	rs76599359	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	7.993823417438953	3.006101501169972	CCCAATTAGA
chr15	95627151	95627152	chr15:95627152:C:G	rs192070698	C	G	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	95676273	95676274	chr15:95676274:A:G	rs7166920	A	G	G	Alx1.mouse_homeodomain_1	0	1	-	9.551601409090008	8.981982082767747	TCTAATTAAA
chr15	95681991	95681992	chr15:95681992:G:T	rs4247092	G	T	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	95929733	95929734	chr15:95929734:C:T	rs74034819	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	96294546	96294547	chr15:96294547:A:G	rs12906150	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr15	96319669	96319670	chr15:96319670:C:T	rs947485039	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	7.9549935751004215	7.218377972646112	GCTAATTAAC
chr15	96321160	96321161	chr15:96321161:C:T	rs73471277	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	96338274	96338275	chr15:96338275:A:C	rs145666632	A	C	A	Alx1.mouse_homeodomain_1	4	1	+	9.417472771290461	3.9557061205693063	TCTAATTAGA
chr15	96494011	96494012	chr15:96494012:T:C	rs12593432	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr15	96500066	96500067	chr15:96500067:G:A	rs8036282	G	A	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	97235402	97235403	chr15:97235403:C:T	rs928768853	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr15	97821520	97821521	chr15:97821521:C:T	rs8024493	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	97902936	97902937	chr15:97902937:C:T	rs9920622	C	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	98101992	98101993	chr15:98101993:G:A	rs11855844	G	A	-	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	98444203	98444204	chr15:98444204:C:T	rs11635298	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr15	98447170	98447171	chr15:98447171:C:G	rs35213300	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	98779863	98779864	chr15:98779864:A:G	rs1434544836	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr15	98800461	98800462	chr15:98800462:T:C	rs140504245	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr15	99056153	99056154	chr15:99056154:C:T	rs2654963	C	T	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	99167740	99167741	chr15:99167741:C:A	chr15:99167741:C:A	C	A	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr15	99304337	99304338	chr15:99304338:G:A	rs34448644	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	99445295	99445296	chr15:99445296:A:G	rs4965493	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	99646284	99646285	chr15:99646285:A:C	rs116924016	A	C	A	Alx1.mouse_homeodomain_1	7	1	+	8.298017703190137	5.019571819930037	CCTAATTAAG
chr15	99704110	99704111	chr15:99704111:A:C	rs35043171	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.74067261241241	3.9255402195284734	TTTAATTAGC
chr15	99820471	99820472	chr15:99820472:G:T	rs56160817	G	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	100115203	100115204	chr15:100115204:T:A	rs11247153	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr15	100153511	100153512	chr15:100153512:G:C	rs113201502	G	C	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr15	100153523	100153524	chr15:100153524:G:C	rs66905224	G	C	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr15	100230885	100230886	chr15:100230886:C:G	rs373921310	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	100326812	100326813	chr15:100326813:G:C	rs7182739	G	C	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr15	100329080	100329081	chr15:100329081:G:C	rs952597	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr15	100329088	100329089	chr15:100329089:T:C	rs8034205	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	100430772	100430773	chr15:100430773:T:G	rs2654604	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	100684891	100684892	chr15:100684892:T:C	rs2002791	T	C	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr15	100738101	100738102	chr15:100738102:T:C	rs11247232	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	100830275	100830276	chr15:100830276:C:G	rs117662931	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr15	101128828	101128829	chr15:101128829:C:T	rs140514214	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	101277751	101277752	chr15:101277752:C:T	rs147254600	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	101277758	101277759	chr15:101277759:G:A	rs534043998	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	101374710	101374711	chr15:101374711:A:G	rs28669804	A	G	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr15	101382849	101382850	chr15:101382850:G:T	rs11858775	G	T	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	101411617	101411618	chr15:101411618:A:C	rs11633098	A	C	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr15	101455768	101455769	chr15:101455769:C:T	rs138625095	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr15	101455769	101455770	chr15:101455770:G:A	rs149322227	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr15	101642053	101642054	chr15:101642054:A:G	chr15:101642054:A:G	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr16	52638	52639	chr16:52639:G:A	chr16:52639:G:A	G	A	g	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr16	279210	279211	chr16:279211:T:C	rs448971	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	279234	279235	chr16:279235:T:C	rs546596847	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.346039445977318	5.448944936640942	CCTAATTACA
chr16	357329	357330	chr16:357330:G:C	rs35123446	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	742037	742038	chr16:742038:A:G	rs4984922	A	G	a	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	908300	908301	chr16:908301:C:G	rs4984972	C	G	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr16	991088	991089	chr16:991089:G:A	rs900303780	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	1151614	1151615	chr16:1151615:G:A	rs3809635	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	1315965	1315966	chr16:1315966:C:T	rs4984808	C	T	c	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr16	1343262	1343263	chr16:1343263:G:A	rs151054423	G	A	g	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	1343265	1343266	chr16:1343266:A:C	rs140321291	A	C	N	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	1343267	1343268	chr16:1343268:T:G	rs111931568	T	G	t	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	1904797	1904798	chr16:1904798:A:C	rs337284	A	C	-	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	2599834	2599835	chr16:2599835:T:G	rs113716221	T	G	t	Alx1.mouse_homeodomain_1	3	1	-	8.69757138156076	4.567158687630298	TCCAATTAAA
chr16	2823510	2823511	chr16:2823511:A:G	rs148081938	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	3031603	3031604	chr16:3031604:C:T	rs557310858	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr16	3075591	3075592	chr16:3075592:C:T	rs185329421	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr16	3619651	3619652	chr16:3619652:T:C	rs7187466	T	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	3637598	3637599	chr16:3637599:C:G	rs182468845	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	3943673	3943674	chr16:3943674:C:T	rs2601797	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	3962478	3962479	chr16:3962479:T:C	rs62036942	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr16	4200913	4200914	chr16:4200914:C:A	rs879151	C	A	A	Alx1.mouse_homeodomain_1	2	1	+	7.869260531930455	6.630446656150464	CCCAATTAAC
chr16	4240813	4240814	chr16:4240814:G:A	rs115133784	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr16	4384644	4384645	chr16:4384645:G:A	rs112517060	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	4426644	4426645	chr16:4426645:G:A	rs17137019	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	5323570	5323571	chr16:5323571:G:A	rs76890425	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr16	5364431	5364432	chr16:5364432:G:C	rs78108039	G	C	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	5527587	5527588	chr16:5527588:C:T	rs4786038	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	5527600	5527601	chr16:5527601:T:G	rs66535433	T	G	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr16	6044555	6044556	chr16:6044556:C:A	rs12926282	C	A	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	6345366	6345367	chr16:6345367:A:C	rs1420033	A	C	A	Alx1.mouse_homeodomain_1	7	1	+	8.497550136729574	5.219104253469473	TTTAATTACA
chr16	6361670	6361671	chr16:6361671:G:C	rs7187868	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	7.940983387749356	7.515710531479791	ACTAATTAGC
chr16	6481427	6481428	chr16:6481428:C:T	rs878012	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr16	6536622	6536623	chr16:6536623:C:T	rs78674506	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	6633676	6633677	chr16:6633677:T:G	rs72762959	T	G	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	6839673	6839674	chr16:6839674:T:G	rs35450617	T	G	T	Alx1.mouse_homeodomain_1	8	1	-	8.563873447197741	7.927930810407313	CTTAATTAAA
chr16	7172591	7172592	chr16:7172592:T:C	rs2061809	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr16	7443022	7443023	chr16:7443023:C:T	rs2109437	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.874801250211958	8.138185647757648	TTTAATTAAC
chr16	7487993	7487994	chr16:7487994:G:T	rs192624751	G	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	7561970	7561971	chr16:7561971:G:C	rs12932136	G	C	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr16	7745276	7745277	chr16:7745277:G:A	rs74331698	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr16	7843945	7843946	chr16:7843946:C:G	rs62019988	C	G	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	7866464	7866465	chr16:7866465:T:C	rs11645230	T	C	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	8021082	8021083	chr16:8021083:A:G	rs7206233	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr16	8127291	8127292	chr16:8127292:C:T	rs17745873	C	T	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr16	8127309	8127310	chr16:8127310:G:C	rs17745885	G	C	G	Alx1.mouse_homeodomain_1	0	1	-	7.233317895140026	6.465020910780744	CCCAATTACC
chr16	8326200	8326201	chr16:8326201:C:T	rs9921983	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	8679632	8679633	chr16:8679633:G:A	rs1477736211	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	8679633	8679634	chr16:8679634:G:T	rs1376051992	G	T	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	8728121	8728122	chr16:8728122:G:C	rs11645254	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	9096417	9096418	chr16:9096418:T:C	rs146449372	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	9099865	9099866	chr16:9099866:T:G	rs34932929	T	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr16	9165832	9165833	chr16:9165833:A:G	rs2941346	A	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	9270618	9270619	chr16:9270619:A:G	rs74554475	A	G	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	9519451	9519452	chr16:9519452:A:C	rs4781339	A	C	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr16	9977335	9977336	chr16:9977336:A:G	rs3104708	A	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr16	10067983	10067984	chr16:10067984:G:A	rs28581562	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr16	10121955	10121956	chr16:10121956:G:T	rs1868289	G	T	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	10294474	10294475	chr16:10294475:G:C	rs7199559	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.563442743761213	7.251265450265653	TCCAATTAGA
chr16	10489412	10489413	chr16:10489413:T:A	rs11645237	T	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr16	11418041	11418042	chr16:11418042:T:C	rs62023826	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	11571948	11571949	chr16:11571949:C:T	rs12325260	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr16	11611185	11611186	chr16:11611186:A:T	rs12928500	A	T	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	11727851	11727852	chr16:11727852:G:A	rs10492852	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	11781900	11781901	chr16:11781901:T:C	rs16958657	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	11781936	11781937	chr16:11781937:T:C	rs547411197	T	C	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	11918704	11918705	chr16:11918705:C:G	rs456325	C	G	c	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	11965682	11965683	chr16:11965683:C:T	rs11075036	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	12024567	12024568	chr16:12024568:A:G	rs145545649	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	9.551601409090008	3.624697421929944	TCTAATTAAA
chr16	12084939	12084940	chr16:12084940:C:T	rs2457193	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	12154473	12154474	chr16:12154474:T:A	rs6498266	T	A	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr16	12215675	12215676	chr16:12215676:G:A	rs112852065	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	12257396	12257397	chr16:12257397:G:A	rs9936260	G	A	g	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	12424589	12424590	chr16:12424590:C:A	rs12051092	C	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	12526971	12526972	chr16:12526972:G:A	rs190013	G	A	a	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr16	12573792	12573793	chr16:12573793:G:C	rs535100363	G	C	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	12576230	12576231	chr16:12576231:G:C	rs11647633	G	C	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	12766374	12766375	chr16:12766375:A:C	rs12598406	A	C	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr16	12898346	12898347	chr16:12898347:T:C	rs1433746	T	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	12906415	12906416	chr16:12906416:A:C	rs751349658	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.589161921660155	3.774029528776218	CCTAATTAGC
chr16	13421613	13421614	chr16:13421614:A:G	rs12447179	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	13781505	13781506	chr16:13781506:T:C	rs16962879	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr16	13923945	13923946	chr16:13923946:G:T	chr16:13923946:G:T	G	T	G	Alx1.mouse_homeodomain_1	9	1	+	8.16388906539059	7.852546319205846	CCTAATTAGG
chr16	14036903	14036904	chr16:14036904:T:C	rs12920252	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	14912219	14912220	chr16:14912220:C:T	rs866041299	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	14978575	14978576	chr16:14978576:C:T	rs4985128	C	T	.	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	15418464	15418465	chr16:15418465:A:G	rs72774864	A	G	.	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	15551142	15551143	chr16:15551143:C:T	rs62036868	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	15808732	15808733	chr16:15808733:A:T	rs9972711	A	T	a	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	16938300	16938301	chr16:16938301:C:G	rs28620738	C	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr16	17237538	17237539	chr16:17237539:A:G	rs113025605	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.497550136729574	7.643520109200326	TTTAATTACA
chr16	17238707	17238708	chr16:17238708:G:A	rs79385228	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	17392955	17392956	chr16:17392956:G:A	rs34770254	G	A	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr16	17508496	17508497	chr16:17508497:G:A	rs8048840	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr16	17508526	17508527	chr16:17508527:C:T	rs57724628	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	17508527	17508528	chr16:17508528:G:A	rs74881950	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	17969299	17969300	chr16:17969300:T:G	rs367898840	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.23885861342153	4.960412730161428	TTTAATTACC
chr16	18335489	18335490	chr16:18335490:A:G	rs75305005	A	G	a	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	18335495	18335496	chr16:18335496:G:A	rs62043972	G	A	g	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	18791146	18791147	chr16:18791147:C:T	rs1969062	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	19143453	19143454	chr16:19143454:T:C	rs78638093	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	19601569	19601570	chr16:19601570:C:T	rs55755551	C	T	c	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	20051556	20051557	chr16:20051557:G:A	rs12924533	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	20249272	20249273	chr16:20249273:A:C	rs59673987	A	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	20323356	20323357	chr16:20323357:C:T	rs4411505	C	T	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr16	20432267	20432268	chr16:20432268:T:A	rs34317321	T	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr16	21076173	21076174	chr16:21076174:G:A	rs2639781	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr16	21161563	21161564	chr16:21161564:C:T	rs117918835	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	21627146	21627147	chr16:21627147:T:A	rs3743703	T	A	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	22191808	22191809	chr16:22191809:G:A	rs544057713	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	22193296	22193297	chr16:22193297:A:T	rs11642518	A	T	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	22193297	22193298	chr16:22193298:A:T	rs11074505	A	T	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	22369826	22369827	chr16:22369827:T:C	rs77016145	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr16	22373582	22373583	chr16:22373583:T:C	rs185270529	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.061628744770331	3.0899490917495904	TCCAATTACA
chr16	22648028	22648029	chr16:22648029:C:T	rs13333600	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	22667996	22667997	chr16:22667997:A:T	rs9989411	A	T	A	Alx1.mouse_homeodomain_1	2	1	-	8.74067261241241	6.647828709103172	TTTAATTAGC
chr16	22721475	22721476	chr16:22721476:C:T	rs537931031	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr16	23642657	23642658	chr16:23642658:T:A	rs459603	T	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	23831392	23831393	chr16:23831393:A:T	rs528067171	A	T	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	24382973	24382974	chr16:24382974:C:T	rs7198473	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	24765188	24765189	chr16:24765189:T:C	rs12598296	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr16	25288197	25288198	chr16:25288198:C:T	rs13330567	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	25854403	25854404	chr16:25854404:C:T	rs4622515	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	26567412	26567413	chr16:26567413:A:G	rs2520124	A	G	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	26592506	26592507	chr16:26592507:C:T	rs71384884	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	27547237	27547238	chr16:27547238:G:C	rs4787967	G	C	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	27707211	27707212	chr16:27707212:A:G	rs571017305	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	27812631	27812632	chr16:27812632:G:A	rs79989774	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr16	27815738	27815739	chr16:27815739:A:G	rs1709783	A	G	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	28015352	28015353	chr16:28015353:T:A	rs12921785	T	A	T	Alx1.mouse_homeodomain_1	2	1	+	8.74067261241241	6.647828709103172	TTTAATTAGC
chr16	28579540	28579541	chr16:28579541:C:T	rs112047757	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	29120531	29120532	chr16:29120532:T:A	rs1646177	T	A	.	Alx1.mouse_homeodomain_1	7	1	-	9.551601409090008	6.833606386882752	TCTAATTAAA
chr16	29187932	29187933	chr16:29187933:T:C	rs200039374	T	C	.	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	29871168	29871169	chr16:29871169:C:T	rs12917712	C	T	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr16	30811087	30811088	chr16:30811088:G:A	rs13337900	G	A	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	31198361	31198362	chr16:31198362:G:T	rs141213167	G	T	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	31350666	31350667	chr16:31350667:G:A	rs4493054	G	A	a	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	31386906	31386907	chr16:31386907:G:A	rs145988221	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	34587313	34587314	chr16:34587314:T:C	rs1466023387	T	C	.	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr16	34587346	34587347	chr16:34587347:A:G	chr16:34587347:A:G	A	G	.	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	34593188	34593189	chr16:34593189:A:T	chr16:34593189:A:T	A	T	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	35687209	35687210	chr16:35687210:G:A	rs60510786	G	A	g	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	35693436	35693437	chr16:35693437:C:A	rs76186818	C	A	c	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr16	35694534	35694535	chr16:35694535:A:G	rs11863543	A	G	g	Alx1.mouse_homeodomain_1	7	1	+	8.69757138156076	2.770667394400697	TCCAATTAAA
chr16	35727461	35727462	chr16:35727462:G:T	rs74834126	G	T	g	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	48589627	48589628	chr16:48589628:C:T	rs9931737	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	7.9549935751004215	7.218377972646112	GCTAATTAAC
chr16	48592114	48592115	chr16:48592115:C:T	rs77702353	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr16	48680608	48680609	chr16:48680609:C:G	rs11076578	C	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	48680648	48680649	chr16:48680649:A:G	rs182424168	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr16	48959150	48959151	chr16:48959151:G:T	rs11642355	G	T	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr16	49027988	49027989	chr16:49027989:G:A	rs75948426	G	A	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	49357381	49357382	chr16:49357382:G:T	rs62029090	G	T	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	49475017	49475018	chr16:49475018:G:C	rs74737709	G	C	g	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr16	49724682	49724683	chr16:49724683:C:T	rs6500244	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	50097022	50097023	chr16:50097023:C:T	rs150567277	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr16	50448766	50448767	chr16:50448767:A:G	rs57733583	A	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr16	50642602	50642603	chr16:50642603:G:A	rs7199150	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	50668459	50668460	chr16:50668460:G:A	rs73575711	G	A	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	50741221	50741222	chr16:50741222:A:G	chr16:50741222:A:G	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr16	50741231	50741232	chr16:50741232:C:G	chr16:50741232:C:G	C	G	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr16	51093976	51093977	chr16:51093977:A:G	rs7204514	A	G	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	51129208	51129209	chr16:51129209:G:C	rs35084376	G	C	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr16	51592238	51592239	chr16:51592239:C:G	rs1498787	C	G	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr16	51597293	51597294	chr16:51597294:G:C	rs1498765	G	C	g	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	52067451	52067452	chr16:52067452:C:T	rs1592488	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.556294283327654	8.138185647757648	TCTAATTAAT
chr16	52251745	52251746	chr16:52251746:T:C	rs67753568	T	C	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr16	52491372	52491373	chr16:52491373:C:T	rs1978343	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr16	52501897	52501898	chr16:52501898:T:C	rs4784220	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	52585040	52585041	chr16:52585041:C:T	rs11645620	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	52826238	52826239	chr16:52826239:C:T	rs56118122	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr16	53019085	53019086	chr16:53019086:C:G	rs34470004	C	G	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	53154608	53154609	chr16:53154609:A:G	rs60593136	A	G	A	Alx1.mouse_homeodomain_1	9	1	-	8.556294283327654	9.292909885781963	TCTAATTAAT
chr16	53323652	53323653	chr16:53323653:C:G	chr16:53323653:C:G	C	G	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr16	53598673	53598674	chr16:53598674:T:C	rs16952347	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr16	53717633	53717634	chr16:53717634:T:C	rs78974229	T	C	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	54116495	54116496	chr16:54116496:T:A	rs714461	T	A	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	54172550	54172551	chr16:54172551:A:G	rs59046992	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	54255444	54255445	chr16:54255445:C:G	rs8057140	C	G	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	54519237	54519238	chr16:54519238:T:C	rs7202749	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	7.49200941844807	1.565105431288007	CCCAATTACA
chr16	54519242	54519243	chr16:54519243:G:A	rs7195748	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.49200941844807	8.346039445977318	CCCAATTACA
chr16	54827424	54827425	chr16:54827425:T:G	rs4377152	T	G	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	54946021	54946022	chr16:54946022:C:T	rs138774008	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr16	55082520	55082521	chr16:55082521:C:T	rs542715301	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	55152068	55152069	chr16:55152069:A:T	rs75631051	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	8.087347922669274	5.369352900462017	CCTAATTACC
chr16	55274037	55274038	chr16:55274038:T:C	rs8045188	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr16	55437950	55437951	chr16:55437951:G:A	rs78302600	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	55439563	55439564	chr16:55439564:A:G	rs2247258	A	G	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	55451772	55451773	chr16:55451773:T:G	rs1030867	T	G	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	55451776	55451777	chr16:55451777:G:A	rs72808996	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	55494246	55494247	chr16:55494247:G:A	rs243840	G	A	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr16	55710734	55710735	chr16:55710735:T:G	rs12596924	T	G	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr16	55760536	55760537	chr16:55760537:T:C	rs3815576	T	C	-	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr16	55909554	55909555	chr16:55909555:A:T	rs72810532	A	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	56174330	56174331	chr16:56174331:T:C	rs7187026	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr16	56620491	56620492	chr16:56620492:T:A	rs12923959	T	A	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	56629444	56629445	chr16:56629445:C:T	rs9932570	C	T	.	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr16	57310377	57310378	chr16:57310378:G:A	rs144889122	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.886642584883163	7.150026982428854	TTCAATTAGC
chr16	57642988	57642989	chr16:57642989:G:A	rs17325839	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr16	57801713	57801714	chr16:57801714:C:T	rs115547443	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr16	57885129	57885130	chr16:57885130:C:T	rs11643127	C	T	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	57887061	57887062	chr16:57887062:A:C	rs3784891	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	57932722	57932723	chr16:57932723:G:A	rs111261915	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	58686961	58686962	chr16:58686962:G:T	rs112643426	G	T	g	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	58848592	58848593	chr16:58848593:G:A	rs972702896	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.087347922669274	7.350732320214965	CCTAATTACC
chr16	58947564	58947565	chr16:58947565:A:T	rs36081964	A	T	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	59330288	59330289	chr16:59330289:C:T	rs17258178	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	60582774	60582775	chr16:60582775:A:G	rs60653979	A	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	62226059	62226060	chr16:62226060:C:A	rs58987471	C	A	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	63144445	63144446	chr16:63144446:T:C	rs146045759	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.075112025548904	7.221081998019657	ACTAATTAAC
chr16	63697697	63697698	chr16:63697698:C:T	rs56078845	C	T	c	Alx1.mouse_homeodomain_1	9	1	+	8.656967248991535	7.920351646537226	TCTAATTACC
chr16	63789773	63789774	chr16:63789774:T:C	rs35574	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr16	64490049	64490050	chr16:64490050:A:G	rs13337190	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr16	64498473	64498474	chr16:64498474:A:G	rs59367532	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	64572856	64572857	chr16:64572857:T:G	rs115462358	T	G	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	64784925	64784926	chr16:64784926:C:A	rs62039958	C	A	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr16	64820277	64820278	chr16:64820278:A:G	rs62044495	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr16	65016488	65016489	chr16:65016489:A:G	rs35176	A	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr16	65033092	65033093	chr16:65033093:C:T	rs8051995	C	T	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	65281517	65281518	chr16:65281518:A:G	rs12930457	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr16	65414175	65414176	chr16:65414176:T:G	rs818415	T	G	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr16	65667096	65667097	chr16:65667097:G:A	rs55990266	G	A	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	65757623	65757624	chr16:65757624:T:C	rs11644732	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	65773439	65773440	chr16:65773440:G:C	rs1075055	G	C	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr16	65856024	65856025	chr16:65856025:T:C	rs1030264740	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	66175903	66175904	chr16:66175904:C:T	rs235111	C	T	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	66188992	66188993	chr16:66188993:T:C	rs58571355	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	66381410	66381411	chr16:66381411:C:T	rs7403990	C	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	66381455	66381456	chr16:66381456:A:C	rs72786453	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	66669456	66669457	chr16:66669457:A:G	rs148279214	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr16	67258046	67258047	chr16:67258047:C:T	rs533397260	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	67356638	67356639	chr16:67356639:T:A	rs78540639	T	A	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr16	68085112	68085113	chr16:68085113:C:T	rs565392843	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	68527336	68527337	chr16:68527337:G:A	rs698713	G	A	g	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr16	68937155	68937156	chr16:68937156:G:A	rs8054930	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	69130203	69130204	chr16:69130204:A:T	rs72789240	A	T	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.6228028348228563	TCCAATTAAA
chr16	69370337	69370338	chr16:69370338:G:A	rs12325060	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr16	69475602	69475603	chr16:69475603:A:G	rs11641710	A	G	g	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	69718059	69718060	chr16:69718060:G:A	rs370977215	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.589161921660155	9.158781247982416	CCTAATTAGC
chr16	70643516	70643517	chr16:70643517:C:T	rs34426756	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	70700466	70700467	chr16:70700467:C:T	rs139159999	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	70713465	70713466	chr16:70713466:G:A	rs79489174	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr16	71251058	71251059	chr16:71251059:C:G	rs108832	C	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	71343407	71343408	chr16:71343408:G:A	rs35593117	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	71386673	71386674	chr16:71386674:T:A	rs12597949	T	A	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	71927631	71927632	chr16:71927632:A:C	rs79258602	A	C	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr16	72019241	72019242	chr16:72019242:T:C	rs10048111	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr16	72150059	72150060	chr16:72150060:G:A	rs10852511	G	A	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	72167300	72167301	chr16:72167301:T:C	rs17667675	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	72203635	72203636	chr16:72203636:T:G	rs12447857	T	G	T	Alx1.mouse_homeodomain_1	0	1	+	8.570744477099081	7.232828166417539	TCTAATTATA
chr16	72455514	72455515	chr16:72455515:C:T	rs7199954	C	T	c	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr16	72578948	72578949	chr16:72578949:C:A	rs8046749	C	A	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	73329414	73329415	chr16:73329415:C:T	rs62057270	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	73356384	73356385	chr16:73356385:A:C	rs8051795	A	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr16	73356402	73356403	chr16:73356403:T:C	rs8056907	T	C	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	73543524	73543525	chr16:73543525:G:T	chr16:73543525:G:T	G	T	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	73659363	73659364	chr16:73659364:T:A	rs987884	T	A	T	Alx1.mouse_homeodomain_1	0	1	+	9.551601409090008	8.333803548856949	TCTAATTAAA
chr16	74438647	74438648	chr16:74438648:G:T	rs11149710	G	T	.	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr16	74438685	74438686	chr16:74438686:C:T	rs12444150	C	T	.	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	74578131	74578132	chr16:74578132:G:C	rs8056718	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	9.551601409090008	8.239424115594447	TCTAATTAAA
chr16	74616093	74616094	chr16:74616094:G:T	rs6564149	G	T	g	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	75090879	75090880	chr16:75090880:G:A	rs147882572	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	75118927	75118928	chr16:75118928:A:C	rs1820217	A	C	C	Alx1.mouse_homeodomain_1	8	1	-	8.312052953791037	9.158781247982416	TCTAATTATC
chr16	75148190	75148191	chr16:75148191:A:C	rs11648221	A	C	c	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	75288587	75288588	chr16:75288588:C:G	rs8055098	C	G	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	75376899	75376900	chr16:75376900:C:A	rs8056080	C	A	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr16	75389050	75389051	chr16:75389051:G:A	rs59800961	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	75402332	75402333	chr16:75402333:A:T	rs4888409	A	T	T	Alx1.mouse_homeodomain_1	5	1	-	8.1279520552385	2.703970258022144	CCCAATTAAA
chr16	75801546	75801547	chr16:75801547:G:A	rs74024829	G	A	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr16	76208531	76208532	chr16:76208532:A:T	rs8052613	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	8.061628744770331	2.6376469475539768	TCCAATTACA
chr16	76265673	76265674	chr16:76265674:C:G	rs17640915	C	G	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr16	76265680	76265681	chr16:76265681:C:T	rs76127457	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr16	76520589	76520590	chr16:76520590:C:T	rs12596018	C	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr16	76531629	76531630	chr16:76531630:C:T	rs116575143	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr16	76547935	76547936	chr16:76547936:A:G	rs7187962	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	76900874	76900875	chr16:76900875:G:C	rs4888565	G	C	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr16	76967715	76967716	chr16:76967716:T:A	rs150376783	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	7.879478364183603	5.161483341976348	TCCAATTAGG
chr16	77393989	77393990	chr16:77393990:T:G	rs9934527	T	G	G	Alx1.mouse_homeodomain_1	3	1	-	8.563442743761213	4.433030049830751	TCCAATTAGA
chr16	77503595	77503596	chr16:77503596:C:T	rs13336130	C	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	77503596	77503597	chr16:77503597:G:A	rs1239874241	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	77571547	77571548	chr16:77571548:G:A	rs9926916	G	A	g	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	77594435	77594436	chr16:77594436:A:G	rs1839256	A	G	T	Alx1.mouse_homeodomain_1	7	1	+	8.981982082767747	3.055078095607683	CCTAATTAAA
chr16	77721581	77721582	chr16:77721582:C:A	rs11863999	C	A	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr16	77739512	77739513	chr16:77739513:A:C	rs9652677	A	C	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr16	77947230	77947231	chr16:77947231:G:C	rs10454707	G	C	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr16	78071468	78071469	chr16:78071469:T:C	rs12925573	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr16	78098376	78098377	chr16:78098377:T:C	rs10220974	T	C	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr16	78138276	78138277	chr16:78138277:A:G	rs9935941	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	3.2065887863599385	TTTAATTAAA
chr16	78213819	78213820	chr16:78213820:A:G	rs181015173	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.879478364183603	2.907798711162862	TCCAATTAGG
chr16	78236180	78236181	chr16:78236181:C:T	rs16947307	C	T	c	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr16	78292456	78292457	chr16:78292457:C:G	rs11150054	C	G	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	78364370	78364371	chr16:78364371:C:G	rs4077864	C	G	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	78611121	78611122	chr16:78611122:T:C	rs62037152	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr16	78781082	78781083	chr16:78781083:C:G	rs1072898	C	G	G	Alx1.mouse_homeodomain_1	9	1	+	8.087347922669274	7.662075066399709	CCTAATTACC
chr16	79001090	79001091	chr16:79001091:A:G	rs112123364	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	79008876	79008877	chr16:79008877:G:T	rs889745	G	T	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	79018556	79018557	chr16:79018557:C:G	rs9932373	C	G	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	79138747	79138748	chr16:79138748:T:C	rs9930659	T	C	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	79218753	79218754	chr16:79218754:A:G	rs270422	A	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	79287569	79287570	chr16:79287570:C:T	rs73571317	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	79418483	79418484	chr16:79418484:G:A	rs7499736	G	A	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr16	79836879	79836880	chr16:79836880:G:C	rs7190320	G	C	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	79848428	79848429	chr16:79848429:C:T	rs11641099	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	79971197	79971198	chr16:79971198:A:C	rs4344763	A	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr16	80284977	80284978	chr16:80284978:A:T	rs11648419	A	T	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr16	80286158	80286159	chr16:80286159:T:C	rs1401202	T	C	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	80380714	80380715	chr16:80380715:T:C	rs1384995	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	80498727	80498728	chr16:80498728:A:G	rs11859045	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr16	80498740	80498741	chr16:80498741:A:C	rs55863307	A	C	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	80650268	80650269	chr16:80650269:T:C	rs10871391	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	80988204	80988205	chr16:80988205:T:C	rs2123626	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr16	80988210	80988211	chr16:80988211:C:A	rs2123627	C	A	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr16	80998044	80998045	chr16:80998045:T:G	rs2549865	T	G	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	81152078	81152079	chr16:81152079:G:A	rs8059559	G	A	g	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr16	81210896	81210897	chr16:81210897:G:A	rs12596232	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	81551367	81551368	chr16:81551368:A:G	rs565390040	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.8208649373008745	2.849185284280132	GCTAATTAGC
chr16	81666699	81666700	chr16:81666700:C:T	rs4539589	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	81942788	81942789	chr16:81942789:G:A	rs11639666	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	82005088	82005089	chr16:82005089:A:G	rs187869070	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	3.156272402217758	CCCAATTAAA
chr16	82043974	82043975	chr16:82043975:T:C	rs138259026	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr16	82109172	82109173	chr16:82109173:T:C	rs11639839	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr16	82150361	82150362	chr16:82150362:C:G	rs7191678	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	82171425	82171426	chr16:82171426:T:C	rs2911378	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr16	82341024	82341025	chr16:82341025:C:G	rs902544	C	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	82547536	82547537	chr16:82547537:C:G	rs8044937	C	G	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	82653961	82653962	chr16:82653962:G:A	rs116495809	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr16	82653967	82653968	chr16:82653968:A:G	rs28751987	A	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr16	82653969	82653970	chr16:82653970:A:G	rs28439212	A	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr16	82729078	82729079	chr16:82729079:A:G	rs36069302	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr16	82808013	82808014	chr16:82808014:T:A	rs72805979	T	A	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr16	82845738	82845739	chr16:82845739:A:T	rs4782734	A	T	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	83390767	83390768	chr16:83390768:G:T	rs1424176	G	T	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	83390774	83390775	chr16:83390775:T:A	rs1424177	T	A	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	83420245	83420246	chr16:83420246:A:G	rs10514573	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	83474149	83474150	chr16:83474150:A:T	chr16:83474150:A:T	A	T	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr16	83514294	83514295	chr16:83514295:A:T	rs4583231	A	T	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr16	83608811	83608812	chr16:83608812:T:A	rs116844947	T	A	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	83649475	83649476	chr16:83649476:C:T	rs76194283	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr16	83649476	83649477	chr16:83649477:G:A	rs12933060	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr16	83675234	83675235	chr16:83675235:C:G	rs6563964	C	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr16	83808503	83808504	chr16:83808504:C:G	rs544448610	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	8.563442743761213	8.061628744770331	TCCAATTAGA
chr16	83808518	83808519	chr16:83808519:G:A	rs187219436	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	83975796	83975797	chr16:83975797:T:C	rs2247470	T	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	83975901	83975902	chr16:83975902:G:C	rs77175791	G	C	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	84302308	84302309	chr16:84302309:G:A	rs244836	G	A	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	84592197	84592198	chr16:84592198:T:C	rs17826353	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	84594535	84594536	chr16:84594536:C:T	rs941725640	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	84735869	84735870	chr16:84735870:C:T	rs563833599	C	T	c	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr16	84759517	84759518	chr16:84759518:G:A	rs76029916	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr16	84979907	84979908	chr16:84979908:C:T	rs12447590	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr16	85086942	85086943	chr16:85086943:G:A	rs146370127	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	85086948	85086949	chr16:85086949:C:T	rs72805499	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	85127338	85127339	chr16:85127339:C:T	rs8050749	C	T	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr16	85127347	85127348	chr16:85127348:A:G	rs62048583	A	G	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr16	85128381	85128382	chr16:85128382:T:A	rs78775859	T	A	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	85168937	85168938	chr16:85168938:T:C	rs571487344	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	7.309859037861343	1.3829550507012782	CCCAATTAGG
chr16	85246593	85246594	chr16:85246594:G:A	rs4073556	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr16	85263094	85263095	chr16:85263095:A:T	rs11864292	A	T	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr16	85335091	85335092	chr16:85335092:C:T	rs74405358	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr16	85380694	85380695	chr16:85380695:G:A	rs143448058	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	85445243	85445244	chr16:85445244:C:T	rs145193691	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr16	85462599	85462600	chr16:85462600:T:G	chr16:85462600:T:G	T	G	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr16	85485721	85485722	chr16:85485722:C:T	rs112881686	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr16	85545416	85545417	chr16:85545417:T:G	rs4843463	T	G	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr16	85575105	85575106	chr16:85575106:A:G	rs115112264	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	85588418	85588419	chr16:85588419:G:A	rs144741529	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr16	85614362	85614363	chr16:85614363:A:T	rs1012139501	A	T	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	85909859	85909860	chr16:85909860:T:C	rs305077	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	85949719	85949720	chr16:85949720:T:G	rs8062690	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	7.735131894130908	4.456686010870808	CCCAATTAGC
chr16	86118812	86118813	chr16:86118813:A:G	rs9927259	A	G	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	86121322	86121323	chr16:86121323:T:C	rs16944689	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	86272577	86272578	chr16:86272578:C:T	rs4843926	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr16	86317238	86317239	chr16:86317239:G:A	rs201564255	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	86369947	86369948	chr16:86369948:T:A	rs1552655	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr16	86383639	86383640	chr16:86383640:A:G	rs58863524	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	86383655	86383656	chr16:86383656:A:G	rs1728387	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr16	86593997	86593998	chr16:86593998:A:G	rs34968499	A	G	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr16	86593999	86594000	chr16:86594000:G:A	rs1895519	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.304751220453168	7.568135617998859	TCCAATTAGC
chr16	86681085	86681086	chr16:86681086:C:T	rs1272607774	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr16	86738270	86738271	chr16:86738271:A:G	rs9931371	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr16	86761937	86761938	chr16:86761938:C:G	rs116015612	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	7.846603954486855	7.344789955495973	TGTAATTAGC
chr16	86772713	86772714	chr16:86772714:C:A	rs73267042	C	A	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	86825072	86825073	chr16:86825073:T:G	rs115595161	T	G	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	87031741	87031742	chr16:87031742:C:A	rs75848718	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	87301425	87301426	chr16:87301426:A:G	rs12934444	A	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr16	87518542	87518543	chr16:87518543:C:G	rs111406831	C	G	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	87853227	87853228	chr16:87853228:C:T	rs77295914	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	87864934	87864935	chr16:87864935:G:A	rs111880212	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr16	88073905	88073906	chr16:88073906:T:C	rs4075598	T	C	t	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr16	88152656	88152657	chr16:88152657:C:A	rs150705638	C	A	-	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	88154000	88154001	chr16:88154001:C:G	rs9922902	C	G	-	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr16	88715382	88715383	chr16:88715383:A:C	rs1061247	A	C	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr16	88760836	88760837	chr16:88760837:G:A	rs78777782	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	88760837	88760838	chr16:88760838:A:T	rs114896324	A	T	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	88809487	88809488	chr16:88809488:T:C	rs1184700495	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr16	88809519	88809520	chr16:88809520:T:C	rs4695	T	C	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	89118708	89118709	chr16:89118709:T:C	rs36075163	T	C	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	89361140	89361141	chr16:89361141:G:C	rs3114870	G	C	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr16	90066032	90066033	chr16:90066033:C:T	rs55745223	C	T	.	Alx1.mouse_homeodomain_1	9	1	-	7.879478364183603	8.563442743761213	TCCAATTAGG
chr17	227947	227948	chr17:227948:G:A	rs528117058	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr17	263598	263599	chr17:263599:C:T	rs4985594	C	T	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	349255	349256	chr17:349256:G:A	rs11871110	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	365102	365103	chr17:365103:A:T	rs4985605	A	T	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr17	797652	797653	chr17:797653:T:C	rs145864290	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.981982082767747	8.8478534449682	CCTAATTAAA
chr17	1234531	1234532	chr17:1234532:T:C	rs28617505	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	8.279462745990756	TTTAATTAAA
chr17	1276402	1276403	chr17:1276403:C:A	rs965797430	C	A	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr17	1276405	1276406	chr17:1276406:C:T	rs577637884	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr17	1322645	1322646	chr17:1322646:T:G	rs2361573	T	G	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr17	1796787	1796788	chr17:1796788:T:C	rs5005394	T	C	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr17	1852917	1852918	chr17:1852918:G:A	rs3815611	G	A	g	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	2191910	2191911	chr17:2191911:C:T	rs572729769	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr17	2240910	2240911	chr17:2240911:G:A	rs118075173	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	7.662075066399709	7.317160771199211	CCTAATTACG
chr17	2307706	2307707	chr17:2307707:G:A	rs116875739	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr17	2399952	2399953	chr17:2399953:C:T	chr17:2399953:C:T	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	2486199	2486200	chr17:2486200:A:G	rs4319810	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	3496400	3496401	chr17:3496401:C:T	rs11868193	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr17	3643891	3643892	chr17:3643892:T:C	rs224499	T	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr17	3693191	3693192	chr17:3693192:A:C	rs12450224	A	C	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr17	3783958	3783959	chr17:3783959:G:A	rs73318162	G	A	g	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	3802172	3802173	chr17:3802173:A:G	rs191497175	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	4116734	4116735	chr17:4116735:T:C	rs62071007	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	9.292909885781963	4.321230232761221	TCTAATTAAC
chr17	4136660	4136661	chr17:4136661:T:C	rs8070665	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	4569878	4569879	chr17:4569879:C:A	rs76675480	C	A	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr17	5710288	5710289	chr17:5710289:T:C	rs2109610	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	5789630	5789631	chr17:5789631:A:C	rs8081807	A	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr17	6021475	6021476	chr17:6021476:G:A	rs62057041	G	A	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr17	6331226	6331227	chr17:6331227:T:C	rs66999587	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	6361896	6361897	chr17:6361897:G:A	rs74681041	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	6489122	6489123	chr17:6489123:C:T	rs17202180	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr17	6570887	6570888	chr17:6570888:G:A	rs79629169	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr17	6749676	6749677	chr17:6749677:A:G	rs1567347	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	7309177	7309178	chr17:7309178:A:C	rs1052368349	A	C	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	7499896	7499897	chr17:7499897:G:A	rs8067489	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr17	8105974	8105975	chr17:8105975:G:A	chr17:8105975:G:A	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr17	8106012	8106013	chr17:8106013:A:C	rs7211097	A	C	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	8106018	8106019	chr17:8106019:G:T	rs7209343	G	T	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	8247152	8247153	chr17:8247153:C:T	chr17:8247153:C:T	C	T	c	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr17	8295882	8295883	chr17:8295883:T:G	rs115521890	T	G	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr17	8500006	8500007	chr17:8500007:A:G	rs7213261	A	G	a	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr17	8500008	8500009	chr17:8500009:T:C	rs7217409	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr17	9025093	9025094	chr17:9025094:T:G	rs1473664	T	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr17	9109350	9109351	chr17:9109351:A:G	rs74932871	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr17	9409799	9409800	chr17:9409800:A:G	rs144581334	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	9455910	9455911	chr17:9455911:C:T	rs9903869	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	9615751	9615752	chr17:9615752:G:T	rs8067557	G	T	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr17	9918870	9918871	chr17:9918871:T:C	rs9895972	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.298017703190137	3.326338050169395	CCTAATTAAG
chr17	10114627	10114628	chr17:10114628:A:G	rs926387060	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	8.304751220453168	3.3330715674324276	TCCAATTAGC
chr17	10174418	10174419	chr17:10174419:G:A	rs58595251	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr17	10183026	10183027	chr17:10183027:G:C	rs11656779	G	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr17	10371971	10371972	chr17:10371972:G:T	rs62058110	G	T	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	10583410	10583411	chr17:10583411:C:T	rs12941125	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr17	10657442	10657443	chr17:10657443:G:A	rs201615	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr17	10698508	10698509	chr17:10698509:A:G	rs2520168	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.312052953791037	3.3403733007702945	TCTAATTATC
chr17	10749006	10749007	chr17:10749007:C:T	rs4792025	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr17	11690966	11690967	chr17:11690967:T:C	rs7207235	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	12509867	12509868	chr17:12509868:A:G	rs237361	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr17	12666008	12666009	chr17:12666009:G:C	rs565175231	G	C	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	12985499	12985500	chr17:12985500:C:T	rs137892648	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	13184970	13184971	chr17:13184971:G:A	rs9909331	G	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	13195131	13195132	chr17:13195132:G:A	rs2040642	G	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	13404705	13404706	chr17:13404706:G:C	rs78872739	G	C	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr17	13869434	13869435	chr17:13869435:T:C	rs7220601	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	8.1279520552385	5.521132165389809	CCCAATTAAA
chr17	15453416	15453417	chr17:15453417:T:C	rs3803841	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	16965246	16965247	chr17:16965247:C:T	rs7226097	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr17	17071687	17071688	chr17:17071688:T:G	rs73979060	T	G	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr17	17331325	17331326	chr17:17331326:G:A	rs56383549	G	A	-	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	17457822	17457823	chr17:17457823:T:C	rs1269402	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr17	17930804	17930805	chr17:17930805:A:G	rs8068820	A	G	A	Alx1.mouse_homeodomain_1	9	1	-	7.852546319205846	8.589161921660155	CCTAATTAGT
chr17	17940661	17940662	chr17:17940662:G:T	rs115790948	G	T	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	18009742	18009743	chr17:18009743:T:C	rs6502632	T	C	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	18208029	18208030	chr17:18208030:A:T	rs9913262	A	T	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	18894023	18894024	chr17:18894024:A:G	rs67411574	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	7.940983387749356	2.9532614714803755	ACTAATTAGC
chr17	18917143	18917144	chr17:18917144:C:T	rs8070707	C	T	c	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr17	19286297	19286298	chr17:19286298:T:G	rs4924972	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	7.869260531930455	3.054128139046518	CCCAATTAAC
chr17	20064448	20064449	chr17:20064449:G:A	rs35191778	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	20080377	20080378	chr17:20080378:T:G	rs16960678	T	G	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	20082727	20082728	chr17:20082728:T:C	rs7210439	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	20226177	20226178	chr17:20226178:A:G	rs16960730	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	20889682	20889683	chr17:20889683:T:C	rs191342133	T	C	.	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr17	21115184	21115185	chr17:21115185:C:A	rs56334325	C	A	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr17	21201817	21201818	chr17:21201818:G:A	rs59916519	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	21310940	21310941	chr17:21310941:G:A	rs6587138	G	A	g	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	21312981	21312982	chr17:21312982:A:C	rs4985838	A	C	c	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	21681219	21681220	chr17:21681220:G:A	rs1334972809	G	A	.	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	21681228	21681229	chr17:21681229:C:G	rs950041733	C	G	.	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	21681228	21681229	chr17:21681229:C:T	chr17:21681229:C:T	C	T	.	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	21723529	21723530	chr17:21723530:T:A	rs879120257	T	A	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr17	21767586	21767587	chr17:21767587:C:T	rs1287973574	C	T	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	21840903	21840904	chr17:21840904:T:A	rs1253201624	T	A	.	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr17	22145034	22145035	chr17:22145035:G:C	rs78749050	G	C	.	Alx1.mouse_homeodomain_1	9	1	-	7.9549935751004215	7.529720718830856	GCTAATTAAC
chr17	22145053	22145054	chr17:22145054:A:G	rs77846327	A	G	.	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	26782411	26782412	chr17:26782412:G:A	rs1198556102	G	A	N	Alx1.mouse_homeodomain_1	8	1	+	7.309859037861343	7.44398767566089	CCCAATTAGG
chr17	27207080	27207081	chr17:27207081:G:T	rs4795516	G	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	27380542	27380543	chr17:27380543:A:C	chr17:27380543:A:C	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	27985441	27985442	chr17:27985442:A:G	rs4239213	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr17	28112719	28112720	chr17:28112720:A:G	rs79465105	A	G	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	28171021	28171022	chr17:28171022:T:C	rs2125846	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr17	28501219	28501220	chr17:28501220:C:T	rs117004690	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	28720991	28720992	chr17:28720992:G:A	rs116695640	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr17	28893565	28893566	chr17:28893566:G:C	rs115440470	G	C	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr17	28925970	28925971	chr17:28925971:C:T	rs11652544	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	29240798	29240799	chr17:29240799:C:T	rs7226022	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	29357560	29357561	chr17:29357561:C:T	rs12946125	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr17	29710904	29710905	chr17:29710905:T:C	rs2874505	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr17	30095499	30095500	chr17:30095500:C:T	rs28368875	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	30236480	30236481	chr17:30236481:T:A	rs2020932	T	A	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	30733151	30733152	chr17:30733152:A:G	rs56095789	A	G	.	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	31390408	31390409	chr17:31390409:G:A	rs113297709	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	31401265	31401266	chr17:31401266:T:C	rs7223589	T	C	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	31469295	31469296	chr17:31469296:C:T	rs178889	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	31916563	31916564	chr17:31916564:C:A	rs2344312	C	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	31916573	31916574	chr17:31916574:A:G	rs9892937	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	8.874801250211958	8.74067261241241	TTTAATTAAC
chr17	31916587	31916588	chr17:31916588:C:A	rs9892109	C	A	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr17	32154944	32154945	chr17:32154945:G:A	rs72825788	G	A	g	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	32463367	32463368	chr17:32463368:T:A	rs11657826	T	A	t	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr17	32557009	32557010	chr17:32557010:A:G	rs225183	A	G	G	Alx1.mouse_homeodomain_1	9	1	+	8.1279520552385	7.44398767566089	CCCAATTAAA
chr17	32591438	32591439	chr17:32591439:A:G	rs11080182	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	32962225	32962226	chr17:32962226:C:T	rs28915	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr17	32976349	32976350	chr17:32976350:C:T	rs28909	C	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr17	33116028	33116029	chr17:33116029:T:C	rs4795746	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.879478364183603	2.907798711162862	TCCAATTAGG
chr17	33164434	33164435	chr17:33164435:C:G	rs2346683	C	G	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr17	33164438	33164439	chr17:33164439:T:G	chr17:33164439:T:G	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	7.802937221462287	4.5244913382021865	TCCAATTACC
chr17	33277670	33277671	chr17:33277671:A:G	rs1391084	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	7.319050938309992	1.392146951149928	GCTAATTACC
chr17	33411465	33411466	chr17:33411466:A:T	rs4794948	A	T	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	33499371	33499372	chr17:33499372:T:C	rs8081842	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.346039445977318	2.4191354588172542	CCTAATTACA
chr17	33751751	33751752	chr17:33751752:G:A	rs116238854	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	34176715	34176716	chr17:34176716:C:T	chr17:34176716:C:T	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	34361289	34361290	chr17:34361290:T:A	rs2282691	T	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	34382946	34382947	chr17:34382947:C:T	rs16969605	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr17	34420820	34420821	chr17:34420821:T:C	rs62062301	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.556294283327654	7.986674957005393	TCTAATTAAT
chr17	34533885	34533886	chr17:34533886:C:G	rs961575	C	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	34686493	34686494	chr17:34686494:A:T	rs4795969	A	T	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	34736655	34736656	chr17:34736656:A:G	rs12941768	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	34874846	34874847	chr17:34874847:A:C	rs234811	A	C	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	35063149	35063150	chr17:35063150:G:C	rs12453568	G	C	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	35191162	35191163	chr17:35191163:C:A	chr17:35191163:C:A	C	A	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	35341361	35341362	chr17:35341362:A:C	rs117127726	A	C	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	35976246	35976247	chr17:35976247:C:T	rs76570261	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.669239287099268	7.32432499189877	CTTAATTACC
chr17	35976275	35976276	chr17:35976276:T:C	rs80329614	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr17	36032935	36032936	chr17:36032936:T:C	rs854674	T	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr17	36910436	36910437	chr17:36910437:C:T	rs11651044	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	37438517	37438518	chr17:37438518:A:G	rs78954689	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr17	37860524	37860525	chr17:37860525:G:C	rs2456873	G	C	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr17	38789355	38789356	chr17:38789356:G:A	rs72625934	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr17	38922996	38922997	chr17:38922997:A:G	rs11867520	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr17	38923001	38923002	chr17:38923002:T:G	rs575809	T	G	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr17	39601918	39601919	chr17:39601919:G:A	rs66481362	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	39801378	39801379	chr17:39801379:C:T	rs34988504	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	39819839	39819840	chr17:39819840:T:A	rs114211283	T	A	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	39970223	39970224	chr17:39970224:A:G	rs4580194	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.233317895140026	2.2616382421192847	CCCAATTACC
chr17	40219878	40219879	chr17:40219879:C:T	chr17:40219879:C:T	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	40388371	40388372	chr17:40388372:G:A	rs2715555	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.298017703190137	8.867637029512398	CCTAATTAAG
chr17	40471677	40471678	chr17:40471678:G:A	rs181362792	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	40613124	40613125	chr17:40613125:G:C	rs190702856	G	C	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr17	40994336	40994337	chr17:40994337:G:A	rs2010385	G	A	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr17	41457881	41457882	chr17:41457882:A:G	rs2320706	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	41539221	41539222	chr17:41539222:T:G	rs114553459	T	G	G	Alx1.mouse_homeodomain_1	5	1	+	7.233317895140026	0.9443386604370666	CCCAATTACC
chr17	41539222	41539223	chr17:41539223:T:C	rs115101531	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	7.233317895140026	4.336223385803651	CCCAATTACC
chr17	42183615	42183616	chr17:42183616:C:T	rs58755779	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	8.74067261241241	8.874801250211958	TTTAATTAGC
chr17	42355046	42355047	chr17:42355047:G:C	rs4103200	G	C	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	42548827	42548828	chr17:42548828:C:G	rs145141705	C	G	c	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	42555011	42555012	chr17:42555012:C:T	rs2229233	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr17	43144544	43144545	chr17:43144545:G:A	rs115127596	G	A	g	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	43211540	43211541	chr17:43211541:T:G	rs969020766	T	G	T	Alx1.mouse_homeodomain_1	9	1	-	7.49200941844807	7.233317895140026	CCCAATTACA
chr17	43361986	43361987	chr17:43361987:T:G	rs181887514	T	G	t	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr17	43541308	43541309	chr17:43541309:C:G	rs12603189	C	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr17	43707034	43707035	chr17:43707035:C:T	rs118114662	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr17	43736714	43736715	chr17:43736715:G:A	rs9303538	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr17	44103067	44103068	chr17:44103068:G:A	rs609292	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	44166402	44166403	chr17:44166403:C:T	rs2040810	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	44386968	44386969	chr17:44386969:T:A	rs850728	T	A	t	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	44795806	44795807	chr17:44795807:A:G	rs112804392	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.145334108191209	3.1736544551704666	TTCAATTAGA
chr17	44968492	44968493	chr17:44968493:G:A	rs907502158	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	45007086	45007087	chr17:45007087:G:A	rs75353403	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr17	45141309	45141310	chr17:45141310:G:A	rs60289499	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	45189151	45189152	chr17:45189152:T:A	rs7219397	T	A	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr17	45189174	45189175	chr17:45189175:T:C	rs78509373	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.233317895140026	2.2616382421192847	CCCAATTACC
chr17	45259319	45259320	chr17:45259320:G:C	rs4247364	G	C	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr17	45590469	45590470	chr17:45590470:C:A	rs62064418	C	A	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	45666977	45666978	chr17:45666978:T:A	rs1635298	T	A	T	Alx1.mouse_homeodomain_1	6	1	+	7.309859037861343	4.078082090532081	CCCAATTAGG
chr17	45730954	45730955	chr17:45730955:G:A	rs62054389	G	A	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr17	45825138	45825139	chr17:45825139:C:T	rs4341787	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.298017703190137	8.867637029512398	CCTAATTAAG
chr17	45825155	45825156	chr17:45825156:G:A	rs4523962	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr17	46195312	46195313	chr17:46195313:G:C	rs2732660	G	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr17	46256045	46256046	chr17:46256046:G:A	rs111920741	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	7.662075066399709	7.317160771199211	CCTAATTACG
chr17	46280502	46280503	chr17:46280503:T:C	rs111604810	T	C	.	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	46772559	46772560	chr17:46772560:A:G	rs199522	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.44398767566089	2.472308022640148	CCCAATTAAG
chr17	46923630	46923631	chr17:46923631:G:A	rs7225428	G	A	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	46929840	46929841	chr17:46929841:C:G	rs75921757	C	G	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	46929846	46929847	chr17:46929847:A:G	rs2072317	A	G	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	46984682	46984683	chr17:46984683:T:A	rs35246578	T	A	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	47126510	47126511	chr17:47126511:T:A	rs1476498	T	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr17	47277379	47277380	chr17:47277380:C:T	rs56327427	C	T	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	47468011	47468012	chr17:47468012:T:G	rs2085755	T	G	t	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr17	47738158	47738159	chr17:47738159:A:T	rs8078974	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	6.4154977513127465	TTTAATTAAA
chr17	47752542	47752543	chr17:47752543:G:T	rs72831657	G	T	-	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	47822097	47822098	chr17:47822098:A:C	rs1049828628	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	8.723290559459702	8.087347922669274	CCTAATTAAC
chr17	47869273	47869274	chr17:47869274:C:T	rs112518684	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	48003674	48003675	chr17:48003675:G:T	rs757351	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	48029858	48029859	chr17:48029859:T:C	rs115217454	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr17	48254131	48254132	chr17:48254132:C:T	rs9910351	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	48363644	48363645	chr17:48363645:T:C	rs118082030	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr17	48817234	48817235	chr17:48817235:A:T	rs114722761	A	T	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr17	48869634	48869635	chr17:48869635:C:T	rs12449856	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	48974066	48974067	chr17:48974067:G:A	rs28506885	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr17	49191943	49191944	chr17:49191944:C:G	rs72835437	C	G	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr17	49371741	49371742	chr17:49371742:C:T	rs12449986	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr17	49371777	49371778	chr17:49371778:T:A	rs28404278	T	A	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	49470293	49470294	chr17:49470294:T:C	rs753683150	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	49586577	49586578	chr17:49586578:C:T	rs55988045	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.305181923889696	8.874801250211958	CTTAATTAAC
chr17	50216405	50216406	chr17:50216406:C:T	rs2586503	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr17	50330853	50330854	chr17:50330854:C:T	rs72832425	C	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr17	50361427	50361428	chr17:50361428:G:A	rs144749304	G	A	g	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	50566199	50566200	chr17:50566200:C:T	rs116729193	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr17	50774995	50774996	chr17:50774996:C:T	rs35584288	C	T	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr17	50868391	50868392	chr17:50868392:C:T	rs34700818	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr17	50890013	50890014	chr17:50890014:A:G	rs8073538	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	7.49200941844807	1.565105431288007	CCCAATTACA
chr17	52517313	52517314	chr17:52517314:A:C	rs349999	A	C	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	53261852	53261853	chr17:53261853:G:T	rs983203605	G	T	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	53261885	53261886	chr17:53261886:C:T	rs9303614	C	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr17	53630969	53630970	chr17:53630970:A:C	rs2957396	A	C	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr17	53699956	53699957	chr17:53699957:A:G	rs17646526	A	G	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr17	53802979	53802980	chr17:53802980:T:C	rs9916689	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	8.298017703190137	3.326338050169395	CCTAATTAAG
chr17	54172925	54172926	chr17:54172926:A:G	rs77744045	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	54886695	54886696	chr17:54886696:T:A	rs10515083	T	A	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr17	54945278	54945279	chr17:54945279:G:A	rs34047392	G	A	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	54985541	54985542	chr17:54985542:C:A	rs10468513	C	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr17	55210965	55210966	chr17:55210966:C:T	rs7211981	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr17	55436575	55436576	chr17:55436576:T:C	rs7211802	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	55466934	55466935	chr17:55466935:C:G	rs371024515	C	G	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	55584320	55584321	chr17:55584321:C:T	rs74609392	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	55603676	55603677	chr17:55603677:G:T	rs1506590	G	T	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	56811716	56811717	chr17:56811717:T:C	rs3896369	T	C	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	57186090	57186091	chr17:57186091:T:G	rs79880790	T	G	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	57258793	57258794	chr17:57258794:G:A	rs8071182	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	57294796	57294797	chr17:57294797:G:A	rs11657906	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.319050938309992	6.9009423027399865	GCTAATTACC
chr17	57375989	57375990	chr17:57375990:G:A	rs1982272	G	A	A	Alx1.mouse_homeodomain_1	0	1	-	8.981982082767747	9.551601409090008	CCTAATTAAA
chr17	57435664	57435665	chr17:57435665:G:A	rs76529191	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	57550132	57550133	chr17:57550133:G:A	rs75825980	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	57603537	57603538	chr17:57603538:C:A	rs114877474	C	A	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr17	57794886	57794887	chr17:57794887:C:G	rs28843453	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.69757138156076	7.3853940880652	TCCAATTAAA
chr17	57885103	57885104	chr17:57885104:T:C	rs2586051	T	C	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	57946773	57946774	chr17:57946774:G:T	rs76221068	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	58530597	58530598	chr17:58530598:G:A	rs3744111	G	A	g	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	59083151	59083152	chr17:59083152:G:C	rs8081058	G	C	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	59367549	59367550	chr17:59367550:C:A	rs67941865	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	7.309859037861343	5.716547111693559	CCCAATTAGG
chr17	59372376	59372377	chr17:59372377:G:A	rs115878524	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	7.317023258560902	7.886642584883163	CTCAATTAGC
chr17	59399873	59399874	chr17:59399874:T:G	rs1451508	T	G	G	Alx1.mouse_homeodomain_1	7	1	-	7.802937221462287	4.5244913382021865	TCCAATTACC
chr17	59423710	59423711	chr17:59423711:A:G	rs16943529	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.309859037861343	2.338179384840601	CCCAATTAGG
chr17	59490219	59490220	chr17:59490220:T:G	chr17:59490220:T:G	T	G	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	59753111	59753112	chr17:59753112:C:A	rs2777885	C	A	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	59764693	59764694	chr17:59764694:C:T	rs28650831	C	T	c	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr17	60134729	60134730	chr17:60134730:T:C	rs345171	T	C	-	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr17	60390716	60390717	chr17:60390717:G:A	rs73322612	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	60415329	60415330	chr17:60415330:G:A	rs8068802	G	A	g	Alx1.mouse_homeodomain_1	0	1	-	7.869260531930455	8.438879858252715	CCCAATTAAC
chr17	60525448	60525449	chr17:60525449:G:A	rs766842594	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	60554340	60554341	chr17:60554341:T:C	rs931564	T	C	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	60908675	60908676	chr17:60908676:T:C	rs6504005	T	C	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	61313787	61313788	chr17:61313788:T:C	rs3785857	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	61383778	61383779	chr17:61383779:C:T	rs115196306	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	61383779	61383780	chr17:61383780:G:A	rs536490248	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	61411394	61411395	chr17:61411395:A:C	rs962978021	A	C	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr17	61414022	61414023	chr17:61414023:A:G	rs9892365	A	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr17	61495645	61495646	chr17:61495646:T:C	rs77544277	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr17	62565780	62565781	chr17:62565781:G:T	rs11079481	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr17	62628885	62628886	chr17:62628886:T:C	rs547713459	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr17	62738688	62738689	chr17:62738689:A:G	rs766038	A	G	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	63460907	63460908	chr17:63460908:T:A	rs190843463	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	8.563873447197741	5.845878424990485	CTTAATTAAA
chr17	64174637	64174638	chr17:64174638:T:C	rs903286	T	C	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	64329333	64329334	chr17:64329334:A:T	rs2070784	A	T	T	Alx1.mouse_homeodomain_1	0	1	-	8.656967248991535	7.439169388758474	TCTAATTACC
chr17	64615255	64615256	chr17:64615256:C:T	rs73333961	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr17	65679340	65679341	chr17:65679341:T:A	rs232102	T	A	A	Alx1.mouse_homeodomain_1	4	1	-	8.497550136729574	3.422781589991669	TTTAATTACA
chr17	65930545	65930546	chr17:65930546:T:A	rs73346899	T	A	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	65982618	65982619	chr17:65982619:G:A	rs1443304	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr17	66193376	66193377	chr17:66193377:C:T	rs72837176	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr17	66559814	66559815	chr17:66559815:C:T	rs7225359	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr17	66584819	66584820	chr17:66584820:T:C	rs2361490	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	66827243	66827244	chr17:66827244:A:G	rs78565422	A	G	a	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	66979226	66979227	chr17:66979227:C:G	rs12451641	C	G	c	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	67410713	67410714	chr17:67410714:G:T	rs111821862	G	T	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr17	67410740	67410741	chr17:67410741:A:G	rs73338112	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	67485992	67485993	chr17:67485993:G:A	rs2916148	G	A	a	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	67517046	67517047	chr17:67517047:C:T	rs4791285	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr17	67525605	67525606	chr17:67525606:A:C	rs12600425	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	67682890	67682891	chr17:67682891:G:A	rs11655597	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	67707699	67707700	chr17:67707700:A:G	rs12945760	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	68036334	68036335	chr17:68036335:C:G	rs138943406	C	G	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	68054607	68054608	chr17:68054608:C:T	rs139584626	C	T	c	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr17	68069488	68069489	chr17:68069489:G:A	rs138292344	G	A	-	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr17	68235143	68235144	chr17:68235144:G:A	rs117775859	G	A	A	Alx1.mouse_homeodomain_1	8	1	-	8.23169439272197	7.886780097521472	TCTAATTACG
chr17	68444146	68444147	chr17:68444147:G:C	rs117368413	G	C	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	68595529	68595530	chr17:68595530:T:C	rs142273963	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr17	69029422	69029423	chr17:69029423:G:T	rs16973526	G	T	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	69246904	69246905	chr17:69246905:A:G	rs192547685	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	69326447	69326448	chr17:69326448:C:T	rs76905625	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	69486211	69486212	chr17:69486212:G:A	rs8077944	G	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	70040786	70040787	chr17:70040787:T:G	rs180169	T	G	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	71155056	71155057	chr17:71155057:T:G	rs2058086	T	G	t	Alx1.mouse_homeodomain_1	3	1	-	7.802937221462287	3.672524527531825	TCCAATTACC
chr17	71260849	71260850	chr17:71260850:A:T	rs142761666	A	T	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr17	71665844	71665845	chr17:71665845:C:T	chr17:71665845:C:T	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	71710102	71710103	chr17:71710103:C:T	rs16976853	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	71896059	71896060	chr17:71896060:C:A	rs8079201	C	A	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr17	71966351	71966352	chr17:71966352:A:G	rs543332401	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.497550136729574	7.643520109200326	TTTAATTACA
chr17	72742971	72742972	chr17:72742972:T:C	rs2567471	T	C	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	73070696	73070697	chr17:73070697:G:T	rs111867318	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.23885861342153	8.497550136729574	TTTAATTACC
chr17	73095080	73095081	chr17:73095081:G:A	rs11656509	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr17	73108008	73108009	chr17:73108009:G:A	rs143738247	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	73262706	73262707	chr17:73262707:C:G	rs7217509	C	G	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr17	73360361	73360362	chr17:73360362:G:A	rs572442859	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr17	73411102	73411103	chr17:73411103:G:A	rs11650320	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr17	73640668	73640669	chr17:73640669:T:C	rs4789237	T	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	73664631	73664632	chr17:73664632:A:G	rs56115087	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	73748757	73748758	chr17:73748758:A:G	rs80113825	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	73748784	73748785	chr17:73748785:C:T	rs185321127	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr17	73748797	73748798	chr17:73748798:C:T	rs2683166	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	73979449	73979450	chr17:73979450:G:T	rs7225228	G	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	74031261	74031262	chr17:74031262:T:C	rs1531237	T	C	t	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr17	74271380	74271381	chr17:74271381:T:C	rs4789050	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr17	74272068	74272069	chr17:74272069:A:G	rs7219585	A	G	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr17	74386777	74386778	chr17:74386778:C:A	rs16978020	C	A	C	Alx1.mouse_homeodomain_1	8	1	+	7.669239287099268	8.305181923889696	CTTAATTACC
chr17	74431447	74431448	chr17:74431448:C:G	rs3803789	C	G	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr17	74838445	74838446	chr17:74838446:A:G	rs3803783	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	8.74067261241241	5.843578103076035	TTTAATTAGC
chr17	75274077	75274078	chr17:75274078:T:C	rs733301	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr17	75590442	75590443	chr17:75590443:C:G	rs4789218	C	G	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr17	75775657	75775658	chr17:75775658:G:A	rs59483926	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr17	75775696	75775697	chr17:75775697:G:T	chr17:75775697:G:T	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	75908337	75908338	chr17:75908338:C:T	rs8079113	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	75946068	75946069	chr17:75946069:A:G	rs3682	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	76049142	76049143	chr17:76049143:C:A	rs2598434	C	A	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	76383492	76383493	chr17:76383493:A:C	chr17:76383493:A:C	A	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	76659991	76659992	chr17:76659992:G:A	rs145411621	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr17	76842218	76842219	chr17:76842219:G:A	rs79125115	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr17	76918858	76918859	chr17:76918859:A:G	rs16969506	A	G	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr17	76944157	76944158	chr17:76944158:C:T	rs138614144	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr17	76969129	76969130	chr17:76969130:A:C	rs76620561	A	C	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	77321093	77321094	chr17:77321094:C:G	rs73371416	C	G	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr17	77321132	77321133	chr17:77321133:G:A	rs577143273	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	77460417	77460418	chr17:77460418:G:A	rs312842	G	A	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr17	77620603	77620604	chr17:77620604:C:T	rs9911541	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr17	77667418	77667419	chr17:77667419:A:G	rs60209456	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	77716843	77716844	chr17:77716844:C:A	rs10852786	C	A	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr17	77787195	77787196	chr17:77787196:T:C	rs12602889	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr17	78538543	78538544	chr17:78538544:G:A	rs61345070	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr17	78778675	78778676	chr17:78778676:A:C	rs78550738	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.981982082767747	4.16684968988381	CCTAATTAAA
chr17	78883033	78883034	chr17:78883034:C:T	rs72851216	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr17	79009227	79009228	chr17:79009228:A:G	rs184173104	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr17	79299691	79299692	chr17:79299692:T:C	rs8082640	T	C	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr17	79420395	79420396	chr17:79420396:C:T	rs551269414	C	T	c	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr17	79708846	79708847	chr17:79708847:G:C	chr17:79708847:G:C	G	C	g	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr17	79779110	79779111	chr17:79779111:T:C	rs115217657	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr17	79845589	79845590	chr17:79845590:T:A	rs80188791	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	7.317023258560902	4.5990282363536465	CTCAATTAGC
chr17	79845607	79845608	chr17:79845608:C:A	rs140033722	C	A	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	79852709	79852710	chr17:79852710:A:G	rs1663223	A	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr17	79950725	79950726	chr17:79950726:T:G	rs73423907	T	G	T	Alx1.mouse_homeodomain_1	9	1	-	8.346039445977318	8.087347922669274	CCTAATTACA
chr17	79978334	79978335	chr17:79978335:G:A	rs1468911446	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.589161921660155	8.17105328609015	CCTAATTAGC
chr17	80063928	80063929	chr17:80063929:T:C	rs34865586	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr17	80439628	80439629	chr17:80439629:A:G	rs4318264	A	G	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr17	80689608	80689609	chr17:80689609:G:A	rs186729974	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr17	80737922	80737923	chr17:80737923:A:T	rs12936454	A	T	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr17	80743603	80743604	chr17:80743604:A:C	rs3764371	A	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	80800504	80800505	chr17:80800505:G:A	rs72853708	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	80800579	80800580	chr17:80800580:C:G	rs9905648	C	G	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	81310333	81310334	chr17:81310334:G:T	rs56207672	G	T	G	Alx1.mouse_homeodomain_1	8	1	-	8.23885861342153	8.874801250211958	TTTAATTACC
chr17	81343924	81343925	chr17:81343925:G:A	rs111866441	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.312052953791037	7.575437351336728	TCTAATTATC
chr17	81343953	81343954	chr17:81343954:C:T	rs80147643	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	81579682	81579683	chr17:81579683:C:G	rs62073414	C	G	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	82159601	82159602	chr17:82159602:C:A	rs8078102	C	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	82267644	82267645	chr17:82267645:G:A	rs114320911	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr17	82451415	82451416	chr17:82451416:A:G	rs577997763	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	7.9549935751004215	7.8208649373008745	GCTAATTAAC
chr17	82574239	82574240	chr17:82574240:T:C	rs11653286	T	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr17	82574245	82574246	chr17:82574246:G:C	rs72862366	G	C	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr17	82747693	82747694	chr17:82747694:T:C	rs2251989	T	C	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr17	82780457	82780458	chr17:82780458:C:A	rs74000079	C	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	83057653	83057654	chr17:83057654:C:T	rs536287801	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	83106372	83106373	chr17:83106373:G:A	rs28626243	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	83185957	83185958	chr17:83185958:T:A	rs12939623	T	A	g	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	83185957	83185958	chr17:83185958:T:G	chr17:83185958:T:G	T	G	g	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	83185979	83185980	chr17:83185980:A:G	rs12940383	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	9.158781247982416	3.2318772608223525	TCTAATTAGC
chr18	425645	425646	chr18:425646:C:G	rs72863546	C	G	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr18	425648	425649	chr18:425649:G:A	rs62088038	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr18	457111	457112	chr18:457112:C:T	rs114920333	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	8.867637029512398	9.551601409090008	TCTAATTAAG
chr18	476874	476875	chr18:476875:G:A	rs28418336	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr18	1708332	1708333	chr18:1708333:A:G	rs4797053	A	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr18	1965689	1965690	chr18:1965690:C:T	rs73377716	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	1969622	1969623	chr18:1969623:A:G	rs77248273	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.233317895140026	2.2616382421192847	CCCAATTACC
chr18	2023811	2023812	chr18:2023812:A:G	rs1573325	A	G	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	2108765	2108766	chr18:2108766:A:C	rs501068	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	2166852	2166853	chr18:2166853:T:C	rs478692	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	2166868	2166869	chr18:2166869:T:C	rs478743	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	8.69757138156076	8.1279520552385	TCCAATTAAA
chr18	2575481	2575482	chr18:2575482:C:T	rs2644187	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr18	3011743	3011744	chr18:3011744:G:C	rs58940048	G	C	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	3011744	3011745	chr18:3011745:G:C	rs59096963	G	C	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	3088904	3088905	chr18:3088905:T:C	rs4413045	T	C	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr18	3175381	3175382	chr18:3175382:C:G	rs11877597	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.16388906539059	6.851711771895029	CCTAATTAGG
chr18	3251035	3251036	chr18:3251036:C:T	rs2053567	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	3265753	3265754	chr18:3265754:A:G	rs189768048	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr18	3463174	3463175	chr18:3463175:T:A	rs17723621	T	A	T	Alx1.mouse_homeodomain_1	0	1	+	9.551601409090008	8.333803548856949	TCTAATTAAA
chr18	4908559	4908560	chr18:4908560:C:T	rs79965868	C	T	T	Alx1.mouse_homeodomain_1	2	1	+	8.563442743761213	9.417472771290461	TCCAATTAGA
chr18	5238408	5238409	chr18:5238409:G:A	rs1295882365	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	8.17105328609015	8.305181923889696	CTTAATTAGC
chr18	5238412	5238413	chr18:5238413:C:A	rs9627	C	A	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr18	6666204	6666205	chr18:6666205:T:C	rs9951897	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	6730946	6730947	chr18:6730947:T:C	rs4078165	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	8088970	8088971	chr18:8088971:G:C	rs488952	G	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr18	8212654	8212655	chr18:8212655:T:A	rs6506558	T	A	A	Alx1.mouse_homeodomain_1	2	1	+	8.74067261241241	6.647828709103172	TTTAATTAGC
chr18	8478170	8478171	chr18:8478171:C:T	rs4798647	C	T	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr18	8692921	8692922	chr18:8692922:T:C	rs670454	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	8801352	8801353	chr18:8801353:A:G	rs513953	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	9097858	9097859	chr18:9097859:G:A	rs72942538	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	9414012	9414013	chr18:9414013:G:A	rs2169601	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr18	9869922	9869923	chr18:9869923:G:A	rs114882416	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	9869957	9869958	chr18:9869958:T:G	rs75949414	T	G	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr18	10232104	10232105	chr18:10232105:A:G	rs11662344	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.91565877229958	3.927936856030598	TCTAATTACA
chr18	11969057	11969058	chr18:11969058:C:T	rs117004964	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr18	11969093	11969094	chr18:11969094:G:A	rs111283819	G	A	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	12273893	12273894	chr18:12273894:C:T	rs12966216	C	T	c	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr18	12404191	12404192	chr18:12404192:T:A	rs4797681	T	A	T	Alx1.mouse_homeodomain_1	2	1	+	8.74067261241241	6.647828709103172	TTTAATTAGC
chr18	12638922	12638923	chr18:12638923:G:A	rs112375986	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	13515999	13516000	chr18:13516000:A:C	rs28553387	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	21135029	21135030	chr18:21135030:A:G	rs11873284	A	G	G	Alx1.mouse_homeodomain_1	0	1	-	8.01360700198315	7.44398767566089	TCCAATTAAG
chr18	22342945	22342946	chr18:22342946:A:G	rs149451735	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	9.133492773520002	6.526672883671313	TTTAATTAAA
chr18	22674072	22674073	chr18:22674073:T:A	rs878469	T	A	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	22728523	22728524	chr18:22728524:A:G	rs9304197	A	G	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr18	23232765	23232766	chr18:23232766:G:A	rs768271557	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr18	23486858	23486859	chr18:23486859:C:T	rs76869171	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	23886350	23886351	chr18:23886351:T:G	rs9955681	T	G	T	Alx1.mouse_homeodomain_1	4	1	-	8.589161921660155	3.1273952709390005	CCTAATTAGC
chr18	23969712	23969713	chr18:23969713:T:G	rs9956312	T	G	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	24011331	24011332	chr18:24011332:G:T	chr18:24011332:G:T	G	T	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr18	24554188	24554189	chr18:24554189:G:A	rs12604956	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr18	24662251	24662252	chr18:24662252:T:C	rs967763	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr18	25549660	25549661	chr18:25549661:A:G	rs166655	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	25549672	25549673	chr18:25549673:A:G	rs17798998	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.309859037861343	2.338179384840601	CCCAATTAGG
chr18	25779172	25779173	chr18:25779173:A:G	rs17188689	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	25900960	25900961	chr18:25900961:T:G	rs1785750	T	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	26263129	26263130	chr18:26263130:T:G	rs72880118	T	G	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	26513464	26513465	chr18:26513465:G:C	rs12454640	G	C	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	26752511	26752512	chr18:26752512:A:G	rs1667550	A	G	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr18	27565806	27565807	chr18:27565807:G:A	rs636545	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr18	27948565	27948566	chr18:27948566:T:C	rs1348388	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr18	28875371	28875372	chr18:28875372:C:T	rs7231267	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	28909220	28909221	chr18:28909221:G:A	rs145301617	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr18	28993249	28993250	chr18:28993250:A:G	rs9304530	A	G	A	Alx1.mouse_homeodomain_1	1	1	-	8.874801250211958	9.292909885781963	TTTAATTAAC
chr18	29465671	29465672	chr18:29465672:C:T	rs117789525	C	T	c	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr18	29741730	29741731	chr18:29741731:G:A	rs9958617	G	A	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	29928399	29928400	chr18:29928400:A:G	rs74485858	A	G	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr18	29928560	29928561	chr18:29928561:T:G	rs4799340	T	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr18	31207391	31207392	chr18:31207392:T:A	rs1365295	T	A	A	Alx1.mouse_homeodomain_1	2	1	+	8.087347922669274	5.9945040193600345	CCTAATTACC
chr18	32549009	32549010	chr18:32549010:A:G	rs144778958	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	32613164	32613165	chr18:32613165:A:G	rs141077951	A	G	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr18	34457570	34457571	chr18:34457571:A:C	rs7236918	A	C	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr18	34576565	34576566	chr18:34576566:C:T	rs2579801	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	34624668	34624669	chr18:34624669:C:T	rs9973194	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr18	35303657	35303658	chr18:35303658:G:A	rs4399606	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	35378440	35378441	chr18:35378441:G:A	rs888459	G	A	A	Alx1.mouse_homeodomain_1	8	1	+	7.993823417438953	8.1279520552385	CCCAATTAGA
chr18	35698159	35698160	chr18:35698160:G:A	rs72968433	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	36255358	36255359	chr18:36255359:A:G	rs12606711	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr18	37384041	37384042	chr18:37384042:C:T	rs7242303	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr18	37953961	37953962	chr18:37953962:G:A	rs570932371	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr18	38402663	38402664	chr18:38402664:G:A	rs1196577	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	38896033	38896034	chr18:38896034:C:T	rs12454739	C	T	.	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	39231401	39231402	chr18:39231402:T:G	rs8092439	T	G	T	Alx1.mouse_homeodomain_1	8	1	-	8.305181923889696	7.669239287099268	CTTAATTAAC
chr18	39330094	39330095	chr18:39330095:T:G	rs12954467	T	G	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr18	39433806	39433807	chr18:39433807:A:G	rs1619247	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr18	39788533	39788534	chr18:39788534:G:A	chr18:39788534:G:A	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.233317895140026	6.81520925957002	CCCAATTACC
chr18	39846584	39846585	chr18:39846585:G:A	rs1513678	G	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr18	39990724	39990725	chr18:39990725:A:C	rs79009099	A	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	40356327	40356328	chr18:40356328:A:C	rs75558681	A	C	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr18	40403060	40403061	chr18:40403061:C:T	rs7407346	C	T	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	40652692	40652693	chr18:40652693:G:A	rs2437945	G	A	g	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr18	40712927	40712928	chr18:40712928:A:T	rs16973699	A	T	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	40933047	40933048	chr18:40933048:A:G	rs4890471	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr18	41704396	41704397	chr18:41704397:G:T	rs78754317	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr18	41755039	41755040	chr18:41755040:C:T	rs2082586	C	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr18	42345930	42345931	chr18:42345931:A:G	rs415805	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr18	42752526	42752527	chr18:42752527:A:C	rs1835500	A	C	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr18	42848250	42848251	chr18:42848251:C:T	rs16977056	C	T	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	42949121	42949122	chr18:42949122:A:T	rs1944405	A	T	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr18	43009755	43009756	chr18:43009756:T:A	rs4414570	T	A	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr18	43635528	43635529	chr18:43635529:C:A	chr18:43635529:C:A	C	A	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr18	43657312	43657313	chr18:43657313:C:T	rs7231543	C	T	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr18	44051229	44051230	chr18:44051230:A:C	chr18:44051230:A:C	A	C	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	44051242	44051243	chr18:44051243:G:T	rs74365037	G	T	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	44723160	44723161	chr18:44723161:C:G	rs186566478	C	G	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	45244028	45244029	chr18:45244029:G:C	rs7235910	G	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr18	45469527	45469528	chr18:45469528:G:A	rs2852286	G	A	A	Alx1.mouse_homeodomain_1	9	1	+	7.662075066399709	8.346039445977318	CCTAATTACG
chr18	45656765	45656766	chr18:45656766:C:T	rs2035532	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	7.9549935751004215	7.218377972646112	GCTAATTAAC
chr18	45755933	45755934	chr18:45755934:C:T	rs9966818	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr18	45781640	45781641	chr18:45781641:T:G	rs8093452	T	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr18	46313291	46313292	chr18:46313292:G:T	rs7237514	G	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	46408668	46408669	chr18:46408669:A:G	rs9951417	A	G	a	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	46416045	46416046	chr18:46416046:A:G	rs35897092	A	G	a	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	47249817	47249818	chr18:47249818:A:G	rs61401225	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr18	47332262	47332263	chr18:47332263:C:T	rs7240132	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	47551973	47551974	chr18:47551974:T:C	rs2063327	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	7.802937221462287	2.8152153051933064	TCCAATTACC
chr18	47633152	47633153	chr18:47633153:T:C	rs72924356	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr18	48010768	48010769	chr18:48010769:A:C	rs72916093	A	C	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	48304983	48304984	chr18:48304984:C:G	rs4940351	C	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	48575478	48575479	chr18:48575479:T:C	rs998722	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	48828534	48828535	chr18:48828535:A:T	rs931477247	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	8.16388906539059	5.445894043183334	CCTAATTAGG
chr18	48918276	48918277	chr18:48918277:C:T	rs73435427	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr18	49603971	49603972	chr18:49603972:G:A	rs17712928	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	49817388	49817389	chr18:49817389:A:G	rs8182420	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr18	50190706	50190707	chr18:50190707:A:C	rs74921961	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	50240342	50240343	chr18:50240343:T:C	rs60460293	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr18	50372822	50372823	chr18:50372823:A:G	rs73959943	A	G	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr18	52344969	52344970	chr18:52344970:G:C	rs1025910	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr18	52485575	52485576	chr18:52485576:C:T	rs73955700	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	52723511	52723512	chr18:52723512:C:A	rs4641847	C	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr18	52833837	52833838	chr18:52833838:T:A	rs1821120	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	53327166	53327167	chr18:53327167:G:T	rs34921006	G	T	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr18	54608001	54608002	chr18:54608002:A:G	rs8092019	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.879478364183603	2.907798711162862	TCCAATTAGG
chr18	54906857	54906858	chr18:54906858:A:C	rs76423456	A	C	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	54906884	54906885	chr18:54906885:A:G	rs7232786	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr18	55119380	55119381	chr18:55119381:G:A	rs4239470	G	A	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr18	56038325	56038326	chr18:56038326:T:C	rs2551458	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr18	56068403	56068404	chr18:56068404:G:T	rs2535728	G	T	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr18	56919258	56919259	chr18:56919259:T:A	rs7244830	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	8.91565877229958	6.197663750092323	TCTAATTACA
chr18	56988204	56988205	chr18:56988205:G:T	rs138480482	G	T	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr18	57959567	57959568	chr18:57959568:A:G	rs9953076	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr18	57992650	57992651	chr18:57992651:T:C	rs72947371	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.305181923889696	7.451151896360449	CTTAATTAAC
chr18	58438926	58438927	chr18:58438927:C:T	rs4940694	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	58494143	58494144	chr18:58494144:T:A	rs150246154	T	A	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	58494163	58494164	chr18:58494164:T:C	rs4539687	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	8.563442743761213	5.666348234424839	TCCAATTAGA
chr18	58503538	58503539	chr18:58503539:T:A	rs8090520	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	58512273	58512274	chr18:58512274:G:A	rs537122221	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr18	58542154	58542155	chr18:58542155:C:T	rs79840975	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr18	59478697	59478698	chr18:59478698:C:T	rs55962241	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	59478698	59478699	chr18:59478699:A:G	rs56359247	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	60509890	60509891	chr18:60509891:G:T	rs585187	G	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	60888276	60888277	chr18:60888277:G:C	rs56314018	G	C	C	Alx1.mouse_homeodomain_1	8	1	+	8.304751220453168	7.802937221462287	TCCAATTAGC
chr18	61891018	61891019	chr18:61891019:G:C	rs112639447	G	C	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	63083394	63083395	chr18:63083395:A:G	rs8083913	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	63255464	63255465	chr18:63255465:C:T	rs116681425	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	63874118	63874119	chr18:63874119:A:C	chr18:63874119:A:C	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	64440057	64440058	chr18:64440058:C:T	rs2959481	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	64585526	64585527	chr18:64585527:T:C	rs58788870	T	C	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr18	64592407	64592408	chr18:64592408:C:T	rs4353556	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr18	64620171	64620172	chr18:64620172:A:C	rs4941290	A	C	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr18	65070481	65070482	chr18:65070482:A:G	rs17260685	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr18	65522218	65522219	chr18:65522219:C:T	rs8086560	C	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr18	65522235	65522236	chr18:65522236:G:C	rs2166029	G	C	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr18	65938713	65938714	chr18:65938714:T:A	rs2541854	T	A	a	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	66571335	66571336	chr18:66571336:A:G	rs1943321	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr18	66586030	66586031	chr18:66586031:C:T	rs6566216	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr18	67074531	67074532	chr18:67074532:G:A	rs4891589	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	67074791	67074792	chr18:67074792:T:G	rs112650874	T	G	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr18	67081015	67081016	chr18:67081016:A:G	rs11876636	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.874801250211958	3.903121597191216	TTTAATTAAC
chr18	68298284	68298285	chr18:68298285:C:A	rs144952908	C	A	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	68417656	68417657	chr18:68417657:T:C	rs7237404	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	69370896	69370897	chr18:69370897:G:A	rs8096030	G	A	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	69376516	69376517	chr18:69376517:G:C	rs1218458121	G	C	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	69866157	69866158	chr18:69866158:C:T	rs58180206	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	69866163	69866164	chr18:69866164:C:T	rs1790932	C	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	69874202	69874203	chr18:69874203:G:A	rs72955835	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr18	70004902	70004903	chr18:70004903:T:C	rs12968403	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr18	70209041	70209042	chr18:70209042:T:C	rs116908718	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr18	70650220	70650221	chr18:70650221:T:A	rs536895744	T	A	T	Alx1.mouse_homeodomain_1	9	1	-	8.8478534449682	7.852546319205846	CCTAATTAGA
chr18	70966754	70966755	chr18:70966755:T:A	rs1003810831	T	A	T	Alx1.mouse_homeodomain_1	0	1	+	8.91565877229958	7.697860912066519	TCTAATTACA
chr18	71265585	71265586	chr18:71265586:A:C	rs10469187	A	C	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	71301905	71301906	chr18:71301906:C:T	rs12604484	C	T	c	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	71462001	71462002	chr18:71462002:G:A	rs1037533	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	71628713	71628714	chr18:71628714:A:C	rs8099176	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	8.01360700198315	6.675690691301608	TCCAATTAAG
chr18	71682458	71682459	chr18:71682459:T:C	rs9954913	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	72207359	72207360	chr18:72207360:G:C	rs12607299	G	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	72556092	72556093	chr18:72556093:C:G	rs7227689	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr18	73539491	73539492	chr18:73539492:A:C	rs17087802	A	C	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr18	74284477	74284478	chr18:74284478:C:T	rs77467869	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr18	74378002	74378003	chr18:74378003:T:C	rs17807329	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr18	74390857	74390858	chr18:74390858:A:G	rs17807838	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	74697125	74697126	chr18:74697126:T:C	rs12454086	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr18	74790710	74790711	chr18:74790711:A:G	rs17832309	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr18	75201964	75201965	chr18:75201965:C:T	rs61910717	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr18	75324277	75324278	chr18:75324278:A:C	rs117255566	A	C	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr18	75482939	75482940	chr18:75482940:A:G	rs1378775328	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr18	75679043	75679044	chr18:75679044:A:G	rs78170237	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr18	75831413	75831414	chr18:75831414:C:G	rs11150918	C	G	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	76447265	76447266	chr18:76447266:A:G	rs690265	A	G	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr18	76582603	76582604	chr18:76582604:C:T	rs9966597	C	T	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	76582612	76582613	chr18:76582613:C:G	rs17563049	C	G	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	77065439	77065440	chr18:77065440:A:G	rs12326491	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr18	77071808	77071809	chr18:77071809:T:C	chr18:77071809:T:C	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	77297980	77297981	chr18:77297981:A:G	rs2717139	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr18	78087260	78087261	chr18:78087261:A:C	rs4381678	A	C	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr18	78571794	78571795	chr18:78571795:T:C	rs75825114	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	79071558	79071559	chr18:79071559:T:A	rs7240611	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	79201087	79201088	chr18:79201088:T:C	rs12455772	T	C	c	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr18	79201873	79201874	chr18:79201874:A:T	rs866512229	A	T	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	79201880	79201881	chr18:79201881:T:A	rs7233555	T	A	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	79201881	79201882	chr18:79201882:T:A	rs183106980	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	79352480	79352481	chr18:79352481:C:T	rs1105427	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr18	79388698	79388699	chr18:79388699:A:G	rs304923	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.69757138156076	3.70984946529178	TCCAATTAAA
chr18	79611302	79611303	chr18:79611303:T:A	rs566564	T	A	A	Alx1.mouse_homeodomain_1	6	1	+	7.8208649373008745	4.589087989971611	GCTAATTAGC
chr18	79664953	79664954	chr18:79664954:C:T	rs554706595	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	79739187	79739188	chr18:79739188:C:G	rs3859320	C	G	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	79868718	79868719	chr18:79868719:T:C	rs35201860	T	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	79913430	79913431	chr18:79913431:G:A	rs145116028	G	A	g	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr19	506407	506408	chr19:506408:T:C	rs114914943	T	C	t	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr19	511452	511453	chr19:511453:A:G	rs3745924	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr19	792890	792891	chr19:792891:T:C	rs73490574	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	939696	939697	chr19:939697:A:G	rs10414193	A	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	1028434	1028435	chr19:1028435:C:G	rs79064007	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr19	1214334	1214335	chr19:1214335:C:T	rs76100516	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	1361579	1361580	chr19:1361580:A:G	rs1259794682	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr19	1641898	1641899	chr19:1641899:A:C	rs8108123	A	C	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr19	2238667	2238668	chr19:2238668:G:T	rs7253181	G	T	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr19	2326215	2326216	chr19:2326216:C:T	rs2270048	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	2522337	2522338	chr19:2522338:C:T	rs35834058	C	T	c	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	2533557	2533558	chr19:2533558:A:G	rs6510681	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr19	2553254	2553255	chr19:2553255:G:A	rs116873637	G	A	a	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	2856828	2856829	chr19:2856829:T:C	rs112850069	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.438879858252715	8.304751220453168	TCCAATTAAC
chr19	2906198	2906199	chr19:2906199:C:G	rs73525630	C	G	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	2906228	2906229	chr19:2906229:A:T	rs7507713	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	2962466	2962467	chr19:2962467:T:C	rs8100795	T	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr19	3046068	3046069	chr19:3046069:T:C	rs72973282	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	7.852546319205846	6.998516291676599	CCTAATTAGT
chr19	3164899	3164900	chr19:3164900:G:C	rs1682805	G	C	G	Alx1.mouse_homeodomain_1	2	1	-	7.735131894130908	5.58966436716515	CCCAATTAGC
chr19	4007678	4007679	chr19:4007679:C:T	rs933320674	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	4007684	4007685	chr19:4007685:C:T	rs889185945	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	4296608	4296609	chr19:4296609:C:A	rs138655456	C	A	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr19	4341901	4341902	chr19:4341902:C:T	rs2386601	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr19	4470613	4470614	chr19:4470614:C:T	rs10407114	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.346039445977318	7.927930810407313	CCTAATTACA
chr19	4728951	4728952	chr19:4728952:T:A	rs764271	T	A	a	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr19	5288863	5288864	chr19:5288864:C:T	rs17676218	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr19	5353306	5353307	chr19:5353307:T:A	rs10405017	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	5386955	5386956	chr19:5386956:G:A	rs67568348	G	A	g	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	5386971	5386972	chr19:5386972:G:A	rs66482878	G	A	a	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr19	5689245	5689246	chr19:5689246:C:T	rs67905503	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	5906383	5906384	chr19:5906384:T:A	rs543519	T	A	T	Alx1.mouse_homeodomain_1	4	1	-	8.304751220453168	3.2299826737152646	TCCAATTAGC
chr19	6623038	6623039	chr19:6623039:G:T	rs389971	G	T	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr19	7098384	7098385	chr19:7098385:T:G	rs541529844	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	8.556294283327654	2.2673150486246945	TCTAATTAAT
chr19	7102590	7102591	chr19:7102591:A:G	rs866461836	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	7196612	7196613	chr19:7196613:T:G	rs62111422	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	7.879909067620131	3.0647766747361938	CTTAATTAAG
chr19	7248928	7248929	chr19:7248929:A:T	rs77163996	A	T	T	Alx1.mouse_homeodomain_1	2	1	-	8.17105328609015	6.078209382780911	CTTAATTAGC
chr19	7248933	7248934	chr19:7248934:T:C	rs10412476	T	C	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	7434555	7434556	chr19:7434556:A:G	rs78290157	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	9.158781247982416	8.304751220453168	TCTAATTAGC
chr19	7769833	7769834	chr19:7769834:T:C	rs684388	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	7772856	7772857	chr19:7772857:T:G	rs621025	T	G	g	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr19	7799761	7799762	chr19:7799762:C:G	rs56307084	C	G	c	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	7799767	7799768	chr19:7799768:T:C	rs4804822	T	C	t	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	7799961	7799962	chr19:7799962:A:G	rs944171634	A	G	a	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	7799987	7799988	chr19:7799988:G:A	rs561987858	G	A	-	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr19	7812136	7812137	chr19:7812137:T:C	rs56343757	T	C	-	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	7903385	7903386	chr19:7903386:G:C	rs7248776	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	7.669239287099268	7.243966430829703	CTTAATTACC
chr19	8196850	8196851	chr19:8196851:C:G	rs182849272	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	9.551601409090008	8.239424115594447	TCTAATTAAA
chr19	8478828	8478829	chr19:8478829:C:T	rs11881002	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	8609653	8609654	chr19:8609654:C:T	rs376425202	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr19	9137147	9137148	chr19:9137148:T:C	rs62103608	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	7.846603954486855	1.9196999673267907	TGTAATTAGC
chr19	9323005	9323006	chr19:9323006:C:T	rs10412913	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	9722116	9722117	chr19:9722117:T:C	chr19:9722117:T:C	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.846603954486855	5.239784064638164	TGTAATTAGC
chr19	10353958	10353959	chr19:10353959:C:T	rs72563149	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	10523231	10523232	chr19:10523232:T:A	rs10415923	T	A	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr19	10555703	10555704	chr19:10555704:T:A	rs8113274	T	A	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr19	10856101	10856102	chr19:10856102:C:T	rs67987899	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr19	10961510	10961511	chr19:10961511:A:C	rs991303813	A	C	a	Alx1.mouse_homeodomain_1	3	1	+	7.49200941844807	3.361596724517608	CCCAATTACA
chr19	10961515	10961516	chr19:10961516:C:T	rs76499861	C	T	c	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.147095123247572	CCCAATTACA
chr19	11346436	11346437	chr19:11346437:A:C	chr19:11346437:A:C	A	C	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr19	12283738	12283739	chr19:12283739:G:C	rs73004277	G	C	g	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr19	12507884	12507885	chr19:12507885:A:G	rs7255217	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	12778100	12778101	chr19:12778101:G:A	rs117582232	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr19	12786884	12786885	chr19:12786885:C:T	rs187687247	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr19	13351789	13351790	chr19:13351790:G:A	rs111418768	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	13434516	13434517	chr19:13434517:C:T	rs34088054	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr19	13602556	13602557	chr19:13602557:A:T	rs6511882	A	T	t	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	13602558	13602559	chr19:13602559:C:A	rs6511883	C	A	a	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	14383074	14383075	chr19:14383075:C:T	rs114770399	C	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr19	14640923	14640924	chr19:14640924:A:T	rs8113670	A	T	.	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	14906995	14906996	chr19:14906996:A:T	rs116313769	A	T	-	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	14992905	14992906	chr19:14992906:C:T	rs11669286	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr19	15226973	15226974	chr19:15226974:C:T	rs757291	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr19	15330166	15330167	chr19:15330167:A:G	rs77423438	A	G	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	15409724	15409725	chr19:15409725:G:A	rs12608834	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	15514360	15514361	chr19:15514361:T:C	rs6512042	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	8.570744477099081	3.599064824078339	TCTAATTATA
chr19	15828881	15828882	chr19:15828882:C:T	rs7259139	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr19	15835818	15835819	chr19:15835819:C:T	rs12982687	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	15835843	15835844	chr19:15835844:T:G	rs73927772	T	G	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr19	15837309	15837310	chr19:15837310:T:C	rs1020397839	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	16002804	16002805	chr19:16002805:T:G	rs12609180	T	G	t	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	16182900	16182901	chr19:16182901:G:T	rs140750287	G	T	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	16272855	16272856	chr19:16272856:T:C	rs370978	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	16327503	16327504	chr19:16327504:A:T	rs8810	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	9.133492773520002	5.406011499828394	TTTAATTAAA
chr19	16445410	16445411	chr19:16445411:G:C	rs79083128	G	C	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	16445431	16445432	chr19:16445432:T:C	rs192987877	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr19	16660078	16660079	chr19:16660079:A:C	rs1340385191	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.087347922669274	3.9569352287388115	CCTAATTACC
chr19	17415199	17415200	chr19:17415200:C:G	rs2364551	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	17791777	17791778	chr19:17791778:T:C	rs265547	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	18292945	18292946	chr19:18292946:A:T	rs922335426	A	T	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr19	18299272	18299273	chr19:18299273:G:A	rs149898545	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	18517705	18517706	chr19:18517706:A:T	rs187957	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	18831749	18831750	chr19:18831750:C:T	rs2238652	C	T	-	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	18831772	18831773	chr19:18831773:A:G	rs55824320	A	G	-	Alx1.mouse_homeodomain_1	3	1	+	7.735131894130908	5.1283120042822175	CCCAATTAGC
chr19	18831773	18831774	chr19:18831774:A:G	rs1038423104	A	G	-	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr19	18972518	18972519	chr19:18972519:T:A	rs530304765	T	A	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	19074420	19074421	chr19:19074421:G:A	rs75854698	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.100963547571173	6.364347945116864	GCCAATTAAC
chr19	19532034	19532035	chr19:19532035:C:T	rs561774528	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	19610912	19610913	chr19:19610913:G:A	rs12610185	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr19	19644132	19644133	chr19:19644133:C:T	rs3794996	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	19697443	19697444	chr19:19697444:T:C	rs12981665	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	19764054	19764055	chr19:19764055:C:T	rs7247299	C	T	c	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	19902923	19902924	chr19:19902924:A:G	rs118117744	A	G	-	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	19943936	19943937	chr19:19943937:A:G	rs2215915	A	G	a	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	19943977	19943978	chr19:19943978:A:G	rs571071758	A	G	N	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	19944013	19944014	chr19:19944014:G:A	rs6511061	G	A	a	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr19	20130120	20130121	chr19:20130121:T:A	rs6511081	T	A	.	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	20365204	20365205	chr19:20365205:G:C	rs11669244	G	C	.	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr19	20372111	20372112	chr19:20372112:G:T	rs10410769	G	T	.	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	20533804	20533805	chr19:20533805:G:A	rs7256690	G	A	.	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr19	20777375	20777376	chr19:20777376:G:T	rs12611005	G	T	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	20840445	20840446	chr19:20840446:T:A	rs35739003	T	A	-	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	21031201	21031202	chr19:21031202:T:C	rs12609831	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.8478534449682	6.24103355511951	CCTAATTAGA
chr19	21082952	21082953	chr19:21082953:A:G	rs12973640	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.91565877229958	3.927936856030598	TCTAATTACA
chr19	21358857	21358858	chr19:21358858:T:A	rs118153039	T	A	.	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr19	21397075	21397076	chr19:21397076:G:T	rs77933789	G	T	.	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	21479120	21479121	chr19:21479121:T:C	rs76569820	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr19	21969052	21969053	chr19:21969053:G:A	rs137942945	G	A	g	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr19	23074995	23074996	chr19:23074996:A:T	rs374830899	A	T	-	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	23312713	23312714	chr19:23312714:T:C	rs2438153	T	C	-	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	23316397	23316398	chr19:23316398:G:A	rs12982024	G	A	-	Alx1.mouse_homeodomain_1	8	1	-	6.8080450388704605	6.4631307436699625	CCCAATTACG
chr19	23329379	23329380	chr19:23329380:C:A	rs1820675	C	A	-	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	23851982	23851983	chr19:23851983:C:T	rs7246672	C	T	c	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	24000442	24000443	chr19:24000443:T:C	rs113056431	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	24000458	24000459	chr19:24000459:A:C	chr19:24000459:A:C	A	C	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	24000458	24000459	chr19:24000459:A:T	rs770330129	A	T	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	24040211	24040212	chr19:24040212:T:C	rs11881036	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	24062481	24062482	chr19:24062482:A:C	rs41344050	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	27653591	27653592	chr19:27653592:C:T	rs10426848	C	T	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	27655852	27655853	chr19:27655853:G:A	rs6510199	G	A	.	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr19	27655930	27655931	chr19:27655931:G:T	rs113591162	G	T	.	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	27657199	27657200	chr19:27657200:G:C	rs62108230	G	C	.	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr19	27658891	27658892	chr19:27658892:C:T	rs739775	C	T	.	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	27658897	27658898	chr19:27658898:G:A	rs739776	G	A	.	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	27669802	27669803	chr19:27669803:T:C	rs7255697	T	C	.	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr19	27671376	27671377	chr19:27671377:A:G	rs56256043	A	G	.	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	27676528	27676529	chr19:27676529:G:T	rs142237459	G	T	.	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr19	27678055	27678056	chr19:27678056:G:A	rs62108242	G	A	.	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	27679638	27679639	chr19:27679639:C:T	rs73016617	C	T	.	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr19	27689976	27689977	chr19:27689977:T:G	rs56231645	T	G	.	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	27689980	27689981	chr19:27689981:C:G	rs73016690	C	G	.	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	27716412	27716413	chr19:27716413:G:A	rs917830	G	A	.	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	27735764	27735765	chr19:27735765:T:G	rs150027002	T	G	.	Alx1.mouse_homeodomain_1	4	1	-	9.551601409090008	4.089834758368853	TCTAATTAAA
chr19	27738800	27738801	chr19:27738801:A:G	rs11667490	A	G	.	Alx1.mouse_homeodomain_1	5	1	-	9.551601409090008	4.563879492821026	TCTAATTAAA
chr19	27738809	27738810	chr19:27738810:T:C	rs10419578	T	C	.	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	27740424	27740425	chr19:27740425:C:T	rs866758444	C	T	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	27743573	27743574	chr19:27743574:C:A	rs8107879	C	A	.	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr19	27759179	27759180	chr19:27759180:G:A	rs73024749	G	A	g	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	27769497	27769498	chr19:27769498:G:T	rs6510252	G	T	g	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	27981384	27981385	chr19:27981385:A:G	rs76409043	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.279462745990756	3.2917408297217743	TTCAATTAAA
chr19	28373237	28373238	chr19:28373238:T:C	rs7255848	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	28396340	28396341	chr19:28396341:T:A	rs56159843	T	A	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr19	28406393	28406394	chr19:28406394:A:G	rs1029661	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr19	28406401	28406402	chr19:28406402:C:T	rs7249889	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr19	28603967	28603968	chr19:28603968:G:A	rs4309511	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr19	28904650	28904651	chr19:28904651:A:G	rs17772698	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr19	29026795	29026796	chr19:29026796:C:A	rs8106230	C	A	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	29120469	29120470	chr19:29120470:C:T	rs11670202	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	29368112	29368113	chr19:29368113:C:T	rs1990390	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr19	29374013	29374014	chr19:29374014:T:A	rs79187580	T	A	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr19	29405328	29405329	chr19:29405329:T:C	rs17717387	T	C	t	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr19	29595496	29595497	chr19:29595497:C:G	rs17206101	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	29625221	29625222	chr19:29625222:G:A	rs79583940	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	29796406	29796407	chr19:29796407:G:A	rs62107112	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	29864185	29864186	chr19:29864186:C:G	rs765437542	C	G	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr19	30402187	30402188	chr19:30402188:T:G	rs76960163	T	G	T	Alx1.mouse_homeodomain_1	2	1	+	8.74067261241241	5.741175057917405	TTTAATTAGC
chr19	30561366	30561367	chr19:30561367:A:G	rs4805579	A	G	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr19	30667559	30667560	chr19:30667560:A:G	rs58769168	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.020771222682711	7.451151896360449	TTCAATTAAC
chr19	31109548	31109549	chr19:31109549:A:G	rs571372903	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	31193524	31193525	chr19:31193525:G:A	rs10411730	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	31312344	31312345	chr19:31312345:T:C	chr19:31312345:T:C	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr19	31317629	31317630	chr19:31317630:A:G	rs9304824	A	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	31500945	31500946	chr19:31500946:T:C	rs12973681	T	C	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	32106088	32106089	chr19:32106089:T:C	rs117691759	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr19	32181099	32181100	chr19:32181100:C:T	rs8107818	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr19	32186275	32186276	chr19:32186276:C:T	rs7260548	C	T	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr19	32344284	32344285	chr19:32344285:T:C	rs3760932	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	32483831	32483832	chr19:32483832:A:T	rs1057395	A	T	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr19	32653495	32653496	chr19:32653496:C:T	rs7255287	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	32653533	32653534	chr19:32653534:A:C	rs79232331	A	C	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr19	32700285	32700286	chr19:32700286:C:T	rs8112955	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr19	32724018	32724019	chr19:32724019:G:T	rs28564757	G	T	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr19	32855228	32855229	chr19:32855229:G:A	rs8113166	G	A	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	32885296	32885297	chr19:32885297:G:C	rs58744764	G	C	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	33063202	33063203	chr19:33063203:T:A	rs7258173	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	7.886780097521472	5.168785075314215	TCTAATTATG
chr19	33170545	33170546	chr19:33170546:A:G	rs77341863	A	G	a	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr19	33189616	33189617	chr19:33189617:G:C	rs8111616	G	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	33389093	33389094	chr19:33389094:C:G	rs3786893	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	33478614	33478615	chr19:33478615:T:A	rs7248219	T	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	33552467	33552468	chr19:33552468:C:G	rs12609149	C	G	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr19	33552496	33552497	chr19:33552497:G:A	rs34012271	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	33557401	33557402	chr19:33557402:C:T	rs2278260	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	33622526	33622527	chr19:33622527:C:G	rs62102228	C	G	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	33674515	33674516	chr19:33674516:C:T	rs74605037	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	33687604	33687605	chr19:33687605:G:A	rs75496717	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr19	33867700	33867701	chr19:33867701:A:G	rs7245483	A	G	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	34113353	34113354	chr19:34113354:T:C	rs73593522	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	34308523	34308524	chr19:34308524:A:C	rs179186	A	C	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	34667483	34667484	chr19:34667484:T:C	rs4806034	T	C	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr19	34667504	34667505	chr19:34667505:T:C	rs2902473	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	35196050	35196051	chr19:35196051:C:T	rs4805112	C	T	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr19	35209143	35209144	chr19:35209144:T:C	rs6510472	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.723290559459702	6.1164706696110125	CCTAATTAAC
chr19	35236809	35236810	chr19:35236810:G:A	rs2861488	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	35257802	35257803	chr19:35257803:A:G	rs12979792	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	35374927	35374928	chr19:35374928:A:G	rs11670523	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr19	35716767	35716768	chr19:35716768:G:C	rs375000684	G	C	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	36141754	36141755	chr19:36141755:T:C	rs17884904	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	36254857	36254858	chr19:36254858:G:A	rs4806303	G	A	g	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr19	37865239	37865240	chr19:37865240:A:G	rs17249138	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr19	37959858	37959859	chr19:37959859:T:C	rs353421	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	37971516	37971517	chr19:37971517:A:G	rs1725480	A	G	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	38078997	38078998	chr19:38078998:A:G	rs1725461	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.879478364183603	2.907798711162862	TCCAATTAGG
chr19	38267969	38267970	chr19:38267970:C:T	rs73037307	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	38515628	38515629	chr19:38515629:A:C	rs59591700	A	C	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	38666692	38666693	chr19:38666693:A:G	rs188292203	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.886642584883163	2.914962931862422	TTCAATTAGC
chr19	38698830	38698831	chr19:38698831:G:A	rs959413846	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr19	38744871	38744872	chr19:38744872:T:C	rs10421863	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr19	38744898	38744899	chr19:38744899:T:A	rs112687713	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	39104605	39104606	chr19:39104606:G:A	rs4533402	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	39195228	39195229	chr19:39195229:A:C	rs8103222	A	C	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr19	39803151	39803152	chr19:39803152:A:G	rs114968776	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr19	39937085	39937086	chr19:39937086:T:C	rs3760919	T	C	.	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr19	39951737	39951738	chr19:39951738:G:C	rs234334	G	C	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr19	40312782	40312783	chr19:40312783:G:A	rs66623822	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	40420553	40420554	chr19:40420554:C:G	rs7251476	C	G	c	Alx1.mouse_homeodomain_1	8	1	-	7.735131894130908	7.233317895140026	CCCAATTAGC
chr19	40804665	40804666	chr19:40804666:A:G	rs3733829	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	41564773	41564774	chr19:41564774:G:A	rs782231997	G	A	-	Alx1.mouse_homeodomain_1	1	1	-	8.422165645528107	8.004057009958101	TCTAATTAGT
chr19	42401492	42401493	chr19:42401493:C:G	rs36024215	C	G	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	42515710	42515711	chr19:42515711:G:T	rs10404589	G	T	t	Alx1.mouse_homeodomain_1	9	1	-	9.292909885781963	9.551601409090008	TCTAATTAAC
chr19	42926792	42926793	chr19:42926793:G:A	rs59007873	G	A	.	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr19	43104140	43104141	chr19:43104141:A:G	rs61527144	A	G	.	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	43469527	43469528	chr19:43469528:C:G	rs35269756	C	G	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr19	43633829	43633830	chr19:43633830:G:T	rs2079646	G	T	g	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr19	43669996	43669997	chr19:43669997:C:T	rs115313724	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	43670028	43670029	chr19:43670029:C:T	rs369947389	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr19	43791853	43791854	chr19:43791854:A:G	rs12974061	A	G	g	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	44401943	44401944	chr19:44401944:C:T	rs2571148	C	T	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr19	44548137	44548138	chr19:44548138:G:A	rs1348182	G	A	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	44576559	44576560	chr19:44576560:C:T	rs846877	C	T	t	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr19	44692042	44692043	chr19:44692043:T:G	rs16979372	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	45379703	45379704	chr19:45379704:T:A	rs6966	T	A	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	45527815	45527816	chr19:45527816:A:G	rs142545664	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	45764797	45764798	chr19:45764798:C:T	rs1046835709	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr19	45866255	45866256	chr19:45866256:A:T	rs76069409	A	T	a	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr19	45977148	45977149	chr19:45977149:T:C	rs4239537	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr19	46226040	46226041	chr19:46226041:G:A	rs2017924	G	A	g	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	46227356	46227357	chr19:46227357:A:G	rs1008591	A	G	a	Alx1.mouse_homeodomain_1	5	1	-	7.993823417438953	3.006101501169972	CCCAATTAGA
chr19	46449537	46449538	chr19:46449538:G:C	rs7249676	G	C	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr19	46711763	46711764	chr19:46711764:A:C	rs117806894	A	C	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr19	46866495	46866496	chr19:46866496:G:C	rs11669769	G	C	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr19	46875714	46875715	chr19:46875715:A:C	rs10408213	A	C	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr19	46875756	46875757	chr19:46875757:G:A	rs8103985	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	46984566	46984567	chr19:46984567:G:A	rs751322109	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr19	47110868	47110869	chr19:47110869:A:G	rs150755174	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	47111803	47111804	chr19:47111804:G:A	rs1382932708	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr19	47305540	47305541	chr19:47305541:G:C	rs11671717	G	C	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	47305570	47305571	chr19:47305571:T:G	rs7253663	T	G	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr19	47420207	47420208	chr19:47420208:T:C	rs76302421	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	47420723	47420724	chr19:47420724:C:A	rs67165745	C	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr19	47892395	47892396	chr19:47892396:C:T	rs2910398	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	48608871	48608872	chr19:48608872:A:T	rs530567373	A	T	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	48608911	48608912	chr19:48608912:T:G	rs938011402	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	48812727	48812728	chr19:48812728:C:T	rs58129411	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	48812734	48812735	chr19:48812735:C:T	rs3760788	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	48881014	48881015	chr19:48881015:T:C	rs115388116	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.145334108191209	3.1736544551704666	TTCAATTAGA
chr19	49235224	49235225	chr19:49235225:C:T	rs1177825	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	49533376	49533377	chr19:49533377:G:T	rs79476680	G	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr19	49953512	49953513	chr19:49953513:T:A	rs8107645	T	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	50025796	50025797	chr19:50025797:C:T	rs4802648	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr19	50027177	50027178	chr19:50027178:C:T	rs3760717	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	50191974	50191975	chr19:50191975:T:A	rs590087	T	A	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	50300993	50300994	chr19:50300994:G:A	rs117143947	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr19	50588568	50588569	chr19:50588569:G:A	rs139783865	G	A	g	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	51074714	51074715	chr19:51074715:G:A	rs189227889	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr19	51248803	51248804	chr19:51248804:T:G	rs273646	T	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	51335590	51335591	chr19:51335591:G:C	rs11084068	G	C	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr19	51475992	51475993	chr19:51475993:C:A	rs61201251	C	A	c	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	51669339	51669340	chr19:51669340:C:A	rs12461881	C	A	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	52049745	52049746	chr19:52049746:T:C	rs3450	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	7.927930810407313	5.030836301070936	CTTAATTACA
chr19	52664567	52664568	chr19:52664568:C:T	rs67885014	C	T	c	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr19	52728874	52728875	chr19:52728875:G:A	rs10853854	G	A	g	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr19	52796215	52796216	chr19:52796216:G:C	rs79767538	G	C	g	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	52796221	52796222	chr19:52796222:A:G	rs73067535	A	G	a	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	52963150	52963151	chr19:52963151:G:A	rs187857443	G	A	g	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr19	53652603	53652604	chr19:53652604:G:A	rs115585642	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr19	53652611	53652612	chr19:53652612:G:C	rs7257758	G	C	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr19	53978465	53978466	chr19:53978466:G:T	rs537065964	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	6.9668349097716264	7.225526433079671	GCCAATTAGC
chr19	54103655	54103656	chr19:54103656:A:G	rs188697440	A	G	a	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr19	54255238	54255239	chr19:54255239:A:G	rs393600	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	54278733	54278734	chr19:54278734:T:C	rs586206	T	C	t	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr19	54278764	54278765	chr19:54278765:G:A	rs10404452	G	A	g	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	54653562	54653563	chr19:54653563:G:A	rs112506936	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr19	55464998	55464999	chr19:55464999:C:T	rs56412426	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	55611485	55611486	chr19:55611486:A:C	chr19:55611486:A:C	A	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr19	55611485	55611486	chr19:55611486:A:T	rs310466	A	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr19	55624738	55624739	chr19:55624739:C:G	chr19:55624739:C:G	C	G	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	55653278	55653279	chr19:55653279:G:A	rs184498111	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	55653304	55653305	chr19:55653305:C:T	rs28375493	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr19	55770491	55770492	chr19:55770492:T:C	rs12462664	T	C	t	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr19	56073715	56073716	chr19:56073716:C:T	rs55764155	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr19	56131997	56131998	chr19:56131998:T:C	rs12981138	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	56266175	56266176	chr19:56266176:C:T	rs34176845	C	T	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	56863694	56863695	chr19:56863695:A:G	rs11881055	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr19	56910961	56910962	chr19:56910962:A:G	rs7259442	A	G	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr19	57057437	57057438	chr19:57057438:T:C	rs62132636	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr19	57057439	57057440	chr19:57057440:G:T	rs12971633	G	T	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr19	57350774	57350775	chr19:57350775:A:G	rs59110325	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	7.846603954486855	6.992573926957609	TGTAATTAGC
chr19	57499273	57499274	chr19:57499274:T:C	rs7255481	T	C	c	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr19	57552958	57552959	chr19:57552959:T:G	rs73060407	T	G	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr19	57632664	57632665	chr19:57632665:G:A	rs144668594	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	57632680	57632681	chr19:57632681:A:T	rs10418967	A	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	57651768	57651769	chr19:57651769:C:T	rs12608549	C	T	c	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr19	57696016	57696017	chr19:57696017:T:C	rs1009158	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	57827591	57827592	chr19:57827592:A:G	rs4480910	A	G	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr19	58017252	58017253	chr19:58017253:A:G	rs1549279	A	G	g	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr19	58022241	58022242	chr19:58022242:A:G	rs77222313	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	357793	357794	chr2:357794:A:G	rs1511323	A	G	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	458756	458757	chr2:458757:A:G	rs11904800	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	589545	589546	chr2:589546:G:A	rs13420040	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.17105328609015	8.74067261241241	CTTAATTAGC
chr2	762695	762696	chr2:762696:G:A	rs79753112	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.563442743761213	8.145334108191209	TCCAATTAGA
chr2	773277	773278	chr2:773278:C:T	rs4380275	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	824752	824753	chr2:824753:T:C	rs12467306	T	C	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	1131234	1131235	chr2:1131235:G:A	rs6749224	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	1161783	1161784	chr2:1161784:T:C	rs4971400	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	1244149	1244150	chr2:1244150:G:T	rs28549763	G	T	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	1312247	1312248	chr2:1312248:C:A	rs9678814	C	A	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	1408509	1408510	chr2:1408510:A:C	rs11685159	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	8.656967248991535	7.319050938309992	TCTAATTACC
chr2	1489831	1489832	chr2:1489832:G:T	rs13413321	G	T	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	1613125	1613126	chr2:1613126:C:T	rs67712098	C	T	T	Alx1.mouse_homeodomain_1	8	1	-	7.993823417438953	8.1279520552385	CCCAATTAGA
chr2	1715339	1715340	chr2:1715340:T:C	rs60041175	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	1730708	1730709	chr2:1730709:C:T	rs139128996	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	1817211	1817212	chr2:1817212:A:G	rs74818258	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	2531146	2531147	chr2:2531147:G:T	rs6727538	G	T	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	2769725	2769726	chr2:2769726:G:A	rs568367071	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	3319310	3319311	chr2:3319311:A:G	rs34842466	A	G	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	3492778	3492779	chr2:3492779:C:G	rs112016091	C	G	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	3492790	3492791	chr2:3492791:A:G	rs74531064	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.346039445977318	5.448944936640942	CCTAATTACA
chr2	3514436	3514437	chr2:3514437:G:C	rs6605293	G	C	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	3584881	3584882	chr2:3584882:A:G	rs112620398	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	3953898	3953899	chr2:3953899:T:C	chr2:3953899:T:C	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.346039445977318	7.662075066399709	CCTAATTACA
chr2	6748783	6748784	chr2:6748784:C:G	rs6431824	C	G	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	6750970	6750971	chr2:6750971:T:C	rs186946801	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	7023169	7023170	chr2:7023170:G:A	rs114594834	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	7196123	7196124	chr2:7196124:G:A	rs115481937	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.940983387749356	8.075112025548904	ACTAATTAGC
chr2	7356275	7356276	chr2:7356276:C:T	rs55734018	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	7737874	7737875	chr2:7737875:A:G	rs78385145	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	7737882	7737883	chr2:7737883:C:T	rs76589088	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	7880170	7880171	chr2:7880171:G:A	rs6736951	G	A	a	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	7964193	7964194	chr2:7964194:G:A	rs74910875	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	8447712	8447713	chr2:8447713:G:A	rs146424500	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	8448944	8448945	chr2:8448945:G:A	rs528338613	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	8543790	8543791	chr2:8543791:C:A	rs11900755	C	A	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	8543814	8543815	chr2:8543815:C:T	rs143033016	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	7.233317895140026	6.4967022926857165	CCCAATTACC
chr2	8753877	8753878	chr2:8753878:C:A	rs9287701	C	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	8858029	8858030	chr2:8858030:C:A	rs116554173	C	A	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	9175463	9175464	chr2:9175464:A:T	rs4669379	A	T	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	9215987	9215988	chr2:9215988:C:A	rs2666205	C	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	9285976	9285977	chr2:9285977:T:C	rs62121298	T	C	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	9631225	9631226	chr2:9631226:G:A	chr2:9631226:G:A	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	9700231	9700232	chr2:9700232:G:A	rs12467340	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	9740697	9740698	chr2:9740698:A:G	rs11674024	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	9967678	9967679	chr2:9967679:C:T	rs116829492	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	10556640	10556641	chr2:10556641:T:A	rs1279939754	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	10556661	10556662	chr2:10556662:T:C	rs2357649	T	C	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	10580740	10580741	chr2:10580741:G:A	rs10208103	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	11375292	11375293	chr2:11375293:C:T	rs117112822	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	11375303	11375304	chr2:11375304:T:C	rs56252168	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	11470787	11470788	chr2:11470788:G:C	rs76675986	G	C	G	Alx1.mouse_homeodomain_1	9	1	+	8.01360700198315	8.438879858252715	TCCAATTAAG
chr2	12006089	12006090	chr2:12006090:G:C	rs80072084	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	12120254	12120255	chr2:12120255:A:G	rs1034761720	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	12176980	12176981	chr2:12176981:C:G	chr2:12176981:C:G	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	12177003	12177004	chr2:12177004:G:A	rs10176357	G	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr2	12441023	12441024	chr2:12441024:C:G	rs6715765	C	G	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	12487602	12487603	chr2:12487603:A:G	rs11680430	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	12499007	12499008	chr2:12499008:A:G	rs76622659	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	12669216	12669217	chr2:12669217:A:C	rs62124709	A	C	A	Alx1.mouse_homeodomain_1	5	1	-	8.01360700198315	1.7246277672801908	TCCAATTAAG
chr2	13052722	13052723	chr2:13052723:G:A	rs1878156	G	A	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	13696043	13696044	chr2:13696044:T:C	rs2048401	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	14206517	14206518	chr2:14206518:C:T	rs10929904	C	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	14555675	14555676	chr2:14555676:C:T	rs34677113	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	15040973	15040974	chr2:15040974:C:T	rs11682432	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	15562384	15562385	chr2:15562385:T:C	rs115588242	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	15562407	15562408	chr2:15562408:G:A	rs73915379	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	15677641	15677642	chr2:15677642:C:G	rs7608602	C	G	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	15677643	15677644	chr2:15677644:T:C	rs57374461	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	15971320	15971321	chr2:15971321:G:A	rs4233849	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	16025861	16025862	chr2:16025862:C:G	rs12478838	C	G	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	16227377	16227378	chr2:16227378:G:C	rs6734142	G	C	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	16443178	16443179	chr2:16443179:G:A	rs7606503	G	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	16636276	16636277	chr2:16636277:C:T	rs2342436	C	T	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	16679068	16679069	chr2:16679069:G:T	rs73215550	G	T	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	17332325	17332326	chr2:17332326:A:C	rs62125597	A	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	17643279	17643280	chr2:17643280:A:G	rs186144590	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.867637029512398	2.940733042352334	TCTAATTAAG
chr2	18047271	18047272	chr2:18047272:T:C	rs7588918	T	C	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	18092326	18092327	chr2:18092327:T:C	rs2345098	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	8.656967248991535	8.087347922669274	TCTAATTACC
chr2	18172736	18172737	chr2:18172737:C:A	rs767907964	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.305181923889696	7.657003389978898	CTTAATTAAC
chr2	18266237	18266238	chr2:18266238:C:A	rs6744889	C	A	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	18378130	18378131	chr2:18378131:C:T	rs184597122	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.74067261241241	8.004057009958101	TTTAATTAGC
chr2	18780582	18780583	chr2:18780583:T:C	rs7599089	T	C	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	18780590	18780591	chr2:18780591:C:T	rs13339828	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	19363053	19363054	chr2:19363054:T:C	chr2:19363054:T:C	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.23885861342153	2.311954626261465	TTTAATTACC
chr2	20051777	20051778	chr2:20051778:G:A	rs1233855570	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	20198533	20198534	chr2:20198534:G:A	rs72783289	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	20485392	20485393	chr2:20485393:T:C	rs342072	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr2	20485420	20485421	chr2:20485421:T:C	rs342071	T	C	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	21290398	21290399	chr2:21290399:G:A	rs56286635	G	A	g	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	22248879	22248880	chr2:22248880:A:G	rs58252706	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	22333931	22333932	chr2:22333932:T:G	rs4277554	T	G	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr2	22442175	22442176	chr2:22442176:C:T	rs1876766	C	T	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	22515669	22515670	chr2:22515670:G:T	rs6729322	G	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	22515707	22515708	chr2:22515708:G:A	rs12712505	G	A	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	22533088	22533089	chr2:22533089:T:C	rs13432882	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	22557691	22557692	chr2:22557692:C:G	rs11124553	C	G	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	22690376	22690377	chr2:22690377:C:T	rs76628950	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	23285994	23285995	chr2:23285995:C:T	rs751029	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	23549460	23549461	chr2:23549461:T:C	rs4665221	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	23850939	23850940	chr2:23850940:C:T	rs77400814	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	23962939	23962940	chr2:23962940:G:T	rs140101741	G	T	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	24317721	24317722	chr2:24317722:T:C	rs2551122	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	24435671	24435672	chr2:24435672:C:A	chr2:24435672:C:A	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	25701097	25701098	chr2:25701098:T:C	rs6546385	T	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	25867784	25867785	chr2:25867785:G:A	rs10205527	G	A	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	25867784	25867785	chr2:25867785:G:C	chr2:25867785:G:C	G	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	25938624	25938625	chr2:25938625:G:C	rs533436031	G	C	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	26013876	26013877	chr2:26013877:C:A	rs143149202	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.867637029512398	7.274325103344613	TCTAATTAAG
chr2	26605903	26605904	chr2:26605904:T:A	rs116131398	T	A	T	Alx1.mouse_homeodomain_1	0	1	+	8.874801250211958	7.657003389978898	TTTAATTAAC
chr2	27011273	27011274	chr2:27011274:C:G	rs191385633	C	G	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	28281282	28281283	chr2:28281283:G:C	rs870969	G	C	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	28720998	28720999	chr2:28720999:C:T	rs34409160	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	28802612	28802613	chr2:28802613:A:G	rs3190	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	28986169	28986170	chr2:28986170:C:T	rs7602523	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	29209242	29209243	chr2:29209243:T:C	rs115577214	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.298017703190137	3.310295786921156	CCTAATTAAG
chr2	29229119	29229120	chr2:29229120:C:T	rs62130588	C	T	c	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	29281925	29281926	chr2:29281926:C:T	rs13422564	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	29622318	29622319	chr2:29622319:T:C	rs190612168	T	C	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	29766081	29766082	chr2:29766082:A:G	rs2541179	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.74067261241241	2.813768625252347	TTTAATTAGC
chr2	29790229	29790230	chr2:29790230:G:A	rs2879482	G	A	A	Alx1.mouse_homeodomain_1	8	1	-	8.23169439272197	7.886780097521472	TCTAATTACG
chr2	29834287	29834288	chr2:29834288:A:G	rs80329843	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	3.022143764418211	CCCAATTAGA
chr2	30070789	30070790	chr2:30070790:C:T	rs76836927	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	30110353	30110354	chr2:30110354:A:G	rs72783696	A	G	a	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	30165089	30165090	chr2:30165090:T:C	rs994839122	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	8.279462745990756	TTTAATTAAA
chr2	30269039	30269040	chr2:30269040:G:C	rs141934083	G	C	C	Alx1.mouse_homeodomain_1	8	1	-	8.087347922669274	8.589161921660155	CCTAATTACC
chr2	30281120	30281121	chr2:30281121:C:G	rs72787741	C	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	30694416	30694417	chr2:30694417:A:C	rs111735982	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	7.802937221462287	3.672524527531825	TCCAATTACC
chr2	30738155	30738156	chr2:30738156:C:G	rs55799526	C	G	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	31397230	31397231	chr2:31397231:C:A	rs117082837	C	A	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	31945854	31945855	chr2:31945855:T:G	rs62142074	T	G	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	32851738	32851739	chr2:32851739:G:T	rs549444949	G	T	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	32946845	32946846	chr2:32946846:A:G	rs112209471	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	7.309859037861343	1.3829550507012782	CCCAATTAGG
chr2	32970272	32970273	chr2:32970273:G:C	rs219032	G	C	G	Alx1.mouse_homeodomain_1	0	1	-	8.981982082767747	8.213685098408467	CCTAATTAAA
chr2	33247649	33247650	chr2:33247650:T:C	rs528993117	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	7.9549935751004215	7.100963547571173	GCTAATTAAC
chr2	33277177	33277178	chr2:33277178:T:A	rs77008556	T	A	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	33427034	33427035	chr2:33427035:G:T	rs12472223	G	T	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	33427036	33427037	chr2:33427037:T:G	rs12712339	T	G	T	Alx1.mouse_homeodomain_1	0	1	+	9.133492773520002	7.7955764628384605	TTTAATTAAA
chr2	33438041	33438042	chr2:33438042:A:G	rs6718472	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	33706549	33706550	chr2:33706550:G:T	rs7585657	G	T	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	33788280	33788281	chr2:33788281:A:G	rs57588016	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	34012034	34012035	chr2:34012035:A:G	rs10197794	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	34031528	34031529	chr2:34031529:A:C	rs146563759	A	C	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	34893247	34893248	chr2:34893248:A:G	rs280777	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	34893260	34893261	chr2:34893261:G:A	rs280776	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	35293279	35293280	chr2:35293280:A:C	rs6710170	A	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	35317004	35317005	chr2:35317005:A:G	rs13394745	A	G	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	35460233	35460234	chr2:35460234:C:T	rs12712439	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	35460262	35460263	chr2:35460263:G:A	rs2719088	G	A	A	Alx1.mouse_homeodomain_1	0	1	-	8.981982082767747	9.551601409090008	CCTAATTAAA
chr2	35506983	35506984	chr2:35506984:G:A	rs12712442	G	A	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	35822207	35822208	chr2:35822208:C:A	rs11687453	C	A	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	35906559	35906560	chr2:35906560:A:G	rs2091122	A	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	36054956	36054957	chr2:36054957:T:G	rs914755213	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	7.802937221462287	2.98780482857835	TCCAATTACC
chr2	36490980	36490981	chr2:36490981:G:C	rs848538	G	C	C	Alx1.mouse_homeodomain_1	9	1	+	8.867637029512398	9.292909885781963	TCTAATTAAG
chr2	36983111	36983112	chr2:36983112:C:T	rs62133071	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.69757138156076	9.551601409090008	TCCAATTAAA
chr2	37151286	37151287	chr2:37151287:C:A	rs75116944	C	A	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	37387403	37387404	chr2:37387404:G:T	rs10165491	G	T	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	37387404	37387405	chr2:37387405:T:C	rs870804	T	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	37587876	37587877	chr2:37587877:A:T	rs983895	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	37664745	37664746	chr2:37664746:G:C	rs4670755	G	C	c	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	37733469	37733470	chr2:37733470:A:T	rs17511102	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	7.9549935751004215	2.5310117778840655	GCTAATTAAC
chr2	37872734	37872735	chr2:37872735:T:C	rs2565638	T	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	38167432	38167433	chr2:38167433:G:T	rs11688391	G	T	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	38527195	38527196	chr2:38527196:A:G	rs7349425	A	G	-	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	38671538	38671539	chr2:38671539:C:A	rs13019170	C	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	39219331	39219332	chr2:39219332:C:T	rs145186690	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	39346586	39346587	chr2:39346587:C:T	rs1049230864	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	7.879478364183603	8.563442743761213	TCCAATTAGG
chr2	39413336	39413337	chr2:39413337:G:A	rs73924007	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	39495294	39495295	chr2:39495295:A:G	rs75473507	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	39676322	39676323	chr2:39676323:T:C	rs2716687	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	39772863	39772864	chr2:39772864:T:G	rs72787316	T	G	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	39902412	39902413	chr2:39902413:T:G	rs7565203	T	G	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	39913892	39913893	chr2:39913893:G:A	rs17024597	G	A	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	39954642	39954643	chr2:39954643:G:A	rs10490338	G	A	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr2	40039720	40039721	chr2:40039721:C:A	rs143380212	C	A	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	40148108	40148109	chr2:40148109:T:C	rs2888657	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr2	40203886	40203887	chr2:40203887:T:A	rs423066	T	A	t	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	40364048	40364049	chr2:40364049:C:G	rs6544331	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	40384460	40384461	chr2:40384461:C:T	rs6747285	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	40410641	40410642	chr2:40410642:T:C	rs2160238	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	40482265	40482266	chr2:40482266:T:C	rs17026071	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	9.292909885781963	6.395815376445587	TCTAATTAAC
chr2	40554777	40554778	chr2:40554778:C:G	rs138009025	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	40554800	40554801	chr2:40554801:G:T	rs143564104	G	T	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	40639595	40639596	chr2:40639596:C:G	rs114941610	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	41040019	41040020	chr2:41040020:G:C	rs150634556	G	C	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	41127581	41127582	chr2:41127582:A:G	rs11901869	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	41329301	41329302	chr2:41329302:C:A	rs7569590	C	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	41861666	41861667	chr2:41861667:T:C	rs6544486	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	41906889	41906890	chr2:41906890:T:G	rs17028992	T	G	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	41910152	41910153	chr2:41910153:T:G	rs6749233	T	G	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr2	42041834	42041835	chr2:42041835:A:G	rs12475676	A	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	42132834	42132835	chr2:42132835:A:G	rs76019562	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	42171972	42171973	chr2:42171973:C:G	rs923393745	C	G	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	42171977	42171978	chr2:42171978:A:G	rs116400752	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	42752865	42752866	chr2:42752866:A:G	rs77598035	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	43081865	43081866	chr2:43081866:G:A	rs774476863	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	43175538	43175539	chr2:43175539:G:A	rs78580000	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	43218002	43218003	chr2:43218003:C:T	rs78379479	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	43218309	43218310	chr2:43218310:A:C	rs11885281	A	C	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	43312985	43312986	chr2:43312986:T:G	rs7590268	T	G	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	43315639	43315640	chr2:43315640:A:T	rs11678902	A	T	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	43367349	43367350	chr2:43367350:A:T	rs11124930	A	T	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	43400130	43400131	chr2:43400131:A:G	rs73923595	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	43835146	43835147	chr2:43835147:C:T	rs13396273	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	7.662075066399709	8.346039445977318	CCTAATTACG
chr2	44360511	44360512	chr2:44360512:A:G	rs1409158561	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr2	44577797	44577798	chr2:44577798:A:T	rs6742115	A	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	44577814	44577815	chr2:44577815:C:G	rs6713636	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.1279520552385	6.815774761742937	CCCAATTAAA
chr2	45207332	45207333	chr2:45207333:C:A	rs61681975	C	A	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	45337658	45337659	chr2:45337659:T:G	rs13430405	T	G	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	45337663	45337664	chr2:45337664:G:A	rs10196925	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	45576955	45576956	chr2:45576956:G:T	rs72618607	G	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	45616869	45616870	chr2:45616870:T:G	rs1608305	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	7.802937221462287	1.5139579867593276	TCCAATTACC
chr2	45767125	45767126	chr2:45767126:C:T	rs150172435	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	45978157	45978158	chr2:45978158:A:C	rs2595210	A	C	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	46076460	46076461	chr2:46076461:A:G	rs77962170	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	46090951	46090952	chr2:46090952:T:C	rs74461210	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	46299860	46299861	chr2:46299861:T:C	rs79912671	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	46363790	46363791	chr2:46363791:C:T	chr2:46363791:C:T	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	46414815	46414816	chr2:46414816:A:G	rs2881327	A	G	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	46550068	46550069	chr2:46550069:T:A	rs4953400	T	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	46572712	46572713	chr2:46572713:G:T	rs1451153	G	T	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	46663044	46663045	chr2:46663045:A:G	rs35731375	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	46663048	46663049	chr2:46663049:G:A	rs75948047	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	46905915	46905916	chr2:46905916:T:C	rs11890177	T	C	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	47093152	47093153	chr2:47093153:T:C	rs10176665	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	7.49200941844807	4.88518952859938	CCCAATTACA
chr2	47298658	47298659	chr2:47298659:T:C	rs4401255	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.49200941844807	2.5203297654273293	CCCAATTACA
chr2	47307173	47307174	chr2:47307174:A:G	rs77724614	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	47374117	47374118	chr2:47374118:T:C	rs4399765	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	47662541	47662542	chr2:47662542:A:T	rs12328344	A	T	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	47698346	47698347	chr2:47698347:T:C	rs376717874	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	47784166	47784167	chr2:47784167:G:C	rs114642331	G	C	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	48185378	48185379	chr2:48185379:T:C	chr2:48185379:T:C	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr2	48406859	48406860	chr2:48406860:G:A	rs34035161	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	48759939	48759940	chr2:48759940:T:C	rs2956359	T	C	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	49041140	49041141	chr2:49041141:G:A	rs72827284	G	A	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	49336702	49336703	chr2:49336703:A:G	rs6722211	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	49360183	49360184	chr2:49360184:A:G	rs2556406	A	G	G	Alx1.mouse_homeodomain_1	8	1	+	8.981982082767747	8.8478534449682	CCTAATTAAA
chr2	49360203	49360204	chr2:49360204:G:C	rs59599378	G	C	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	49763229	49763230	chr2:49763230:C:T	rs1518823	C	T	c	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	50223646	50223647	chr2:50223647:G:T	rs1520528	G	T	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	50261089	50261090	chr2:50261090:C:G	rs11686497	C	G	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr2	50529223	50529224	chr2:50529224:C:T	rs114260905	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	50727706	50727707	chr2:50727707:G:A	rs858948	G	A	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	50727732	50727733	chr2:50727733:C:T	rs12991070	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	50897685	50897686	chr2:50897686:A:T	rs72823558	A	T	T	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.6228028348228563	TCCAATTAAA
chr2	50897709	50897710	chr2:50897710:A:G	rs62140644	A	G	a	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	51675744	51675745	chr2:51675745:A:C	rs9309216	A	C	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	51693798	51693799	chr2:51693799:T:A	rs12691185	T	A	N	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	51723900	51723901	chr2:51723901:T:A	rs28967889	T	A	T	Alx1.mouse_homeodomain_1	8	1	-	7.869260531930455	6.888403599939528	CCCAATTAAC
chr2	51723907	51723908	chr2:51723908:G:A	rs11691890	G	A	A	Alx1.mouse_homeodomain_1	1	1	-	7.869260531930455	7.451151896360449	CCCAATTAAC
chr2	52036404	52036405	chr2:52036405:C:A	rs6736402	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	9.417472771290461	7.824160845122676	TCTAATTAGA
chr2	52110084	52110085	chr2:52110085:A:G	rs13000461	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	52595672	52595673	chr2:52595673:T:G	rs952261	T	G	G	Alx1.mouse_homeodomain_1	8	1	-	8.723290559459702	8.087347922669274	CCTAATTAAC
chr2	52961692	52961693	chr2:52961693:T:C	rs545349370	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	53309728	53309729	chr2:53309729:A:T	rs2161782	A	T	a	Alx1.mouse_homeodomain_1	7	1	+	8.1279520552385	5.409957033031244	CCCAATTAAA
chr2	53452589	53452590	chr2:53452590:G:A	rs1521928	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	53452613	53452614	chr2:53452614:T:C	rs1521927	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr2	53452617	53452618	chr2:53452618:G:A	rs77907809	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	7.735131894130908	8.304751220453168	CCCAATTAGC
chr2	53525704	53525705	chr2:53525705:A:G	rs12463516	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	53856566	53856567	chr2:53856567:T:A	rs3770389	T	A	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	53863898	53863899	chr2:53863899:T:C	rs805377	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	54382756	54382757	chr2:54382757:G:A	rs578075550	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	54387738	54387739	chr2:54387739:C:G	rs142888625	C	G	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	54481790	54481791	chr2:54481791:G:C	rs13390258	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	54571392	54571393	chr2:54571393:A:G	rs1000289240	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	54613188	54613189	chr2:54613189:A:G	rs12475598	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	54676922	54676923	chr2:54676923:A:G	rs78857342	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	54999402	54999403	chr2:54999403:T:C	rs17046573	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	55000209	55000210	chr2:55000210:G:C	rs7340476	G	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	55000238	55000239	chr2:55000239:C:G	rs13387751	C	G	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	55000246	55000247	chr2:55000247:G:T	rs34928331	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	55080386	55080387	chr2:55080387:C:T	rs10184478	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	55491025	55491026	chr2:55491026:C:T	rs920973725	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	7.662075066399709	8.346039445977318	CCTAATTACG
chr2	55841897	55841898	chr2:55841898:C:T	rs4519567	C	T	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	56544499	56544500	chr2:56544500:T:C	rs7605708	T	C	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	56559457	56559458	chr2:56559458:G:A	rs116654285	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	56801950	56801951	chr2:56801951:G:A	rs115556298	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	58709834	58709835	chr2:58709835:C:T	rs10211534	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	58762744	58762745	chr2:58762745:G:A	rs77217059	G	A	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	59485672	59485673	chr2:59485673:C:T	rs72951297	C	T	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr2	59744532	59744533	chr2:59744533:A:G	rs57910953	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	59878690	59878691	chr2:59878691:G:C	rs113049808	G	C	G	Alx1.mouse_homeodomain_1	0	1	-	8.298017703190137	7.529720718830856	CCTAATTAAG
chr2	60116558	60116559	chr2:60116559:T:C	rs4671370	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr2	60290163	60290164	chr2:60290164:G:A	rs7598252	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	60366269	60366270	chr2:60366270:G:A	rs173374	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	60548684	60548685	chr2:60548685:T:C	rs1427409	T	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	60603177	60603178	chr2:60603178:A:C	chr2:60603178:A:C	A	C	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	61126067	61126068	chr2:61126068:C:T	rs180739218	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	61190481	61190482	chr2:61190482:A:G	rs777591	A	G	G	Alx1.mouse_homeodomain_1	2	1	-	8.422165645528107	7.568135617998859	TCTAATTAGT
chr2	62179149	62179150	chr2:62179150:G:C	rs1460343610	G	C	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	62179178	62179179	chr2:62179179:C:T	rs187769983	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	62335647	62335648	chr2:62335648:A:G	rs56051730	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	62569594	62569595	chr2:62569595:A:G	rs11676434	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	63288188	63288189	chr2:63288189:C:T	rs913353657	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	64017987	64017988	chr2:64017988:G:A	rs190145950	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	64459736	64459737	chr2:64459737:A:T	rs11890687	A	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	64858349	64858350	chr2:64858350:C:T	rs1017527564	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	64858356	64858357	chr2:64858357:G:A	rs11126022	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	65132184	65132185	chr2:65132185:T:G	rs71424163	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	8.874801250211958	2.5858220155089984	TTTAATTAAC
chr2	66070473	66070474	chr2:66070474:T:C	rs11675929	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr2	66436059	66436060	chr2:66436060:A:G	rs114427363	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.874801250211958	8.020771222682711	TTTAATTAAC
chr2	66447519	66447520	chr2:66447520:A:G	rs79238382	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr2	66554293	66554294	chr2:66554294:A:T	rs76205499	A	T	A	Alx1.mouse_homeodomain_1	4	1	+	8.298017703190137	3.223249156452232	CCTAATTAAG
chr2	66940298	66940299	chr2:66940299:T:C	rs1362479	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	66985823	66985824	chr2:66985824:G:C	rs6739237	G	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	67798672	67798673	chr2:67798673:C:T	rs13422689	C	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	68263837	68263838	chr2:68263838:T:A	rs12713637	T	A	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	68591536	68591537	chr2:68591537:A:T	rs77631719	A	T	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	68654459	68654460	chr2:68654460:A:C	rs6731830	A	C	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	69103341	69103342	chr2:69103342:C:T	rs58760592	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	69180587	69180588	chr2:69180588:T:G	rs10173269	T	G	g	Alx1.mouse_homeodomain_1	2	1	+	8.305181923889696	5.305684369394691	CTTAATTAAC
chr2	69217448	69217449	chr2:69217449:T:C	rs11680427	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	69217482	69217483	chr2:69217483:G:A	rs4358157	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	69349014	69349015	chr2:69349015:G:C	rs4549136	G	C	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	69668113	69668114	chr2:69668114:C:T	rs116455774	C	T	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	69668119	69668120	chr2:69668120:G:A	rs12468574	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	69712519	69712520	chr2:69712520:A:G	rs884594	A	G	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	69781359	69781360	chr2:69781360:C:G	rs7590609	C	G	C	Alx1.mouse_homeodomain_1	9	1	+	9.158781247982416	8.733508391712851	TCTAATTAGC
chr2	70382417	70382418	chr2:70382418:A:G	rs17428634	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	70743258	70743259	chr2:70743259:C:T	rs11889266	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr2	71605884	71605885	chr2:71605885:A:G	rs7586988	A	G	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	71685781	71685782	chr2:71685782:C:T	rs142721362	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	71766592	71766593	chr2:71766593:C:T	rs13033431	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	71832578	71832579	chr2:71832579:A:G	rs148461272	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	73320484	73320485	chr2:73320485:G:A	rs10172677	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	73488390	73488391	chr2:73488391:G:A	rs79936383	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	74290552	74290553	chr2:74290553:A:G	rs3755439	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	74392203	74392204	chr2:74392204:T:C	rs1039209891	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.74067261241241	2.813768625252347	TTTAATTAGC
chr2	74424185	74424186	chr2:74424186:A:C	rs7607995	A	C	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	74862673	74862674	chr2:74862674:T:G	rs4853065	T	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	75181891	75181892	chr2:75181892:C:G	rs726506	C	G	C	Alx1.mouse_homeodomain_1	9	1	+	8.17105328609015	7.745780429820584	CTTAATTAGC
chr2	75375547	75375548	chr2:75375548:T:G	rs60460340	T	G	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	76366628	76366629	chr2:76366629:C:T	rs996396	C	T	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	76889637	76889638	chr2:76889638:C:T	rs985234	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	76970709	76970710	chr2:76970710:A:G	rs9309511	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	77057430	77057431	chr2:77057431:T:C	rs1446690	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	77147378	77147379	chr2:77147379:G:A	rs187285383	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	78599107	78599108	chr2:78599108:C:A	rs1717554	C	A	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	79005055	79005056	chr2:79005056:C:T	rs13031947	C	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	79088374	79088375	chr2:79088375:T:C	rs2073441	T	C	.	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	79249081	79249082	chr2:79249082:A:G	rs13001365	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	79535878	79535879	chr2:79535879:G:A	rs67690279	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	79783248	79783249	chr2:79783249:T:C	rs994984	T	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr2	81505684	81505685	chr2:81505685:T:C	rs12464265	T	C	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	82464474	82464475	chr2:82464475:G:T	rs6729703	G	T	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr2	83023158	83023159	chr2:83023159:C:A	rs17040796	C	A	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	83023159	83023160	chr2:83023160:G:A	rs62148874	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	84716593	84716594	chr2:84716594:C:A	rs1192345	C	A	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	84716614	84716615	chr2:84716615:T:C	rs75176140	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	85151770	85151771	chr2:85151771:C:A	rs2583539	C	A	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	85342255	85342256	chr2:85342256:C:T	rs15413	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	7.9549935751004215	7.218377972646112	GCTAATTAAC
chr2	85790768	85790769	chr2:85790769:G:A	rs13385658	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	85865129	85865130	chr2:85865130:T:C	rs1533605	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	86037170	86037171	chr2:86037171:T:G	chr2:86037171:T:G	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	86209390	86209391	chr2:86209391:G:A	rs1540391	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr2	86794535	86794536	chr2:86794536:G:A	rs34546581	G	A	A	Alx1.mouse_homeodomain_1	2	1	-	8.01360700198315	8.867637029512398	TCCAATTAAG
chr2	88232949	88232950	chr2:88232950:G:C	rs77497994	G	C	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	88232975	88232976	chr2:88232976:A:G	rs4246600	A	G	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	95894554	95894555	chr2:95894555:T:C	rs4527246	T	C	t	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	96715818	96715819	chr2:96715819:C:T	rs72809824	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	96761574	96761575	chr2:96761575:G:A	chr2:96761575:G:A	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	96940010	96940011	chr2:96940011:A:G	rs7594227	A	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	96963394	96963395	chr2:96963395:T:C	rs79556424	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	97664746	97664747	chr2:97664747:A:T	rs36216560	A	T	a	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	97664760	97664761	chr2:97664761:G:A	rs138178942	G	A	g	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	98618705	98618706	chr2:98618706:T:G	rs17513468	T	G	G	Alx1.mouse_homeodomain_1	6	1	+	9.158781247982416	4.343648855098478	TCTAATTAGC
chr2	98729290	98729291	chr2:98729291:T:C	rs546047711	T	C	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	99928491	99928492	chr2:99928492:T:C	rs6707538	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	99975952	99975953	chr2:99975953:T:C	rs2001722	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.298017703190137	3.310295786921156	CCTAATTAAG
chr2	100044026	100044027	chr2:100044027:G:A	rs1054435965	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	100236804	100236805	chr2:100236805:G:A	rs10496346	G	A	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	101162895	101162896	chr2:101162896:G:A	rs11691031	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	101251853	101251854	chr2:101251854:T:C	rs11887349	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr2	101363359	101363360	chr2:101363360:T:C	rs10166863	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	101451819	101451820	chr2:101451820:G:A	rs7598326	G	A	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	101655040	101655041	chr2:101655041:A:G	rs117467171	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.9549935751004215	2.983313922079679	GCTAATTAAC
chr2	101989360	101989361	chr2:101989361:C:A	rs13018457	C	A	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	102166493	102166494	chr2:102166494:G:A	rs552126795	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	102227185	102227186	chr2:102227186:C:G	rs35122930	C	G	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	102237593	102237594	chr2:102237594:C:T	rs7583215	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	102297753	102297754	chr2:102297754:A:G	rs11690644	A	G	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	102315073	102315074	chr2:102315074:C:T	rs72823632	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	102564404	102564405	chr2:102564405:T:C	rs11681159	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	103527539	103527540	chr2:103527540:T:G	rs1451982	T	G	G	Alx1.mouse_homeodomain_1	7	1	-	7.233317895140026	3.9548720118799263	CCCAATTACC
chr2	104873769	104873770	chr2:104873770:C:T	rs116402848	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	105485960	105485961	chr2:105485961:C:T	rs116362644	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	105583476	105583477	chr2:105583477:A:G	rs6741857	A	G	G	Alx1.mouse_homeodomain_1	5	1	-	8.69757138156076	3.70984946529178	TCCAATTAAA
chr2	105769656	105769657	chr2:105769657:G:A	rs114466993	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	106061992	106061993	chr2:106061993:C:T	rs11124082	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	106309547	106309548	chr2:106309548:G:C	rs4522599	G	C	-	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	107098844	107098845	chr2:107098845:T:A	rs114956521	T	A	T	Alx1.mouse_homeodomain_1	4	1	-	7.852546319205846	2.7777777724679407	CCTAATTAGT
chr2	107222739	107222740	chr2:107222740:A:C	rs78760723	A	C	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	107437719	107437720	chr2:107437720:G:A	rs266181	G	A	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	109285388	109285389	chr2:109285389:C:T	rs148254004	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr2	109487530	109487531	chr2:109487531:A:G	rs36145904	A	G	A	Alx1.mouse_homeodomain_1	1	1	-	8.305181923889696	8.723290559459702	CTTAATTAAC
chr2	111049968	111049969	chr2:111049969:G:C	rs116008367	G	C	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	111061597	111061598	chr2:111061598:G:T	rs35574878	G	T	G	Alx1.mouse_homeodomain_1	8	1	+	7.886642584883163	7.039914290691783	TTCAATTAGC
chr2	111231771	111231772	chr2:111231772:A:C	rs10174361	A	C	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	111533802	111533803	chr2:111533803:G:A	rs1349076	G	A	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	111685146	111685147	chr2:111685147:C:T	rs11692656	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	111884792	111884793	chr2:111884793:A:C	rs6707762	A	C	N	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	111983957	111983958	chr2:111983958:A:G	rs13020304	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	112056467	112056468	chr2:112056468:T:C	rs6713344	T	C	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	112074084	112074085	chr2:112074085:G:A	rs7568022	G	A	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	112078672	112078673	chr2:112078673:G:A	rs189780821	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr2	112279261	112279262	chr2:112279262:G:C	rs13001618	G	C	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	112471210	112471211	chr2:112471211:C:T	rs62157489	C	T	.	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	112852308	112852309	chr2:112852309:T:C	rs6735739	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.438879858252715	5.8320599684040255	TCCAATTAAC
chr2	112996535	112996536	chr2:112996536:T:A	rs56141952	T	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	113102460	113102461	chr2:113102461:G:A	rs7574427	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	113345136	113345137	chr2:113345137:A:G	rs6542128	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	113370606	113370607	chr2:113370607:C:G	rs187715469	C	G	.	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	113819421	113819422	chr2:113819422:C:G	rs62170146	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.087347922669274	6.7751706291737115	CCTAATTACC
chr2	115473498	115473499	chr2:115473499:T:C	rs10496492	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	116819562	116819563	chr2:116819563:G:T	rs17046388	G	T	G	Alx1.mouse_homeodomain_1	9	1	+	7.309859037861343	6.998516291676599	CCCAATTAGG
chr2	117065610	117065611	chr2:117065611:T:G	rs74875172	T	G	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	117763660	117763661	chr2:117763661:A:G	rs34044516	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	117930831	117930832	chr2:117930832:T:A	rs1019589	T	A	T	Alx1.mouse_homeodomain_1	9	1	-	9.551601409090008	8.556294283327654	TCTAATTAAA
chr2	117930841	117930842	chr2:117930842:C:G	rs7561707	C	G	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	118062278	118062279	chr2:118062279:G:T	rs1541714	G	T	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	118080704	118080705	chr2:118080705:A:G	rs2161830	A	G	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	118130828	118130829	chr2:118130829:G:A	rs13409573	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.886642584883163	7.150026982428854	TTCAATTAGC
chr2	118179793	118179794	chr2:118179794:C:A	rs7572165	C	A	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	118431351	118431352	chr2:118431352:A:G	rs13395072	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	118823862	118823863	chr2:118823863:G:A	rs11690226	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	118849785	118849786	chr2:118849786:A:G	rs186585454	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	118894041	118894042	chr2:118894042:G:C	rs10198793	G	C	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	119281068	119281069	chr2:119281069:T:C	rs77920636	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	119782890	119782891	chr2:119782891:A:G	rs12469317	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	120331993	120331994	chr2:120331994:T:A	rs4849864	T	A	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	120442465	120442466	chr2:120442466:G:T	rs932833853	G	T	G	Alx1.mouse_homeodomain_1	0	1	-	8.298017703190137	7.649839169279338	CCTAATTAAG
chr2	120442466	120442467	chr2:120442467:C:T	rs1051232776	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	120577130	120577131	chr2:120577131:C:T	rs7563291	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	120587886	120587887	chr2:120587887:T:G	rs1109426	T	G	G	Alx1.mouse_homeodomain_1	7	1	-	8.563442743761213	5.2849968605011135	TCCAATTAGA
chr2	120797876	120797877	chr2:120797877:C:T	rs13423474	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	121071088	121071089	chr2:121071089:G:C	rs192953220	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.69757138156076	7.3853940880652	TCCAATTAAA
chr2	121075458	121075459	chr2:121075459:T:C	rs971361869	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	121075467	121075468	chr2:121075468:G:C	rs33925064	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.589161921660155	7.276984628164594	CCTAATTAGC
chr2	121517733	121517734	chr2:121517734:C:G	rs76971393	C	G	c	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	121716363	121716364	chr2:121716364:G:A	rs12999360	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	122187149	122187150	chr2:122187150:G:A	rs912538734	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	122385054	122385055	chr2:122385055:A:C	rs13025334	A	C	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	122926587	122926588	chr2:122926588:T:C	rs1518223	T	C	N	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	123212685	123212686	chr2:123212686:G:T	rs13429177	G	T	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	123418080	123418081	chr2:123418081:T:C	rs4848843	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr2	123474572	123474573	chr2:123474573:G:C	rs13413464	G	C	-	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	123731384	123731385	chr2:123731385:A:C	rs11890550	A	C	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	124002196	124002197	chr2:124002197:A:C	rs17269066	A	C	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	124025354	124025355	chr2:124025355:T:C	rs77182849	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr2	124551479	124551480	chr2:124551480:G:A	rs2047876	G	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr2	124551515	124551516	chr2:124551516:G:A	rs10185849	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	125822957	125822958	chr2:125822958:G:A	rs72967650	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.23169439272197	7.886780097521472	TCTAATTACG
chr2	126935832	126935833	chr2:126935833:A:G	rs4663068	A	G	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	127153987	127153988	chr2:127153988:G:A	rs188509500	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	127773007	127773008	chr2:127773008:C:T	rs191596098	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	127829680	127829681	chr2:127829681:C:T	rs75166059	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	128354174	128354175	chr2:128354175:C:T	rs541309425	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	128425131	128425132	chr2:128425132:C:T	rs183144821	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	128487972	128487973	chr2:128487973:A:G	rs705055	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	3.2065887863599385	TTTAATTAAA
chr2	128746976	128746977	chr2:128746977:G:A	rs79837540	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	128796151	128796152	chr2:128796152:G:T	rs61430575	G	T	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	128925824	128925825	chr2:128925825:G:A	rs2253839	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	129263975	129263976	chr2:129263976:A:T	rs74635317	A	T	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	129334595	129334596	chr2:129334596:G:A	rs17049356	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	129439639	129439640	chr2:129439640:T:C	rs75605158	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.298017703190137	2.371113716030073	CCTAATTAAG
chr2	129756933	129756934	chr2:129756934:C:G	rs75905160	C	G	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	130300861	130300862	chr2:130300862:G:A	rs4396762	G	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	130342324	130342325	chr2:130342325:T:C	rs149665931	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	130342350	130342351	chr2:130342351:G:A	rs145463354	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	130806401	130806402	chr2:130806402:A:C	rs788185	A	C	C	Alx1.mouse_homeodomain_1	1	1	-	8.305181923889696	7.411113265964141	CTTAATTAAC
chr2	131661545	131661546	chr2:131661546:A:G	rs1961526	A	G	.	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	133025082	133025083	chr2:133025083:C:G	rs6709471	C	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	133284987	133284988	chr2:133284988:C:T	rs62180003	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.346039445977318	8.91565877229958	CCTAATTACA
chr2	133485994	133485995	chr2:133485995:T:C	rs113900128	T	C	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	133492756	133492757	chr2:133492757:T:C	rs74327451	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	133777834	133777835	chr2:133777835:C:T	rs1446744	C	T	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	133836175	133836176	chr2:133836176:A:G	rs78051227	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	8.874801250211958	8.74067261241241	TTTAATTAAC
chr2	134405973	134405974	chr2:134405974:T:C	rs111515432	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr2	134999680	134999681	chr2:134999681:A:C	chr2:134999681:A:C	A	C	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	135072791	135072792	chr2:135072792:A:G	rs75552841	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.981982082767747	6.084887573431371	CCTAATTAAA
chr2	135897117	135897118	chr2:135897118:C:A	chr2:135897118:C:A	C	A	C	Alx1.mouse_homeodomain_1	8	1	+	8.23885861342153	8.874801250211958	TTTAATTACC
chr2	136138758	136138759	chr2:136138759:A:T	rs78135163	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	136258420	136258421	chr2:136258421:G:A	rs4452212	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	136258897	136258898	chr2:136258898:C:G	rs77394884	C	G	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	136324743	136324744	chr2:136324744:A:C	rs67717162	A	C	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	136350659	136350660	chr2:136350660:G:A	rs111420737	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	137202796	137202797	chr2:137202797:C:T	rs6430687	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	137206525	137206526	chr2:137206526:T:G	rs13388625	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	8.69757138156076	4.567158687630298	TCCAATTAAA
chr2	137608066	137608067	chr2:137608067:A:G	rs7597979	A	G	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	137608097	137608098	chr2:137608098:A:G	rs7597993	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	138085895	138085896	chr2:138085896:T:C	rs749768720	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	138344437	138344438	chr2:138344438:T:C	rs78770686	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	138956333	138956334	chr2:138956334:G:T	rs2376103	G	T	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	139478461	139478462	chr2:139478462:A:G	rs116523613	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	139525336	139525337	chr2:139525337:G:A	rs12467952	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	139893759	139893760	chr2:139893760:G:A	rs6722928	G	A	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	141595869	141595870	chr2:141595870:C:T	rs62166490	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr2	142020658	142020659	chr2:142020659:C:G	rs12998295	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	9.158781247982416	8.656967248991535	TCTAATTAGC
chr2	142036044	142036045	chr2:142036045:T:C	rs74686491	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	142064462	142064463	chr2:142064463:A:C	rs181932680	A	C	A	Alx1.mouse_homeodomain_1	5	1	-	8.69757138156076	2.408592146857801	TCCAATTAAA
chr2	142973581	142973582	chr2:142973582:T:A	rs73961233	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	143110993	143110994	chr2:143110994:C:A	rs827230	C	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	143151829	143151830	chr2:143151830:A:G	rs2600377	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	8.563442743761213	5.666348234424839	TCCAATTAGA
chr2	143151830	143151831	chr2:143151831:A:C	rs2581261	A	C	C	Alx1.mouse_homeodomain_1	5	1	-	8.563442743761213	2.274463509058254	TCCAATTAGA
chr2	143162613	143162614	chr2:143162614:A:G	rs73962354	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	143613464	143613465	chr2:143613465:C:T	rs2969584	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.438879858252715	7.702264255798406	TCCAATTAAC
chr2	144027822	144027823	chr2:144027823:A:T	rs56181240	A	T	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr2	144428429	144428430	chr2:144428430:G:A	rs142542447	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	144466980	144466981	chr2:144466981:G:A	rs776137501	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	144490120	144490121	chr2:144490121:C:T	rs77157413	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	144687089	144687090	chr2:144687090:G:A	rs13391828	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr2	146234249	146234250	chr2:146234250:C:T	rs2216930	C	T	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	146315798	146315799	chr2:146315799:T:C	rs74368883	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	147374378	147374379	chr2:147374379:T:C	rs16827260	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	147443046	147443047	chr2:147443047:T:C	rs72863554	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	147483031	147483032	chr2:147483032:T:C	rs1181913062	T	C	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	148566400	148566401	chr2:148566401:A:G	rs4972374	A	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	149513083	149513084	chr2:149513084:C:T	rs79349911	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	149721066	149721067	chr2:149721067:T:G	rs848251	T	G	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	150518584	150518585	chr2:150518585:G:A	rs16828295	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	150980448	150980449	chr2:150980449:C:G	rs6433101	C	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	151171412	151171413	chr2:151171413:C:T	rs6712124	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	151302989	151302990	chr2:151302990:G:A	rs6723298	G	A	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	152306320	152306321	chr2:152306321:T:C	rs5005667	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	152432733	152432734	chr2:152432734:T:G	rs73002245	T	G	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	152586729	152586730	chr2:152586730:T:C	rs73008193	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	152716560	152716561	chr2:152716561:T:C	rs10497112	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.438879858252715	7.869260531930455	TCCAATTAAC
chr2	153368217	153368218	chr2:153368218:G:A	rs13032435	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	153368245	153368246	chr2:153368246:A:G	rs146527736	A	G	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	153645104	153645105	chr2:153645105:A:C	rs13015333	A	C	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	153891184	153891185	chr2:153891185:T:C	rs16834771	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	9.551601409090008	8.867637029512398	TCTAATTAAA
chr2	154482195	154482196	chr2:154482196:G:A	rs6745664	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	8.312052953791037	7.575437351336728	TCTAATTATC
chr2	154491533	154491534	chr2:154491534:A:G	rs13021644	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.867637029512398	3.8959573764916557	TCTAATTAAG
chr2	155282090	155282091	chr2:155282091:T:C	rs905354529	T	C	.	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr2	155369169	155369170	chr2:155369170:A:C	rs1170312634	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	155526889	155526890	chr2:155526890:A:G	rs1524910	A	G	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	156207804	156207805	chr2:156207805:T:A	rs1519799	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr2	156310259	156310260	chr2:156310260:C:T	rs16840214	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	156589237	156589238	chr2:156589238:G:A	rs1368248	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	156651319	156651320	chr2:156651320:C:T	rs114761677	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	157264121	157264122	chr2:157264122:T:C	rs7598086	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	158039033	158039034	chr2:158039034:T:C	rs4664238	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	158131496	158131497	chr2:158131497:T:C	rs6756966	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	158537543	158537544	chr2:158537544:A:G	rs13027548	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	158537551	158537552	chr2:158537552:C:G	rs11677190	C	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	158846018	158846019	chr2:158846019:T:G	rs145835089	T	G	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	159053253	159053254	chr2:159053254:C:T	rs190797166	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	159154017	159154018	chr2:159154018:G:A	rs80249730	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr2	159426271	159426272	chr2:159426272:A:G	rs3755436	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr2	159618425	159618426	chr2:159618426:C:T	rs1425044	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr2	160006159	160006160	chr2:160006160:T:C	rs114850881	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.346039445977318	2.4191354588172542	CCTAATTACA
chr2	160317548	160317549	chr2:160317549:A:C	rs79337179	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.346039445977318	4.215626752046856	CCTAATTACA
chr2	161031185	161031186	chr2:161031186:G:T	rs72874211	G	T	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	161279145	161279146	chr2:161279146:A:T	rs796572486	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	8.981982082767747	3.5580002855513917	CCTAATTAAA
chr2	162582762	162582763	chr2:162582763:T:A	rs11888977	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	162841143	162841144	chr2:162841144:A:C	rs16847472	A	C	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	163121172	163121173	chr2:163121173:A:C	rs10169365	A	C	C	Alx1.mouse_homeodomain_1	1	1	-	8.23885861342153	7.344789955495973	TTTAATTACC
chr2	164073871	164073872	chr2:164073872:A:T	rs10930115	A	T	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	164452015	164452016	chr2:164452016:C:T	rs76787630	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	164706785	164706786	chr2:164706786:T:C	rs953865803	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	165239217	165239218	chr2:165239218:A:G	rs6718960	A	G	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr2	165815942	165815943	chr2:165815943:T:C	rs181860237	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	165918626	165918627	chr2:165918627:A:C	rs62177812	A	C	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	167110157	167110158	chr2:167110158:G:C	rs2390513	G	C	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	167989725	167989726	chr2:167989726:T:C	rs735893	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	168002241	168002242	chr2:168002242:C:T	rs76890651	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	168186412	168186413	chr2:168186413:C:T	rs2063959	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	168233687	168233688	chr2:168233688:C:T	rs10181180	C	T	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	168693722	168693723	chr2:168693723:G:A	rs62174421	G	A	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	169463640	169463641	chr2:169463641:C:A	rs10170533	C	A	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	169755735	169755736	chr2:169755736:A:G	rs35524975	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.8478534449682	8.16388906539059	CCTAATTAGA
chr2	169962247	169962248	chr2:169962248:T:A	rs72874431	T	A	-	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	170201641	170201642	chr2:170201642:T:C	rs11902801	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.312052953791037	3.3243310375220547	TCTAATTATC
chr2	171531309	171531310	chr2:171531310:A:G	rs6730441	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	171555133	171555134	chr2:171555134:C:T	rs1060248	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	171807680	171807681	chr2:171807681:G:A	rs34221876	G	A	g	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	171816942	171816943	chr2:171816943:G:A	rs6716901	G	A	g	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	171858890	171858891	chr2:171858891:T:C	rs1105265	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	172336559	172336560	chr2:172336560:A:G	rs67153018	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	172434267	172434268	chr2:172434268:T:C	rs10184567	T	C	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	172516355	172516356	chr2:172516356:C:G	rs79346771	C	G	G	Alx1.mouse_homeodomain_1	9	1	+	8.874801250211958	8.449528393942392	TTTAATTAAC
chr2	172516361	172516362	chr2:172516362:T:C	rs111613452	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	172516366	172516367	chr2:172516367:A:T	rs79594061	A	T	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	173188490	173188491	chr2:173188491:A:G	rs3754741	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	173288280	173288281	chr2:173288281:C:T	rs11884211	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	173300096	173300097	chr2:173300097:G:T	rs6740975	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	173300097	173300098	chr2:173300098:C:T	rs6433400	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	173573233	173573234	chr2:173573234:C:T	rs12619702	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	173750463	173750464	chr2:173750464:A:G	rs56350776	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	8.061628744770331	5.1645342354339565	TCCAATTACA
chr2	174197288	174197289	chr2:174197289:G:A	rs10191904	G	A	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	174750303	174750304	chr2:174750304:C:T	rs11904606	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	174842000	174842001	chr2:174842001:C:T	rs1350126	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	175282661	175282662	chr2:175282662:A:T	rs77023162	A	T	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	175364193	175364194	chr2:175364194:A:T	rs6757657	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	175397105	175397106	chr2:175397106:G:A	rs4566335	G	A	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	175459868	175459869	chr2:175459869:G:A	rs111734434	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	176089382	176089383	chr2:176089383:A:G	rs847201	A	G	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	176111728	176111729	chr2:176111729:G:A	rs818629	G	A	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	176390878	176390879	chr2:176390879:G:A	rs2037382	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr2	176565575	176565576	chr2:176565576:C:G	rs11888733	C	G	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	176765879	176765880	chr2:176765880:T:G	rs6758766	T	G	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	176998851	176998852	chr2:176998852:G:A	rs6433630	G	A	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	179058942	179058943	chr2:179058943:T:A	rs969651810	T	A	T	Alx1.mouse_homeodomain_1	3	1	-	9.292909885781963	5.565428612090355	TCTAATTAAC
chr2	179058957	179058958	chr2:179058958:C:T	rs6709090	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	179412007	179412008	chr2:179412008:C:A	rs114831388	C	A	C	Alx1.mouse_homeodomain_1	8	1	+	8.23885861342153	8.874801250211958	TTTAATTACC
chr2	180012658	180012659	chr2:180012659:A:G	rs262265	A	G	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	180046690	180046691	chr2:180046691:T:A	rs6708640	T	A	.	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	180144147	180144148	chr2:180144148:A:T	rs11884036	A	T	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	181106509	181106510	chr2:181106510:A:G	rs6433892	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.346039445977318	5.448944936640942	CCTAATTACA
chr2	181122825	181122826	chr2:181122826:G:A	rs13020845	G	A	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	181194654	181194655	chr2:181194655:A:G	rs4439920	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	181791466	181791467	chr2:181791467:T:C	rs139914619	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	181791955	181791956	chr2:181791956:T:C	rs13404156	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	181854073	181854074	chr2:181854074:C:G	rs1863687	C	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	182381346	182381347	chr2:182381347:C:T	rs11676337	C	T	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	182423526	182423527	chr2:182423527:G:A	rs1367202	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	183227385	183227386	chr2:183227386:T:C	rs17707596	T	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	183285354	183285355	chr2:183285355:T:A	rs75579049	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	184118511	184118512	chr2:184118512:C:A	rs13424122	C	A	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	187327584	187327585	chr2:187327585:T:A	rs7567485	T	A	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	187347695	187347696	chr2:187347696:A:C	rs72900687	A	C	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	187448789	187448790	chr2:187448790:C:G	rs111638822	C	G	c	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	187459124	187459125	chr2:187459125:T:G	rs13424790	T	G	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	187528212	187528213	chr2:187528213:G:A	rs4667168	G	A	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	187904400	187904401	chr2:187904401:C:T	chr2:187904401:C:T	C	T	c	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	188085890	188085891	chr2:188085891:T:C	rs78448563	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	188293892	188293893	chr2:188293893:C:T	rs12693491	C	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	188425202	188425203	chr2:188425203:A:T	rs6756220	A	T	T	Alx1.mouse_homeodomain_1	0	1	-	8.312052953791037	7.094255093557976	TCTAATTATC
chr2	188737658	188737659	chr2:188737659:A:G	rs4667243	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	188883896	188883897	chr2:188883897:T:C	rs6710225	T	C	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	189296056	189296057	chr2:189296057:A:T	rs72912280	A	T	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	189567740	189567741	chr2:189567741:T:C	rs994227	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	189934556	189934557	chr2:189934557:A:G	rs549384512	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	190122959	190122960	chr2:190122960:C:T	rs115012747	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	190181242	190181243	chr2:190181243:G:T	rs6720084	G	T	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	190181246	190181247	chr2:190181247:T:C	rs75672169	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	190188992	190188993	chr2:190188993:T:C	rs16832405	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.346039445977318	7.49200941844807	CCTAATTACA
chr2	190812852	190812853	chr2:190812853:C:T	rs58303706	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	190894041	190894042	chr2:190894042:T:C	rs11691127	T	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr2	191081876	191081877	chr2:191081877:T:A	rs13010752	T	A	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	191111875	191111876	chr2:191111876:A:G	rs4853542	A	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr2	191111907	191111908	chr2:191111908:A:G	rs4853543	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	191334255	191334256	chr2:191334256:G:A	rs540639424	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	191352575	191352576	chr2:191352576:G:A	rs3736500	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	191385816	191385817	chr2:191385817:A:G	rs13000398	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.346039445977318	3.358317529708337	CCTAATTACA
chr2	191385841	191385842	chr2:191385842:T:C	rs13026888	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	191555320	191555321	chr2:191555321:G:C	rs6708462	G	C	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	191622976	191622977	chr2:191622977:G:A	rs113806062	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	191878721	191878722	chr2:191878722:A:G	rs141497674	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	195592756	195592757	chr2:195592757:A:G	rs16837588	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr2	195601057	195601058	chr2:195601058:C:T	rs146457284	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	195687974	195687975	chr2:195687975:A:G	rs76986601	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	195899058	195899059	chr2:195899059:G:A	rs17361373	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	196219862	196219863	chr2:196219863:T:C	rs1531113	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr2	196219870	196219871	chr2:196219871:T:C	rs1531114	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	8.087347922669274	3.115668269648532	CCTAATTACC
chr2	196324456	196324457	chr2:196324457:T:C	rs6738820	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	196714348	196714349	chr2:196714349:A:T	rs6434882	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	8.74067261241241	5.5088956650831475	TTTAATTAGC
chr2	197237698	197237699	chr2:197237699:C:T	rs6749611	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	197898154	197898155	chr2:197898155:T:C	rs1435568	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	198075811	198075812	chr2:198075812:A:T	rs140383330	A	T	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr2	198115245	198115246	chr2:198115246:G:T	rs73063028	G	T	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	198214676	198214677	chr2:198214677:G:A	rs12616750	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	198297247	198297248	chr2:198297248:T:C	rs13423739	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.869260531930455	2.8975808789097135	CCCAATTAAC
chr2	198717854	198717855	chr2:198717855:G:A	rs4675232	G	A	-	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	198965769	198965770	chr2:198965770:T:C	rs1159772	T	C	t	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	199125383	199125384	chr2:199125384:A:G	rs1451488	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	199161139	199161140	chr2:199161140:A:T	rs6743084	A	T	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	199739557	199739558	chr2:199739558:A:G	rs6435033	A	G	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	199868596	199868597	chr2:199868597:C:G	rs62178324	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	200308500	200308501	chr2:200308501:A:G	rs62179507	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	9.417472771290461	8.733508391712851	TCTAATTAGA
chr2	200625112	200625113	chr2:200625113:C:T	rs6720189	C	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr2	201153211	201153212	chr2:201153212:G:A	rs113862538	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	201406619	201406620	chr2:201406620:C:T	rs11684481	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	201406623	201406624	chr2:201406624:C:T	rs2540334	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	201406655	201406656	chr2:201406656:A:T	rs548697529	A	T	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	202032795	202032796	chr2:202032796:T:A	rs13020497	T	A	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	202051674	202051675	chr2:202051675:T:G	rs12470375	T	G	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	202115734	202115735	chr2:202115735:T:G	rs72938548	T	G	t	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	202237483	202237484	chr2:202237484:T:C	rs150045648	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	9.551601409090008	9.417472771290461	TCTAATTAAA
chr2	202493869	202493870	chr2:202493870:A:G	rs75096774	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	203164429	203164430	chr2:203164430:T:C	rs62182214	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.49200941844807	2.5203297654273293	CCCAATTACA
chr2	203242301	203242302	chr2:203242302:G:A	rs4675324	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr2	203534611	203534612	chr2:203534612:T:G	rs2469961	T	G	g	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr2	203567880	203567881	chr2:203567881:T:C	rs6730171	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	203585926	203585927	chr2:203585927:A:G	rs144355804	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	204001078	204001079	chr2:204001079:A:G	rs13425717	A	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	204335541	204335542	chr2:204335542:C:T	rs6745128	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	204890960	204890961	chr2:204890961:C:T	rs16836720	C	T	c	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	204971245	204971246	chr2:204971246:T:C	rs72940491	T	C	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	204982687	204982688	chr2:204982688:G:T	rs1510777	G	T	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	205025473	205025474	chr2:205025474:G:A	rs115180506	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	205141859	205141860	chr2:205141860:G:A	rs76187387	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	8.17105328609015	8.305181923889696	CTTAATTAGC
chr2	205192924	205192925	chr2:205192925:T:C	rs10932098	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	205213901	205213902	chr2:205213902:A:T	rs7592913	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	7.879478364183603	2.4554965669672484	TCCAATTAGG
chr2	205495990	205495991	chr2:205495991:G:C	rs11677016	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	205836743	205836744	chr2:205836744:G:T	rs6435304	G	T	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	205855593	205855594	chr2:205855594:T:C	rs13017212	T	C	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	206176328	206176329	chr2:206176329:T:C	rs3732083	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.852546319205846	2.8808666661851037	CCTAATTAGT
chr2	206176347	206176348	chr2:206176348:G:A	rs1234441605	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	206887169	206887170	chr2:206887170:A:G	rs1530941	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	206940390	206940391	chr2:206940391:G:T	rs56241887	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	207222414	207222415	chr2:207222415:C:T	rs741475	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr2	207288861	207288862	chr2:207288862:G:A	rs75098763	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	207288867	207288868	chr2:207288868:G:A	rs79393036	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	207363631	207363632	chr2:207363632:C:A	rs72951688	C	A	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	207473180	207473181	chr2:207473181:T:A	chr2:207473181:T:A	T	A	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	207473270	207473271	chr2:207473271:C:T	rs117461090	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	207473292	207473293	chr2:207473293:A:G	rs144112669	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	207840366	207840367	chr2:207840367:C:A	rs7574706	C	A	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	208026936	208026937	chr2:208026937:C:T	rs1466186	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	208046131	208046132	chr2:208046132:G:A	rs17598650	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	210443673	210443674	chr2:210443674:T:C	rs115110199	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr2	210900584	210900585	chr2:210900585:C:G	rs4520972	C	G	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr2	211033747	211033748	chr2:211033748:T:G	rs56371952	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	8.91565877229958	4.785246078369116	TCTAATTACA
chr2	211391466	211391467	chr2:211391467:C:T	rs6749560	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	211742197	211742198	chr2:211742198:T:C	rs75404170	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	212645396	212645397	chr2:212645397:G:C	rs72949040	G	C	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	213293073	213293074	chr2:213293074:G:T	rs1488984	G	T	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	214519526	214519527	chr2:214519527:A:G	rs4673851	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	214537065	214537066	chr2:214537066:A:C	rs78121988	A	C	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	214772780	214772781	chr2:214772781:G:A	rs3768713	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	214899900	214899901	chr2:214899901:A:G	rs114139606	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	215351614	215351615	chr2:215351615:A:G	rs12477163	A	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr2	216235632	216235633	chr2:216235633:C:T	rs147750894	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	216596529	216596530	chr2:216596530:G:A	rs937954288	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	216708887	216708888	chr2:216708888:G:A	rs12469643	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr2	216762308	216762309	chr2:216762309:A:T	rs12616811	A	T	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	216849549	216849550	chr2:216849550:T:G	rs56142049	T	G	t	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr2	218445757	218445758	chr2:218445758:T:C	rs79358712	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	218445759	218445760	chr2:218445760:A:C	rs4674308	A	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	218741328	218741329	chr2:218741329:C:T	rs755112	C	T	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	219082461	219082462	chr2:219082462:A:G	rs7559667	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	219691575	219691576	chr2:219691576:G:A	rs11686314	G	A	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	219969412	219969413	chr2:219969413:T:C	rs33967840	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr2	220188518	220188519	chr2:220188519:A:C	rs10174847	A	C	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	220240914	220240915	chr2:220240915:A:G	rs67452704	A	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	220679150	220679151	chr2:220679151:G:A	rs6436217	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr2	220922139	220922140	chr2:220922140:A:C	rs749635	A	C	C	Alx1.mouse_homeodomain_1	3	1	+	7.735131894130908	3.6047192002004453	CCCAATTAGC
chr2	221501734	221501735	chr2:221501735:G:A	rs62180589	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	221501770	221501771	chr2:221501771:C:T	rs149612976	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	223225842	223225843	chr2:223225843:G:T	rs34502862	G	T	T	Alx1.mouse_homeodomain_1	8	1	+	8.589161921660155	7.742433627468776	CCTAATTAGC
chr2	223312395	223312396	chr2:223312396:C:T	rs7585315	C	T	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	224100440	224100441	chr2:224100441:A:G	rs1453664	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	224133556	224133557	chr2:224133557:C:T	rs10169530	C	T	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	224575126	224575127	chr2:224575127:A:G	rs16866061	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	225764367	225764368	chr2:225764368:T:C	rs7558381	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr2	226185797	226185798	chr2:226185798:C:G	rs144417520	C	G	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr2	226216165	226216166	chr2:226216166:A:C	rs542774817	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	226367467	226367468	chr2:226367468:G:A	rs12471184	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr2	226514910	226514911	chr2:226514911:G:A	rs115120535	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	226637501	226637502	chr2:226637502:A:G	rs12694703	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	226699308	226699309	chr2:226699309:G:T	rs1922531	G	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr2	226738787	226738788	chr2:226738788:C:T	rs150851249	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr2	226888195	226888196	chr2:226888196:T:A	rs59170839	T	A	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	227507075	227507076	chr2:227507076:A:G	rs4075127	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr2	228380233	228380234	chr2:228380234:C:T	rs1234192	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	228875262	228875263	chr2:228875263:C:G	rs187195025	C	G	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	229463595	229463596	chr2:229463596:C:T	rs35834872	C	T	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	229463619	229463620	chr2:229463620:T:C	rs34433763	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr2	230067706	230067707	chr2:230067707:A:G	rs141380936	A	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	230205085	230205086	chr2:230205086:T:A	chr2:230205086:T:A	T	A	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr2	230552289	230552290	chr2:230552290:C:T	rs72987879	C	T	.	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	230860692	230860693	chr2:230860693:A:C	rs2438304	A	C	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	231324408	231324409	chr2:231324409:G:C	rs62197356	G	C	-	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	231426387	231426388	chr2:231426388:G:A	rs142306488	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	231446599	231446600	chr2:231446600:T:A	rs35875739	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	232014263	232014264	chr2:232014264:G:A	rs80303482	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	232030622	232030623	chr2:232030623:G:A	rs11902551	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr2	232452104	232452105	chr2:232452105:C:T	rs148203156	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	8.298017703190137	8.981982082767747	CCTAATTAAG
chr2	232452124	232452125	chr2:232452125:T:C	rs112777413	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	232696630	232696631	chr2:232696631:T:G	chr2:232696631:T:G	T	G	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr2	232854166	232854167	chr2:232854167:T:C	rs2044450	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	232854193	232854194	chr2:232854194:A:G	chr2:232854194:A:G	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr2	233022921	233022922	chr2:233022922:G:C	rs4973594	G	C	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	233050815	233050816	chr2:233050816:A:C	rs35487055	A	C	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	233050824	233050825	chr2:233050825:C:T	rs9917354	C	T	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	233460174	233460175	chr2:233460175:T:C	rs2290464	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	7.49200941844807	4.88518952859938	CCCAATTACA
chr2	233521211	233521212	chr2:233521212:C:T	rs181734030	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	234424086	234424087	chr2:234424087:G:T	rs1472931	G	T	g	Alx1.mouse_homeodomain_1	1	1	-	7.879478364183603	6.28616643801582	TCCAATTAGG
chr2	234581576	234581577	chr2:234581577:G:A	rs188460825	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	234583854	234583855	chr2:234583855:T:G	rs950834	T	G	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	234604556	234604557	chr2:234604557:A:G	rs76346222	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	234604573	234604574	chr2:234604574:A:C	rs6730346	A	C	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	234604598	234604599	chr2:234604599:A:G	rs72981687	A	G	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	234609675	234609676	chr2:234609676:C:T	rs2386506	C	T	-	Alx1.mouse_homeodomain_1	8	1	+	8.346039445977318	8.00112515077682	CCTAATTACA
chr2	234686153	234686154	chr2:234686154:T:A	rs4663471	T	A	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	234686197	234686198	chr2:234686198:G:A	rs4663472	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr2	234970675	234970676	chr2:234970676:C:T	rs11684191	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	234970678	234970679	chr2:234970679:C:T	rs78257183	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr2	234970679	234970680	chr2:234970680:G:C	rs11695168	G	C	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr2	235106890	235106891	chr2:235106891:C:T	rs4233619	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	235146444	235146445	chr2:235146445:A:G	rs7599082	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	235171764	235171765	chr2:235171765:T:C	rs6741321	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr2	235420035	235420036	chr2:235420036:G:A	rs12986427	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	235458894	235458895	chr2:235458895:T:C	rs1517005	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	235611603	235611604	chr2:235611604:A:G	rs4378750	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	235763461	235763462	chr2:235763462:T:C	rs2696405	T	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr2	235860814	235860815	chr2:235860815:G:A	rs6760708	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.886642584883163	8.020771222682711	TTCAATTAGC
chr2	236169249	236169250	chr2:236169250:T:C	rs10183276	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	236171182	236171183	chr2:236171183:G:T	rs66656574	G	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	236237346	236237347	chr2:236237347:G:C	rs182482787	G	C	-	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	236601028	236601029	chr2:236601029:C:T	rs754672360	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	236639596	236639597	chr2:236639597:T:C	rs55848655	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr2	236659811	236659812	chr2:236659812:T:G	chr2:236659812:T:G	T	G	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr2	236674823	236674824	chr2:236674824:G:A	rs62184409	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	236674833	236674834	chr2:236674834:C:A	rs11695375	C	A	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	236769719	236769720	chr2:236769720:T:G	rs77637200	T	G	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	237036259	237036260	chr2:237036260:C:T	rs13383408	C	T	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	237206268	237206269	chr2:237206269:C:G	rs113330034	C	G	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr2	237291151	237291152	chr2:237291152:T:C	rs144825236	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	237304968	237304969	chr2:237304969:C:T	rs190413659	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	237316665	237316666	chr2:237316666:T:C	rs10168891	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	237316687	237316688	chr2:237316688:A:T	rs10166408	A	T	T	Alx1.mouse_homeodomain_1	4	1	+	8.305181923889696	3.230413377151792	CTTAATTAAC
chr2	237391214	237391215	chr2:237391215:C:T	rs73093784	C	T	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr2	237409178	237409179	chr2:237409179:A:C	rs2645782	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	237652907	237652908	chr2:237652908:G:T	rs4663775	G	T	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr2	237706066	237706067	chr2:237706067:T:C	rs57230961	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.346039445977318	7.49200941844807	CCTAATTACA
chr2	237773574	237773575	chr2:237773575:T:C	rs116136795	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.74067261241241	3.768992959391669	TTTAATTAGC
chr2	238250906	238250907	chr2:238250907:G:A	rs13408069	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr2	238459389	238459390	chr2:238459390:C:T	rs542972	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	238774538	238774539	chr2:238774539:G:T	rs9283460	G	T	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	238856325	238856326	chr2:238856326:T:C	rs36196211	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	9.551601409090008	8.69757138156076	TCTAATTAAA
chr2	238998847	238998848	chr2:238998848:C:T	rs4852116	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	239122130	239122131	chr2:239122131:C:T	rs13396070	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	8.23169439272197	8.91565877229958	TCTAATTACG
chr2	239466266	239466267	chr2:239466267:A:C	rs528547481	A	C	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr2	239692724	239692725	chr2:239692725:G:A	rs142654754	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	240130822	240130823	chr2:240130823:A:G	rs1866646	A	G	a	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr2	240278044	240278045	chr2:240278045:C:T	rs6744429	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	240286461	240286462	chr2:240286462:A:G	rs7609232	A	G	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	240292612	240292613	chr2:240292613:C:T	rs59498902	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	240938179	240938180	chr2:240938180:C:T	rs6753109	C	T	c	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	240938180	240938181	chr2:240938181:G:A	rs58294711	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	241248584	241248585	chr2:241248585:C:T	rs10933542	C	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	241248616	241248617	chr2:241248617:T:C	rs62186367	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr2	241257679	241257680	chr2:241257680:C:T	rs4675973	C	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	241257691	241257692	chr2:241257692:C:G	rs62186372	C	G	C	Alx1.mouse_homeodomain_1	9	1	+	7.869260531930455	7.44398767566089	CCCAATTAAC
chr2	241317396	241317397	chr2:241317397:G:C	rs12233133	G	C	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr20	848540	848541	chr20:848541:G:A	rs7266588	G	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr20	953669	953670	chr20:953670:G:A	rs6140734	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	967748	967749	chr20:967749:C:T	rs369154936	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr20	1669165	1669166	chr20:1669166:G:A	rs149236468	G	A	-	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	1790993	1790994	chr20:1790994:G:A	rs6044675	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	2101383	2101384	chr20:2101384:A:T	rs6136990	A	T	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	2108778	2108779	chr20:2108779:G:T	rs188965426	G	T	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	2319370	2319371	chr20:2319371:G:A	rs214818	G	A	a	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	2688109	2688110	chr20:2688110:G:T	rs78367681	G	T	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr20	2688114	2688115	chr20:2688115:T:C	rs113258930	T	C	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr20	2688116	2688117	chr20:2688117:T:G	rs16988041	T	G	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr20	3102645	3102646	chr20:3102646:A:G	rs75128280	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	7.846603954486855	7.276984628164594	TGTAATTAGC
chr20	3106386	3106387	chr20:3106387:C:T	rs2422844	C	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	3401140	3401141	chr20:3401141:T:C	rs557145070	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	3483652	3483653	chr20:3483653:G:A	rs151558	G	A	a	Alx1.mouse_homeodomain_1	8	1	+	7.735131894130908	7.869260531930455	CCCAATTAGC
chr20	3622493	3622494	chr20:3622494:A:G	rs2753980	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	3808968	3808969	chr20:3808969:C:T	rs550724192	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	3888409	3888410	chr20:3888410:A:G	rs67724338	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr20	3935846	3935847	chr20:3935847:T:C	rs181806262	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.69757138156076	8.01360700198315	TCCAATTAAA
chr20	4049839	4049840	chr20:4049840:G:A	rs11908553	G	A	a	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	4053833	4053834	chr20:4053834:T:A	rs34904346	T	A	t	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr20	4367770	4367771	chr20:4367771:T:C	rs17316050	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.589161921660155	5.9823420318114655	CCTAATTAGC
chr20	4367792	4367793	chr20:4367793:T:C	rs159786	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	4470434	4470435	chr20:4470435:C:T	rs76114410	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	4846756	4846757	chr20:4846757:T:G	rs73064408	T	G	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	5088688	5088689	chr20:5088689:A:T	rs4518035	A	T	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr20	5221364	5221365	chr20:5221365:G:T	rs34952756	G	T	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr20	5298551	5298552	chr20:5298552:A:G	rs927101	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.656967248991535	6.0501473591428425	TCTAATTACC
chr20	5299218	5299219	chr20:5299219:A:G	rs140014838	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr20	5299256	5299257	chr20:5299257:T:C	rs6053271	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	5351947	5351948	chr20:5351948:T:G	rs114471936	T	G	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	5393605	5393606	chr20:5393606:A:G	rs6076827	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	5401604	5401605	chr20:5401605:G:C	rs73893967	G	C	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr20	5410638	5410639	chr20:5410639:A:T	rs1980585	A	T	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr20	5675857	5675858	chr20:5675858:A:T	rs6053597	A	T	-	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	5750030	5750031	chr20:5750031:A:T	rs6085267	A	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	5810419	5810420	chr20:5810420:C:T	rs6133267	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr20	5846409	5846410	chr20:5846410:A:G	rs369153956	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	5846414	5846415	chr20:5846415:G:A	rs6053740	G	A	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr20	5846417	5846418	chr20:5846418:T:A	chr20:5846418:T:A	T	A	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	6940745	6940746	chr20:6940746:A:G	rs6085743	A	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr20	8073961	8073962	chr20:8073962:A:T	rs6140525	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	9.417472771290461	5.689991497598853	TCTAATTAGA
chr20	8148843	8148844	chr20:8148844:C:A	rs8121126	C	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	8581497	8581498	chr20:8581498:T:C	rs1203772122	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr20	8751753	8751754	chr20:8751754:T:C	rs6056062	T	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr20	8751777	8751778	chr20:8751778:A:G	rs77812802	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.01360700198315	3.0258850857141697	TCCAATTAAG
chr20	9129849	9129850	chr20:9129850:G:A	rs539571329	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	9503150	9503151	chr20:9503151:T:C	rs6077556	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	9632997	9632998	chr20:9632998:G:A	rs6056767	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr20	10291843	10291844	chr20:10291844:G:A	rs362592	G	A	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	10506999	10507000	chr20:10507000:A:G	rs659785	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr20	10541524	10541525	chr20:10541525:A:G	rs73243722	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr20	10552360	10552361	chr20:10552361:A:C	chr20:10552361:A:C	A	C	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	10569895	10569896	chr20:10569896:C:T	rs76608422	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr20	10659274	10659275	chr20:10659275:A:G	rs3790159	A	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr20	10916453	10916454	chr20:10916454:A:T	rs6077953	A	T	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	10924915	10924916	chr20:10924916:G:C	rs552512353	G	C	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr20	10995192	10995193	chr20:10995193:T:C	rs6108793	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr20	11111593	11111594	chr20:11111594:T:C	rs12624835	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.563873447197741	7.879909067620131	CTTAATTAAA
chr20	11162335	11162336	chr20:11162336:A:C	rs11905173	A	C	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr20	11655392	11655393	chr20:11655393:C:A	rs6078280	C	A	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	11684934	11684935	chr20:11684935:A:C	rs1398846	A	C	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr20	11684961	11684962	chr20:11684962:G:C	rs1398847	G	C	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	11873729	11873730	chr20:11873730:A:G	rs2144352	A	G	G	Alx1.mouse_homeodomain_1	1	1	-	8.305181923889696	8.723290559459702	CTTAATTAAC
chr20	11896047	11896048	chr20:11896048:A:G	rs1237445	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	11907831	11907832	chr20:11907832:T:C	rs1232480	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr20	12837902	12837903	chr20:12837903:C:G	rs2423697	C	G	G	Alx1.mouse_homeodomain_1	1	1	+	7.802937221462287	6.490759927966726	TCCAATTACC
chr20	12988448	12988449	chr20:12988449:T:C	rs752732026	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	13042053	13042054	chr20:13042054:A:G	rs6041800	A	G	g	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	13202608	13202609	chr20:13202609:A:G	rs6041954	A	G	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr20	13212289	13212290	chr20:13212290:G:A	chr20:13212290:G:A	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	13253050	13253051	chr20:13253051:G:A	rs73261070	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.867637029512398	8.449528393942392	TCTAATTAAG
chr20	14294404	14294405	chr20:14294405:G:A	rs138541607	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	14825930	14825931	chr20:14825931:A:G	rs6042940	A	G	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	14956605	14956606	chr20:14956606:G:T	rs117057989	G	T	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	15836835	15836836	chr20:15836836:T:C	rs61003366	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr20	16052539	16052540	chr20:16052540:C:T	rs1225891	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr20	16284167	16284168	chr20:16284168:G:C	rs6080202	G	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr20	16296021	16296022	chr20:16296022:A:G	rs6514671	A	G	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr20	16395648	16395649	chr20:16395649:T:C	rs56368069	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr20	17966679	17966680	chr20:17966680:C:T	rs77450528	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	18000409	18000410	chr20:18000410:G:C	rs12480848	G	C	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	18035030	18035031	chr20:18035031:C:T	rs79973349	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	18537949	18537950	chr20:18537950:T:C	rs948702322	T	C	-	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr20	18628703	18628704	chr20:18628704:C:T	rs2295572	C	T	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr20	18762263	18762264	chr20:18762264:C:T	rs1884790	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	19275949	19275950	chr20:19275950:C:A	rs186459924	C	A	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	19383053	19383054	chr20:19383054:C:T	rs2295072	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr20	19547869	19547870	chr20:19547870:G:A	rs3790256	G	A	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr20	19685177	19685178	chr20:19685178:G:A	rs76270899	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr20	20233185	20233186	chr20:20233186:G:C	rs6515091	G	C	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr20	22288801	22288802	chr20:22288802:A:C	rs200371	A	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr20	22415311	22415312	chr20:22415312:A:G	rs80320398	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	23128497	23128498	chr20:23128498:C:A	rs117530969	C	A	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	23323538	23323539	chr20:23323539:C:T	rs2405229	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	23348384	23348385	chr20:23348385:C:T	rs6036388	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr20	23441841	23441842	chr20:23441842:C:T	rs6114086	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	24007234	24007235	chr20:24007235:T:C	rs6114405	T	C	t	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr20	24007235	24007236	chr20:24007236:G:A	rs117108891	G	A	g	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr20	24116707	24116708	chr20:24116708:G:A	rs34096340	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr20	24235676	24235677	chr20:24235677:A:G	rs2644845	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	7.735131894130908	1.8082279069708438	CCCAATTAGC
chr20	24377929	24377930	chr20:24377930:G:A	rs8114021	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	24447176	24447177	chr20:24447177:C:T	rs6049698	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	24771589	24771590	chr20:24771590:A:C	rs6132764	A	C	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	24936775	24936776	chr20:24936776:T:C	rs6036988	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr20	24950948	24950949	chr20:24950949:T:G	rs55849863	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	25009160	25009161	chr20:25009161:G:A	rs57913893	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr20	25126014	25126015	chr20:25126015:G:A	rs140423376	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr20	25252928	25252929	chr20:25252929:C:T	rs375990306	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	29331190	29331191	chr20:29331191:C:T	rs878984870	C	T	.	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr20	31072419	31072420	chr20:31072420:T:G	rs1483208298	T	G	.	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	31072421	31072422	chr20:31072422:T:C	rs914780463	T	C	.	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	31963362	31963363	chr20:31963363:C:T	rs138392498	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.147095123247572	CCCAATTACA
chr20	31972522	31972523	chr20:31972523:C:T	rs140563488	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr20	32143668	32143669	chr20:32143669:A:C	rs6061185	A	C	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr20	32563898	32563899	chr20:32563899:G:A	rs6119899	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	32677355	32677356	chr20:32677356:A:G	rs11699727	A	G	a	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr20	32677362	32677363	chr20:32677363:A:G	rs6057620	A	G	N	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr20	32811069	32811070	chr20:32811070:A:G	rs8118663	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	32813921	32813922	chr20:32813922:C:T	rs431066	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	32813929	32813930	chr20:32813930:T:C	rs401394	T	C	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	32915075	32915076	chr20:32915076:A:T	rs6058956	A	T	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr20	33725672	33725673	chr20:33725673:C:T	rs6059430	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	33915935	33915936	chr20:33915936:G:A	chr20:33915936:G:A	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	34938694	34938695	chr20:34938695:C:G	rs559108212	C	G	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	35148001	35148002	chr20:35148002:G:T	rs115920570	G	T	g	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	35436181	35436182	chr20:35436182:A:G	rs224333	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	35740104	35740105	chr20:35740105:A:G	chr20:35740105:A:G	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr20	35743131	35743132	chr20:35743132:G:C	rs143636108	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	8.23169439272197	TCTAATTACC
chr20	35782177	35782178	chr20:35782178:G:A	rs6060597	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr20	37134276	37134277	chr20:37134277:T:C	rs1618407	T	C	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	37240938	37240939	chr20:37240939:A:G	rs11086970	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr20	37289403	37289404	chr20:37289404:T:C	rs998311124	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	37816086	37816087	chr20:37816087:C:T	rs55722198	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	38175730	38175731	chr20:38175731:C:T	rs8123859	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.563442743761213	9.417472771290461	TCCAATTAGA
chr20	38175747	38175748	chr20:38175748:T:C	rs6098306	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	38197757	38197758	chr20:38197758:A:G	rs80000420	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	38685826	38685827	chr20:38685827:C:T	rs1885460	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	38824550	38824551	chr20:38824551:A:G	rs6065094	A	G	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr20	38864932	38864933	chr20:38864933:A:G	rs208814	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	39255503	39255504	chr20:39255504:G:C	rs6129232	G	C	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	39336558	39336559	chr20:39336559:G:A	rs2070291	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	39853740	39853741	chr20:39853741:C:T	rs114485429	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	40323515	40323516	chr20:40323516:A:G	rs565759547	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.49200941844807	2.5203297654273293	CCCAATTACA
chr20	40814265	40814266	chr20:40814266:G:T	rs111814313	G	T	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr20	40869437	40869438	chr20:40869438:A:T	rs190236469	A	T	A	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	2.919054870701048	CCCAATTAGA
chr20	41177622	41177623	chr20:41177623:C:T	rs3752304	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	41552452	41552453	chr20:41552453:T:C	rs6102460	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.9549935751004215	2.983313922079679	GCTAATTAAC
chr20	41688285	41688286	chr20:41688286:C:T	rs6129902	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.061628744770331	8.91565877229958	TCCAATTACA
chr20	41698372	41698373	chr20:41698373:C:A	rs116046344	C	A	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr20	42074486	42074487	chr20:42074487:C:T	rs2144011	C	T	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	42433307	42433308	chr20:42433308:A:G	rs73123336	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	42441891	42441892	chr20:42441892:G:A	rs760703	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	42485578	42485579	chr20:42485579:C:T	rs6093656	C	T	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	43427274	43427275	chr20:43427275:A:G	rs58801603	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	43506929	43506930	chr20:43506930:C:G	rs113243001	C	G	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr20	43845654	43845655	chr20:43845655:A:G	rs6073220	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr20	43849578	43849579	chr20:43849579:C:G	rs2017979	C	G	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr20	43925532	43925533	chr20:43925533:G:C	rs73118223	G	C	G	Alx1.mouse_homeodomain_1	8	1	+	8.145334108191209	7.643520109200326	TTCAATTAGA
chr20	43926040	43926041	chr20:43926041:T:C	rs742640	T	C	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr20	44133241	44133242	chr20:44133242:C:T	rs6073347	C	T	c	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	44174095	44174096	chr20:44174096:C:T	rs6073358	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	44174120	44174121	chr20:44174121:C:T	rs4812791	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr20	44218780	44218781	chr20:44218781:C:G	rs4810413	C	G	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	44218791	44218792	chr20:44218792:A:T	rs4812800	A	T	T	Alx1.mouse_homeodomain_1	8	1	+	8.1279520552385	7.147095123247572	CCCAATTAAA
chr20	44218799	44218800	chr20:44218800:G:C	rs4812801	G	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr20	44287840	44287841	chr20:44287841:T:C	rs2868089	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	44954709	44954710	chr20:44954710:C:G	rs75349244	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	9.158781247982416	7.846603954486855	TCTAATTAGC
chr20	45352085	45352086	chr20:45352086:T:C	rs1008953	T	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr20	45519173	45519174	chr20:45519174:A:G	rs6017593	A	G	g	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	46133256	46133257	chr20:46133257:T:C	rs1883838	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	8.16388906539059	3.176167149121609	CCTAATTAGG
chr20	46233861	46233862	chr20:46233862:G:A	rs8125325	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	46269250	46269251	chr20:46269251:A:G	rs2425825	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr20	46926796	46926797	chr20:46926797:G:A	rs6066118	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	47098116	47098117	chr20:47098117:G:A	rs188599956	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr20	47181686	47181687	chr20:47181687:A:G	rs6018325	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	47206087	47206088	chr20:47206088:G:A	rs189410617	G	A	g	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr20	47303042	47303043	chr20:47303043:C:T	rs6124993	C	T	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	47423629	47423630	chr20:47423630:A:G	rs4810637	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.061628744770331	5.454808854921641	TCCAATTACA
chr20	47774183	47774184	chr20:47774184:T:C	rs2840278	T	C	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	47774203	47774204	chr20:47774204:A:G	rs74545940	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	9.158781247982416	6.551961358133725	TCTAATTAGC
chr20	47782311	47782312	chr20:47782312:T:C	rs115576587	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	7.309859037861343	4.412764528524968	CCCAATTAGG
chr20	47881854	47881855	chr20:47881855:C:T	rs976941	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	48030541	48030542	chr20:48030542:C:T	rs55920738	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	48316638	48316639	chr20:48316639:A:G	rs393273	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	9.133492773520002	4.161813120499261	TTTAATTAAA
chr20	48513427	48513428	chr20:48513428:G:C	rs1190898161	G	C	-	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	48558183	48558184	chr20:48558184:C:T	rs528592269	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr20	48565097	48565098	chr20:48565098:G:A	rs7263262	G	A	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr20	48826886	48826887	chr20:48826887:G:A	rs2004772	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr20	48905006	48905007	chr20:48905007:A:C	rs4810884	A	C	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	49103848	49103849	chr20:49103849:G:C	rs6125551	G	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr20	49207502	49207503	chr20:49207503:T:A	rs6095462	T	A	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr20	49218529	49218530	chr20:49218530:G:A	rs6019692	G	A	-	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	49983797	49983798	chr20:49983798:G:A	rs111949175	G	A	.	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	50070877	50070878	chr20:50070878:A:T	rs9712448	A	T	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	50412149	50412150	chr20:50412150:G:A	rs384031	G	A	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr20	50441105	50441106	chr20:50441106:A:G	rs1810500	A	G	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr20	50441491	50441492	chr20:50441492:G:A	rs742600	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	50475558	50475559	chr20:50475559:G:A	rs6126016	G	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	50511702	50511703	chr20:50511703:G:A	rs6020572	G	A	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	50543406	50543407	chr20:50543407:T:A	rs4496379	T	A	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	51220272	51220273	chr20:51220273:G:A	rs73277539	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	51395322	51395323	chr20:51395323:T:C	rs4811171	T	C	-	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr20	51586186	51586187	chr20:51586187:A:G	rs141854770	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.867637029512398	8.01360700198315	TCTAATTAAG
chr20	51659786	51659787	chr20:51659787:T:G	rs2426355	T	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr20	51677856	51677857	chr20:51677857:T:C	rs6013252	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	51769949	51769950	chr20:51769950:G:C	rs6091366	G	C	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	51798211	51798212	chr20:51798212:T:G	rs6067941	T	G	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	52048525	52048526	chr20:52048526:G:A	rs149221133	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr20	52809094	52809095	chr20:52809095:T:G	rs6091597	T	G	G	Alx1.mouse_homeodomain_1	6	1	+	8.061628744770331	3.2464963518863947	TCCAATTACA
chr20	52978376	52978377	chr20:52978377:C:T	rs13042084	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr20	53142381	53142382	chr20:53142382:A:C	rs1293417	A	C	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr20	53283576	53283577	chr20:53283577:A:G	rs2741359	A	G	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr20	53795214	53795215	chr20:53795215:C:T	rs6126956	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	53830064	53830065	chr20:53830065:C:A	rs56246963	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.723290559459702	8.075112025548904	CCTAATTAAC
chr20	53830080	53830081	chr20:53830081:T:C	rs78888037	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr20	53900208	53900209	chr20:53900209:G:A	rs66914754	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr20	53939938	53939939	chr20:53939939:G:A	rs116708202	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	53979849	53979850	chr20:53979850:A:G	rs2299730	A	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr20	53979853	53979854	chr20:53979854:C:A	rs74691894	C	A	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr20	54059108	54059109	chr20:54059109:C:T	rs290430	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	54068384	54068385	chr20:54068385:C:A	rs6068765	C	A	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	54133163	54133164	chr20:54133164:T:G	rs1886308	T	G	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	54368618	54368619	chr20:54368619:T:G	rs6097944	T	G	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr20	54368724	54368725	chr20:54368725:C:T	rs73143321	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr20	54433733	54433734	chr20:54433734:G:T	rs8115818	G	T	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	54640969	54640970	chr20:54640970:C:T	rs6091941	C	T	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr20	55919921	55919922	chr20:55919922:G:A	rs6014555	G	A	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr20	55961333	55961334	chr20:55961334:A:G	rs1837026	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr20	56187825	56187826	chr20:56187826:C:T	rs143277245	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr20	56750304	56750305	chr20:56750305:A:G	rs1321863	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr20	57494348	57494349	chr20:57494349:C:A	chr20:57494349:C:A	C	A	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr20	57680625	57680626	chr20:57680626:C:T	rs62204322	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.16388906539059	7.745780429820584	CCTAATTAGG
chr20	57717090	57717091	chr20:57717091:C:T	rs76621877	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	57719494	57719495	chr20:57719495:G:A	rs55997418	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.869260531930455	7.451151896360449	CCCAATTAAC
chr20	57749136	57749137	chr20:57749137:A:G	rs146463061	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	57761673	57761674	chr20:57761674:A:T	rs6070254	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	57907605	57907606	chr20:57907606:C:T	rs437420	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	57943857	57943858	chr20:57943858:G:A	rs9680024	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr20	58094700	58094701	chr20:58094701:G:A	rs34836538	G	A	a	Alx1.mouse_homeodomain_1	9	1	+	7.377664365192722	8.061628744770331	TCCAATTACG
chr20	58341750	58341751	chr20:58341751:G:T	rs78941534	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	58376274	58376275	chr20:58376275:A:G	rs66976568	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr20	58448286	58448287	chr20:58448287:C:T	rs76295834	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr20	58547237	58547238	chr20:58547238:G:A	rs182437272	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr20	58580382	58580383	chr20:58580383:G:A	rs117657619	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	58883331	58883332	chr20:58883332:G:A	rs117844021	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr20	59153833	59153834	chr20:59153834:A:C	rs259990	A	C	C	Alx1.mouse_homeodomain_1	5	1	-	7.879478364183603	1.5904991294806436	TCCAATTAGG
chr20	59454254	59454255	chr20:59454255:A:C	rs56858342	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.346039445977318	4.215626752046856	CCTAATTACA
chr20	59646727	59646728	chr20:59646728:A:T	rs145477649	A	T	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr20	59813481	59813482	chr20:59813482:A:G	rs1338929	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	60332775	60332776	chr20:60332776:T:A	rs75267882	T	A	T	Alx1.mouse_homeodomain_1	9	1	-	8.91565877229958	7.920351646537226	TCTAATTACA
chr20	60395524	60395525	chr20:60395525:T:C	rs6092934	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	60564482	60564483	chr20:60564483:G:A	rs76088728	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr20	60993781	60993782	chr20:60993782:C:A	rs113796394	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	9.158781247982416	7.565469321814631	TCTAATTAGC
chr20	61699472	61699473	chr20:61699473:A:C	rs11700340	A	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr20	62030582	62030583	chr20:62030583:C:T	rs535139465	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr20	62507883	62507884	chr20:62507884:G:T	rs6089232	G	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	62507908	62507909	chr20:62507909:G:T	rs73918250	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr20	62786278	62786279	chr20:62786279:T:C	rs118006750	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	63140678	63140679	chr20:63140679:A:C	rs6122382	A	C	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	63253565	63253566	chr20:63253566:G:A	rs140682227	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	63628505	63628506	chr20:63628506:T:C	rs117699385	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	63829951	63829952	chr20:63829952:C:T	rs4809367	C	T	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	8989704	8989705	chr21:8989705:G:A	rs75467879	G	A	.	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr21	8989715	8989716	chr21:8989716:C:G	rs76531392	C	G	.	Alx1.mouse_homeodomain_1	9	1	-	8.867637029512398	9.292909885781963	TCTAATTAAG
chr21	8989737	8989738	chr21:8989738:C:G	rs866371896	C	G	.	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr21	8989743	8989744	chr21:8989744:T:C	rs77169237	T	C	.	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr21	8993866	8993867	chr21:8993867:A:C	rs1905887	A	C	.	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr21	8993869	8993870	chr21:8993870:T:A	rs1905888	T	A	.	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr21	10424248	10424249	chr21:10424249:T:G	rs10451816	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	9.133492773520002	4.318360380636065	TTTAATTAAA
chr21	10651660	10651661	chr21:10651661:G:A	rs28363862	G	A	.	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr21	14087278	14087279	chr21:14087279:C:T	rs13048370	C	T	-	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr21	14094390	14094391	chr21:14094391:C:G	rs55930907	C	G	c	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr21	14119076	14119077	chr21:14119077:A:G	rs1115648	A	G	a	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	14306959	14306960	chr21:14306960:C:G	rs138740037	C	G	C	Alx1.mouse_homeodomain_1	2	1	+	7.49200941844807	5.346541891482312	CCCAATTACA
chr21	15059084	15059085	chr21:15059085:G:A	rs2142217	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr21	15062104	15062105	chr21:15062105:C:A	rs8133012	C	A	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr21	15539431	15539432	chr21:15539432:T:C	rs2823350	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr21	15539446	15539447	chr21:15539447:C:A	rs2823351	C	A	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr21	15989166	15989167	chr21:15989167:C:G	rs2823533	C	G	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr21	16246746	16246747	chr21:16246747:C:A	rs556317351	C	A	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr21	16422687	16422688	chr21:16422688:T:A	rs9305765	T	A	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	17351351	17351352	chr21:17351352:A:G	rs2824282	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	8.305181923889696	8.17105328609015	CTTAATTAAC
chr21	17511975	17511976	chr21:17511976:T:C	chr21:17511976:T:C	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.74067261241241	3.768992959391669	TTTAATTAGC
chr21	17869178	17869179	chr21:17869179:G:A	rs66740171	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr21	18149026	18149027	chr21:18149027:T:C	rs71319673	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr21	18269380	18269381	chr21:18269381:C:T	rs9979816	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr21	18824528	18824529	chr21:18824529:G:C	rs17702418	G	C	G	Alx1.mouse_homeodomain_1	0	1	-	8.346039445977318	7.577742461618037	CCTAATTACA
chr21	19319336	19319337	chr21:19319337:C:T	rs1491658	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr21	19648644	19648645	chr21:19648645:T:C	rs2825709	T	C	C	Alx1.mouse_homeodomain_1	1	1	+	9.133492773520002	9.551601409090008	TTTAATTAAA
chr21	20419850	20419851	chr21:20419851:G:A	rs62207099	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.438879858252715	7.702264255798406	TCCAATTAAC
chr21	20688523	20688524	chr21:20688524:G:C	rs11088822	G	C	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr21	21080322	21080323	chr21:21080323:T:G	rs62207598	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.1279520552385	3.3128196623545625	CCCAATTAAA
chr21	21163030	21163031	chr21:21163031:A:C	rs2826715	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	21163034	21163035	chr21:21163035:T:A	rs11909075	T	A	T	Alx1.mouse_homeodomain_1	0	1	+	8.304751220453168	7.08695336022011	TCCAATTAGC
chr21	21546501	21546502	chr21:21546502:A:T	rs9976899	A	T	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr21	21921716	21921717	chr21:21921717:C:T	rs2827131	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr21	22585946	22585947	chr21:22585947:C:A	rs7509665	C	A	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr21	22904880	22904881	chr21:22904881:C:T	rs74685431	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	23494243	23494244	chr21:23494244:C:T	rs13049330	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr21	24615973	24615974	chr21:24615974:C:A	rs2408979	C	A	c	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	24897352	24897353	chr21:24897353:C:A	rs77969972	C	A	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr21	24939687	24939688	chr21:24939688:A:G	rs982885	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	24965839	24965840	chr21:24965840:G:A	rs8134488	G	A	G	Alx1.mouse_homeodomain_1	9	1	+	8.298017703190137	8.981982082767747	CCTAATTAAG
chr21	25512595	25512596	chr21:25512596:A:G	rs7276512	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	3.156272402217758	CCCAATTAAA
chr21	25951389	25951390	chr21:25951390:A:C	rs216779	A	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	26126272	26126273	chr21:26126273:T:G	rs2830069	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	8.656967248991535	4.526554555061072	TCTAATTACC
chr21	26719969	26719970	chr21:26719970:C:T	rs2830437	C	T	c	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr21	26719984	26719985	chr21:26719985:G:A	rs149781018	G	A	g	Alx1.mouse_homeodomain_1	1	1	-	7.735131894130908	7.317023258560902	CCCAATTAGC
chr21	26800936	26800937	chr21:26800937:T:C	rs16979116	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr21	26838337	26838338	chr21:26838338:T:C	rs229042	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr21	26849751	26849752	chr21:26849752:G:A	rs9305292	G	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	26849932	26849933	chr21:26849933:A:G	rs56829384	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr21	26925534	26925535	chr21:26925535:G:A	rs9977087	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr21	26926726	26926727	chr21:26926727:A:G	rs229086	A	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr21	26968369	26968370	chr21:26968370:A:G	chr21:26968370:A:G	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr21	27026635	27026636	chr21:27026636:T:A	rs9984674	T	A	T	Alx1.mouse_homeodomain_1	4	1	-	8.422165645528107	3.3473970987902018	TCTAATTAGT
chr21	28064042	28064043	chr21:28064043:T:C	rs1324248646	T	C	t	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr21	28537551	28537552	chr21:28537552:T:C	rs1289191509	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr21	28772140	28772141	chr21:28772141:G:A	rs78848610	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	28829383	28829384	chr21:28829384:T:C	rs4816332	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr21	28953607	28953608	chr21:28953608:T:G	rs2247324	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	8.422165645528107	2.1331864108251475	TCTAATTAGT
chr21	29003201	29003202	chr21:29003202:T:G	rs1028261126	T	G	t	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr21	29104704	29104705	chr21:29104705:G:C	rs546974575	G	C	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	29163855	29163856	chr21:29163856:C:G	rs2065272	C	G	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr21	29483593	29483594	chr21:29483594:G:A	rs762209	G	A	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr21	29616694	29616695	chr21:29616695:C:T	rs363439	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr21	30673033	30673034	chr21:30673034:T:C	rs992875	T	C	C	Alx1.mouse_homeodomain_1	1	1	+	8.23885861342153	8.656967248991535	TTTAATTACC
chr21	31252875	31252876	chr21:31252876:T:C	rs80288833	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr21	31368427	31368428	chr21:31368428:C:T	rs73195545	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr21	31772539	31772540	chr21:31772540:A:T	rs112039248	A	T	a	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr21	31875660	31875661	chr21:31875661:C:T	rs61377845	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	31930026	31930027	chr21:31930027:T:A	rs2409424	T	A	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr21	32348879	32348880	chr21:32348880:T:C	rs114001240	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	32348883	32348884	chr21:32348884:C:T	rs17616689	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	32808327	32808328	chr21:32808328:T:C	rs8128188	T	C	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr21	33235130	33235131	chr21:33235131:G:A	rs6517153	G	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr21	33303656	33303657	chr21:33303657:C:G	rs2040107	C	G	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	33324191	33324192	chr21:33324192:G:T	rs17875752	G	T	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr21	33324196	33324197	chr21:33324197:T:G	rs2834191	T	G	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	33364639	33364640	chr21:33364640:C:A	rs9978280	C	A	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	33364645	33364646	chr21:33364646:T:C	rs9978964	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	33385627	33385628	chr21:33385628:C:A	rs62226378	C	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	33951353	33951354	chr21:33951354:G:A	rs11701963	G	A	g	Alx1.mouse_homeodomain_1	9	1	-	8.23885861342153	7.50224301096722	TTTAATTACC
chr21	33977124	33977125	chr21:33977125:A:G	rs56996632	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr21	33977142	33977143	chr21:33977143:A:G	chr21:33977143:A:G	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	34167610	34167611	chr21:34167611:C:T	rs2834390	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr21	34361923	34361924	chr21:34361924:G:A	rs183575713	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr21	34600197	34600198	chr21:34600198:G:C	rs569065992	G	C	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	34693371	34693372	chr21:34693372:G:A	rs58440203	G	A	G	Alx1.mouse_homeodomain_1	9	1	+	8.16388906539059	8.8478534449682	CCTAATTAGG
chr21	34758054	34758055	chr21:34758055:C:T	rs7280132	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	34795483	34795484	chr21:34795484:A:C	rs117462132	A	C	A	Alx1.mouse_homeodomain_1	2	1	-	8.23885861342153	5.239361058926523	TTTAATTACC
chr21	34795491	34795492	chr21:34795492:T:A	rs189001829	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	35825517	35825518	chr21:35825518:G:A	rs7277356	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr21	35932860	35932861	chr21:35932861:G:A	rs35226007	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr21	35967193	35967194	chr21:35967194:C:G	rs2835187	C	G	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr21	36077420	36077421	chr21:36077421:A:C	rs2835269	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.91565877229958	4.785246078369116	TCTAATTACA
chr21	36441815	36441816	chr21:36441816:T:C	rs2835349	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	8.563442743761213	5.956622853912523	TCCAATTAGA
chr21	36677703	36677704	chr21:36677704:T:C	rs2835433	T	C	t	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr21	36705463	36705464	chr21:36705464:A:C	rs737489	A	C	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	37066645	37066646	chr21:37066646:A:G	rs116511474	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	37259327	37259328	chr21:37259328:G:A	rs2835686	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr21	37427536	37427537	chr21:37427537:G:A	rs2835732	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr21	37435323	37435324	chr21:37435324:T:C	chr21:37435324:T:C	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	7.8208649373008745	4.923770427964498	GCTAATTAGC
chr21	37594406	37594407	chr21:37594407:G:A	rs112841326	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr21	37707906	37707907	chr21:37707907:G:A	rs1628656	G	A	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr21	37877161	37877162	chr21:37877162:C:T	rs57264442	C	T	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr21	37994223	37994224	chr21:37994224:T:C	rs2836101	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	38675658	38675659	chr21:38675659:A:G	rs118189900	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr21	38832224	38832225	chr21:38832225:T:C	rs762387	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr21	39023416	39023417	chr21:39023417:C:T	rs2836845	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr21	39105164	39105165	chr21:39105165:G:A	rs182778951	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	39182766	39182767	chr21:39182767:C:T	rs73221193	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr21	39190203	39190204	chr21:39190204:C:T	rs2225425	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr21	39190238	39190239	chr21:39190239:A:T	rs2297257	A	T	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr21	39324296	39324297	chr21:39324297:G:A	rs9985067	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr21	39471776	39471777	chr21:39471777:A:G	rs13046275	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	39670270	39670271	chr21:39670271:T:C	rs16998106	T	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	39738354	39738355	chr21:39738355:A:G	rs4816642	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	39754803	39754804	chr21:39754804:G:A	rs2837157	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr21	40018929	40018930	chr21:40018930:C:T	rs9983328	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	9.158781247982416	8.74067261241241	TCTAATTAGC
chr21	40445471	40445472	chr21:40445472:T:C	rs2837628	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	40445498	40445499	chr21:40445499:A:C	rs7280016	A	C	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr21	40613821	40613822	chr21:40613822:T:G	rs6517602	T	G	G	Alx1.mouse_homeodomain_1	0	1	+	8.69757138156076	7.359655070879218	TCCAATTAAA
chr21	41023838	41023839	chr21:41023839:T:C	rs9977560	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr21	41113679	41113680	chr21:41113680:C:T	chr21:41113680:C:T	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	41147714	41147715	chr21:41147715:G:C	rs73362455	G	C	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr21	41184485	41184486	chr21:41184486:A:T	rs3949725	A	T	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr21	41786887	41786888	chr21:41786888:G:T	rs145680280	G	T	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr21	41881969	41881970	chr21:41881970:G:A	rs2839401	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr21	42396292	42396293	chr21:42396293:C:T	rs182152268	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr21	42811927	42811928	chr21:42811928:C:T	rs113609773	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr21	43088820	43088821	chr21:43088821:A:G	rs1672117	A	G	a	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	43352109	43352110	chr21:43352110:A:G	rs2838279	A	G	.	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	43373567	43373568	chr21:43373568:A:T	rs672948	A	T	.	Alx1.mouse_homeodomain_1	7	1	+	7.879478364183603	5.161483341976348	TCCAATTAGG
chr21	43373583	43373584	chr21:43373584:A:G	rs672929	A	G	.	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr21	43608833	43608834	chr21:43608834:A:G	rs11911483	A	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr21	43649065	43649066	chr21:43649066:T:A	rs35110281	T	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr21	43910517	43910518	chr21:43910518:T:C	rs116954058	T	C	t	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr21	43917563	43917564	chr21:43917564:A:G	rs58565118	A	G	a	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr21	43977086	43977087	chr21:43977087:A:G	rs2838456	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.879478364183603	2.907798711162862	TCCAATTAGG
chr21	44497376	44497377	chr21:44497377:T:C	rs1999332	T	C	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr21	44718929	44718930	chr21:44718930:C:T	rs173094	C	T	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr21	44753075	44753076	chr21:44753076:A:C	chr21:44753076:A:C	A	C	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr21	44753112	44753113	chr21:44753113:C:T	rs664353	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	44984775	44984776	chr21:44984776:C:T	rs11701587	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr21	45253646	45253647	chr21:45253647:T:G	rs13047104	T	G	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr21	46191370	46191371	chr21:46191371:T:C	rs73144744	T	C	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	10776187	10776188	chr22:10776188:C:T	rs1375869723	C	T	.	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	10782387	10782388	chr22:10782388:C:T	rs1404272582	C	T	.	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr22	11067746	11067747	chr22:11067747:A:C	rs2770501	A	C	.	Alx1.mouse_homeodomain_1	5	1	-	7.233317895140026	0.9443386604370666	CCCAATTACC
chr22	17216970	17216971	chr22:17216971:C:T	rs5748953	C	T	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	17406874	17406875	chr22:17406875:C:G	rs112040018	C	G	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr22	17477716	17477717	chr22:17477717:G:C	rs4819593	G	C	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	17776470	17776471	chr22:17776471:T:C	rs12627897	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	18907078	18907079	chr22:18907079:G:A	rs569961774	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	19218140	19218141	chr22:19218141:T:C	rs190943960	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr22	19558747	19558748	chr22:19558748:G:T	rs117961432	G	T	g	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	19568899	19568900	chr22:19568900:G:C	rs5746776	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr22	19632509	19632510	chr22:19632510:G:A	rs5992453	G	A	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	19663868	19663869	chr22:19663869:G:T	rs185858005	G	T	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr22	19691543	19691544	chr22:19691544:A:G	rs5992462	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr22	19848624	19848625	chr22:19848625:C:T	rs7288631	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	20079274	20079275	chr22:20079275:T:G	rs41281421	T	G	t	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	20419017	20419018	chr22:20419018:G:A	chr22:20419018:G:A	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr22	20571657	20571658	chr22:20571658:C:T	rs472836	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	20582046	20582047	chr22:20582047:C:T	rs646164	C	T	.	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	20936071	20936072	chr22:20936072:A:G	rs8140283	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr22	20978774	20978775	chr22:20978775:G:C	rs16988949	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.00112515077682	6.688947857281258	CCTAATTATA
chr22	21002829	21002830	chr22:21002830:G:A	rs71314757	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	7.319050938309992	6.974136643109494	GCTAATTACC
chr22	21568614	21568615	chr22:21568615:G:T	rs2266959	G	T	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	21678527	21678528	chr22:21678528:A:G	rs1647709	A	G	a	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr22	21876869	21876870	chr22:21876870:T:C	rs118027376	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	22039827	22039828	chr22:22039828:C:T	rs366116	C	T	c	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr22	22519681	22519682	chr22:22519682:T:C	rs79715018	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.020771222682711	3.049091569661969	TTCAATTAAC
chr22	22552970	22552971	chr22:22552971:A:G	rs113177640	A	G	a	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	22680760	22680761	chr22:22680761:G:A	rs7285234	G	A	.	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr22	22684907	22684908	chr22:22684908:G:A	rs72495410	G	A	.	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr22	22702475	22702476	chr22:22702476:C:A	rs149456536	C	A	.	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr22	22708036	22708037	chr22:22708037:C:G	rs5996352	C	G	.	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	22787970	22787971	chr22:22787971:A:G	rs75758834	A	G	.	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	22788008	22788009	chr22:22788009:A:G	rs4820530	A	G	.	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr22	22848194	22848195	chr22:22848195:T:C	rs16993790	T	C	.	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr22	22939432	22939433	chr22:22939433:T:C	rs2188131	T	C	.	Alx1.mouse_homeodomain_1	3	1	-	8.563873447197741	5.9570535573490515	CTTAATTAAA
chr22	23357469	23357470	chr22:23357470:G:A	rs114753621	G	A	g	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	23367423	23367424	chr22:23367424:A:G	rs112331205	A	G	a	Alx1.mouse_homeodomain_1	3	1	+	7.869260531930455	5.262440642081764	CCCAATTAAC
chr22	23367515	23367516	chr22:23367516:T:G	rs117580293	T	G	N	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr22	23367524	23367525	chr22:23367525:T:C	rs200470123	T	C	t	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	23548506	23548507	chr22:23548507:A:G	rs140187445	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	23660936	23660937	chr22:23660937:T:A	rs131436	T	A	.	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	23836944	23836945	chr22:23836945:G:A	rs1128127	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	23892671	23892672	chr22:23892672:A:G	rs12485058	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	24810640	24810641	chr22:24810641:T:C	rs991831877	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.01360700198315	3.041927348962409	TCCAATTAAG
chr22	24888048	24888049	chr22:24888049:T:G	rs139721	T	G	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	25007797	25007798	chr22:25007798:G:T	rs9612827	G	T	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	25702260	25702261	chr22:25702261:A:G	rs16980593	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	25970554	25970555	chr22:25970555:G:A	rs144059582	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr22	26171325	26171326	chr22:26171326:C:A	rs186168694	C	A	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr22	26643180	26643181	chr22:26643181:G:C	rs77229052	G	C	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	26673475	26673476	chr22:26673476:G:A	rs5761672	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	26768238	26768239	chr22:26768239:T:A	rs146003448	T	A	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	26800792	26800793	chr22:26800793:G:A	rs141284615	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr22	26845600	26845601	chr22:26845601:G:A	rs190379346	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr22	26845602	26845603	chr22:26845603:A:G	chr22:26845603:A:G	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr22	26903523	26903524	chr22:26903524:C:T	rs11705120	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	26952932	26952933	chr22:26952933:A:G	rs2331359	A	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr22	26977970	26977971	chr22:26977971:G:T	rs5752459	G	T	.	Alx1.mouse_homeodomain_1	9	1	-	8.075112025548904	8.333803548856949	ACTAATTAAC
chr22	27070666	27070667	chr22:27070667:A:C	rs16986745	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	27107742	27107743	chr22:27107743:C:T	rs115754088	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr22	27163939	27163940	chr22:27163940:G:A	rs7287230	G	A	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr22	27329517	27329518	chr22:27329518:C:G	rs9613425	C	G	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr22	27392818	27392819	chr22:27392819:G:T	rs13055758	G	T	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr22	27630405	27630406	chr22:27630406:C:T	rs73880596	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	27686717	27686718	chr22:27686718:G:A	rs134117	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr22	27803428	27803429	chr22:27803429:T:G	rs3788407	T	G	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	6.133995219024997	TTTAATTAAA
chr22	27850753	27850754	chr22:27850754:C:G	rs35707950	C	G	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr22	28009832	28009833	chr22:28009833:G:C	rs35906248	G	C	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	28299653	28299654	chr22:28299654:T:C	rs16986280	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr22	28403091	28403092	chr22:28403092:T:C	rs134545	T	C	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr22	28499005	28499006	chr22:28499006:T:G	rs695442	T	G	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr22	28608512	28608513	chr22:28608513:A:C	rs80099580	A	C	A	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.874801250211958	TTTAATTAAA
chr22	28696192	28696193	chr22:28696193:C:T	rs17507045	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr22	28739900	28739901	chr22:28739901:T:C	rs5762766	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.556294283327654	7.702264255798406	TCTAATTAAT
chr22	28986585	28986586	chr22:28986586:G:C	rs722590	G	C	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	29014243	29014244	chr22:29014244:A:C	rs4823003	A	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr22	29062452	29062453	chr22:29062453:A:G	rs134559	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	7.920351646537226	5.023257137200849	TCTAATTACT
chr22	29081395	29081396	chr22:29081396:T:G	rs134613	T	G	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	29114135	29114136	chr22:29114136:C:T	rs134684	C	T	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	29118658	29118659	chr22:29118659:T:C	rs4823011	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	29182862	29182863	chr22:29182863:G:A	rs78532079	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	29250105	29250106	chr22:29250106:A:G	rs4820800	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	7.886642584883163	2.914962931862422	TTCAATTAGC
chr22	29436163	29436164	chr22:29436164:A:G	rs12484616	A	G	-	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr22	29780807	29780808	chr22:29780808:G:A	chr22:29780808:G:A	G	A	g	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	29862037	29862038	chr22:29862038:A:T	rs117038267	A	T	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr22	30536685	30536686	chr22:30536686:T:C	rs1107844	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr22	30668748	30668749	chr22:30668749:A:G	rs34779325	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	30772327	30772328	chr22:30772328:G:A	rs136325	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr22	31220577	31220578	chr22:31220578:C:T	rs1123705	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr22	31574067	31574068	chr22:31574068:T:G	rs5753698	T	G	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr22	31943198	31943199	chr22:31943199:A:G	rs9609391	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.233317895140026	2.2616382421192847	CCCAATTACC
chr22	32366949	32366950	chr22:32366950:T:G	rs5998451	T	G	g	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr22	32469847	32469848	chr22:32469848:T:G	rs117539367	T	G	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr22	32584913	32584914	chr22:32584914:T:A	rs76227818	T	A	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr22	32589029	32589030	chr22:32589030:T:C	rs78360543	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.497550136729574	3.525870483708832	TTTAATTACA
chr22	33525119	33525120	chr22:33525120:G:A	rs138202536	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr22	33757791	33757792	chr22:33757792:T:C	rs481698	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	33757794	33757795	chr22:33757795:C:A	rs143618248	C	A	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	33757800	33757801	chr22:33757801:T:G	rs715482	T	G	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	33797077	33797078	chr22:33797078:C:T	rs5754676	C	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr22	33854645	33854646	chr22:33854646:T:C	rs715502	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	33875700	33875701	chr22:33875701:C:A	rs73154546	C	A	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr22	34105551	34105552	chr22:34105552:G:A	rs135198	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr22	34264926	34264927	chr22:34264927:A:G	rs202789	A	G	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	34503179	34503180	chr22:34503180:T:C	rs9610029	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	7.225526433079671	1.2986224459196072	GCCAATTAGA
chr22	34881755	34881756	chr22:34881756:A:G	rs5749989	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr22	35074128	35074129	chr22:35074129:C:T	rs11089727	C	T	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr22	35074158	35074159	chr22:35074159:T:C	rs9622120	T	C	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	35076742	35076743	chr22:35076743:G:A	rs8137467	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.00112515077682	7.583016515206815	CCTAATTATA
chr22	35337342	35337343	chr22:35337343:G:C	rs138793	G	C	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	35367320	35367321	chr22:35367321:G:A	rs9622182	G	A	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	35398415	35398416	chr22:35398416:A:G	rs4821398	A	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	35464569	35464570	chr22:35464570:G:T	rs28482795	G	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr22	35483087	35483088	chr22:35483088:C:T	rs73154026	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	35486731	35486732	chr22:35486732:C:T	rs28707161	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	35638298	35638299	chr22:35638299:T:A	rs117818378	T	A	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr22	35648347	35648348	chr22:35648348:T:C	rs560787049	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr22	36184793	36184794	chr22:36184794:C:T	rs546128042	C	T	c	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr22	36245411	36245412	chr22:36245412:G:A	rs9610466	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr22	36397443	36397444	chr22:36397444:C:T	rs111304764	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	36467327	36467328	chr22:36467328:C:A	rs139999	C	A	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr22	36470520	36470521	chr22:36470521:C:T	rs187307314	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	36531372	36531373	chr22:36531373:G:A	rs6000305	G	A	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr22	36531395	36531396	chr22:36531396:G:A	rs6000306	G	A	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	36588841	36588842	chr22:36588842:C:G	rs59382725	C	G	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	36857196	36857197	chr22:36857197:C:T	rs7287350	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	36972213	36972214	chr22:36972214:G:A	rs2858475	G	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr22	37189197	37189198	chr22:37189198:G:A	rs112326866	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	37589719	37589720	chr22:37589720:C:T	rs9622650	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr22	38188696	38188697	chr22:38188697:T:C	rs8140036	T	C	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	38927158	38927159	chr22:38927159:A:G	rs73159372	A	G	-	Alx1.mouse_homeodomain_1	2	1	-	8.23885861342153	7.384828585892281	TTTAATTACC
chr22	39117712	39117713	chr22:39117713:G:T	rs115291057	G	T	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	39211127	39211128	chr22:39211128:A:C	rs6001500	A	C	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	39318902	39318903	chr22:39318903:A:G	rs137625	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr22	39329274	39329275	chr22:39329275:C:T	rs5750789	C	T	c	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	40009893	40009894	chr22:40009894:A:G	rs17406386	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	3.2065887863599385	TTTAATTAAA
chr22	40190064	40190065	chr22:40190065:C:G	rs12628783	C	G	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr22	40486411	40486412	chr22:40486412:G:C	rs193014140	G	C	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr22	40711473	40711474	chr22:40711474:A:T	rs114893807	A	T	a	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	40797641	40797642	chr22:40797642:A:C	rs117827738	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.723290559459702	3.908158166575765	CCTAATTAAC
chr22	41174740	41174741	chr22:41174741:T:C	rs5758251	T	C	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr22	41191551	41191552	chr22:41191552:T:A	rs9607782	T	A	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	41205049	41205050	chr22:41205050:G:A	chr22:41205050:G:A	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr22	41669861	41669862	chr22:41669862:G:A	rs111823333	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	42399833	42399834	chr22:42399834:C:T	rs73435557	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	43025273	43025274	chr22:43025274:G:A	rs73179017	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.980732592286402	7.244116989832093	TGTAATTAAC
chr22	43025289	43025290	chr22:43025290:G:A	rs147407169	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	43025290	43025291	chr22:43025291:G:A	rs190819387	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	43066444	43066445	chr22:43066445:C:T	rs2235379	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	43326618	43326619	chr22:43326619:A:G	rs5759284	A	G	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	43485813	43485814	chr22:43485814:T:C	rs28517761	T	C	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	43587881	43587882	chr22:43587882:G:A	rs5764598	G	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	44103208	44103209	chr22:44103209:G:C	rs1018419	G	C	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	44251539	44251540	chr22:44251540:G:A	rs9614222	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr22	44255690	44255691	chr22:44255691:T:G	rs6006712	T	G	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	44271976	44271977	chr22:44271977:A:G	rs135413	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr22	44344843	44344844	chr22:44344844:G:A	rs10775786	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	44367871	44367872	chr22:44367872:G:A	rs763041	G	A	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr22	44453977	44453978	chr22:44453978:A:G	rs571292703	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	44538002	44538003	chr22:44538003:C:T	rs1124898	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr22	44575033	44575034	chr22:44575034:C:T	rs117423893	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.874801250211958	8.138185647757648	TTTAATTAAC
chr22	44580552	44580553	chr22:44580553:G:C	rs112181786	G	C	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr22	44621183	44621184	chr22:44621184:G:A	rs958708325	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr22	44759407	44759408	chr22:44759408:C:T	rs7284294	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	44787088	44787089	chr22:44787089:A:C	rs7289667	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	44798471	44798472	chr22:44798472:T:G	rs78469259	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	9.158781247982416	5.028368554051954	TCTAATTAGC
chr22	45031704	45031705	chr22:45031705:C:T	rs5016582	C	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr22	45221604	45221605	chr22:45221605:C:T	rs7288118	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	7.886642584883163	8.020771222682711	TTCAATTAGC
chr22	45234987	45234988	chr22:45234988:T:C	rs2294197	T	C	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr22	45234993	45234994	chr22:45234994:T:C	rs2294198	T	C	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr22	45478251	45478252	chr22:45478252:G:A	rs80169082	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr22	45532138	45532139	chr22:45532139:T:C	rs136738	T	C	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	45776805	45776806	chr22:45776806:T:C	rs77964836	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	45866028	45866029	chr22:45866029:T:C	rs136042	T	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	45978876	45978877	chr22:45978877:T:C	rs749424335	T	C	t	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr22	46074074	46074075	chr22:46074075:G:A	rs557147848	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr22	46264272	46264273	chr22:46264273:G:A	rs113959594	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr22	46684567	46684568	chr22:46684568:T:C	rs710124	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr22	46747877	46747878	chr22:46747878:A:G	rs17761956	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	46747901	46747902	chr22:46747902:A:G	rs62233769	A	G	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr22	46858332	46858333	chr22:46858333:T:A	rs147349817	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	46913689	46913690	chr22:46913690:G:A	rs16995974	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.020771222682711	7.284155620228401	TTCAATTAAC
chr22	47059701	47059702	chr22:47059702:A:G	rs142292501	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	47068964	47068965	chr22:47068965:A:G	rs6009119	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	47102939	47102940	chr22:47102940:A:C	rs138739003	A	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr22	47122934	47122935	chr22:47122935:G:A	rs2295245	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.23885861342153	7.893944318221031	TTTAATTACC
chr22	47188754	47188755	chr22:47188755:G:A	rs6008070	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	47829633	47829634	chr22:47829634:A:G	rs5766896	A	G	g	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr22	47839456	47839457	chr22:47839457:A:G	rs1010615	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr22	47852147	47852148	chr22:47852148:G:A	rs1807611	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	48025171	48025172	chr22:48025172:A:G	rs9615257	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	48025188	48025189	chr22:48025189:A:C	rs135331	A	C	A	Alx1.mouse_homeodomain_1	7	1	+	8.17105328609015	4.892607402830049	CTTAATTAGC
chr22	48056137	48056138	chr22:48056138:A:G	rs9615746	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	48095342	48095343	chr22:48095343:C:T	rs5768344	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr22	48199746	48199747	chr22:48199747:A:T	rs133536	A	T	g	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr22	48224971	48224972	chr22:48224972:A:C	rs5767067	A	C	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr22	48346843	48346844	chr22:48346844:A:G	rs2072725	A	G	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr22	48428851	48428852	chr22:48428852:G:A	rs6007851	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	48487820	48487821	chr22:48487821:A:C	rs73171469	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	9.133492773520002	8.497550136729574	TTTAATTAAA
chr22	48500682	48500683	chr22:48500683:T:C	rs76089635	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr22	48516186	48516187	chr22:48516187:G:A	rs5767181	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr22	48683340	48683341	chr22:48683341:G:A	rs6010583	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr22	49016384	49016385	chr22:49016385:A:C	rs1548245	A	C	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr22	49067369	49067370	chr22:49067370:G:A	rs79308788	G	A	g	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	49140490	49140491	chr22:49140491:A:G	rs62221359	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr22	49162844	49162845	chr22:49162845:T:C	rs5769439	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	49274207	49274208	chr22:49274208:A:G	rs848709	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr22	49381082	49381083	chr22:49381083:T:C	rs5770341	T	C	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	49537486	49537487	chr22:49537487:T:C	rs5770526	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	49619753	49619754	chr22:49619754:G:T	rs5769707	G	T	G	Alx1.mouse_homeodomain_1	8	1	+	7.8208649373008745	6.974136643109494	GCTAATTAGC
chr22	49628746	49628747	chr22:49628747:C:G	rs9627755	C	G	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	49628768	49628769	chr22:49628769:T:C	rs186632581	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.16388906539059	5.266794556054214	CCTAATTAGG
chr22	50117205	50117206	chr22:50117206:C:T	rs882753	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	7.309859037861343	7.44398767566089	CCCAATTAGG
chr22	50200890	50200891	chr22:50200891:C:A	rs145912868	C	A	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	50200891	50200892	chr22:50200892:G:A	chr22:50200892:G:A	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	50200919	50200920	chr22:50200920:A:T	rs990298837	A	T	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr22	50623574	50623575	chr22:50623575:G:A	rs79823940	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr22	50623622	50623623	chr22:50623623:G:T	rs6009939	G	T	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	973625	973626	chr3:973626:G:A	rs114663153	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	1225501	1225502	chr3:1225502:G:A	rs3772345	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	1528392	1528393	chr3:1528393:A:G	rs41418053	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr3	2108715	2108716	chr3:2108716:C:A	rs2729005	C	A	A	Alx1.mouse_homeodomain_1	8	1	-	8.74067261241241	7.893944318221031	TTTAATTAGC
chr3	2108722	2108723	chr3:2108723:A:G	rs148992442	A	G	A	Alx1.mouse_homeodomain_1	1	1	-	8.74067261241241	9.158781247982416	TTTAATTAGC
chr3	2173304	2173305	chr3:2173305:C:T	rs13095138	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	2241687	2241688	chr3:2241688:C:G	rs9870707	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	2522064	2522065	chr3:2522065:T:C	rs7624709	T	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	2873729	2873730	chr3:2873730:A:G	rs34758591	A	G	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	3066557	3066558	chr3:3066558:T:G	rs340829	T	G	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	3303573	3303574	chr3:3303574:T:C	rs1159830	T	C	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	3350978	3350979	chr3:3350979:T:G	rs57880031	T	G	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	3372316	3372317	chr3:3372317:C:T	rs1508738	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	3386513	3386514	chr3:3386514:G:C	rs1508742	G	C	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	3821594	3821595	chr3:3821595:T:C	rs696489	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	3930433	3930434	chr3:3930434:A:C	rs9866915	A	C	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	4587823	4587824	chr3:4587824:T:G	rs74799692	T	G	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	4832110	4832111	chr3:4832111:T:C	rs3805030	T	C	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	4982310	4982311	chr3:4982311:A:G	rs6779816	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	5227425	5227426	chr3:5227426:A:T	rs341972	A	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	5295363	5295364	chr3:5295364:C:T	rs1391962	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	5535413	5535414	chr3:5535414:C:G	rs9844383	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	6188865	6188866	chr3:6188866:G:T	rs12374158	G	T	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr3	7934296	7934297	chr3:7934297:A:C	rs59961678	A	C	C	Alx1.mouse_homeodomain_1	6	1	-	8.1279520552385	3.3128196623545625	CCCAATTAAA
chr3	8486660	8486661	chr3:8486661:C:T	rs76361731	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	9121582	9121583	chr3:9121583:C:T	rs6443222	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	9223935	9223936	chr3:9223936:G:A	rs1028154	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	9415673	9415674	chr3:9415674:A:G	rs4308263	A	G	G	Alx1.mouse_homeodomain_1	5	1	-	8.298017703190137	3.310295786921156	CCTAATTAAG
chr3	9716308	9716309	chr3:9716309:T:C	rs697819	T	C	t	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr3	9772564	9772565	chr3:9772565:T:G	rs34127563	T	G	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	9807046	9807047	chr3:9807047:G:A	rs41278553	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	10600503	10600504	chr3:10600504:A:T	rs192994067	A	T	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	10934569	10934570	chr3:10934570:G:A	rs3774074	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	10934604	10934605	chr3:10934605:T:C	rs2697161	T	C	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	11371912	11371913	chr3:11371913:T:G	rs7638724	T	G	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	11638442	11638443	chr3:11638443:A:C	chr3:11638443:A:C	A	C	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	12287432	12287433	chr3:12287433:C:T	rs17029002	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	12296713	12296714	chr3:12296714:T:G	rs6808179	T	G	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	12507443	12507444	chr3:12507444:G:C	rs299653	G	C	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr3	12545442	12545443	chr3:12545443:T:C	rs1437564392	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	12652950	12652951	chr3:12652951:A:T	rs9819831	A	T	N	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	12652951	12652952	chr3:12652952:A:T	rs9819832	A	T	a	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	13107371	13107372	chr3:13107372:G:A	rs17833015	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	13301487	13301488	chr3:13301488:C:T	rs143799851	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	13451944	13451945	chr3:13451945:A:C	chr3:13451945:A:C	A	C	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	13465626	13465627	chr3:13465627:T:C	rs352386	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	14332909	14332910	chr3:14332910:G:T	rs113680471	G	T	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	14458996	14458997	chr3:14458997:C:G	rs74710075	C	G	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	14601383	14601384	chr3:14601384:A:G	rs12631299	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	15259193	15259194	chr3:15259194:G:A	rs10510435	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	15795513	15795514	chr3:15795514:C:T	rs11720297	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	15861823	15861824	chr3:15861824:G:T	rs11128765	G	T	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	15978970	15978971	chr3:15978971:C:T	rs189233495	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	16053247	16053248	chr3:16053248:T:C	rs62233377	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	16514691	16514692	chr3:16514692:C:G	rs1429162	C	G	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	16527957	16527958	chr3:16527958:G:T	rs34718285	G	T	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	16788822	16788823	chr3:16788823:C:T	rs76062350	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	16817476	16817477	chr3:16817477:G:A	rs9842181	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	16869163	16869164	chr3:16869164:C:T	rs12485511	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	16985271	16985272	chr3:16985272:T:A	rs34053933	T	A	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	17179759	17179760	chr3:17179760:C:A	rs1463222	C	A	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	17194951	17194952	chr3:17194952:T:C	rs73031275	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr3	17209321	17209322	chr3:17209322:A:C	rs76697713	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	17303058	17303059	chr3:17303059:C:A	rs283941	C	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	17945907	17945908	chr3:17945908:T:G	rs6577604	T	G	G	Alx1.mouse_homeodomain_1	3	1	-	8.723290559459702	4.59287786552924	CCTAATTAAC
chr3	18246818	18246819	chr3:18246819:C:G	rs13078233	C	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	18269384	18269385	chr3:18269385:T:G	rs34966162	T	G	G	Alx1.mouse_homeodomain_1	5	1	+	9.551601409090008	3.2626221743870487	TCTAATTAAA
chr3	18758454	18758455	chr3:18758455:C:T	rs9849016	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr3	19348496	19348497	chr3:19348497:T:C	rs553272725	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	20040962	20040963	chr3:20040963:C:T	chr3:20040963:C:T	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	20478556	20478557	chr3:20478557:T:C	rs58534973	T	C	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr3	20539945	20539946	chr3:20539946:T:A	rs76542797	T	A	t	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	20648556	20648557	chr3:20648557:T:C	rs62237469	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	20648578	20648579	chr3:20648579:A:T	rs73179883	A	T	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	20677644	20677645	chr3:20677645:G:A	rs116682001	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.981982082767747	9.551601409090008	CCTAATTAAA
chr3	20739509	20739510	chr3:20739510:T:C	rs11918349	T	C	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	21063105	21063106	chr3:21063106:G:C	rs9835240	G	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	21238813	21238814	chr3:21238814:T:C	rs7615883	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	21735666	21735667	chr3:21735667:T:G	rs13072271	T	G	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	21953189	21953190	chr3:21953190:T:C	rs630769	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	22013917	22013918	chr3:22013918:G:A	rs114756882	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	22082053	22082054	chr3:22082054:C:G	rs1824976	C	G	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	22176405	22176406	chr3:22176406:A:C	rs530422944	A	C	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr3	22307212	22307213	chr3:22307213:G:A	rs6550675	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr3	22795437	22795438	chr3:22795438:C:G	rs77902241	C	G	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	22795479	22795480	chr3:22795480:T:C	rs296155	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	23122257	23122258	chr3:23122258:T:C	rs4634143	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr3	23329605	23329606	chr3:23329606:A:G	rs117741554	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	23915212	23915213	chr3:23915213:G:C	rs13100706	G	C	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	24339894	24339895	chr3:24339895:T:G	rs7635707	T	G	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	24831811	24831812	chr3:24831812:T:C	rs9818530	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	25024157	25024158	chr3:25024158:T:A	rs873391	T	A	A	Alx1.mouse_homeodomain_1	8	1	-	8.874801250211958	7.893944318221031	TTTAATTAAC
chr3	25024170	25024171	chr3:25024171:A:G	rs873390	A	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	25047186	25047187	chr3:25047187:T:A	rs369536978	T	A	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr3	25351088	25351089	chr3:25351089:A:G	rs17016260	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	25421219	25421220	chr3:25421220:C:T	rs189886817	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	25445268	25445269	chr3:25445269:C:G	rs76913742	C	G	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	25503707	25503708	chr3:25503708:T:C	rs573099172	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	26083141	26083142	chr3:26083142:T:G	rs9851319	T	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	26463925	26463926	chr3:26463926:C:T	rs4352344	C	T	T	Alx1.mouse_homeodomain_1	1	1	+	8.981982082767747	8.563873447197741	CCTAATTAAA
chr3	26719500	26719501	chr3:26719501:A:G	rs78226009	A	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	26840617	26840618	chr3:26840618:C:T	rs13070179	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	27034701	27034702	chr3:27034702:G:A	rs4973851	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	27074813	27074814	chr3:27074814:C:T	rs17019306	C	T	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	27342997	27342998	chr3:27342998:C:T	rs11708152	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.49200941844807	7.073900782878065	CCCAATTACA
chr3	27680665	27680666	chr3:27680666:A:G	rs57437987	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	27992789	27992790	chr3:27992790:T:C	rs2127011	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	28280396	28280397	chr3:28280397:G:A	rs62252069	G	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	28328927	28328928	chr3:28328928:G:A	rs62251110	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	29333325	29333326	chr3:29333326:C:T	rs112780492	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	29333371	29333372	chr3:29333372:T:C	rs7641785	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	29334656	29334657	chr3:29334657:T:C	rs61458296	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	29440372	29440373	chr3:29440373:T:A	rs1438337	T	A	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	29729738	29729739	chr3:29729739:T:C	rs55667387	T	C	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr3	30206732	30206733	chr3:30206733:T:G	rs1836180	T	G	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	30227140	30227141	chr3:30227141:C:T	rs892414	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	30749437	30749438	chr3:30749438:A:G	rs9310941	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	30987413	30987414	chr3:30987414:C:G	rs62233440	C	G	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	31790507	31790508	chr3:31790508:C:A	rs74926335	C	A	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	31793430	31793431	chr3:31793431:A:T	rs75698828	A	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	32048920	32048921	chr3:32048921:A:C	rs6778224	A	C	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr3	32143024	32143025	chr3:32143025:A:T	rs2122852	A	T	-	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	32143025	32143026	chr3:32143026:A:T	rs2122851	A	T	-	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	32338377	32338378	chr3:32338378:T:C	rs7637865	T	C	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	32578490	32578491	chr3:32578491:C:T	rs9843216	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	32697644	32697645	chr3:32697645:A:G	rs6550152	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	32698610	32698611	chr3:32698611:T:C	rs7612101	T	C	C	Alx1.mouse_homeodomain_1	2	1	+	9.551601409090008	8.69757138156076	TCTAATTAAA
chr3	32843640	32843641	chr3:32843641:A:G	rs953103645	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	32850272	32850273	chr3:32850273:T:G	rs78298453	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	32850274	32850275	chr3:32850275:G:T	rs9848887	G	T	g	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	33217570	33217571	chr3:33217571:C:T	rs34904621	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	34017320	34017321	chr3:34017321:C:A	rs78743745	C	A	.	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	34068696	34068697	chr3:34068697:A:T	rs79659089	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	8.563442743761213	4.835961470069605	TCCAATTAGA
chr3	34068720	34068721	chr3:34068721:C:A	rs78095822	C	A	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr3	34310970	34310971	chr3:34310971:G:A	rs9826990	G	A	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	34387597	34387598	chr3:34387598:C:T	rs1211518	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	34626642	34626643	chr3:34626643:G:A	rs146794762	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	34812764	34812765	chr3:34812765:C:G	rs633214	C	G	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	35615998	35615999	chr3:35615999:T:A	rs9828809	T	A	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	35616006	35616007	chr3:35616007:G:A	rs9809295	G	A	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	36296588	36296589	chr3:36296589:G:A	rs73068125	G	A	g	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	36880927	36880928	chr3:36880928:A:C	rs7633292	A	C	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr3	37027065	37027066	chr3:37027066:G:A	rs62244263	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr3	37184500	37184501	chr3:37184501:A:G	rs113134154	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	37691563	37691564	chr3:37691564:A:C	rs112975564	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	37825165	37825166	chr3:37825166:C:G	rs116905577	C	G	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	38070206	38070207	chr3:38070207:G:A	rs6778943	G	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	39466088	39466089	chr3:39466089:T:C	rs1768149	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	8.874801250211958	3.8870793339429763	TTTAATTAAC
chr3	39780425	39780426	chr3:39780426:C:G	rs11720520	C	G	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	40211925	40211926	chr3:40211926:C:T	rs1799427	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	40337185	40337186	chr3:40337186:C:T	rs10865895	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	40494979	40494980	chr3:40494980:T:C	rs540523481	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	40524102	40524103	chr3:40524103:G:A	rs6599108	G	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	40597700	40597701	chr3:40597701:A:G	rs78812309	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	40997940	40997941	chr3:40997941:C:A	rs375962021	C	A	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr3	41011712	41011713	chr3:41011713:G:A	rs74490745	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	41034405	41034406	chr3:41034406:G:C	rs78398770	G	C	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	41327687	41327688	chr3:41327688:C:T	rs188030731	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr3	41500978	41500979	chr3:41500979:G:A	rs9821623	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	41966357	41966358	chr3:41966358:T:C	rs73073229	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.74067261241241	2.813768625252347	TTTAATTAGC
chr3	41986082	41986083	chr3:41986083:C:T	rs537725058	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	42146931	42146932	chr3:42146932:A:G	rs2173335	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	42369164	42369165	chr3:42369165:A:G	rs6768069	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.91565877229958	6.018564262963203	TCTAATTACA
chr3	42739823	42739824	chr3:42739824:G:A	rs11709500	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	43754233	43754234	chr3:43754234:C:T	rs12330768	C	T	C	Alx1.mouse_homeodomain_1	9	1	-	8.867637029512398	9.551601409090008	TCTAATTAAG
chr3	43768906	43768907	chr3:43768907:C:T	rs577249700	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	44022643	44022644	chr3:44022644:G:A	rs12632327	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	44084326	44084327	chr3:44084327:A:T	rs9311349	A	T	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	44099521	44099522	chr3:44099522:A:C	rs74790989	A	C	A	Alx1.mouse_homeodomain_1	2	1	-	8.723290559459702	5.723793004964697	CCTAATTAAC
chr3	44513694	44513695	chr3:44513695:T:C	rs4535266	T	C	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	45016133	45016134	chr3:45016134:C:T	rs9819447	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	45184995	45184996	chr3:45184996:G:C	rs17077434	G	C	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	45605730	45605731	chr3:45605731:C:T	rs2272776	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	45634854	45634855	chr3:45634855:C:T	rs115886979	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	46108626	46108627	chr3:46108627:C:T	rs1546079	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr3	46108643	46108644	chr3:46108644:T:C	rs1546078	T	C	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr3	46108663	46108664	chr3:46108664:C:A	rs13073861	C	A	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	46313480	46313481	chr3:46313481:C:T	rs6441964	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	46327542	46327543	chr3:46327543:C:G	rs187523129	C	G	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	46454225	46454226	chr3:46454226:C:T	rs17135	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	9.158781247982416	8.74067261241241	TCTAATTAGC
chr3	46612094	46612095	chr3:46612095:T:C	rs115892515	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.802937221462287	2.8312575684415457	TCCAATTACC
chr3	46612118	46612119	chr3:46612119:A:C	rs75478177	A	C	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	46614860	46614861	chr3:46614861:A:G	rs873382	A	G	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	46724395	46724396	chr3:46724396:G:T	rs56720140	G	T	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	46959115	46959116	chr3:46959116:T:C	rs11130110	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	47449002	47449003	chr3:47449003:G:A	rs9683177	G	A	G	Alx1.mouse_homeodomain_1	9	1	+	8.16388906539059	8.8478534449682	CCTAATTAGG
chr3	49455047	49455048	chr3:49455048:C:G	rs9841110	C	G	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	50431059	50431060	chr3:50431060:C:T	rs2282757	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	50516030	50516031	chr3:50516031:G:C	rs145170305	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	50652919	50652920	chr3:50652920:A:C	rs539073051	A	C	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr3	50652920	50652921	chr3:50652921:G:A	rs553968360	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	51902542	51902543	chr3:51902543:C:A	chr3:51902543:C:A	C	A	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	51902542	51902543	chr3:51902543:C:G	rs7373140	C	G	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	51902565	51902566	chr3:51902566:A:G	rs183367281	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr3	51902585	51902586	chr3:51902586:C:G	rs766888193	C	G	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	52056571	52056572	chr3:52056572:G:A	rs554218405	G	A	-	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	52056580	52056581	chr3:52056581:G:C	rs1161656240	G	C	-	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr3	52109487	52109488	chr3:52109488:C:A	rs9874939	C	A	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	52685071	52685072	chr3:52685072:C:T	rs3733039	C	T	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	52721569	52721570	chr3:52721570:A:G	rs57946083	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	52721575	52721576	chr3:52721576:A:T	rs11130319	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	53220318	53220319	chr3:53220319:G:T	rs1441730483	G	T	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	53220319	53220320	chr3:53220320:C:T	rs148512888	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr3	53220321	53220322	chr3:53220322:C:G	rs6773409	C	G	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	53489757	53489758	chr3:53489758:A:T	rs312482	A	T	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	53890351	53890352	chr3:53890352:A:C	rs11717931	A	C	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	54223085	54223086	chr3:54223086:T:C	rs35100472	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	54878393	54878394	chr3:54878394:G:T	rs77997915	G	T	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	55128670	55128671	chr3:55128671:T:C	rs67026078	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	55555149	55555150	chr3:55555150:C:T	rs62251508	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	55716303	55716304	chr3:55716304:G:C	rs756036	G	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr3	56255871	56255872	chr3:56255872:G:C	rs35110829	G	C	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr3	56467554	56467555	chr3:56467555:T:G	chr3:56467555:T:G	T	G	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	56862979	56862980	chr3:56862980:G:A	rs114093551	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	56997992	56997993	chr3:56997993:G:A	rs6802094	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	57128249	57128250	chr3:57128250:G:A	rs75139370	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr3	57592645	57592646	chr3:57592646:C:T	rs7644731	C	T	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	57709779	57709780	chr3:57709780:A:G	rs114951575	A	G	C	Alx1.mouse_homeodomain_1	7	1	+	8.312052953791037	2.385148966630972	TCTAATTATC
chr3	57950400	57950401	chr3:57950401:A:T	rs73090338	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	57950401	57950402	chr3:57950402:T:A	rs183853	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	58410386	58410387	chr3:58410387:T:C	rs62258126	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	58434814	58434815	chr3:58434815:T:C	rs11924677	T	C	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	58479455	58479456	chr3:58479456:A:G	rs9852465	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	58662303	58662304	chr3:58662304:T:C	rs4020782	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.874801250211958	8.020771222682711	TTTAATTAAC
chr3	58662317	58662318	chr3:58662318:G:C	rs1867424	G	C	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr3	58707211	58707212	chr3:58707212:T:C	rs7635919	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	59515624	59515625	chr3:59515625:C:T	rs12629410	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	59775856	59775857	chr3:59775857:T:C	rs4679505	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.422165645528107	7.852546319205846	TCTAATTAGT
chr3	59830860	59830861	chr3:59830861:G:C	rs17296496	G	C	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	59949699	59949700	chr3:59949700:T:G	rs55649496	T	G	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	59949724	59949725	chr3:59949725:T:C	rs3821476	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	59996609	59996610	chr3:59996610:C:G	rs17061716	C	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	60127102	60127103	chr3:60127103:A:G	rs55659703	A	G	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	60246496	60246497	chr3:60246497:T:C	rs11715172	T	C	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	60351918	60351919	chr3:60351919:G:A	rs6764498	G	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	60379129	60379130	chr3:60379130:T:C	rs17062882	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.869260531930455	2.8975808789097135	CCCAATTAAC
chr3	60558745	60558746	chr3:60558746:A:C	rs6805412	A	C	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	60752951	60752952	chr3:60752952:C:T	rs78091203	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.147095123247572	CCCAATTACA
chr3	61333623	61333624	chr3:61333624:T:G	rs552095441	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	61917318	61917319	chr3:61917319:A:G	rs115499591	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	61948791	61948792	chr3:61948792:T:C	rs1479400	T	C	t	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	62011692	62011693	chr3:62011693:G:T	rs6794405	G	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	62876438	62876439	chr3:62876439:C:G	rs141863107	C	G	C	Alx1.mouse_homeodomain_1	9	1	+	8.312052953791037	7.886780097521472	TCTAATTATC
chr3	63052271	63052272	chr3:63052272:C:T	rs749244	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr3	63209799	63209800	chr3:63209800:A:G	rs6796841	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr3	63240002	63240003	chr3:63240003:T:A	rs12632294	T	A	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	63600613	63600614	chr3:63600614:G:C	rs1874386	G	C	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	63613511	63613512	chr3:63613512:C:T	rs7627288	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	64242071	64242072	chr3:64242072:T:C	rs3911777	T	C	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	64340603	64340604	chr3:64340604:T:C	rs75026650	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.74067261241241	8.17105328609015	TTTAATTAGC
chr3	64350233	64350234	chr3:64350234:T:C	rs6445398	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.981982082767747	6.375162192919057	CCTAATTAAA
chr3	64350249	64350250	chr3:64350250:G:A	rs13322726	G	A	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	64399280	64399281	chr3:64399281:C:A	rs985750169	C	A	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	64566788	64566789	chr3:64566789:C:T	rs17071083	C	T	c	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	64595514	64595515	chr3:64595515:C:T	rs79094831	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	64650451	64650452	chr3:64650452:G:A	rs9851598	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	64911595	64911596	chr3:64911596:C:A	rs793295	C	A	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	64957306	64957307	chr3:64957307:G:A	rs56095323	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	64976554	64976555	chr3:64976555:C:T	rs12107001	C	T	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	64977874	64977875	chr3:64977875:G:A	rs6445437	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	7.233317895140026	6.4967022926857165	CCCAATTACC
chr3	64977879	64977880	chr3:64977880:T:C	rs71306745	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.233317895140026	2.2616382421192847	CCCAATTACC
chr3	64977900	64977901	chr3:64977901:C:G	rs6445438	C	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	65568775	65568776	chr3:65568776:A:G	rs17073122	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	65568783	65568784	chr3:65568784:C:T	rs1980332	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.422165645528107	8.004057009958101	TCTAATTAGT
chr3	65590640	65590641	chr3:65590641:C:T	rs954232	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	65884140	65884141	chr3:65884141:C:G	rs71306784	C	G	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	65892117	65892118	chr3:65892118:A:G	rs71306789	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	65894663	65894664	chr3:65894664:A:C	rs35482956	A	C	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	66032035	66032036	chr3:66032036:T:A	rs28480345	T	A	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	66254294	66254295	chr3:66254295:A:T	rs1680406	A	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	66386466	66386467	chr3:66386467:T:C	rs13063913	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	66816386	66816387	chr3:66816387:T:A	rs6549425	T	A	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	68256741	68256742	chr3:68256742:G:A	rs10440086	G	A	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr3	68265830	68265831	chr3:68265831:G:A	rs1491732	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	68287741	68287742	chr3:68287742:A:G	rs1110841	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	68357622	68357623	chr3:68357623:T:C	rs262245	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	68357628	68357629	chr3:68357629:G:C	rs262244	G	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr3	68446772	68446773	chr3:68446773:G:C	rs1022109	G	C	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	69370081	69370082	chr3:69370082:G:A	rs56411124	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	69825145	69825146	chr3:69825146:A:G	rs55735918	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr3	69946353	69946354	chr3:69946354:A:G	rs76905209	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr3	70264423	70264424	chr3:70264424:A:G	rs138709924	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	70471765	70471766	chr3:70471766:G:C	rs12494424	G	C	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	70571779	70571780	chr3:70571780:T:C	rs4974276	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	70604065	70604066	chr3:70604066:T:C	rs75311196	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	71302939	71302940	chr3:71302940:A:C	rs12374070	A	C	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	71579134	71579135	chr3:71579135:A:C	rs76929866	A	C	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	71654604	71654605	chr3:71654605:T:C	rs704270	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	9.551601409090008	6.9447815192413165	TCTAATTAAA
chr3	71869279	71869280	chr3:71869280:T:C	rs10865661	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr3	72260663	72260664	chr3:72260664:A:G	rs145566835	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr3	72351870	72351871	chr3:72351871:C:T	rs56388700	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	72655120	72655121	chr3:72655121:A:G	rs17740880	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	7.802937221462287	4.905842712125912	TCCAATTACC
chr3	73035124	73035125	chr3:73035125:T:A	rs75352225	T	A	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	73109101	73109102	chr3:73109102:C:T	rs60594044	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	73123299	73123300	chr3:73123300:A:G	rs2637766	A	G	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	73123304	73123305	chr3:73123305:T:A	rs2630622	T	A	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	73461421	73461422	chr3:73461422:C:A	rs13073724	C	A	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	73719368	73719369	chr3:73719369:G:A	rs4677337	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr3	73828080	73828081	chr3:73828081:T:A	rs144667330	T	A	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr3	73910819	73910820	chr3:73910820:T:C	rs1405389	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	74012028	74012029	chr3:74012029:A:G	rs62246410	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	74044863	74044864	chr3:74044864:A:T	rs35435117	A	T	A	Alx1.mouse_homeodomain_1	9	1	+	8.981982082767747	7.986674957005393	CCTAATTAAA
chr3	74080248	74080249	chr3:74080249:A:G	rs17012033	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	74260533	74260534	chr3:74260534:A:G	rs143107003	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	74673763	74673764	chr3:74673764:C:T	rs9874426	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	75863888	75863889	chr3:75863889:A:T	rs887545675	A	T	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	76702860	76702861	chr3:76702861:T:G	rs2608137	T	G	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	77151013	77151014	chr3:77151014:C:T	rs9864444	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.69757138156076	8.279462745990756	TCCAATTAAA
chr3	77586539	77586540	chr3:77586540:C:T	rs775739	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	78413311	78413312	chr3:78413312:T:A	rs115221487	T	A	t	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	78751371	78751372	chr3:78751372:A:T	rs1386431	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	78868132	78868133	chr3:78868133:C:T	rs331146	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	78979368	78979369	chr3:78979369:C:T	rs61586777	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	79139890	79139891	chr3:79139891:G:T	rs13325822	G	T	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	79139891	79139892	chr3:79139892:C:T	rs7613938	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	80368638	80368639	chr3:80368639:A:G	rs12635544	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	81161823	81161824	chr3:81161824:G:A	rs114803310	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.74067261241241	8.004057009958101	TTTAATTAGC
chr3	81162362	81162363	chr3:81162363:A:G	rs10865593	A	G	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	81278040	81278041	chr3:81278041:C:T	rs533949075	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	81338745	81338746	chr3:81338746:C:T	rs73856324	C	T	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	84968248	84968249	chr3:84968249:G:A	rs12485289	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	85052016	85052017	chr3:85052017:A:G	rs9837914	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	85089666	85089667	chr3:85089667:T:C	rs9883252	T	C	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	86216068	86216069	chr3:86216069:C:T	rs1512929	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	86866352	86866353	chr3:86866353:G:C	rs9713450	G	C	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	87090691	87090692	chr3:87090692:T:G	rs1436644	T	G	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	87202211	87202212	chr3:87202212:C:T	rs58547955	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	87202217	87202218	chr3:87202218:T:C	rs74791426	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	88060180	88060181	chr3:88060181:A:G	rs142988473	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	94374959	94374960	chr3:94374960:T:C	rs12493918	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr3	94734436	94734437	chr3:94734437:G:A	rs62271492	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	94734454	94734455	chr3:94734455:C:A	rs11706923	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.087347922669274	7.439169388758474	CCTAATTACC
chr3	94788226	94788227	chr3:94788227:A:G	rs555348408	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr3	95420703	95420704	chr3:95420704:C:G	rs494331	C	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	97818615	97818616	chr3:97818616:C:T	rs59810404	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	98190979	98190980	chr3:98190980:T:C	rs9883382	T	C	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	98191005	98191006	chr3:98191006:C:T	rs72927011	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	98726479	98726480	chr3:98726480:A:G	rs865474	A	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr3	98968025	98968026	chr3:98968026:C:T	rs982291	C	T	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	98968047	98968048	chr3:98968048:C:T	rs11922078	C	T	c	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	99020137	99020138	chr3:99020138:C:T	rs2470760	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr3	99286456	99286457	chr3:99286457:A:G	rs115082708	A	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	99869225	99869226	chr3:99869226:A:G	rs793503	A	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr3	100782853	100782854	chr3:100782854:C:T	rs80279554	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	100782861	100782862	chr3:100782862:G:A	rs12330704	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	100798060	100798061	chr3:100798061:T:C	rs73152416	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	8.422165645528107	7.852546319205846	TCTAATTAGT
chr3	101853888	101853889	chr3:101853889:T:G	rs74397788	T	G	T	Alx1.mouse_homeodomain_1	8	1	-	8.298017703190137	7.662075066399709	CCTAATTAAG
chr3	102266401	102266402	chr3:102266402:G:C	rs2086269	G	C	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	103125453	103125454	chr3:103125454:A:T	rs17176927	A	T	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	104031108	104031109	chr3:104031109:C:G	rs1179236	C	G	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	104897060	104897061	chr3:104897061:C:T	rs1436349	C	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	104992661	104992662	chr3:104992662:T:G	rs1020133555	T	G	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	105176702	105176703	chr3:105176703:A:G	rs62261258	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr3	105579534	105579535	chr3:105579535:C:T	rs13081408	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr3	105582292	105582293	chr3:105582293:G:A	rs9288812	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	105835735	105835736	chr3:105835736:T:G	rs7651784	T	G	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	105981420	105981421	chr3:105981421:T:C	rs2618336	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	106002785	106002786	chr3:106002786:T:C	rs67766174	T	C	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr3	106206399	106206400	chr3:106206400:T:C	rs181781089	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	106206428	106206429	chr3:106206429:T:C	rs12489296	T	C	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	106272508	106272509	chr3:106272509:A:G	rs10222671	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.69757138156076	8.1279520552385	TCCAATTAAA
chr3	106316174	106316175	chr3:106316175:T:A	rs4390964	T	A	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr3	106371293	106371294	chr3:106371294:G:A	rs76148837	G	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	106424032	106424033	chr3:106424033:T:G	rs4342128	T	G	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	107143531	107143532	chr3:107143532:A:C	rs1308488880	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	107207449	107207450	chr3:107207450:C:G	rs62391970	C	G	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	107303669	107303670	chr3:107303670:C:T	rs73194564	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	7.8208649373008745	7.084249334846565	GCTAATTAGC
chr3	107548058	107548059	chr3:107548059:G:A	rs667022	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	107705182	107705183	chr3:107705183:C:T	rs7619002	C	T	c	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr3	107978818	107978819	chr3:107978819:A:G	rs709494	A	G	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	107986456	107986457	chr3:107986457:C:T	rs28636524	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	108125169	108125170	chr3:108125170:T:C	rs11926884	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	108509897	108509898	chr3:108509898:T:C	rs13099836	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.087347922669274	5.190253413332897	CCTAATTACC
chr3	108511142	108511143	chr3:108511143:T:C	rs2603139	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.656967248991535	7.802937221462287	TCTAATTACC
chr3	108975192	108975193	chr3:108975193:G:A	rs2922138	G	A	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	109241833	109241834	chr3:109241834:T:A	rs899835767	T	A	.	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	110414484	110414485	chr3:110414485:C:T	rs2669100	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	111222014	111222015	chr3:111222015:G:A	rs6801425	G	A	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	111286271	111286272	chr3:111286272:T:C	rs1881675	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	111539285	111539286	chr3:111539286:C:T	rs73855140	C	T	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	111547308	111547309	chr3:111547309:T:A	rs112233506	T	A	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	112032356	112032357	chr3:112032357:C:T	rs73216046	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	112327416	112327417	chr3:112327417:C:A	rs939578	C	A	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr3	112817881	112817882	chr3:112817882:A:C	rs6784658	A	C	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	112979246	112979247	chr3:112979247:A:G	rs114495187	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	112992523	112992524	chr3:112992524:G:A	rs1488189	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	113233434	113233435	chr3:113233435:C:T	rs72942472	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	114379599	114379600	chr3:114379600:C:A	rs75992705	C	A	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	114510467	114510468	chr3:114510468:G:T	rs74816704	G	T	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	114792508	114792509	chr3:114792509:T:C	rs12490319	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	115580710	115580711	chr3:115580711:A:G	rs78743628	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr3	115945359	115945360	chr3:115945360:A:G	rs3884593	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.16388906539059	3.192209412369848	CCTAATTAGG
chr3	116689206	116689207	chr3:116689207:A:G	rs7634331	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	116817581	116817582	chr3:116817582:G:A	rs62266028	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	117202883	117202884	chr3:117202884:A:C	rs17698379	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	117474380	117474381	chr3:117474381:C:T	rs141933047	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	117760366	117760367	chr3:117760367:T:C	rs4687856	T	C	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	117794124	117794125	chr3:117794125:C:T	rs112053175	C	T	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	117815277	117815278	chr3:117815278:T:C	rs55718530	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr3	117857493	117857494	chr3:117857494:T:C	rs6438425	T	C	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	117920376	117920377	chr3:117920377:G:T	rs4688071	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	118229804	118229805	chr3:118229805:C:A	rs4428171	C	A	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	118293070	118293071	chr3:118293071:C:T	rs4687911	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	119234458	119234459	chr3:119234459:T:C	rs72955102	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	119457435	119457436	chr3:119457436:A:G	rs71325380	A	G	G	Alx1.mouse_homeodomain_1	5	1	-	8.346039445977318	3.358317529708337	CCTAATTACA
chr3	120312674	120312675	chr3:120312675:T:A	rs6808344	T	A	T	Alx1.mouse_homeodomain_1	9	1	-	7.49200941844807	6.4967022926857165	CCCAATTACA
chr3	120489484	120489485	chr3:120489485:C:T	rs1259321	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	120566823	120566824	chr3:120566824:G:A	rs147352879	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	120688540	120688541	chr3:120688541:G:A	rs144545746	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	120849002	120849003	chr3:120849003:T:G	rs4676831	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	7.869260531930455	3.7388478379999923	CCCAATTAAC
chr3	122294119	122294120	chr3:122294120:G:C	rs11720638	G	C	G	Alx1.mouse_homeodomain_1	8	1	+	7.886642584883163	7.384828585892281	TTCAATTAGC
chr3	122755457	122755458	chr3:122755458:C:A	rs6794019	C	A	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr3	122761076	122761077	chr3:122761077:G:C	rs146628865	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	122965068	122965069	chr3:122965069:A:C	rs4677871	A	C	C	Alx1.mouse_homeodomain_1	4	1	+	7.886642584883163	2.4248759341620088	TTCAATTAGC
chr3	123028914	123028915	chr3:123028915:G:C	rs78957109	G	C	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	123263429	123263430	chr3:123263430:A:G	chr3:123263430:A:G	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.087347922669274	5.480528032820583	CCTAATTACC
chr3	123733660	123733661	chr3:123733661:C:T	rs41302194	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	124125878	124125879	chr3:124125879:T:C	rs2204815	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	124273399	124273400	chr3:124273400:C:A	rs13100913	C	A	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	124415724	124415725	chr3:124415725:T:C	rs149627922	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	7.886642584883163	7.317023258560902	TTCAATTAGC
chr3	124423737	124423738	chr3:124423738:G:A	rs4274696	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr3	124486609	124486610	chr3:124486610:T:C	rs9812052	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.422165645528107	5.815345755679416	TCTAATTAGT
chr3	124530228	124530229	chr3:124530229:T:C	rs16835554	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	124831698	124831699	chr3:124831699:G:A	rs17236654	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	124831732	124831733	chr3:124831733:C:T	rs114045708	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr3	124871667	124871668	chr3:124871668:A:T	rs1270666	A	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	125056089	125056090	chr3:125056090:C:T	rs1000300286	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	125056092	125056093	chr3:125056093:C:A	chr3:125056093:C:A	C	A	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	125056121	125056122	chr3:125056122:G:T	rs551779321	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	125121656	125121657	chr3:125121657:A:G	rs570253	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr3	126112955	126112956	chr3:126112956:C:T	rs79298645	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	126412280	126412281	chr3:126412281:T:A	rs6781078	T	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	126412285	126412286	chr3:126412286:C:T	rs13092500	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	126563948	126563949	chr3:126563949:C:T	rs67961034	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.656967248991535	7.920351646537226	TCTAATTACC
chr3	127139042	127139043	chr3:127139043:A:G	rs552064577	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	127159687	127159688	chr3:127159688:G:A	rs77043207	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	127700381	127700382	chr3:127700382:T:C	rs2171131	T	C	T	Alx1.mouse_homeodomain_1	1	1	+	8.305181923889696	8.723290559459702	CTTAATTAAC
chr3	127783848	127783849	chr3:127783849:C:T	rs56259630	C	T	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr3	128409410	128409411	chr3:128409411:A:G	rs3828417	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	129534816	129534817	chr3:129534817:G:A	rs3733148	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	130423566	130423567	chr3:130423567:G:A	rs35665175	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	8.304751220453168	8.438879858252715	TCCAATTAGC
chr3	130579192	130579193	chr3:130579193:G:T	rs115938256	G	T	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	130936159	130936160	chr3:130936160:A:C	rs72628528	A	C	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	132031999	132032000	chr3:132032000:G:A	rs9857204	G	A	g	Alx1.mouse_homeodomain_1	1	1	-	9.551601409090008	9.133492773520002	TCTAATTAAA
chr3	132134579	132134580	chr3:132134580:T:C	rs9681094	T	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	132254973	132254974	chr3:132254974:G:T	rs116008416	G	T	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr3	132787862	132787863	chr3:132787863:G:T	rs935899	G	T	T	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	9.417472771290461	TCTAATTAGC
chr3	133034382	133034383	chr3:133034383:G:A	rs113891660	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	133368467	133368468	chr3:133368468:C:G	rs869751	C	G	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	134156336	134156337	chr3:134156337:G:A	rs12494042	G	A	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	134391577	134391578	chr3:134391578:G:T	rs56131699	G	T	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr3	134457848	134457849	chr3:134457849:T:A	rs1022577736	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	7.8208649373008745	2.3968831400845185	GCTAATTAGC
chr3	135047455	135047456	chr3:135047456:G:A	rs36041	G	A	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	135047458	135047459	chr3:135047459:C:T	rs577065701	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr3	135629748	135629749	chr3:135629749:A:G	rs16843219	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	135922915	135922916	chr3:135922916:T:C	rs116243303	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	136838938	136838939	chr3:136838939:T:A	rs182997372	T	A	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	136858562	136858563	chr3:136858563:C:A	rs114581816	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	7.940983387749356	6.347671461581572	ACTAATTAGC
chr3	137194790	137194791	chr3:137194791:T:C	rs4678227	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	138011213	138011214	chr3:138011214:T:G	rs62280602	T	G	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr3	138975417	138975418	chr3:138975418:C:T	rs1871993	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.304751220453168	7.568135617998859	TCCAATTAGC
chr3	139759131	139759132	chr3:139759132:A:G	rs4082117	A	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	139981690	139981691	chr3:139981691:C:T	rs9830596	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	140219363	140219364	chr3:140219364:G:A	rs140688636	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	140759122	140759123	chr3:140759123:C:T	rs76061397	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	140917947	140917948	chr3:140917948:A:G	rs7650615	A	G	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	141336998	141336999	chr3:141336999:G:A	rs13434224	G	A	A	Alx1.mouse_homeodomain_1	9	1	+	8.23169439272197	8.91565877229958	TCTAATTACG
chr3	141630084	141630085	chr3:141630085:C:T	rs73238098	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr3	141873047	141873048	chr3:141873048:A:C	rs73228317	A	C	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr3	142353810	142353811	chr3:142353811:A:C	rs12632726	A	C	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	142589227	142589228	chr3:142589228:G:A	rs9846960	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	7.735131894130908	8.304751220453168	CCCAATTAGC
chr3	142912827	142912828	chr3:142912828:T:C	rs73866232	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	8.867637029512398	8.733508391712851	TCTAATTAAG
chr3	143172062	143172063	chr3:143172063:A:G	rs73159656	A	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr3	143511427	143511428	chr3:143511428:C:T	rs114079075	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	143537570	143537571	chr3:143537571:T:C	rs16853772	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	143551990	143551991	chr3:143551991:C:T	rs72999747	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	143805092	143805093	chr3:143805093:A:G	rs11919894	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr3	144033191	144033192	chr3:144033192:T:G	rs7639366	T	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	144161568	144161569	chr3:144161569:A:C	rs7615096	A	C	C	Alx1.mouse_homeodomain_1	6	1	-	8.981982082767747	4.16684968988381	CCTAATTAAA
chr3	144319117	144319118	chr3:144319118:G:T	rs183838	G	T	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	146164101	146164102	chr3:146164102:G:A	rs35479343	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	146511326	146511327	chr3:146511327:T:C	rs113471420	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	9.292909885781963	4.305187969512981	TCTAATTAAC
chr3	146628859	146628860	chr3:146628860:T:G	rs17434603	T	G	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	148244063	148244064	chr3:148244064:A:T	rs4496445	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	7.309859037861343	4.078082090532081	CCCAATTAGG
chr3	148830059	148830060	chr3:148830060:G:A	rs76192458	G	A	g	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	148884668	148884669	chr3:148884669:C:T	rs3772578	C	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	149232210	149232211	chr3:149232211:A:G	rs76906254	A	G	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	149338585	149338586	chr3:149338586:C:T	rs9869932	C	T	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	149603555	149603556	chr3:149603556:C:T	rs111737492	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	150371697	150371698	chr3:150371698:C:T	rs78213229	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	8.91565877229958	8.570744477099081	TCTAATTACA
chr3	151287025	151287026	chr3:151287026:A:C	rs7617677	A	C	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	151818666	151818667	chr3:151818667:A:G	rs2139566	A	G	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	152061076	152061077	chr3:152061077:A:G	rs842509	A	G	a	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	152292352	152292353	chr3:152292353:A:G	rs76360965	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	152470500	152470501	chr3:152470501:A:G	rs4622883	A	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	152713578	152713579	chr3:152713579:G:T	rs1850424	G	T	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr3	152720727	152720728	chr3:152720728:C:T	rs1461165	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	152957919	152957920	chr3:152957920:A:T	rs9289883	A	T	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr3	152986624	152986625	chr3:152986625:G:A	rs563529782	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr3	152986629	152986630	chr3:152986630:G:A	rs12495973	G	A	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	153003576	153003577	chr3:153003577:C:T	rs55899551	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr3	153026185	153026186	chr3:153026186:A:G	rs116508159	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	153927191	153927192	chr3:153927192:G:A	rs115219018	G	A	g	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	155227124	155227125	chr3:155227125:A:G	rs73875868	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	155245832	155245833	chr3:155245833:A:G	rs1485241	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr3	155323080	155323081	chr3:155323081:A:G	rs79013957	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	9.551601409090008	8.69757138156076	TCTAATTAAA
chr3	155500252	155500253	chr3:155500253:T:G	rs12107115	T	G	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	155572412	155572413	chr3:155572413:T:C	rs144388406	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	155703018	155703019	chr3:155703019:A:C	rs358707	A	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	155855087	155855088	chr3:155855088:T:C	rs770419334	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.91565877229958	8.346039445977318	TCTAATTACA
chr3	155855111	155855112	chr3:155855112:A:T	rs149751692	A	T	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	155889437	155889438	chr3:155889438:C:T	rs62286833	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr3	156630632	156630633	chr3:156630633:G:A	rs2292336	G	A	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	156710037	156710038	chr3:156710038:C:T	rs1469536	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	156812504	156812505	chr3:156812505:T:C	rs62278062	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	157110732	157110733	chr3:157110733:G:C	rs150353646	G	C	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr3	157110733	157110734	chr3:157110734:G:A	chr3:157110734:G:A	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr3	157176306	157176307	chr3:157176307:A:G	rs13091531	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr3	157417489	157417490	chr3:157417490:C:T	rs75885334	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	157856286	157856287	chr3:157856287:A:G	rs7644647	A	G	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr3	157930240	157930241	chr3:157930241:A:G	rs11712397	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	158459792	158459793	chr3:158459793:A:G	rs12631675	A	G	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr3	158907315	158907316	chr3:158907316:T:C	rs12492743	T	C	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr3	160343356	160343357	chr3:160343357:G:A	rs6441314	G	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr3	160437182	160437183	chr3:160437183:T:C	rs73154602	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	160931689	160931690	chr3:160931690:A:G	rs114158469	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	161275075	161275076	chr3:161275076:C:T	rs34016896	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	162201584	162201585	chr3:162201585:A:G	rs9844455	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr3	162394331	162394332	chr3:162394332:T:C	rs6800943	T	C	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	162438728	162438729	chr3:162438729:A:C	rs2318630	A	C	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	162712021	162712022	chr3:162712022:T:C	rs9844124	T	C	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	162720742	162720743	chr3:162720743:G:A	rs56815734	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr3	162921141	162921142	chr3:162921142:A:T	rs150212	A	T	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	164395396	164395397	chr3:164395397:T:C	rs62283212	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	165885754	165885755	chr3:165885755:T:C	rs4487282	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	166291835	166291836	chr3:166291836:C:T	rs74340430	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr3	167481654	167481655	chr3:167481655:T:C	rs13063641	T	C	-	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	168220099	168220100	chr3:168220100:G:T	rs7624807	G	T	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	168645115	168645116	chr3:168645116:A:G	rs11712578	A	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr3	169339868	169339869	chr3:169339869:G:A	rs2106123	G	A	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	169442513	169442514	chr3:169442514:T:A	rs16853750	T	A	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	170349260	170349261	chr3:170349261:C:G	rs9841852	C	G	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr3	170349271	170349272	chr3:170349272:A:G	rs59152719	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	9.292909885781963	8.438879858252715	TCTAATTAAC
chr3	170723188	170723189	chr3:170723189:T:C	rs13092552	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	170754717	170754718	chr3:170754718:G:A	rs578161	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr3	170977921	170977922	chr3:170977922:G:T	rs7635100	G	T	T	Alx1.mouse_homeodomain_1	1	1	-	7.869260531930455	6.275948605762671	CCCAATTAAC
chr3	171045095	171045096	chr3:171045096:G:T	rs77412276	G	T	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr3	171363352	171363353	chr3:171363353:A:T	rs2422225	A	T	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	171387069	171387070	chr3:171387070:G:A	rs12634652	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	171951024	171951025	chr3:171951025:C:A	rs66733222	C	A	c	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	172126867	172126868	chr3:172126868:C:T	rs4894809	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	172274218	172274219	chr3:172274219:T:C	rs6445054	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.061628744770331	3.0899490917495904	TCCAATTACA
chr3	172274227	172274228	chr3:172274228:G:A	rs143390888	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	172320668	172320669	chr3:172320669:A:C	rs79630218	A	C	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr3	172465418	172465419	chr3:172465419:G:A	rs147210356	G	A	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	172796503	172796504	chr3:172796504:G:A	rs10804849	G	A	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	172824482	172824483	chr3:172824483:A:G	rs12630930	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	172841065	172841066	chr3:172841066:C:T	rs144899073	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr3	173602094	173602095	chr3:173602095:G:A	rs35932697	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	173745425	173745426	chr3:173745426:A:G	rs76868467	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr3	174248979	174248980	chr3:174248980:C:T	rs13088391	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	174306776	174306777	chr3:174306777:T:C	rs11713307	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.312052953791037	3.3403733007702945	TCTAATTATC
chr3	174343401	174343402	chr3:174343402:T:C	rs140733429	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	175057643	175057644	chr3:175057644:A:G	rs4349508	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	175095907	175095908	chr3:175095908:C:T	rs114593803	C	T	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	175095921	175095922	chr3:175095922:T:A	rs145042617	T	A	T	Alx1.mouse_homeodomain_1	4	1	-	7.9549935751004215	2.880225028362516	GCTAATTAAC
chr3	175151457	175151458	chr3:175151458:G:C	rs936479	G	C	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	175151468	175151469	chr3:175151469:G:C	rs936478	G	C	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	176562899	176562900	chr3:176562900:A:G	rs13326622	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	176712687	176712688	chr3:176712688:C:G	rs12494273	C	G	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	177206702	177206703	chr3:177206703:A:G	rs75207153	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr3	177431965	177431966	chr3:177431966:C:T	rs1418227209	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	177466339	177466340	chr3:177466340:A:G	rs561752458	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.91565877229958	2.9887547851395153	TCTAATTACA
chr3	177692599	177692600	chr3:177692600:G:T	rs12631987	G	T	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	178387764	178387765	chr3:178387765:A:G	rs558938729	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	178387765	178387766	chr3:178387766:C:G	rs7639490	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	178396099	178396100	chr3:178396100:G:C	rs1837865	G	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	178678054	178678055	chr3:178678055:C:T	rs6443560	C	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	178785984	178785985	chr3:178785985:G:A	rs4423745	G	A	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	178827224	178827225	chr3:178827225:C:A	rs9882015	C	A	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	179931722	179931723	chr3:179931723:C:T	rs17748864	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.869260531930455	8.438879858252715	CCCAATTAAC
chr3	181056639	181056640	chr3:181056640:G:A	rs1805645	G	A	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	181920461	181920462	chr3:181920462:A:G	rs4855056	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr3	182327157	182327158	chr3:182327158:G:A	rs73884196	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	183014141	183014142	chr3:183014142:C:T	rs1547910	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	183564479	183564480	chr3:183564480:G:A	rs4859124	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	184489872	184489873	chr3:184489873:A:G	rs9834243	A	G	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	184544089	184544090	chr3:184544090:G:A	rs540529123	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr3	184595722	184595723	chr3:184595723:C:T	rs7623495	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr3	184642787	184642788	chr3:184642788:C:T	rs151186915	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	184652173	184652174	chr3:184652174:A:G	rs59703696	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.886642584883163	2.914962931862422	TTCAATTAGC
chr3	184717742	184717743	chr3:184717743:A:G	rs151303785	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr3	185724665	185724666	chr3:185724666:C:T	rs6781019	C	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	186831365	186831366	chr3:186831366:C:G	rs10937272	C	G	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr3	186875331	186875332	chr3:186875332:A:G	rs2889825	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	186922877	186922878	chr3:186922878:G:A	rs76909280	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	186944803	186944804	chr3:186944804:T:G	rs13060992	T	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	186983003	186983004	chr3:186983004:A:C	rs13097481	A	C	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	187066441	187066442	chr3:187066442:C:T	rs12054151	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr3	187566888	187566889	chr3:187566889:C:T	rs139224997	C	T	c	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	187750665	187750666	chr3:187750666:C:A	rs112939116	C	A	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	188157367	188157368	chr3:188157368:G:T	rs62289745	G	T	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr3	188494120	188494121	chr3:188494121:C:G	rs60069152	C	G	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr3	189142854	189142855	chr3:189142855:C:T	rs75980245	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	189467967	189467968	chr3:189467968:G:T	rs185465	G	T	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr3	189941391	189941392	chr3:189941392:T:C	rs698109	T	C	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	190741735	190741736	chr3:190741736:C:A	rs113656506	C	A	c	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr3	191331813	191331814	chr3:191331814:A:C	rs187820974	A	C	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	191696341	191696342	chr3:191696342:G:C	rs963136221	G	C	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	191809334	191809335	chr3:191809335:C:T	rs1017983630	C	T	c	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.147095123247572	CCCAATTACA
chr3	192055069	192055070	chr3:192055070:A:G	rs568385900	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.233317895140026	2.2616382421192847	CCCAATTACC
chr3	192876358	192876359	chr3:192876359:T:C	rs7648594	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	192920996	192920997	chr3:192920997:G:A	rs937587	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	192930344	192930345	chr3:192930345:C:T	chr3:192930345:C:T	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	193133409	193133410	chr3:193133410:G:T	rs138766286	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.312052953791037	8.570744477099081	TCTAATTATC
chr3	193133418	193133419	chr3:193133419:A:G	rs79362007	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.312052953791037	7.742433627468776	TCTAATTATC
chr3	193511078	193511079	chr3:193511079:C:T	rs9283663	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr3	193772217	193772218	chr3:193772218:T:C	rs6444745	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	193895450	193895451	chr3:193895451:C:T	rs73890903	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr3	193960996	193960997	chr3:193960997:C:A	rs923342408	C	A	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	194212922	194212923	chr3:194212923:G:A	rs9842495	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr3	194685701	194685702	chr3:194685702:A:C	rs810965	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	8.061628744770331	6.723712434088789	TCCAATTACA
chr3	194757995	194757996	chr3:194757996:G:A	rs111274024	G	A	A	Alx1.mouse_homeodomain_1	1	1	-	8.981982082767747	8.563873447197741	CCTAATTAAA
chr3	194853771	194853772	chr3:194853772:C:T	rs141590345	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	194942273	194942274	chr3:194942274:A:G	rs4467383	A	G	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr3	194942281	194942282	chr3:194942282:A:C	rs62291479	A	C	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr3	195101275	195101276	chr3:195101276:T:A	rs111533260	T	A	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr3	195250288	195250289	chr3:195250289:G:A	rs148589948	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr3	195274024	195274025	chr3:195274025:G:A	rs13072883	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	195587960	195587961	chr3:195587961:A:T	rs75503960	A	T	T	Alx1.mouse_homeodomain_1	7	1	+	8.8478534449682	6.129858422760944	CCTAATTAGA
chr3	195683126	195683127	chr3:195683127:G:A	rs28541720	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	195698673	195698674	chr3:195698674:A:G	rs376072843	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	195908298	195908299	chr3:195908299:A:G	rs954501404	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr3	195911983	195911984	chr3:195911984:C:T	rs73208009	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	196015696	196015697	chr3:196015697:G:A	rs113988418	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	196057320	196057321	chr3:196057321:G:A	rs492349	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr3	196555276	196555277	chr3:196555277:G:A	rs114401754	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr3	197227824	197227825	chr3:197227825:T:C	rs79678298	T	C	t	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	197840789	197840790	chr3:197840790:A:G	rs6792006	A	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr3	197848489	197848490	chr3:197848490:T:C	rs9325407	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr3	198029089	198029090	chr3:198029090:C:T	rs6802214	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	51199	51200	chr4:51200:C:T	rs10434453	C	T	c	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr4	1163632	1163633	chr4:1163633:C:G	rs59465697	C	G	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	1581544	1581545	chr4:1581545:A:G	rs74347502	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	3.022143764418211	CCCAATTAGA
chr4	2212091	2212092	chr4:2212092:A:G	rs6810591	A	G	a	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr4	2237306	2237307	chr4:2237307:G:A	rs144345530	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	2307637	2307638	chr4:2307638:G:A	rs11248096	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	2352702	2352703	chr4:2352703:C:T	rs576901700	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr4	2383456	2383457	chr4:2383457:C:T	rs2354518	C	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	2383459	2383460	chr4:2383460:G:A	rs28629776	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	2758205	2758206	chr4:2758206:G:A	rs184186456	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr4	3846795	3846796	chr4:3846796:G:C	rs4131255	G	C	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	4237194	4237195	chr4:4237195:A:G	rs12498280	A	G	G	Alx1.mouse_homeodomain_1	7	1	+	7.309859037861343	1.3829550507012782	CCCAATTAGG
chr4	4671913	4671914	chr4:4671914:T:C	rs7690154	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	4849373	4849374	chr4:4849374:T:C	rs6446691	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr4	4909914	4909915	chr4:4909915:A:G	rs6446700	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	8.01360700198315	3.041927348962409	TCCAATTAAG
chr4	5024195	5024196	chr4:5024196:G:C	rs10937616	G	C	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr4	5156708	5156709	chr4:5156709:G:A	rs1542203	G	A	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr4	5165604	5165605	chr4:5165605:C:G	rs3806726	C	G	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	5422081	5422082	chr4:5422082:G:C	rs187403810	G	C	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	5463276	5463277	chr4:5463277:G:A	rs17464616	G	A	A	Alx1.mouse_homeodomain_1	8	1	+	8.589161921660155	8.723290559459702	CCTAATTAGC
chr4	5503655	5503656	chr4:5503656:C:T	rs16837357	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.74067261241241	8.004057009958101	TTTAATTAGC
chr4	5859942	5859943	chr4:5859943:A:C	rs3889568	A	C	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	6057004	6057005	chr4:6057005:C:T	rs7438838	C	T	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	6403098	6403099	chr4:6403099:G:A	rs13113183	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	6410327	6410328	chr4:6410328:C:T	rs116027540	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr4	6720204	6720205	chr4:6720205:A:T	rs138200378	A	T	a	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	6.4154977513127465	TTTAATTAAA
chr4	7072498	7072499	chr4:7072499:T:C	rs6825954	T	C	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr4	7380815	7380816	chr4:7380816:T:G	rs7681193	T	G	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	7588377	7588378	chr4:7588378:G:C	rs17367999	G	C	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr4	7655419	7655420	chr4:7655420:G:C	rs62290676	G	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	7655444	7655445	chr4:7655445:T:A	rs28643428	T	A	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr4	8123551	8123552	chr4:8123552:G:A	rs535281885	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	8366705	8366706	chr4:8366706:G:A	rs7809	G	A	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr4	8590059	8590060	chr4:8590060:C:T	rs7683057	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	8887344	8887345	chr4:8887345:G:A	rs4956765	G	A	a	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	11533010	11533011	chr4:11533011:G:A	rs10029570	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	11533054	11533055	chr4:11533055:C:T	rs560752560	C	T	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	14367451	14367452	chr4:14367452:C:T	rs6449020	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr4	15006601	15006602	chr4:15006602:A:G	rs2702523	A	G	G	Alx1.mouse_homeodomain_1	2	1	-	7.9549935751004215	7.100963547571173	GCTAATTAAC
chr4	15234885	15234886	chr4:15234886:C:T	rs527908901	C	T	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	15234900	15234901	chr4:15234901:A:G	rs148526468	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.304751220453168	3.3330715674324276	TCCAATTAGC
chr4	15255595	15255596	chr4:15255596:A:G	rs34588884	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	15776257	15776258	chr4:15776258:C:T	rs6449180	C	T	T	Alx1.mouse_homeodomain_1	2	1	+	8.69757138156076	9.551601409090008	TCCAATTAAA
chr4	15990862	15990863	chr4:15990863:C:T	rs2058147	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr4	16032965	16032966	chr4:16032966:C:T	rs10939649	C	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr4	17135660	17135661	chr4:17135661:C:A	rs629542	C	A	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr4	17287274	17287275	chr4:17287275:T:G	rs74524600	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.563442743761213	3.7483103508772766	TCCAATTAGA
chr4	17641313	17641314	chr4:17641314:T:A	rs55939327	T	A	T	Alx1.mouse_homeodomain_1	3	1	-	8.17105328609015	4.443572012398541	CTTAATTAGC
chr4	18636397	18636398	chr4:18636398:C:T	rs2320979	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	18839043	18839044	chr4:18839044:G:A	rs28409998	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	18851121	18851122	chr4:18851122:A:G	rs16897709	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	19413288	19413289	chr4:19413289:A:C	rs61194969	A	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr4	19465294	19465295	chr4:19465295:C:G	rs4235335	C	G	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	20397374	20397375	chr4:20397375:A:G	rs79480174	A	G	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	20758260	20758261	chr4:20758261:G:A	rs12509329	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	20856819	20856820	chr4:20856820:A:T	rs28363924	A	T	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	21206079	21206080	chr4:21206080:A:G	rs143807565	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr4	21248428	21248429	chr4:21248429:C:T	rs111897191	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr4	21248436	21248437	chr4:21248437:T:C	rs2162081	T	C	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr4	22042111	22042112	chr4:22042112:G:A	rs7656794	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	24001858	24001859	chr4:24001859:C:G	rs12498250	C	G	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	24471515	24471516	chr4:24471516:A:C	rs116434956	A	C	a	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	24607320	24607321	chr4:24607321:A:C	rs4600902	A	C	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	24908812	24908813	chr4:24908813:T:G	rs35897466	T	G	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	24922267	24922268	chr4:24922268:C:T	rs73250628	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	24999528	24999529	chr4:24999529:G:A	rs6448322	G	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	25427209	25427210	chr4:25427210:A:G	rs58578313	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	25710924	25710925	chr4:25710925:C:G	rs9762388	C	G	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	25913879	25913880	chr4:25913880:G:A	rs187620284	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	26323456	26323457	chr4:26323457:T:C	rs1358512609	T	C	T	Alx1.mouse_homeodomain_1	1	1	+	9.133492773520002	9.551601409090008	TTTAATTAAA
chr4	27233553	27233554	chr4:27233554:T:G	rs34387663	T	G	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	27861417	27861418	chr4:27861418:T:G	rs55913362	T	G	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	27924722	27924723	chr4:27924723:C:A	rs61793891	C	A	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	28144085	28144086	chr4:28144086:A:G	rs988922946	A	G	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	28463306	28463307	chr4:28463307:A:G	rs79926006	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	29277469	29277470	chr4:29277470:C:A	rs1821692	C	A	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	30576552	30576553	chr4:30576553:G:A	rs13131444	G	A	g	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	30808798	30808799	chr4:30808799:T:C	rs1348923	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	31311729	31311730	chr4:31311730:C:T	rs4566619	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr4	32796880	32796881	chr4:32796881:C:T	rs4499737	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr4	32987167	32987168	chr4:32987168:C:A	rs67805024	C	A	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	33176721	33176722	chr4:33176722:T:C	rs74408298	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	35520574	35520575	chr4:35520575:A:G	rs4859306	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	35552356	35552357	chr4:35552357:C:A	rs78586305	C	A	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	36269849	36269850	chr4:36269850:A:G	rs10004010	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	36336720	36336721	chr4:36336721:T:C	rs905823228	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	36740905	36740906	chr4:36740906:C:T	rs12503561	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	37268700	37268701	chr4:37268701:T:A	rs4832891	T	A	T	Alx1.mouse_homeodomain_1	4	1	-	8.312052953791037	3.2372844070531315	TCTAATTATC
chr4	37531393	37531394	chr4:37531394:A:G	rs7683012	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	37615352	37615353	chr4:37615353:C:T	rs62297175	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	37718957	37718958	chr4:37718958:T:C	rs12505604	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	9.292909885781963	9.158781247982416	TCTAATTAAC
chr4	37953048	37953049	chr4:37953049:T:C	rs9306953	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.802937221462287	2.8312575684415457	TCCAATTACC
chr4	38010099	38010100	chr4:38010100:G:A	rs62298553	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	8.061628744770331	8.91565877229958	TCCAATTACA
chr4	38230013	38230014	chr4:38230014:T:G	rs2055889	T	G	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr4	38242646	38242647	chr4:38242647:C:T	rs56020145	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	38304611	38304612	chr4:38304612:A:G	rs745028	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	38328394	38328395	chr4:38328395:G:A	rs73243350	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr4	38364768	38364769	chr4:38364769:A:G	rs10213458	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	38383845	38383846	chr4:38383846:G:A	rs74832629	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	38383857	38383858	chr4:38383858:G:A	rs17499404	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	38564174	38564175	chr4:38564175:G:A	chr4:38564175:G:A	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	38872095	38872096	chr4:38872096:T:C	rs1472718	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	38873911	38873912	chr4:38873912:C:T	rs140570645	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	38985862	38985863	chr4:38985863:T:C	rs147961387	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	9.417472771290461	6.520378261954085	TCTAATTAGA
chr4	39630393	39630394	chr4:39630394:C:T	rs4327496	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	39640311	39640312	chr4:39640312:G:T	rs1484321	G	T	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	40195862	40195863	chr4:40195863:G:A	rs75541047	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	40573021	40573022	chr4:40573022:A:G	rs10023819	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr4	41319904	41319905	chr4:41319905:G:T	rs1178426788	G	T	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	41480999	41481000	chr4:41481000:A:G	rs1034149159	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	41551183	41551184	chr4:41551184:C:G	rs7684309	C	G	G	Alx1.mouse_homeodomain_1	8	1	-	8.8478534449682	8.346039445977318	CCTAATTAGA
chr4	41776832	41776833	chr4:41776833:G:A	rs4861143	G	A	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr4	42304849	42304850	chr4:42304850:G:A	rs113137264	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr4	42515193	42515194	chr4:42515194:T:C	rs4526008	T	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr4	43316003	43316004	chr4:43316004:G:C	rs10213487	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr4	43316006	43316007	chr4:43316007:T:C	rs10213301	T	C	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr4	44536176	44536177	chr4:44536177:C:G	rs62304924	C	G	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	44861545	44861546	chr4:44861546:G:A	rs13138300	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	44926443	44926444	chr4:44926444:A:G	rs13127633	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.91565877229958	8.061628744770331	TCTAATTACA
chr4	44978024	44978025	chr4:44978025:C:T	rs55637509	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr4	45013665	45013666	chr4:45013666:T:C	rs73143234	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	45581659	45581660	chr4:45581660:C:G	rs1598655	C	G	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr4	47825352	47825353	chr4:47825353:C:T	rs6819172	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	48341025	48341026	chr4:48341026:T:C	rs66671150	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr4	48898967	48898968	chr4:48898968:T:C	rs11737706	T	C	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	49512298	49512299	chr4:49512299:C:G	rs7377925	C	G	.	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr4	53764071	53764072	chr4:53764072:T:A	rs7676596	T	A	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	53986198	53986199	chr4:53986199:C:T	rs77757018	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	54215990	54215991	chr4:54215991:G:A	rs11133315	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	54275125	54275126	chr4:54275126:G:A	rs2307050	G	A	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr4	54495224	54495225	chr4:54495225:G:A	rs1157106	G	A	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	54783831	54783832	chr4:54783832:A:T	rs2646345	A	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	55116616	55116617	chr4:55116617:T:C	rs34945396	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr4	55133017	55133018	chr4:55133018:G:A	rs17711225	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	55348428	55348429	chr4:55348429:A:G	rs9790808	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	55348444	55348445	chr4:55348445:A:G	rs7692806	A	G	G	Alx1.mouse_homeodomain_1	5	1	-	8.312052953791037	3.3243310375220547	TCTAATTATC
chr4	55386777	55386778	chr4:55386778:G:A	rs62305201	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.1279520552385	8.69757138156076	CCCAATTAAA
chr4	55394064	55394065	chr4:55394065:T:C	rs116037544	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr4	55476158	55476159	chr4:55476159:G:A	rs9312661	G	A	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	55925591	55925592	chr4:55925592:G:A	rs73238402	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	56756070	56756071	chr4:56756071:A:G	rs7679018	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	56756085	56756086	chr4:56756086:C:T	rs932518774	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.993823417438953	7.575714781868947	CCCAATTAGA
chr4	56758742	56758743	chr4:56758743:T:G	rs1564400	T	G	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	56872324	56872325	chr4:56872325:G:T	rs62308111	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	7.940983387749356	8.199674911057402	ACTAATTAGC
chr4	56971616	56971617	chr4:56971617:C:T	rs17087332	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	57438229	57438230	chr4:57438230:G:A	rs4242011	G	A	A	Alx1.mouse_homeodomain_1	8	1	+	8.74067261241241	8.874801250211958	TTTAATTAGC
chr4	57795874	57795875	chr4:57795875:T:G	rs10034684	T	G	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	58161466	58161467	chr4:58161467:A:C	rs7680051	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	9.133492773520002	8.497550136729574	TTTAATTAAA
chr4	58765132	58765133	chr4:58765133:A:G	rs9312708	A	G	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	58815486	58815487	chr4:58815487:T:C	rs17051501	T	C	t	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	59092034	59092035	chr4:59092035:T:C	rs2132343	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	7.735131894130908	4.838037384794533	CCCAATTAGC
chr4	59177023	59177024	chr4:59177024:C:T	rs12715701	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	60683233	60683234	chr4:60683234:C:T	rs75041234	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.563442743761213	9.417472771290461	TCCAATTAGA
chr4	61128606	61128607	chr4:61128607:C:T	rs981449623	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	61493600	61493601	chr4:61493601:C:T	rs10016690	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	63057053	63057054	chr4:63057054:T:C	rs2346591	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	8.17105328609015	5.56423339624146	CTTAATTAGC
chr4	63502102	63502103	chr4:63502103:C:G	rs11131467	C	G	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr4	63729398	63729399	chr4:63729399:A:T	rs79518281	A	T	T	Alx1.mouse_homeodomain_1	2	1	-	8.312052953791037	6.219209050481798	TCTAATTATC
chr4	64727633	64727634	chr4:64727634:G:A	rs72643277	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr4	65023177	65023178	chr4:65023178:A:G	rs11947449	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	65253777	65253778	chr4:65253778:C:T	rs54808	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr4	65585153	65585154	chr4:65585154:A:G	rs11131602	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	65853329	65853330	chr4:65853330:C:T	rs17756441	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	66061779	66061780	chr4:66061780:A:G	rs6839520	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	66273315	66273316	chr4:66273316:T:A	rs13107026	T	A	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr4	66693353	66693354	chr4:66693354:T:A	rs72892219	T	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	67334097	67334098	chr4:67334098:T:C	rs9312176	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	67935031	67935032	chr4:67935032:G:A	rs57346291	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	70311745	70311746	chr4:70311746:G:A	rs17148592	G	A	-	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	70338887	70338888	chr4:70338888:C:G	rs1351420	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	70778941	70778942	chr4:70778942:A:G	rs143375244	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	3.022143764418211	CCCAATTAGA
chr4	70783613	70783614	chr4:70783614:T:C	rs114362401	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	71526178	71526179	chr4:71526179:A:C	rs4146676	A	C	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	71584471	71584472	chr4:71584472:G:A	rs4694404	G	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr4	73660878	73660879	chr4:73660879:T:C	rs7666794	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	73732237	73732238	chr4:73732238:T:C	rs114532691	T	C	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	73860571	73860572	chr4:73860572:C:T	rs10938103	C	T	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	74367835	74367836	chr4:74367836:C:G	rs72654895	C	G	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr4	74518126	74518127	chr4:74518127:T:C	rs74875655	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr4	74544657	74544658	chr4:74544658:G:A	rs6414653	G	A	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	75073751	75073752	chr4:75073752:C:T	rs17000203	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr4	76040901	76040902	chr4:76040902:G:A	rs4241581	G	A	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	76060158	76060159	chr4:76060159:A:C	rs4432767	A	C	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr4	76585862	76585863	chr4:76585863:A:G	chr4:76585863:A:G	A	G	a	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	76585886	76585887	chr4:76585887:G:A	rs1034601589	G	A	g	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr4	76984985	76984986	chr4:76984986:C:T	rs734655	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	77391148	77391149	chr4:77391149:A:T	rs72648584	A	T	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr4	77582808	77582809	chr4:77582809:T:C	rs355684	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	77735106	77735107	chr4:77735107:C:T	rs78860381	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	78008131	78008132	chr4:78008132:C:T	rs28414707	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	78047643	78047644	chr4:78047644:G:T	rs1502877	G	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	78160311	78160312	chr4:78160312:T:C	rs9307352	T	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr4	78187343	78187344	chr4:78187344:C:T	rs11098084	C	T	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	78374410	78374411	chr4:78374411:G:A	rs116432230	G	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr4	78438483	78438484	chr4:78438484:G:C	rs17003218	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr4	78481347	78481348	chr4:78481348:T:A	rs6817408	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	79445617	79445618	chr4:79445618:C:T	rs114369353	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	80005846	80005847	chr4:80005847:C:T	rs12504282	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	80021208	80021209	chr4:80021209:C:T	rs12641356	C	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	80991610	80991611	chr4:80991611:G:C	rs28416900	G	C	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	81050086	81050087	chr4:81050087:A:G	rs9307778	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr4	81292453	81292454	chr4:81292454:C:G	rs12504458	C	G	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr4	81406123	81406124	chr4:81406124:G:A	rs929023237	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr4	81406124	81406125	chr4:81406125:C:T	rs192988458	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	81461918	81461919	chr4:81461919:G:C	rs6535251	G	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	81491194	81491195	chr4:81491195:T:C	rs9307784	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	81738245	81738246	chr4:81738246:A:G	rs1353663	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	81986061	81986062	chr4:81986062:A:G	rs1373241	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	82108521	82108522	chr4:82108522:G:T	rs4693018	G	T	g	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	83357689	83357690	chr4:83357690:A:G	rs58570199	A	G	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	83454580	83454581	chr4:83454581:G:A	rs6535477	G	A	A	Alx1.mouse_homeodomain_1	0	1	-	8.17105328609015	8.74067261241241	CTTAATTAGC
chr4	83599081	83599082	chr4:83599082:C:A	rs1123378	C	A	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	83672687	83672688	chr4:83672688:T:C	rs12643503	T	C	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr4	83880617	83880618	chr4:83880618:G:T	rs7687253	G	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	83885011	83885012	chr4:83885012:A:C	rs60617092	A	C	C	Alx1.mouse_homeodomain_1	3	1	+	7.8208649373008745	3.6904522433704114	GCTAATTAGC
chr4	84810482	84810483	chr4:84810483:A:G	rs10516729	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr4	84927621	84927622	chr4:84927622:C:G	rs111481594	C	G	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	85127199	85127200	chr4:85127200:T:G	rs6811593	T	G	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	85686500	85686501	chr4:85686501:G:A	rs72972852	G	A	a	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	85772637	85772638	chr4:85772638:A:G	rs1452678	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	86403814	86403815	chr4:86403815:A:G	rs61686149	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	87102717	87102718	chr4:87102718:T:C	rs342456	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	87318456	87318457	chr4:87318457:A:T	rs13118664	A	T	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	87353444	87353445	chr4:87353445:A:G	rs11721653	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	87353988	87353989	chr4:87353989:C:T	rs34853672	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	87423646	87423647	chr4:87423647:C:A	rs7681421	C	A	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	87901350	87901351	chr4:87901351:C:T	rs4693906	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	88242370	88242371	chr4:88242371:A:G	rs34226052	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	7.802937221462287	7.233317895140026	TCCAATTACC
chr4	88284456	88284457	chr4:88284457:G:A	rs74387408	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr4	88728339	88728340	chr4:88728340:A:G	rs3017895	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr4	89256915	89256916	chr4:89256916:C:G	rs13142984	C	G	c	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	89291448	89291449	chr4:89291449:T:C	rs55920273	T	C	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	89753279	89753280	chr4:89753280:G:A	rs356168	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.802937221462287	8.656967248991535	TCCAATTACC
chr4	89957370	89957371	chr4:89957371:C:T	rs1443799	C	T	T	Alx1.mouse_homeodomain_1	8	1	+	8.346039445977318	8.00112515077682	CCTAATTACA
chr4	91325192	91325193	chr4:91325193:G:A	rs3762827	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr4	92647398	92647399	chr4:92647399:G:C	rs17842180	G	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	93269638	93269639	chr4:93269639:A:T	rs1433669	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	93269640	93269641	chr4:93269641:T:C	rs1433670	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	93312758	93312759	chr4:93312759:T:C	rs5010006	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	93825770	93825771	chr4:93825771:T:C	rs6836045	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.802937221462287	5.196117331613596	TCCAATTACC
chr4	93825780	93825781	chr4:93825781:G:A	rs6810762	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	93897735	93897736	chr4:93897736:A:G	rs1463169379	A	G	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	94334789	94334790	chr4:94334790:C:G	rs79911406	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.91565877229958	7.603481478804017	TCTAATTACA
chr4	95204610	95204611	chr4:95204611:C:T	rs28660566	C	T	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr4	95578741	95578742	chr4:95578742:G:A	rs78802487	G	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	95642577	95642578	chr4:95642578:C:G	rs7681580	C	G	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	95803090	95803091	chr4:95803091:G:T	rs13116310	G	T	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	95838186	95838187	chr4:95838187:C:T	rs17409065	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	96073785	96073786	chr4:96073786:G:T	rs76045237	G	T	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	96604295	96604296	chr4:96604296:T:G	rs6532641	T	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	96649455	96649456	chr4:96649456:C:T	rs11735922	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	97326032	97326033	chr4:97326033:C:T	rs116789640	C	T	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr4	97326035	97326036	chr4:97326036:T:C	rs79126745	T	C	T	Alx1.mouse_homeodomain_1	8	1	-	9.551601409090008	9.417472771290461	TCTAATTAAA
chr4	98046966	98046967	chr4:98046967:T:A	rs7691433	T	A	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr4	98618346	98618347	chr4:98618347:T:G	rs2866015	T	G	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	98619921	98619922	chr4:98619922:A:G	rs11946198	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	98619942	98619943	chr4:98619943:T:C	rs11941880	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	8.656967248991535	5.759872739655158	TCTAATTACC
chr4	98705860	98705861	chr4:98705861:G:C	rs57069075	G	C	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	98855615	98855616	chr4:98855616:C:G	rs6829146	C	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr4	99003126	99003127	chr4:99003127:G:C	rs1230171	G	C	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	99408428	99408429	chr4:99408429:A:C	rs7663410	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	8.69757138156076	3.8824389886768236	TCCAATTAAA
chr4	99666217	99666218	chr4:99666218:G:A	rs78311502	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	99948314	99948315	chr4:99948315:A:G	rs1803729	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	100313200	100313201	chr4:100313201:T:A	rs6858671	T	A	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	100494271	100494272	chr4:100494272:T:C	rs3775362	T	C	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	100721449	100721450	chr4:100721450:T:C	rs1396286	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	100937107	100937108	chr4:100937108:G:T	rs111273229	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	8.91565877229958	TCTAATTACC
chr4	100982135	100982136	chr4:100982136:A:G	chr4:100982136:A:G	A	G	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	101104923	101104924	chr4:101104924:G:A	rs1273667437	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr4	101670979	101670980	chr4:101670980:C:T	rs72684823	C	T	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	101690176	101690177	chr4:101690177:G:T	rs72684844	G	T	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	102008557	102008558	chr4:102008558:T:C	rs73834553	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr4	102402837	102402838	chr4:102402838:G:A	rs11730344	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	102585216	102585217	chr4:102585217:G:C	rs1610152	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	8.733508391712851	TCTAATTAGC
chr4	102780619	102780620	chr4:102780620:T:C	rs223463	T	C	c	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	104023061	104023062	chr4:104023062:A:G	rs909870790	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	104635704	104635705	chr4:104635705:A:G	rs11097867	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.422165645528107	2.495261658368043	TCTAATTAGT
chr4	104860666	104860667	chr4:104860667:C:A	rs183250029	C	A	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	104966605	104966606	chr4:104966606:A:G	rs1388036	A	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr4	105657596	105657597	chr4:105657597:A:G	rs1982346	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr4	106507789	106507790	chr4:106507790:G:C	rs2049207	G	C	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	106551116	106551117	chr4:106551117:A:C	rs77866307	A	C	C	Alx1.mouse_homeodomain_1	3	1	+	8.298017703190137	4.167605009259675	CCTAATTAAG
chr4	107392500	107392501	chr4:107392501:C:A	rs10488873	C	A	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr4	107612903	107612904	chr4:107612904:G:T	rs2672486	G	T	t	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	108010480	108010481	chr4:108010481:C:G	rs763432	C	G	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	108259906	108259907	chr4:108259907:C:T	rs28622330	C	T	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	108350620	108350621	chr4:108350621:C:T	rs917412	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	108589528	108589529	chr4:108589529:T:G	rs6854331	T	G	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	110088209	110088210	chr4:110088210:G:T	rs56217731	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	9.417472771290461	TCTAATTAGC
chr4	110614259	110614260	chr4:110614260:C:G	rs114650775	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	8.91565877229958	7.603481478804017	TCTAATTACA
chr4	110849774	110849775	chr4:110849775:G:A	rs1906612	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	110854469	110854470	chr4:110854470:G:C	rs77823204	G	C	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	111923888	111923889	chr4:111923889:C:T	rs555124048	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr4	112147873	112147874	chr4:112147874:C:G	rs1025609	C	G	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	112282957	112282958	chr4:112282958:C:T	rs10026212	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr4	112557978	112557979	chr4:112557979:G:A	rs6533627	G	A	a	Alx1.mouse_homeodomain_1	0	1	+	7.8208649373008745	7.940983387749356	GCTAATTAGC
chr4	112637281	112637282	chr4:112637282:G:A	rs114626052	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	113074434	113074435	chr4:113074435:C:T	rs115406174	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	113074437	113074438	chr4:113074438:C:T	rs115213390	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr4	113977885	113977886	chr4:113977886:G:A	rs12498542	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	114563571	114563572	chr4:114563572:C:G	rs13110751	C	G	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr4	114729901	114729902	chr4:114729902:G:A	rs62310282	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	115375422	115375423	chr4:115375423:G:A	rs11736340	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	115829034	115829035	chr4:115829035:A:C	rs13141007	A	C	A	Alx1.mouse_homeodomain_1	2	1	-	8.874801250211958	5.875303695716952	TTTAATTAAC
chr4	116218080	116218081	chr4:116218081:C:T	rs66799393	C	T	c	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr4	116400733	116400734	chr4:116400734:T:A	rs72685175	T	A	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	116677001	116677002	chr4:116677002:T:C	rs4565147	T	C	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	117376746	117376747	chr4:117376747:A:G	rs12330989	A	G	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	117513401	117513402	chr4:117513402:A:G	rs2635298	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	117806256	117806257	chr4:117806257:A:G	rs17863939	A	G	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr4	118761668	118761669	chr4:118761669:G:A	rs186255611	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	119110850	119110851	chr4:119110851:C:T	rs9993189	C	T	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr4	120194151	120194152	chr4:120194152:G:A	rs1509003	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	120268626	120268627	chr4:120268627:A:G	rs72670426	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	120386929	120386930	chr4:120386930:C:T	rs6819743	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	120488952	120488953	chr4:120488953:G:A	rs17050611	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	120696129	120696130	chr4:120696130:A:C	rs11729301	A	C	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr4	121156030	121156031	chr4:121156031:T:C	rs115130336	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr4	121156044	121156045	chr4:121156045:A:G	chr4:121156045:A:G	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr4	121156070	121156071	chr4:121156071:T:C	rs180733308	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	121156074	121156075	chr4:121156075:A:C	rs78047079	A	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	121342865	121342866	chr4:121342866:T:C	rs71602324	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	121490371	121490372	chr4:121490372:G:T	rs1513721	G	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	121993613	121993614	chr4:121993614:T:C	rs77054138	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	122760000	122760001	chr4:122760001:C:A	rs309375	C	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	123422184	123422185	chr4:123422185:T:A	rs77325462	T	A	t	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	123938341	123938342	chr4:123938342:T:C	rs10010854	T	C	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	124580423	124580424	chr4:124580424:A:G	rs1390077	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	124637407	124637408	chr4:124637408:A:G	rs9307543	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	3.156272402217758	CCCAATTAAA
chr4	124806571	124806572	chr4:124806572:G:A	rs77890177	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	125053254	125053255	chr4:125053255:A:T	rs2647132	A	T	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	125908603	125908604	chr4:125908604:A:G	rs67136242	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	126242809	126242810	chr4:126242810:A:C	rs3038311	A	C	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	126330384	126330385	chr4:126330385:A:G	rs34083220	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	126726099	126726100	chr4:126726100:A:G	rs79834733	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	126827211	126827212	chr4:126827212:G:C	rs74492413	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	8.74067261241241	8.315399756142845	TTTAATTAGC
chr4	127441811	127441812	chr4:127441812:T:C	rs10003773	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	7.879478364183603	2.8917564479146227	TCCAATTAGG
chr4	127504944	127504945	chr4:127504945:G:A	rs12506112	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	128449362	128449363	chr4:128449363:G:A	rs4246727	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	129309308	129309309	chr4:129309309:T:C	rs4623025	T	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	129325150	129325151	chr4:129325151:T:C	rs4324562	T	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	129428371	129428372	chr4:129428372:G:A	rs1368587	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr4	129863389	129863390	chr4:129863390:G:A	rs2968999	G	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	130391050	130391051	chr4:130391051:C:T	rs9993825	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr4	130599859	130599860	chr4:130599860:G:A	rs6816837	G	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	130703228	130703229	chr4:130703229:A:C	rs13149533	A	C	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr4	130703239	130703240	chr4:130703240:C:T	rs4455431	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr4	130708572	130708573	chr4:130708573:G:A	rs2311779	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	131338131	131338132	chr4:131338132:G:T	rs35810515	G	T	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	132200334	132200335	chr4:132200335:G:A	rs13143352	G	A	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	133132727	133132728	chr4:133132728:A:G	rs62311797	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	133148828	133148829	chr4:133148829:C:T	chr4:133148829:C:T	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	134027257	134027258	chr4:134027258:T:C	rs11939044	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	134544725	134544726	chr4:134544726:T:C	rs11736391	T	C	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	135173519	135173520	chr4:135173520:T:G	rs10009456	T	G	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	135548900	135548901	chr4:135548901:A:G	rs6848619	A	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr4	136286062	136286063	chr4:136286063:T:C	rs77165023	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	136643455	136643456	chr4:136643456:T:C	rs34262566	T	C	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr4	136682356	136682357	chr4:136682357:C:A	rs55765141	C	A	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	137685514	137685515	chr4:137685515:T:C	rs28623343	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	137685552	137685553	chr4:137685553:A:G	rs1596796	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	137861622	137861623	chr4:137861623:A:G	rs13144581	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.449528393942392	TTTAATTAAA
chr4	138321145	138321146	chr4:138321146:G:A	rs13103232	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr4	138450884	138450885	chr4:138450885:A:T	rs17050424	A	T	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	138512691	138512692	chr4:138512692:G:A	rs299119	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	138857417	138857418	chr4:138857418:C:G	rs62322142	C	G	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	138938003	138938004	chr4:138938004:G:A	rs139964351	G	A	g	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	139014852	139014853	chr4:139014853:G:A	rs76388329	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr4	139189279	139189280	chr4:139189280:C:G	rs12500887	C	G	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr4	139243958	139243959	chr4:139243959:T:C	rs542454795	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.69757138156076	8.1279520552385	TCCAATTAAA
chr4	139243977	139243978	chr4:139243978:A:C	rs72724777	A	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr4	139914698	139914699	chr4:139914699:G:A	rs1378473	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	140186039	140186040	chr4:140186040:A:G	rs138125701	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr4	140876382	140876383	chr4:140876383:G:A	rs11942518	G	A	g	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	141021204	141021205	chr4:141021205:G:A	rs2059499	G	A	A	Alx1.mouse_homeodomain_1	9	1	+	7.309859037861343	7.993823417438953	CCCAATTAGG
chr4	141091232	141091233	chr4:141091233:T:A	rs56201046	T	A	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	141311492	141311493	chr4:141311493:G:A	chr4:141311493:G:A	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr4	141391677	141391678	chr4:141391678:A:G	rs151101256	A	G	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	141415837	141415838	chr4:141415838:T:C	rs116793279	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	142238985	142238986	chr4:142238986:T:C	rs28611471	T	C	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	142238988	142238989	chr4:142238989:C:T	rs28690972	C	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	142331583	142331584	chr4:142331584:C:A	rs2646096	C	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	142347374	142347375	chr4:142347375:T:A	rs882004	T	A	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	142385539	142385540	chr4:142385540:G:C	rs28588752	G	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	142402452	142402453	chr4:142402453:C:T	rs11722756	C	T	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	142485679	142485680	chr4:142485680:A:G	rs3844178	A	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr4	142750716	142750717	chr4:142750717:C:T	rs79293899	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	143996462	143996463	chr4:143996463:T:C	rs6537238	T	C	c	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	144353886	144353887	chr4:144353887:A:G	rs6537279	A	G	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr4	144461374	144461375	chr4:144461375:C:T	rs55694701	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr4	144461379	144461380	chr4:144461380:C:G	rs56268708	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	8.563442743761213	8.061628744770331	TCCAATTAGA
chr4	145776821	145776822	chr4:145776822:T:C	rs72952689	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	146132953	146132954	chr4:146132954:G:A	rs74448418	G	A	g	Alx1.mouse_homeodomain_1	8	1	+	8.17105328609015	8.305181923889696	CTTAATTAGC
chr4	146521424	146521425	chr4:146521425:C:T	rs75265549	C	T	c	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	147518948	147518949	chr4:147518949:A:G	rs554833791	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	147518963	147518964	chr4:147518964:A:G	rs547006671	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.8478534449682	8.16388906539059	CCTAATTAGA
chr4	148049385	148049386	chr4:148049386:C:T	rs34580209	C	T	T	Alx1.mouse_homeodomain_1	9	1	-	7.662075066399709	8.346039445977318	CCTAATTACG
chr4	148566083	148566084	chr4:148566084:T:C	rs2884467	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	149167136	149167137	chr4:149167137:C:T	rs9998024	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr4	149523214	149523215	chr4:149523215:C:T	rs72726121	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.233317895140026	7.802937221462287	CCCAATTACC
chr4	150009599	150009600	chr4:150009600:A:G	rs4260523	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	150570795	150570796	chr4:150570796:G:A	rs13124512	G	A	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	151229020	151229021	chr4:151229021:G:A	rs114440836	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr4	151761649	151761650	chr4:151761650:A:G	rs3762907	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	151761652	151761653	chr4:151761653:T:C	rs3762906	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	151992591	151992592	chr4:151992592:T:C	rs140365649	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	7.8208649373008745	6.9668349097716264	GCTAATTAGC
chr4	151992594	151992595	chr4:151992595:T:C	rs360935	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	7.8208649373008745	2.833143021031893	GCTAATTAGC
chr4	152572492	152572493	chr4:152572493:C:T	rs78209474	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr4	153153218	153153219	chr4:153153219:C:A	chr4:153153219:C:A	C	A	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	153166367	153166368	chr4:153166368:C:T	rs4696428	C	T	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	153491399	153491400	chr4:153491400:C:T	rs74537360	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	154462936	154462937	chr4:154462937:C:T	chr4:154462937:C:T	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr4	154552233	154552234	chr4:154552234:A:G	rs72679195	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	156085052	156085053	chr4:156085053:A:T	rs4488897	A	T	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr4	156497422	156497423	chr4:156497423:T:C	rs4482816	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	156619691	156619692	chr4:156619692:G:A	rs6832969	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr4	156663832	156663833	chr4:156663833:T:G	rs191658350	T	G	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr4	156672550	156672551	chr4:156672551:C:T	rs4691372	C	T	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	156710505	156710506	chr4:156710506:T:A	rs9884264	T	A	T	Alx1.mouse_homeodomain_1	8	1	-	8.874801250211958	7.893944318221031	TTTAATTAAC
chr4	156767117	156767118	chr4:156767118:T:C	rs78525462	T	C	t	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	156770940	156770941	chr4:156770941:T:C	rs112969588	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr4	157015074	157015075	chr4:157015075:T:C	rs77573336	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	157057194	157057195	chr4:157057195:T:G	rs62330060	T	G	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	157076541	157076542	chr4:157076542:A:G	rs79925137	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	157076567	157076568	chr4:157076568:A:G	rs80301105	A	G	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	157844524	157844525	chr4:157844525:A:G	rs6536284	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	160449759	160449760	chr4:160449760:T:A	rs62334232	T	A	T	Alx1.mouse_homeodomain_1	3	1	-	9.292909885781963	5.565428612090355	TCTAATTAAC
chr4	160745214	160745215	chr4:160745215:G:A	rs10011041	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	161091384	161091385	chr4:161091385:G:C	rs17303353	G	C	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr4	161186841	161186842	chr4:161186842:T:C	rs2872188	T	C	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr4	162154887	162154888	chr4:162154888:T:C	rs12501340	T	C	c	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	162759178	162759179	chr4:162759179:A:C	rs117906929	A	C	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	163402979	163402980	chr4:163402980:C:T	rs76413293	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	163447344	163447345	chr4:163447345:C:A	rs117258812	C	A	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	163553315	163553316	chr4:163553316:T:C	rs2320771	T	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr4	163793774	163793775	chr4:163793775:T:C	rs7695742	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.656967248991535	3.669245332722553	TCTAATTACC
chr4	165440823	165440824	chr4:165440824:G:A	rs183320380	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	166122316	166122317	chr4:166122317:T:A	rs1497945	T	A	T	Alx1.mouse_homeodomain_1	2	1	+	8.74067261241241	6.647828709103172	TTTAATTAGC
chr4	166733889	166733890	chr4:166733890:G:A	rs62352805	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	166878747	166878748	chr4:166878748:G:A	rs13123001	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr4	167032843	167032844	chr4:167032844:G:A	rs72699613	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	167552388	167552389	chr4:167552389:C:T	rs1914620	C	T	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	167659125	167659126	chr4:167659126:C:T	rs7669390	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr4	168722795	168722796	chr4:168722796:G:T	rs114465219	G	T	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr4	168739855	168739856	chr4:168739856:G:A	rs7698312	G	A	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	169335115	169335116	chr4:169335116:T:G	rs6553426	T	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	169611706	169611707	chr4:169611707:C:T	rs28535010	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.981982082767747	9.551601409090008	CCTAATTAAA
chr4	171358920	171358921	chr4:171358921:C:T	rs7697325	C	T	T	Alx1.mouse_homeodomain_1	1	1	+	9.158781247982416	8.74067261241241	TCTAATTAGC
chr4	173106004	173106005	chr4:173106005:C:T	rs28709360	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	173466525	173466526	chr4:173466526:G:T	rs142572685	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	173510075	173510076	chr4:173510076:T:C	rs72992532	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr4	174040985	174040986	chr4:174040986:G:T	rs11133027	G	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr4	174357473	174357474	chr4:174357474:A:T	rs4695776	A	T	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	174437495	174437496	chr4:174437496:A:G	rs12498292	A	G	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	174555949	174555950	chr4:174555950:T:G	rs10032848	T	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	174657828	174657829	chr4:174657829:C:T	rs13140642	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr4	174919751	174919752	chr4:174919752:T:C	rs7666569	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr4	175771199	175771200	chr4:175771200:C:T	rs17658688	C	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr4	176445577	176445578	chr4:176445578:T:C	rs1377841	T	C	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	176875822	176875823	chr4:176875823:G:T	rs2645364	G	T	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	176891475	176891476	chr4:176891476:C:T	rs9992957	C	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr4	177263867	177263868	chr4:177263868:G:A	rs72702924	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	177699849	177699850	chr4:177699850:C:T	rs1993280	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	178090987	178090988	chr4:178090988:A:T	rs57027014	A	T	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	179399540	179399541	chr4:179399541:C:T	rs12508123	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	179501897	179501898	chr4:179501898:G:A	rs182659844	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr4	180423920	180423921	chr4:180423921:T:C	rs17178678	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr4	180933334	180933335	chr4:180933335:C:T	rs2056489	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr4	181142172	181142173	chr4:181142173:A:T	rs4861911	A	T	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr4	181142193	181142194	chr4:181142194:C:T	rs75144239	C	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	181167232	181167233	chr4:181167233:A:G	rs190143262	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	181637603	181637604	chr4:181637604:A:G	rs12510543	A	G	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	181739470	181739471	chr4:181739471:T:C	rs73012886	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr4	181952860	181952861	chr4:181952861:C:T	rs532095176	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr4	182085316	182085317	chr4:182085317:T:C	rs17072794	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr4	182449446	182449447	chr4:182449447:C:T	rs112921242	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr4	182880795	182880796	chr4:182880796:G:A	rs76788733	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr4	182880825	182880826	chr4:182880826:C:T	rs150297972	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	183485767	183485768	chr4:183485768:C:G	rs78742249	C	G	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr4	183541745	183541746	chr4:183541746:A:G	rs77156085	A	G	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr4	183578737	183578738	chr4:183578738:C:T	rs74289570	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	183765185	183765186	chr4:183765186:C:G	rs67764380	C	G	C	Alx1.mouse_homeodomain_1	8	1	-	7.879478364183603	7.377664365192722	TCCAATTAGG
chr4	183904542	183904543	chr4:183904543:A:G	rs17075136	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr4	183987913	183987914	chr4:183987914:T:G	rs938676596	T	G	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	184200494	184200495	chr4:184200495:T:G	rs10004636	T	G	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	184250110	184250111	chr4:184250111:A:G	rs1237308	A	G	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	184255369	184255370	chr4:184255370:C:G	rs78195093	C	G	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr4	184280475	184280476	chr4:184280476:A:T	rs74804987	A	T	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	184383308	184383309	chr4:184383309:T:C	rs1105207	T	C	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	184383322	184383323	chr4:184383323:C:G	rs1105206	C	G	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr4	184475134	184475135	chr4:184475135:C:T	rs562648439	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr4	184765701	184765702	chr4:184765702:C:G	rs3792314	C	G	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	184899795	184899796	chr4:184899796:A:G	rs61005773	A	G	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	184988999	184989000	chr4:184989000:T:G	rs72709504	T	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr4	185221335	185221336	chr4:185221336:G:T	rs72706093	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.74067261241241	8.999364135720455	TTTAATTAGC
chr4	185267305	185267306	chr4:185267306:C:T	rs3112865	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr4	185398638	185398639	chr4:185398639:A:G	rs3087564	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	185591908	185591909	chr4:185591909:C:T	rs10033502	C	T	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	185955563	185955564	chr4:185955564:A:T	rs976496064	A	T	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	185955607	185955608	chr4:185955608:C:T	rs1452586747	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr4	186104676	186104677	chr4:186104677:A:G	rs115973251	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	186420769	186420770	chr4:186420770:G:C	rs2060769	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	186808459	186808460	chr4:186808460:T:C	rs1019895	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	187152746	187152747	chr4:187152747:G:C	rs10016251	G	C	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	187283065	187283066	chr4:187283066:G:C	rs972245	G	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr4	187437780	187437781	chr4:187437781:G:T	rs3898495	G	T	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr4	187679694	187679695	chr4:187679695:G:A	rs1011294	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	8.312052953791037	7.575437351336728	TCTAATTATC
chr4	188017313	188017314	chr4:188017314:C:T	rs2172340	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	188260578	188260579	chr4:188260579:G:C	rs28379547	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	188480446	188480447	chr4:188480447:A:C	rs76283491	A	C	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	188855000	188855001	chr4:188855001:C:T	rs72719378	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr4	189100527	189100528	chr4:189100528:T:A	rs10461312	T	A	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr4	189980383	189980384	chr4:189980384:A:G	rs148805603	A	G	.	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr5	105771	105772	chr5:105772:T:A	rs532078476	T	A	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr5	201425	201426	chr5:201426:A:C	rs2059859	A	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	464037	464038	chr5:464038:C:T	rs2561667	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	501127	501128	chr5:501128:T:G	rs78019339	T	G	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr5	1066623	1066624	chr5:1066624:G:A	rs4975695	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.346039445977318	8.00112515077682	CCTAATTACA
chr5	1429853	1429854	chr5:1429854:T:C	rs460700	T	C	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr5	1470993	1470994	chr5:1470994:T:C	rs27054	T	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr5	1756710	1756711	chr5:1756711:A:C	rs1029375193	A	C	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	1948188	1948189	chr5:1948189:C:T	rs13183501	C	T	c	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	2113240	2113241	chr5:2113241:G:A	rs143819623	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	2258423	2258424	chr5:2258424:A:T	rs56731253	A	T	A	Alx1.mouse_homeodomain_1	8	1	+	8.723290559459702	7.742433627468776	CCTAATTAAC
chr5	2498364	2498365	chr5:2498365:G:A	rs1493650	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	2546947	2546948	chr5:2546948:G:A	rs13189651	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.869260531930455	8.723290559459702	CCCAATTAAC
chr5	2660516	2660517	chr5:2660517:C:G	rs10056593	C	G	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	2752159	2752160	chr5:2752160:A:G	rs577615335	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	3277962	3277963	chr5:3277963:G:C	rs4866438	G	C	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	3277977	3277978	chr5:3277978:T:C	rs6885708	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.867637029512398	8.298017703190137	TCTAATTAAG
chr5	3357097	3357098	chr5:3357098:G:T	rs116263526	G	T	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	3430886	3430887	chr5:3430887:A:G	rs12658228	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr5	3650698	3650699	chr5:3650699:T:C	rs35712759	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	3681949	3681950	chr5:3681950:G:T	rs190609158	G	T	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	5419673	5419674	chr5:5419674:G:C	rs79382631	G	C	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	5419677	5419678	chr5:5419678:C:T	rs755061	C	T	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr5	5483966	5483967	chr5:5483967:A:G	rs16875618	A	G	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	6203014	6203015	chr5:6203015:G:A	rs2964767	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	7072353	7072354	chr5:7072354:C:T	rs6420051	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	7377878	7377879	chr5:7377879:C:T	rs16878604	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	7784052	7784053	chr5:7784053:G:A	rs16879056	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	8239336	8239337	chr5:8239337:C:T	rs1506111	C	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	9188083	9188084	chr5:9188084:G:A	rs56738322	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	9654188	9654189	chr5:9654189:A:C	rs17331898	A	C	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	10146838	10146839	chr5:10146839:G:A	rs1312026325	G	A	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr5	10268224	10268225	chr5:10268225:G:A	rs72740404	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	10367770	10367771	chr5:10367771:A:T	rs2640713	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	9.133492773520002	5.406011499828394	TTTAATTAAA
chr5	10528479	10528480	chr5:10528480:T:A	rs11742260	T	A	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr5	10568478	10568479	chr5:10568479:A:G	rs12522627	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	10706913	10706914	chr5:10706914:G:A	rs2930052	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	10706954	10706955	chr5:10706955:C:T	rs74520780	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	10837049	10837050	chr5:10837050:T:G	rs79307238	T	G	T	Alx1.mouse_homeodomain_1	2	1	+	7.940983387749356	4.94148583325435	ACTAATTAGC
chr5	10988623	10988624	chr5:10988624:C:T	rs4702780	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	13347057	13347058	chr5:13347058:G:A	rs11958368	G	A	-	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	13567588	13567589	chr5:13567589:T:C	rs179819	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	13641001	13641002	chr5:13641002:A:G	rs10074369	A	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	13645474	13645475	chr5:13645475:C:T	rs2676228	C	T	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr5	13988375	13988376	chr5:13988376:C:T	rs193154	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	14025742	14025743	chr5:14025743:G:A	rs10462718	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.438879858252715	7.702264255798406	TCCAATTAAC
chr5	14298639	14298640	chr5:14298640:C:A	chr5:14298640:C:A	C	A	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	14440921	14440922	chr5:14440922:C:G	chr5:14440922:C:G	C	G	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	14440921	14440922	chr5:14440922:C:T	rs190502248	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	14440955	14440956	chr5:14440956:G:A	rs27116	G	A	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	14545432	14545433	chr5:14545433:G:C	chr5:14545433:G:C	G	C	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	14741559	14741560	chr5:14741560:C:T	rs192218	C	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	15007692	15007693	chr5:15007693:A:C	rs6867275	A	C	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	15263723	15263724	chr5:15263724:T:C	rs2607527	T	C	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	15321905	15321906	chr5:15321906:C:T	rs112235313	C	T	.	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	15501446	15501447	chr5:15501447:T:A	chr5:15501447:T:A	T	A	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	15585335	15585336	chr5:15585336:T:C	rs997636228	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr5	16390683	16390684	chr5:16390684:A:G	rs335954	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	16470932	16470933	chr5:16470933:C:A	rs28008	C	A	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	16900365	16900366	chr5:16900366:C:T	rs2253871	C	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	16934799	16934800	chr5:16934800:A:G	rs78411653	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.69757138156076	6.09075149171207	TCCAATTAAA
chr5	17282786	17282787	chr5:17282787:C:T	rs77499817	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	17352489	17352490	chr5:17352490:G:A	rs57275523	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	17413535	17413536	chr5:17413536:T:C	rs57190843	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	17890131	17890132	chr5:17890132:A:G	rs7707189	A	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	18169922	18169923	chr5:18169923:T:C	rs6880498	T	C	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr5	19177015	19177016	chr5:19177016:T:A	rs13172258	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	19930216	19930217	chr5:19930217:A:G	rs12518927	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.852546319205846	2.8808666661851037	CCTAATTAGT
chr5	20834334	20834335	chr5:20834335:G:A	rs6896266	G	A	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	21050492	21050493	chr5:21050493:T:A	rs13436056	T	A	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	21910904	21910905	chr5:21910905:G:C	rs9687594	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	22001362	22001363	chr5:22001363:T:A	rs12514990	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	22666622	22666623	chr5:22666623:A:T	rs10064006	A	T	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	23403547	23403548	chr5:23403548:T:A	rs35362546	T	A	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	23742775	23742776	chr5:23742776:T:A	rs3932337	T	A	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	24515793	24515794	chr5:24515794:T:A	rs62349564	T	A	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr5	26098946	26098947	chr5:26098947:A:G	rs68068988	A	G	a	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	26229355	26229356	chr5:26229356:C:T	rs35307968	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	28109252	28109253	chr5:28109253:G:A	rs58609842	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	29005490	29005491	chr5:29005491:A:C	rs923624	A	C	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	29061608	29061609	chr5:29061609:G:A	rs644330	G	A	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	29092247	29092248	chr5:29092248:G:A	rs251057	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	29262538	29262539	chr5:29262539:G:T	rs10440631	G	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	29821860	29821861	chr5:29821861:C:A	rs115487168	C	A	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr5	30841586	30841587	chr5:30841587:T:G	rs6892503	T	G	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	30845357	30845358	chr5:30845358:G:A	rs7704530	G	A	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	30933749	30933750	chr5:30933750:T:C	rs13162278	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr5	31424653	31424654	chr5:31424654:T:C	rs17485323	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	31682484	31682485	chr5:31682485:A:T	rs7700255	A	T	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr5	31775117	31775118	chr5:31775118:C:T	rs7736346	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	31907417	31907418	chr5:31907418:G:A	rs6867438	G	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	31907780	31907781	chr5:31907781:A:C	rs7712010	A	C	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	31934589	31934590	chr5:31934590:C:T	rs1553554	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	31981298	31981299	chr5:31981299:G:C	rs6888188	G	C	g	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	32169121	32169122	chr5:32169122:T:A	rs2619870	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	32339963	32339964	chr5:32339964:A:G	rs13162556	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	32690271	32690272	chr5:32690272:T:C	rs112766364	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr5	32692131	32692132	chr5:32692132:G:C	rs17540044	G	C	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	33517132	33517133	chr5:33517133:C:T	rs13178888	C	T	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	33688061	33688062	chr5:33688062:A:C	rs9292504	A	C	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	33697179	33697180	chr5:33697180:T:A	rs6451015	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	33737314	33737315	chr5:33737315:A:G	rs79610522	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	33879638	33879639	chr5:33879639:A:G	rs2277010	A	G	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	34519615	34519616	chr5:34519616:C:A	rs4703443	C	A	C	Alx1.mouse_homeodomain_1	9	1	+	7.940983387749356	8.199674911057402	ACTAATTAGC
chr5	34623256	34623257	chr5:34623257:T:C	rs111414896	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	34700899	34700900	chr5:34700900:T:C	rs7709378	T	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	35050402	35050403	chr5:35050403:C:G	rs1587059	C	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	35516479	35516480	chr5:35516480:C:T	rs10059179	C	T	A	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	35772212	35772213	chr5:35772213:G:A	rs4869623	G	A	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	36017289	36017290	chr5:36017290:A:G	rs560410529	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	36152485	36152486	chr5:36152486:G:A	rs143239170	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	36374226	36374227	chr5:36374227:C:T	rs6888195	C	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	36721189	36721190	chr5:36721190:T:C	rs16903296	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	36732459	36732460	chr5:36732460:A:G	rs245672	A	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr5	37021830	37021831	chr5:37021831:T:C	rs35701604	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr5	37860038	37860039	chr5:37860039:T:A	rs16903758	T	A	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr5	37919311	37919312	chr5:37919312:C:T	rs72749214	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	38053036	38053037	chr5:38053037:C:A	rs270539	C	A	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	38189403	38189404	chr5:38189404:T:C	rs75235474	T	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr5	38190035	38190036	chr5:38190036:G:A	rs13362201	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	38198797	38198798	chr5:38198798:T:C	rs555647925	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.304751220453168	5.6979313306044785	TCCAATTAGC
chr5	38381601	38381602	chr5:38381602:A:G	rs2731969	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	7.735131894130908	2.747409977861927	CCCAATTAGC
chr5	38589913	38589914	chr5:38589914:A:G	rs6451392	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	38913082	38913083	chr5:38913083:T:C	rs9632406	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.981982082767747	8.1279520552385	CCTAATTAAA
chr5	39074193	39074194	chr5:39074194:G:C	rs2303808	G	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	39468990	39468991	chr5:39468991:A:G	rs6451426	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	7.9549935751004215	7.8208649373008745	GCTAATTAAC
chr5	39544835	39544836	chr5:39544836:T:A	rs78016580	T	A	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr5	39762908	39762909	chr5:39762909:A:G	rs16869253	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	39907054	39907055	chr5:39907055:T:G	rs1113439	T	G	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	40781924	40781925	chr5:40781925:T:G	rs11749437	T	G	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	41194242	41194243	chr5:41194243:G:A	rs58840028	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr5	43121808	43121809	chr5:43121809:C:T	rs946045073	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	43194234	43194235	chr5:43194235:T:C	rs887752234	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.8478534449682	6.24103355511951	CCTAATTAGA
chr5	44536823	44536824	chr5:44536824:A:T	rs576929690	A	T	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	45419377	45419378	chr5:45419378:G:A	rs141823863	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr5	45454329	45454330	chr5:45454330:G:A	rs2878967	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.735131894130908	8.589161921660155	CCCAATTAGC
chr5	45454344	45454345	chr5:45454345:G:T	chr5:45454345:G:T	G	T	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	50683122	50683123	chr5:50683123:T:G	rs10940472	T	G	.	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr5	50840796	50840797	chr5:50840797:T:C	rs9632392	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr5	51044114	51044115	chr5:51044115:G:A	rs55655243	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	51525075	51525076	chr5:51525076:A:G	rs1479615	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	51583034	51583035	chr5:51583035:C:T	chr5:51583035:C:T	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	51889368	51889369	chr5:51889369:T:C	rs7710838	T	C	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr5	52436205	52436206	chr5:52436206:G:T	chr5:52436206:G:T	G	T	.	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	52686305	52686306	chr5:52686306:C:A	rs350460	C	A	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	52748678	52748679	chr5:52748679:C:A	rs164656	C	A	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr5	52891969	52891970	chr5:52891970:C:T	rs7731598	C	T	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr5	53245987	53245988	chr5:53245988:C:A	rs4099264	C	A	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr5	53360467	53360468	chr5:53360468:G:T	rs62357774	G	T	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	53645710	53645711	chr5:53645711:A:G	rs42565	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	54226253	54226254	chr5:54226254:G:C	rs71622105	G	C	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	54455623	54455624	chr5:54455624:G:T	chr5:54455624:G:T	G	T	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	54455635	54455636	chr5:54455636:G:C	chr5:54455636:G:C	G	C	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	54755231	54755232	chr5:54755232:A:G	rs6450244	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	55159188	55159189	chr5:55159189:A:T	rs336083	A	T	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	55534110	55534111	chr5:55534111:G:C	rs35774487	G	C	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	55590493	55590494	chr5:55590494:A:C	rs1983188	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	55973426	55973427	chr5:55973427:A:G	rs972539122	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.304751220453168	3.3330715674324276	TCCAATTAGC
chr5	56043634	56043635	chr5:56043635:C:T	rs12514537	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	56175810	56175811	chr5:56175811:C:G	rs2112868	C	G	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	56292040	56292041	chr5:56292041:T:C	rs158357	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	8.346039445977318	2.4191354588172542	CCTAATTACA
chr5	56492904	56492905	chr5:56492905:T:C	rs16885544	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	56601623	56601624	chr5:56601624:C:T	rs13178221	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	56734437	56734438	chr5:56734438:G:A	rs115400067	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	57495841	57495842	chr5:57495842:T:G	rs2910488	T	G	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	57556824	57556825	chr5:57556825:G:A	rs138916218	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	57751139	57751140	chr5:57751140:T:C	rs10054371	T	C	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr5	57777024	57777025	chr5:57777025:G:T	rs16887407	G	T	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	57813666	57813667	chr5:57813667:G:A	rs854053	G	A	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr5	59174086	59174087	chr5:59174087:C:G	rs75717010	C	G	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	59392263	59392264	chr5:59392264:G:A	rs573230	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	59793458	59793459	chr5:59793459:G:A	rs56312915	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	60685847	60685848	chr5:60685848:T:C	rs4315877	T	C	c	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	60710654	60710655	chr5:60710655:C:T	rs72755178	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.802937221462287	7.458022926261789	TCCAATTACC
chr5	61202475	61202476	chr5:61202476:G:T	rs115326116	G	T	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	61861172	61861173	chr5:61861173:C:T	rs114325308	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr5	62043746	62043747	chr5:62043747:G:A	rs1392251960	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	62477375	62477376	chr5:62477376:C:G	rs1301065	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	63608272	63608273	chr5:63608273:C:T	rs7445990	C	T	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	65321539	65321540	chr5:65321540:T:C	rs62369623	T	C	t	Alx1.mouse_homeodomain_1	1	1	+	9.133492773520002	9.551601409090008	TTTAATTAAA
chr5	65835476	65835477	chr5:65835477:G:A	rs2561217	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.346039445977318	7.927930810407313	CCTAATTACA
chr5	66230676	66230677	chr5:66230677:A:G	rs253224	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.17105328609015	5.273958776753774	CTTAATTAGC
chr5	66532452	66532453	chr5:66532453:C:T	rs73764023	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	66801795	66801796	chr5:66801796:A:C	rs77263248	A	C	A	Alx1.mouse_homeodomain_1	6	1	-	9.292909885781963	4.477777492898025	TCTAATTAAC
chr5	67019424	67019425	chr5:67019425:C:T	rs143734105	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.802937221462287	7.384828585892281	TCCAATTACC
chr5	67205011	67205012	chr5:67205012:A:T	rs1428471	A	T	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	67205013	67205014	chr5:67205014:A:C	rs1428472	A	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	67266036	67266037	chr5:67266037:G:A	rs73114212	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	67462763	67462764	chr5:67462764:G:C	rs10041803	G	C	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	67462807	67462808	chr5:67462808:C:T	rs10041759	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	68353858	68353859	chr5:68353859:A:T	chr5:68353859:A:T	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	68457790	68457791	chr5:68457791:C:T	rs1366196	C	T	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	68749984	68749985	chr5:68749985:C:T	rs113163848	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr5	68850206	68850207	chr5:68850207:T:A	rs62356093	T	A	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	69266081	69266082	chr5:69266082:C:T	rs34261117	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr5	69289242	69289243	chr5:69289243:C:T	rs72767873	C	T	c	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	71704282	71704283	chr5:71704283:C:T	rs16871210	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	71860199	71860200	chr5:71860200:T:C	rs16872596	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	8.346039445977318	5.739219556128628	CCTAATTACA
chr5	71872376	71872377	chr5:71872377:G:A	rs7709495	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	71954112	71954113	chr5:71954113:A:G	rs2662334	A	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	72007480	72007481	chr5:72007481:G:A	rs1010376	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	8.422165645528107	8.556294283327654	TCTAATTAGT
chr5	72107891	72107892	chr5:72107892:G:C	rs6894541	G	C	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	72494773	72494774	chr5:72494774:T:G	rs115206490	T	G	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	72494787	72494788	chr5:72494788:G:A	rs140197000	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	73171191	73171192	chr5:73171192:G:A	rs73762291	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	73285232	73285233	chr5:73285233:G:A	rs7719116	G	A	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr5	73399811	73399812	chr5:73399812:G:A	rs13178488	G	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	73515331	73515332	chr5:73515332:A:G	rs10462345	A	G	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	73525712	73525713	chr5:73525713:T:C	rs142749649	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	73894293	73894294	chr5:73894294:T:A	rs2973530	T	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	73969947	73969948	chr5:73969948:T:C	rs369675	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	74372508	74372509	chr5:74372509:C:T	rs548734	C	T	c	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr5	74382810	74382811	chr5:74382811:G:A	rs540104	G	A	a	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	74396226	74396227	chr5:74396227:T:C	rs10942710	T	C	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	74812020	74812021	chr5:74812021:T:C	rs1350097	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr5	75007358	75007359	chr5:75007359:A:G	chr5:75007359:A:G	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	75238076	75238077	chr5:75238077:G:A	rs28539749	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	75885184	75885185	chr5:75885185:C:G	rs11949546	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	76304325	76304326	chr5:76304326:A:G	rs246812	A	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	76443505	76443506	chr5:76443506:G:A	rs4130148	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr5	76491320	76491321	chr5:76491321:C:T	rs72775783	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	76583727	76583728	chr5:76583728:A:G	rs905164	A	G	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr5	76704151	76704152	chr5:76704152:T:C	rs3797451	T	C	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	77499782	77499783	chr5:77499783:C:T	rs1380577	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	78287865	78287866	chr5:78287866:A:T	rs13188053	A	T	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	78320392	78320393	chr5:78320393:A:G	rs13175253	A	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr5	78590006	78590007	chr5:78590007:C:T	rs6880530	C	T	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr5	78638922	78638923	chr5:78638923:T:C	rs7724320	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr5	78977724	78977725	chr5:78977725:C:A	rs4470743	C	A	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	79031395	79031396	chr5:79031396:G:T	rs116236157	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr5	79071268	79071269	chr5:79071269:T:C	rs673752	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	79866549	79866550	chr5:79866550:C:T	rs264997	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	80138663	80138664	chr5:80138664:A:C	rs6891705	A	C	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	80178494	80178495	chr5:80178495:T:C	rs11951586	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr5	80179013	80179014	chr5:80179014:G:A	rs4704620	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr5	80231202	80231203	chr5:80231203:C:T	rs34765704	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	80317462	80317463	chr5:80317463:C:T	rs10060692	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	81450508	81450509	chr5:81450509:C:T	rs6866156	C	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	81554272	81554273	chr5:81554273:A:C	rs11954000	A	C	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	82275215	82275216	chr5:82275216:T:C	rs76062650	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr5	82279229	82279230	chr5:82279230:C:G	rs3756682	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	82863072	82863073	chr5:82863073:G:A	rs72763783	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	83572353	83572354	chr5:83572354:G:A	rs309585	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	83787247	83787248	chr5:83787248:A:G	rs72772990	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr5	84080562	84080563	chr5:84080563:T:G	rs1559064	T	G	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	84155769	84155770	chr5:84155770:T:C	rs348893	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	84253981	84253982	chr5:84253982:T:C	rs16901006	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	84886275	84886276	chr5:84886276:T:C	rs6865339	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	85148823	85148824	chr5:85148824:A:G	rs13354392	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	87650312	87650313	chr5:87650313:C:T	rs13158939	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	87818635	87818636	chr5:87818636:C:A	rs116101296	C	A	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	88285770	88285771	chr5:88285771:A:C	rs4916897	A	C	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr5	88671914	88671915	chr5:88671915:C:T	rs115680316	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	89542922	89542923	chr5:89542923:A:G	rs6864306	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	90170364	90170365	chr5:90170365:T:A	rs6452875	T	A	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	90526492	90526493	chr5:90526493:A:G	rs1812737	A	G	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	91187522	91187523	chr5:91187523:T:C	rs78713949	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.312052953791037	7.742433627468776	TCTAATTATC
chr5	91384051	91384052	chr5:91384052:C:T	rs147153541	C	T	c	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	92309540	92309541	chr5:92309541:T:G	rs75851257	T	G	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	92605818	92605819	chr5:92605819:T:C	rs113546728	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.8478534449682	7.993823417438953	CCTAATTAGA
chr5	93005882	93005883	chr5:93005883:C:T	rs163946	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	93332277	93332278	chr5:93332278:G:A	rs1460744	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	93574041	93574042	chr5:93574042:C:A	rs73135306	C	A	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	93642664	93642665	chr5:93642665:T:C	rs73135377	T	C	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	94601156	94601157	chr5:94601157:G:A	rs72773507	G	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	95394874	95394875	chr5:95394875:A:G	rs2731823	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.01360700198315	3.041927348962409	TCCAATTAAG
chr5	95962126	95962127	chr5:95962127:C:G	chr5:95962127:C:G	C	G	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr5	95962136	95962137	chr5:95962137:G:T	rs373369237	G	T	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr5	96572676	96572677	chr5:96572677:A:G	rs12520714	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.49200941844807	2.5203297654273293	CCCAATTACA
chr5	96699336	96699337	chr5:96699337:G:C	rs185418979	G	C	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	96757285	96757286	chr5:96757286:A:G	rs28081	A	G	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	96861379	96861380	chr5:96861380:G:A	chr5:96861380:G:A	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr5	96895873	96895874	chr5:96895874:A:C	rs17407513	A	C	A	Alx1.mouse_homeodomain_1	5	1	-	8.723290559459702	2.4343113247567425	CCTAATTAAC
chr5	97509648	97509649	chr5:97509649:G:A	rs6893784	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	97576664	97576665	chr5:97576665:G:T	rs12655664	G	T	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	97923144	97923145	chr5:97923145:A:G	rs1423317	A	G	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr5	98076657	98076658	chr5:98076658:G:A	rs35071351	G	A	.	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	98510621	98510622	chr5:98510622:G:A	rs4601066	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	98528347	98528348	chr5:98528348:C:G	rs10478691	C	G	C	Alx1.mouse_homeodomain_1	0	1	+	8.1279520552385	7.359655070879218	CCCAATTAAA
chr5	98772430	98772431	chr5:98772431:G:A	rs1818348	G	A	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	98772436	98772437	chr5:98772437:G:C	rs1403714703	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	99773443	99773444	chr5:99773444:T:C	rs116764694	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	100049468	100049469	chr5:100049469:T:C	chr5:100049469:T:C	T	C	-	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr5	100049473	100049474	chr5:100049474:T:C	rs1478020406	T	C	-	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	101429203	101429204	chr5:101429204:A:C	rs75736276	A	C	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	101436589	101436590	chr5:101436590:G:A	rs348434	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	101755065	101755066	chr5:101755066:T:C	rs6596120	T	C	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	102101245	102101246	chr5:102101246:C:T	rs1600020	C	T	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr5	102763120	102763121	chr5:102763121:A:C	rs75900556	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.981982082767747	4.851569388837285	CCTAATTAAA
chr5	103724689	103724690	chr5:103724690:G:C	rs17393709	G	C	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	104733504	104733505	chr5:104733505:C:T	rs190593360	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	105380315	105380316	chr5:105380316:C:T	rs6868669	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	106000040	106000041	chr5:106000041:G:A	rs150639260	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr5	106965002	106965003	chr5:106965003:C:A	chr5:106965003:C:A	C	A	C	Alx1.mouse_homeodomain_1	9	1	+	8.305181923889696	8.563873447197741	CTTAATTAAC
chr5	107011849	107011850	chr5:107011850:T:C	rs10062690	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr5	107185201	107185202	chr5:107185202:C:T	rs1820021	C	T	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	108419001	108419002	chr5:108419002:A:G	rs115455317	A	G	a	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr5	109534039	109534040	chr5:109534040:A:C	rs17420059	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	109844448	109844449	chr5:109844449:A:G	rs74450018	A	G	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	110256375	110256376	chr5:110256376:T:G	rs116714593	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	9.417472771290461	3.1284935365875017	TCTAATTAGA
chr5	110769778	110769779	chr5:110769779:T:A	rs62375513	T	A	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	111167679	111167680	chr5:111167680:C:T	rs10063014	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.147095123247572	CCCAATTACA
chr5	111302191	111302192	chr5:111302192:T:A	rs6887670	T	A	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	111562628	111562629	chr5:111562629:T:C	rs591871	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr5	111916954	111916955	chr5:111916955:G:A	rs4957992	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	111984129	111984130	chr5:111984130:G:A	rs146147674	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	112174909	112174910	chr5:112174910:G:T	rs1981954	G	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	112741749	112741750	chr5:112741750:T:A	rs4705608	T	A	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr5	113072479	113072480	chr5:113072480:C:T	rs11750093	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	113099922	113099923	chr5:113099923:T:G	rs6882155	T	G	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	113118746	113118747	chr5:113118747:A:G	rs77672799	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr5	113178774	113178775	chr5:113178775:G:A	rs75304664	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr5	113660326	113660327	chr5:113660327:G:A	rs35112652	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr5	114859891	114859892	chr5:114859892:T:C	rs113735411	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	115056710	115056711	chr5:115056711:C:A	rs4235768	C	A	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	115625265	115625266	chr5:115625266:G:T	rs10069695	G	T	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	115930297	115930298	chr5:115930298:C:T	rs6890690	C	T	-	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr5	115930376	115930377	chr5:115930377:C:T	rs6890722	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	115987124	115987125	chr5:115987125:G:A	rs10519435	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	116076902	116076903	chr5:116076903:A:G	rs56953556	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.312052953791037	7.458022926261789	TCTAATTATC
chr5	117352153	117352154	chr5:117352154:T:G	rs62380374	T	G	G	Alx1.mouse_homeodomain_1	8	1	+	8.312052953791037	9.158781247982416	TCTAATTATC
chr5	118550203	118550204	chr5:118550204:A:C	rs7448528	A	C	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	118565388	118565389	chr5:118565389:T:A	rs6894514	T	A	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	118905287	118905288	chr5:118905288:G:A	rs17144807	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	119161320	119161321	chr5:119161321:G:C	rs6595176	G	C	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr5	119288494	119288495	chr5:119288495:G:A	rs905831	G	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	119308351	119308352	chr5:119308352:G:T	rs111957263	G	T	G	Alx1.mouse_homeodomain_1	8	1	+	8.74067261241241	7.893944318221031	TTTAATTAGC
chr5	120289710	120289711	chr5:120289711:T:A	rs4431373	T	A	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr5	120460069	120460070	chr5:120460070:A:T	rs6883068	A	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	120618814	120618815	chr5:120618815:C:G	rs13173880	C	G	G	Alx1.mouse_homeodomain_1	0	1	+	7.735131894130908	6.9668349097716264	CCCAATTAGC
chr5	120803455	120803456	chr5:120803456:A:G	rs111873653	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	8.061628744770331	2.134724757610268	TCCAATTACA
chr5	120803464	120803465	chr5:120803465:A:T	rs1201377156	A	T	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	121199191	121199192	chr5:121199192:G:A	rs17448997	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	121425321	121425322	chr5:121425322:T:A	rs1428701	T	A	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	122760467	122760468	chr5:122760468:A:G	rs10040711	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	123177004	123177005	chr5:123177005:C:T	rs163041	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr5	123361736	123361737	chr5:123361737:C:T	rs17473412	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	123671314	123671315	chr5:123671315:C:T	rs6898183	C	T	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	123752955	123752956	chr5:123752956:T:C	rs3849049	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	123756541	123756542	chr5:123756542:T:A	rs4836038	T	A	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	124232700	124232701	chr5:124232701:C:T	chr5:124232701:C:T	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	124398747	124398748	chr5:124398748:T:C	rs895298	T	C	C	Alx1.mouse_homeodomain_1	7	1	-	8.087347922669274	2.1604439355092095	CCTAATTACC
chr5	124584390	124584391	chr5:124584391:C:T	rs9968667	C	T	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	124652428	124652429	chr5:124652429:C:G	rs76096598	C	G	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr5	124747343	124747344	chr5:124747344:G:A	rs923283614	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr5	125187092	125187093	chr5:125187093:A:G	chr5:125187093:A:G	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	125195400	125195401	chr5:125195401:A:G	rs34649431	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr5	125196699	125196700	chr5:125196700:C:T	rs17152397	C	T	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	125196729	125196730	chr5:125196730:T:C	rs10519804	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	125408837	125408838	chr5:125408838:C:T	rs186083741	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.1279520552385	8.981982082767747	CCCAATTAAA
chr5	125485444	125485445	chr5:125485445:G:A	rs116359181	G	A	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	125877535	125877536	chr5:125877536:T:C	rs167865	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	126454028	126454029	chr5:126454029:A:G	rs4276403	A	G	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	126758652	126758653	chr5:126758653:G:A	rs73333419	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	127365497	127365498	chr5:127365498:G:A	rs17165035	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	127753134	127753135	chr5:127753135:C:G	rs116572994	C	G	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	127753145	127753146	chr5:127753146:G:C	rs790839	G	C	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr5	128473719	128473720	chr5:128473720:C:T	rs11949017	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.233317895140026	6.81520925957002	CCCAATTACC
chr5	128967332	128967333	chr5:128967333:G:A	rs2577546	G	A	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	128995528	128995529	chr5:128995529:A:G	rs73784819	A	G	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr5	129142671	129142672	chr5:129142672:A:G	rs12657592	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	129223342	129223343	chr5:129223343:A:G	rs6889285	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr5	129398314	129398315	chr5:129398315:C:G	rs12187568	C	G	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	129460690	129460691	chr5:129460691:T:A	rs115425772	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	130697255	130697256	chr5:130697256:C:T	rs79265393	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	130754174	130754175	chr5:130754175:T:G	rs980812064	T	G	-	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	131164059	131164060	chr5:131164060:T:A	rs73786611	T	A	t	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	131164064	131164065	chr5:131164065:T:C	rs73786612	T	C	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	132236867	132236868	chr5:132236868:A:G	rs4535443	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	132668393	132668394	chr5:132668394:G:T	rs2243300	G	T	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr5	132672951	132672952	chr5:132672952:T:G	rs2243248	T	G	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	132944973	132944974	chr5:132944974:C:A	rs13185394	C	A	N	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	133128856	133128857	chr5:133128857:G:A	rs12513436	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	133426436	133426437	chr5:133426437:C:T	rs184574000	C	T	c	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr5	133459556	133459557	chr5:133459557:T:A	rs187425	T	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	133953246	133953247	chr5:133953247:C:G	rs56412247	C	G	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	133953254	133953255	chr5:133953255:T:C	rs28379340	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr5	134548360	134548361	chr5:134548361:T:G	rs1036867566	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.874801250211958	4.05966885732802	TTTAATTAAC
chr5	135150927	135150928	chr5:135150928:G:A	rs6890909	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr5	135187286	135187287	chr5:135187287:G:A	rs2059780	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	135310539	135310540	chr5:135310540:T:C	chr5:135310540:T:C	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.061628744770331	5.1645342354339565	TCCAATTACA
chr5	135332792	135332793	chr5:135332793:G:T	rs4976289	G	T	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	135400167	135400168	chr5:135400168:G:A	rs2617260	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.656967248991535	8.312052953791037	TCTAATTACC
chr5	135741405	135741406	chr5:135741406:C:T	rs34986053	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	135942413	135942414	chr5:135942414:T:C	rs31545	T	C	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	136138135	136138136	chr5:136138136:T:C	rs7707640	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.981982082767747	8.298017703190137	CCTAATTAAA
chr5	136810578	136810579	chr5:136810579:C:A	rs140316623	C	A	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	136810596	136810597	chr5:136810597:C:T	rs1325677641	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.304751220453168	7.886642584883163	TCCAATTAGC
chr5	137260894	137260895	chr5:137260895:G:A	rs2916636	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	137583402	137583403	chr5:137583403:G:A	rs6596395	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	137594874	137594875	chr5:137594875:G:A	rs6892472	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	138023400	138023401	chr5:138023401:C:A	rs114422921	C	A	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	138242159	138242160	chr5:138242160:T:C	rs551381201	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	139593758	139593759	chr5:139593759:T:C	rs355147	T	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr5	139711124	139711125	chr5:139711125:A:G	rs1158299502	A	G	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	140144277	140144278	chr5:140144278:A:G	rs74725681	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.233317895140026	2.2616382421192847	CCCAATTACC
chr5	140293498	140293499	chr5:140293499:T:C	rs13159261	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	141040638	141040639	chr5:141040639:C:T	rs31745	C	T	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	141508936	141508937	chr5:141508937:G:T	rs764041162	G	T	G	Alx1.mouse_homeodomain_1	0	1	-	8.723290559459702	8.075112025548904	CCTAATTAAC
chr5	141585899	141585900	chr5:141585900:A:T	rs12717895	A	T	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	141585911	141585912	chr5:141585912:G:A	rs72792314	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	142124273	142124274	chr5:142124274:A:G	rs6877864	A	G	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	142124304	142124305	chr5:142124305:T:A	rs6882226	T	A	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	142185079	142185080	chr5:142185080:A:G	rs2961693	A	G	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	142185109	142185110	chr5:142185110:C:G	rs144672246	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	142698297	142698298	chr5:142698298:T:C	rs1860230	T	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	142786120	142786121	chr5:142786121:C:T	rs140275712	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	143220962	143220963	chr5:143220963:A:G	rs17100165	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	143445738	143445739	chr5:143445739:T:A	rs7720743	T	A	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	143835367	143835368	chr5:143835368:A:G	rs77979204	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr5	144309072	144309073	chr5:144309073:A:G	rs1422715	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	144463959	144463960	chr5:144463960:T:C	rs76602490	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	144598446	144598447	chr5:144598447:T:C	rs17702948	T	C	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	144598458	144598459	chr5:144598459:A:G	rs553569709	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	145432896	145432897	chr5:145432897:T:C	rs7718608	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	145511273	145511274	chr5:145511274:A:G	rs12657926	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	145926202	145926203	chr5:145926203:G:A	rs6873171	G	A	g	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	145926224	145926225	chr5:145926225:G:A	rs73310116	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	146095020	146095021	chr5:146095021:G:A	rs67829086	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	146645651	146645652	chr5:146645652:G:A	rs17104961	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	146901961	146901962	chr5:146901962:T:C	rs567116	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	147349398	147349399	chr5:147349399:A:G	rs17482628	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.061628744770331	3.0899490917495904	TCCAATTACA
chr5	148121319	148121320	chr5:148121320:C:T	rs6883868	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	148121352	148121353	chr5:148121353:C:T	rs6580524	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	148297888	148297889	chr5:148297889:G:A	rs79129780	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	148342752	148342753	chr5:148342753:T:C	rs17719873	T	C	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	148491910	148491911	chr5:148491911:C:T	rs114575049	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	148491944	148491945	chr5:148491945:A:G	rs34070447	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	148629027	148629028	chr5:148629028:C:T	rs35782901	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	148859405	148859406	chr5:148859406:A:G	rs6580585	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr5	148922081	148922082	chr5:148922082:A:G	rs1974657	A	G	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	148922094	148922095	chr5:148922095:T:C	rs1974656	T	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	149243534	149243535	chr5:149243535:A:G	rs10067047	A	G	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr5	149452762	149452763	chr5:149452763:T:C	rs4705073	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.69757138156076	3.70984946529178	TCCAATTAAA
chr5	149456147	149456148	chr5:149456148:G:C	chr5:149456148:G:C	G	C	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	149761193	149761194	chr5:149761194:A:G	rs7735347	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	150050234	150050235	chr5:150050235:C:G	rs141993103	C	G	c	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	150488321	150488322	chr5:150488322:C:A	rs12519213	C	A	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr5	150758565	150758566	chr5:150758566:T:C	rs949832922	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	150758588	150758589	chr5:150758589:G:C	rs148190729	G	C	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr5	150758592	150758593	chr5:150758593:C:T	rs957819996	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr5	151924124	151924125	chr5:151924125:T:A	rs72802240	T	A	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	152475048	152475049	chr5:152475049:T:G	rs28374977	T	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr5	152688368	152688369	chr5:152688369:G:A	rs2964252	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr5	152853084	152853085	chr5:152853085:C:G	rs4533946	C	G	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	153258477	153258478	chr5:153258478:C:A	rs2349576	C	A	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	153312268	153312269	chr5:153312269:A:T	rs72799219	A	T	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr5	153341424	153341425	chr5:153341425:G:A	rs17583883	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	154162457	154162458	chr5:154162458:C:G	chr5:154162458:C:G	C	G	C	Alx1.mouse_homeodomain_1	0	1	+	7.993823417438953	7.225526433079671	CCCAATTAGA
chr5	154260911	154260912	chr5:154260912:G:A	rs2434532	G	A	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr5	154262484	154262485	chr5:154262485:T:G	rs2443522	T	G	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	154309890	154309891	chr5:154309891:G:C	rs17629424	G	C	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	154618555	154618556	chr5:154618556:C:T	rs62380476	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	154618561	154618562	chr5:154618562:G:A	rs11167691	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	154819498	154819499	chr5:154819499:A:G	rs77412577	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	154849705	154849706	chr5:154849706:C:T	rs141295372	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	155004467	155004468	chr5:155004468:T:C	rs77656625	T	C	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	155076497	155076498	chr5:155076498:C:A	rs28482784	C	A	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	155190003	155190004	chr5:155190004:C:G	rs76207230	C	G	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	155839748	155839749	chr5:155839749:T:G	rs114494964	T	G	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr5	156480476	156480477	chr5:156480477:A:G	rs4704804	A	G	G	Alx1.mouse_homeodomain_1	8	1	+	9.551601409090008	9.417472771290461	TCTAATTAAA
chr5	156574537	156574538	chr5:156574538:C:T	rs17640369	C	T	c	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	157050819	157050820	chr5:157050820:G:A	rs17573010	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	157205110	157205111	chr5:157205111:A:G	rs246856	A	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	157685144	157685145	chr5:157685145:G:A	rs74937798	G	A	g	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr5	158277135	158277136	chr5:158277136:C:A	rs1145606	C	A	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	158595032	158595033	chr5:158595033:A:G	rs2434612	A	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr5	159021505	159021506	chr5:159021506:T:C	rs80009144	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr5	159042091	159042092	chr5:159042092:T:A	rs17056476	T	A	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	159516255	159516256	chr5:159516256:C:T	rs182324554	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	159516272	159516273	chr5:159516273:A:G	rs7721713	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	8.74067261241241	7.886642584883163	TTTAATTAGC
chr5	159538766	159538767	chr5:159538767:G:A	rs10476298	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	8.874801250211958	8.138185647757648	TTTAATTAAC
chr5	159774448	159774449	chr5:159774449:G:T	rs543941716	G	T	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr5	159942256	159942257	chr5:159942257:C:T	rs4921099	C	T	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr5	160106175	160106176	chr5:160106176:G:A	rs73313104	G	A	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr5	160170280	160170281	chr5:160170281:A:T	rs2546363	A	T	A	Alx1.mouse_homeodomain_1	4	1	+	9.292909885781963	4.218141339044058	TCTAATTAAC
chr5	160287520	160287521	chr5:160287521:T:C	rs2303059	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	160306705	160306706	chr5:160306706:T:C	rs13180487	T	C	t	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	160420072	160420073	chr5:160420073:G:A	rs2910199	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	160442449	160442450	chr5:160442450:T:C	rs2910207	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	160619490	160619491	chr5:160619491:A:G	rs1421963	A	G	a	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	160638184	160638185	chr5:160638185:A:G	rs74616847	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	160926756	160926757	chr5:160926757:C:A	rs78196883	C	A	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	161295606	161295607	chr5:161295607:T:A	rs72811499	T	A	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	162289303	162289304	chr5:162289304:A:G	rs7724094	A	G	A	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	163106021	163106022	chr5:163106022:T:A	rs4604210	T	A	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr5	163460507	163460508	chr5:163460508:A:G	rs111450234	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	163546325	163546326	chr5:163546326:A:G	rs4869091	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr5	164090589	164090590	chr5:164090590:A:G	rs10463141	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr5	164281036	164281037	chr5:164281037:A:G	rs2915846	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	164446899	164446900	chr5:164446900:C:A	rs9314026	C	A	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	165135428	165135429	chr5:165135429:C:T	rs76004195	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.869260531930455	8.438879858252715	CCCAATTAAC
chr5	166782139	166782140	chr5:166782140:A:C	rs74815225	A	C	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	166782174	166782175	chr5:166782175:G:T	rs56093615	G	T	G	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	167332724	167332725	chr5:167332725:G:A	rs141922451	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	8.589161921660155	8.723290559459702	CCTAATTAGC
chr5	167406181	167406182	chr5:167406182:G:T	rs55786063	G	T	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr5	167939009	167939010	chr5:167939010:A:G	rs112460288	A	G	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr5	168042804	168042805	chr5:168042805:A:T	rs1862418	A	T	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	168110954	168110955	chr5:168110955:A:G	rs140059051	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	168210587	168210588	chr5:168210588:A:G	rs9918152	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	168233756	168233757	chr5:168233757:T:C	rs2161301	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	168364447	168364448	chr5:168364448:C:T	rs11960586	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr5	168428581	168428582	chr5:168428582:A:T	rs563731462	A	T	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	168881646	168881647	chr5:168881647:T:C	rs1875975	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr5	169068005	169068006	chr5:169068006:G:T	rs898574412	G	T	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	169335618	169335619	chr5:169335619:A:T	rs570953078	A	T	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	169543500	169543501	chr5:169543501:A:C	rs255827	A	C	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr5	169585535	169585536	chr5:169585536:C:T	rs73314512	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr5	169754453	169754454	chr5:169754454:A:G	rs262859	A	G	g	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr5	170308319	170308320	chr5:170308320:T:C	rs17739586	T	C	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr5	170369821	170369822	chr5:170369822:G:A	rs7726887	G	A	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr5	170507150	170507151	chr5:170507151:G:A	rs7734834	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	170534202	170534203	chr5:170534203:T:A	rs9313507	T	A	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	170554972	170554973	chr5:170554973:G:A	rs146468327	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	171399416	171399417	chr5:171399417:A:G	rs57232631	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	171462737	171462738	chr5:171462738:G:A	rs182561038	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	171808009	171808010	chr5:171808010:C:T	rs1529703	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr5	172557909	172557910	chr5:172557910:A:C	rs1433019	A	C	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr5	172830576	172830577	chr5:172830577:G:A	rs149005755	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.869260531930455	8.723290559459702	CCCAATTAAC
chr5	172887087	172887088	chr5:172887088:A:G	rs693557	A	G	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr5	173011355	173011356	chr5:173011356:T:A	rs10062071	T	A	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	173299615	173299616	chr5:173299616:A:G	rs1001336	A	G	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr5	173299632	173299633	chr5:173299633:G:T	rs4242169	G	T	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	173326677	173326678	chr5:173326678:G:A	rs77127337	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr5	173515455	173515456	chr5:173515456:T:C	rs1422772	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	173701417	173701418	chr5:173701418:G:T	rs2561053	G	T	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	173778496	173778497	chr5:173778497:G:T	rs4867729	G	T	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr5	174093262	174093263	chr5:174093263:T:C	chr5:174093263:T:C	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	7.9549935751004215	5.057899065764045	GCTAATTAAC
chr5	174150879	174150880	chr5:174150880:G:A	rs11956829	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	174501958	174501959	chr5:174501959:C:T	rs354991	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	174531800	174531801	chr5:174531801:G:A	rs76808365	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	174531817	174531818	chr5:174531818:T:C	rs2242417	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr5	174875288	174875289	chr5:174875289:G:A	rs396585	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	8.422165645528107	TCTAATTAGC
chr5	175494166	175494167	chr5:175494167:C:T	rs6874723	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	175602270	175602271	chr5:175602271:A:G	rs870258	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	3.022143764418211	CCCAATTAGA
chr5	175936128	175936129	chr5:175936129:T:C	rs62389151	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	176851523	176851524	chr5:176851524:A:T	rs12055367	A	T	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr5	177930944	177930945	chr5:177930945:C:T	rs113821938	C	T	.	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	177930962	177930963	chr5:177930963:A:G	rs4958980	A	G	.	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	178100703	178100704	chr5:178100704:T:A	rs185796310	T	A	.	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	178424688	178424689	chr5:178424689:C:T	rs17648414	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr5	178532740	178532741	chr5:178532741:A:G	rs647505	A	G	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	178553042	178553043	chr5:178553043:G:A	rs116641719	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr5	178553048	178553049	chr5:178553049:G:C	rs114006762	G	C	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr5	179023462	179023463	chr5:179023463:T:C	rs113322031	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr5	179023547	179023548	chr5:179023548:C:T	rs111571601	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	179242295	179242296	chr5:179242296:C:T	rs338875	C	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr5	179544576	179544577	chr5:179544577:A:T	rs76749604	A	T	a	Alx1.mouse_homeodomain_1	7	1	+	8.1279520552385	5.409957033031244	CCCAATTAAA
chr5	179709135	179709136	chr5:179709136:C:T	rs72809766	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	179709136	179709137	chr5:179709137:A:G	rs6601068	A	G	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	179766827	179766828	chr5:179766828:G:A	rs757309924	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	179912838	179912839	chr5:179912839:G:A	rs78986900	G	A	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	180009498	180009499	chr5:180009499:A:G	rs6869349	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	9.417472771290461	6.8106528814417695	TCTAATTAGA
chr5	180134944	180134945	chr5:180134945:A:G	rs13159466	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	7.802937221462287	5.196117331613596	TCCAATTACC
chr5	180184286	180184287	chr5:180184287:G:A	rs9329099	G	A	g	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr5	180515394	180515395	chr5:180515395:C:T	rs2453179	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr5	181217060	181217061	chr5:181217061:A:T	rs535859368	A	T	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	219298	219299	chr6:219299:A:C	rs12204071	A	C	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	257500	257501	chr6:257501:G:A	rs191706510	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	257511	257512	chr6:257512:G:T	rs115673084	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	8.589161921660155	8.8478534449682	CCTAATTAGC
chr6	884785	884786	chr6:884786:T:C	rs148640816	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr6	1153449	1153450	chr6:1153450:T:A	rs1929470	T	A	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	1612211	1612212	chr6:1612212:C:A	rs116336796	C	A	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	2205571	2205572	chr6:2205572:G:A	rs6908269	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	2441916	2441917	chr6:2441917:G:A	rs983028	G	A	A	Alx1.mouse_homeodomain_1	1	1	-	8.867637029512398	8.449528393942392	TCTAATTAAG
chr6	2600012	2600013	chr6:2600013:T:C	rs2054638	T	C	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	3832091	3832092	chr6:3832092:A:T	rs3734221	A	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr6	4361943	4361944	chr6:4361944:G:T	rs9504062	G	T	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	4638964	4638965	chr6:4638965:T:C	rs234407	T	C	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	4777315	4777316	chr6:4777316:G:C	rs76149946	G	C	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	4928152	4928153	chr6:4928153:A:G	rs1112267	A	G	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr6	5103051	5103052	chr6:5103052:T:C	rs466368	T	C	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	5103061	5103062	chr6:5103062:T:A	rs466369	T	A	A	Alx1.mouse_homeodomain_1	3	1	-	8.422165645528107	4.694684371836499	TCTAATTAGT
chr6	5107620	5107621	chr6:5107621:A:G	rs74851950	A	G	a	Alx1.mouse_homeodomain_1	4	1	+	7.309859037861343	2.338179384840601	CCCAATTAGG
chr6	5709102	5709103	chr6:5709103:G:A	rs7740727	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	8.422165645528107	TCTAATTAGC
chr6	5752468	5752469	chr6:5752469:C:T	rs113616715	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.304751220453168	7.568135617998859	TCCAATTAGC
chr6	6009614	6009615	chr6:6009615:T:G	rs3763180	T	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	6058541	6058542	chr6:6058542:A:G	rs6928498	A	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	6152174	6152175	chr6:6152175:C:A	rs3024457	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.8478534449682	8.199674911057402	CCTAATTAGA
chr6	6201281	6201282	chr6:6201282:A:C	rs7746985	A	C	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	6314348	6314349	chr6:6314349:G:C	rs1781790	G	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	6637576	6637577	chr6:6637577:G:C	rs3804484	G	C	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr6	6724751	6724752	chr6:6724752:G:A	rs9379058	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	6724761	6724762	chr6:6724762:T:C	rs78677477	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	6724772	6724773	chr6:6724773:A:G	rs75267503	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.061628744770331	5.454808854921641	TCCAATTACA
chr6	6901622	6901623	chr6:6901623:T:C	rs9379066	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	7414505	7414506	chr6:7414506:C:T	rs2296258	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	8084550	8084551	chr6:8084551:T:G	chr6:8084551:T:G	T	G	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	8100423	8100424	chr6:8100424:A:C	rs151157078	A	C	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr6	8736513	8736514	chr6:8736514:T:G	rs72831713	T	G	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr6	8865744	8865745	chr6:8865745:T:C	rs143758330	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	8865765	8865766	chr6:8865766:G:A	rs151278445	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	9496942	9496943	chr6:9496943:C:T	rs71561167	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr6	9835194	9835195	chr6:9835195:A:G	rs13213170	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr6	10014700	10014701	chr6:10014701:A:G	rs201246	A	G	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	10105692	10105693	chr6:10105693:C:A	chr6:10105693:C:A	C	A	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	10391080	10391081	chr6:10391081:T:C	rs580416	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	10416230	10416231	chr6:10416231:A:G	rs45446198	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	10455243	10455244	chr6:10455244:T:C	rs35076407	T	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	10513067	10513068	chr6:10513068:A:T	rs77466784	A	T	A	Alx1.mouse_homeodomain_1	2	1	-	8.981982082767747	6.8891381794585085	CCTAATTAAA
chr6	10531952	10531953	chr6:10531953:C:T	rs681282	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	10657713	10657714	chr6:10657714:A:G	chr6:10657714:A:G	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	10657713	10657714	chr6:10657714:A:T	rs56196505	A	T	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	10809360	10809361	chr6:10809361:G:A	rs9379796	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	11430347	11430348	chr6:11430348:C:A	rs115144752	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	11456984	11456985	chr6:11456985:G:A	rs55887924	G	A	g	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	11750285	11750286	chr6:11750286:G:A	rs2235410	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	11754824	11754825	chr6:11754825:C:T	rs116168042	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr6	11754866	11754867	chr6:11754867:A:T	rs9380504	A	T	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	11974408	11974409	chr6:11974409:C:G	rs2327463	C	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr6	12411059	12411060	chr6:12411060:G:A	rs12206153	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	12439222	12439223	chr6:12439223:C:T	rs9369351	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	7.802937221462287	8.656967248991535	TCCAATTACC
chr6	13279634	13279635	chr6:13279635:T:A	rs405078	T	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	13422160	13422161	chr6:13422161:C:T	rs2119482	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	13422171	13422172	chr6:13422172:C:A	rs2119481	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.01360700198315	6.420295075815367	TCCAATTAAG
chr6	13481242	13481243	chr6:13481243:G:C	rs9382135	G	C	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	14665285	14665286	chr6:14665286:T:C	rs2092918	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	14816279	14816280	chr6:14816280:C:A	rs233484	C	A	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	14913736	14913737	chr6:14913737:C:T	rs6930513	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	15109543	15109544	chr6:15109544:T:C	rs9349965	T	C	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	15377227	15377228	chr6:15377228:T:A	rs2299058	T	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	15462639	15462640	chr6:15462640:C:T	rs11759978	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr6	15470623	15470624	chr6:15470624:T:G	rs9370816	T	G	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr6	15470624	15470625	chr6:15470625:T:A	rs6929454	T	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr6	15820193	15820194	chr6:15820194:C:T	rs522264	C	T	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr6	16205952	16205953	chr6:16205953:A:C	rs189493148	A	C	A	Alx1.mouse_homeodomain_1	4	1	+	9.551601409090008	4.089834758368853	TCTAATTAAA
chr6	16420890	16420891	chr6:16420891:G:C	rs17651969	G	C	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	17015559	17015560	chr6:17015560:G:A	rs72829891	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	17107915	17107916	chr6:17107916:G:A	rs7758868	G	A	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	17354802	17354803	chr6:17354803:A:T	rs184908985	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	7.8208649373008745	4.093383663609266	GCTAATTAGC
chr6	17394813	17394814	chr6:17394814:A:T	rs560052515	A	T	A	Alx1.mouse_homeodomain_1	9	1	+	9.417472771290461	8.422165645528107	TCTAATTAGA
chr6	17446291	17446292	chr6:17446292:G:A	rs910042	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	17536355	17536356	chr6:17536356:T:C	rs114130778	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr6	17860896	17860897	chr6:17860897:T:C	rs607690	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr6	17867195	17867196	chr6:17867196:C:T	rs589764	C	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	18753150	18753151	chr6:18753151:G:A	rs17646843	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr6	18936186	18936187	chr6:18936187:T:G	rs1343140	T	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	19220452	19220453	chr6:19220453:T:C	rs9465283	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.17105328609015	7.317023258560902	CTTAATTAGC
chr6	20126424	20126425	chr6:20126425:C:T	rs2483766	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr6	20724865	20724866	chr6:20724866:T:A	rs9356748	T	A	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	20802867	20802868	chr6:20802868:T:A	rs4710950	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	8.69757138156076	5.979576359353505	TCCAATTAAA
chr6	21401529	21401530	chr6:21401530:C:T	rs7742386	C	T	T	Alx1.mouse_homeodomain_1	0	1	+	8.589161921660155	9.158781247982416	CCTAATTAGC
chr6	21599468	21599469	chr6:21599469:A:G	rs9466124	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	21929616	21929617	chr6:21929617:T:C	rs12201386	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	22333859	22333860	chr6:22333860:T:C	rs860305	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	22800391	22800392	chr6:22800392:C:G	rs10484712	C	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	22892918	22892919	chr6:22892919:A:C	rs2498225	A	C	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	23223258	23223259	chr6:23223259:A:G	rs9348551	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.69757138156076	3.70984946529178	TCCAATTAAA
chr6	23633868	23633869	chr6:23633869:C:T	rs2145771	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	23656678	23656679	chr6:23656679:C:T	rs186614116	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	24324080	24324081	chr6:24324081:T:A	rs62400442	T	A	T	Alx1.mouse_homeodomain_1	4	1	-	8.01360700198315	2.938838455245246	TCCAATTAAG
chr6	24500900	24500901	chr6:24500901:T:G	rs4646834	T	G	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	24881649	24881650	chr6:24881650:C:T	rs13193774	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr6	24909296	24909297	chr6:24909297:T:C	rs114602564	T	C	t	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	24909298	24909299	chr6:24909299:A:T	rs35374042	A	T	a	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	25290955	25290956	chr6:25290956:A:G	rs12205303	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	26055375	26055376	chr6:26055376:T:C	rs954381952	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr6	26106008	26106009	chr6:26106009:G:T	rs707891	G	T	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr6	26124005	26124006	chr6:26124006:A:G	rs549319040	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	26124014	26124015	chr6:26124015:G:A	rs198820	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	26128639	26128640	chr6:26128640:G:A	rs79213089	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	26157732	26157733	chr6:26157733:A:G	rs183166420	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr6	26159104	26159105	chr6:26159105:C:G	chr6:26159105:C:G	C	G	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	26183575	26183576	chr6:26183576:A:C	rs1359129464	A	C	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	26183587	26183588	chr6:26183588:G:A	rs17533076	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.723290559459702	8.305181923889696	CCTAATTAAC
chr6	26323363	26323364	chr6:26323364:G:C	rs11752120	G	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	26569737	26569738	chr6:26569738:G:C	rs73738495	G	C	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	27333732	27333733	chr6:27333733:T:A	rs56401801	T	A	t	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	27375340	27375341	chr6:27375341:T:G	rs143152703	T	G	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	28648312	28648313	chr6:28648313:C:T	rs143333366	C	T	c	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr6	28895691	28895692	chr6:28895692:G:A	rs209140	G	A	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	29513215	29513216	chr6:29513216:T:C	rs3094572	T	C	C	Alx1.mouse_homeodomain_1	2	1	+	8.17105328609015	7.317023258560902	CTTAATTAGC
chr6	29516133	29516134	chr6:29516134:C:T	rs1592411	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	29750387	29750388	chr6:29750388:T:C	rs2517934	T	C	t	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr6	29750504	29750505	chr6:29750505:A:G	rs733840	A	G	g	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	29770509	29770510	chr6:29770510:A:G	rs1611270	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.061628744770331	3.0899490917495904	TCCAATTACA
chr6	29770520	29770521	chr6:29770521:G:T	rs1611271	G	T	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	29796596	29796597	chr6:29796597:A:T	rs1633006	A	T	-	Alx1.mouse_homeodomain_1	7	1	+	9.551601409090008	6.833606386882752	TCTAATTAAA
chr6	29825946	29825947	chr6:29825947:T:C	rs1632949	T	C	-	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	29915454	29915455	chr6:29915455:T:C	rs1611466	T	C	-	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	29922971	29922972	chr6:29922972:T:C	rs1611399	T	C	-	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	29924418	29924419	chr6:29924419:A:T	rs2517784	A	T	-	Alx1.mouse_homeodomain_1	7	1	+	8.74067261241241	6.022677590205155	TTTAATTAGC
chr6	29924425	29924426	chr6:29924426:C:A	rs1611422	C	A	-	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr6	29924429	29924430	chr6:29924430:G:T	rs113421766	G	T	-	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	29967627	29967628	chr6:29967628:C:T	rs3893463	C	T	-	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	30000648	30000649	chr6:30000649:C:T	rs356961	C	T	-	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	30000677	30000678	chr6:30000678:C:T	rs10947042	C	T	-	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	30047620	30047621	chr6:30047621:A:G	rs375426655	A	G	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr6	30074279	30074280	chr6:30074280:G:A	rs11965540	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	7.852546319205846	8.422165645528107	CCTAATTAGT
chr6	30111351	30111352	chr6:30111352:T:C	rs2523988	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr6	30134172	30134173	chr6:30134173:T:G	rs9261461	T	G	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	30528382	30528383	chr6:30528383:A:G	rs2534824	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	30541686	30541687	chr6:30541687:T:G	chr6:30541687:T:G	T	G	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	30739164	30739165	chr6:30739165:C:T	rs80126811	C	T	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	30820573	30820574	chr6:30820574:T:A	rs12192205	T	A	T	Alx1.mouse_homeodomain_1	6	1	+	8.723290559459702	5.491513612130439	CCTAATTAAC
chr6	30914728	30914729	chr6:30914729:T:C	rs193150789	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	9.158781247982416	6.551961358133725	TCTAATTAGC
chr6	30914735	30914736	chr6:30914736:A:G	rs1264303	A	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	31053547	31053548	chr6:31053548:T:C	rs2428516	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	31117922	31117923	chr6:31117923:C:T	rs3130988	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	31121347	31121348	chr6:31121348:A:G	rs3132545	A	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	31209641	31209642	chr6:31209642:A:G	rs9501517	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.422165645528107	3.4504859925073648	TCTAATTAGT
chr6	31210965	31210966	chr6:31210966:T:G	rs3132504	T	G	G	Alx1.mouse_homeodomain_1	6	1	+	7.8208649373008745	3.0057325444169365	GCTAATTAGC
chr6	31238990	31238991	chr6:31238991:C:T	rs73728438	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	31383419	31383420	chr6:31383420:G:C	rs2923010	G	C	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr6	31383436	31383437	chr6:31383437:G:A	rs9266747	G	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	32432055	32432056	chr6:32432056:G:A	rs9268605	G	A	g	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr6	32473799	32473800	chr6:32473800:G:C	rs13191565	G	C	.	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	32613443	32613444	chr6:32613444:G:A	rs9271286	G	A	.	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	32613475	32613476	chr6:32613476:A:G	rs9271287	A	G	.	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr6	32613482	32613483	chr6:32613483:A:G	rs9271288	A	G	.	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	32635543	32635544	chr6:32635544:C:T	rs62404084	C	T	.	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	32663033	32663034	chr6:32663034:T:A	rs41270929	T	A	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	32663065	32663066	chr6:32663066:T:A	rs17843719	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	32665684	32665685	chr6:32665685:T:A	rs41263836	T	A	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	32665689	32665690	chr6:32665690:A:G	rs62404143	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr6	32665694	32665695	chr6:32665695:A:G	rs28746825	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.69757138156076	8.01360700198315	TCCAATTAAA
chr6	32669122	32669123	chr6:32669123:C:T	rs9274688	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	32830820	32830821	chr6:32830821:T:C	rs115303673	T	C	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	32839008	32839009	chr6:32839009:T:G	rs4713598	T	G	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr6	33123676	33123677	chr6:33123677:G:A	rs9277723	G	A	g	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	33148494	33148495	chr6:33148495:T:C	rs2395366	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	33148506	33148507	chr6:33148507:C:T	rs2894326	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.346039445977318	8.91565877229958	CCTAATTACA
chr6	33148508	33148509	chr6:33148509:T:C	rs4363078	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.346039445977318	7.49200941844807	CCTAATTACA
chr6	33700079	33700080	chr6:33700080:T:C	rs572708	T	C	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	33861047	33861048	chr6:33861048:T:C	rs34789460	T	C	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr6	34236999	34237000	chr6:34237000:A:G	rs1028551285	A	G	a	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	34256233	34256234	chr6:34256234:A:G	rs9394202	A	G	g	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	34259831	34259832	chr6:34259832:T:C	rs73419191	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	34360886	34360887	chr6:34360887:A:G	rs114338994	A	G	A	Alx1.mouse_homeodomain_1	8	1	+	8.1279520552385	7.993823417438953	CCCAATTAAA
chr6	34416057	34416058	chr6:34416058:C:T	rs762793011	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	35047718	35047719	chr6:35047719:C:T	rs150786144	C	T	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	35048179	35048180	chr6:35048180:G:A	rs73403834	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	35539778	35539779	chr6:35539779:C:G	rs4713888	C	G	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr6	35548357	35548358	chr6:35548358:A:T	rs6907931	A	T	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	35709107	35709108	chr6:35709108:T:C	rs4713918	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr6	36594831	36594832	chr6:36594832:T:G	rs190625998	T	G	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	36594833	36594834	chr6:36594834:T:C	rs115406696	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	36595119	36595120	chr6:36595120:G:A	rs143699788	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr6	36709665	36709666	chr6:36709666:A:G	rs9470376	A	G	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	36722929	36722930	chr6:36722930:T:C	rs236476	T	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	36820820	36820821	chr6:36820821:T:C	rs236379	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr6	37261508	37261509	chr6:37261509:A:G	rs9380656	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	37616119	37616120	chr6:37616120:C:T	rs17742587	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr6	37801305	37801306	chr6:37801306:C:T	rs6937655	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr6	37943119	37943120	chr6:37943120:T:G	rs6925563	T	G	T	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr6	37990889	37990890	chr6:37990890:A:T	rs1370765336	A	T	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	38935318	38935319	chr6:38935319:G:A	rs9296270	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr6	39062171	39062172	chr6:39062172:T:C	rs565350390	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr6	39143127	39143128	chr6:39143128:G:A	rs7757873	G	A	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	39143158	39143159	chr6:39143159:A:G	rs228820	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr6	39381753	39381754	chr6:39381754:G:A	rs721755	G	A	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	39981973	39981974	chr6:39981974:T:C	rs76277193	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	40542273	40542274	chr6:40542274:G:A	rs115628240	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	41247446	41247447	chr6:41247447:C:A	rs916625071	C	A	c	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	41560830	41560831	chr6:41560831:T:C	chr6:41560831:T:C	T	C	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	41592118	41592119	chr6:41592119:G:T	rs1175472405	G	T	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	41592122	41592123	chr6:41592123:C:A	rs78554297	C	A	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr6	41663991	41663992	chr6:41663992:T:G	rs6899312	T	G	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	42006004	42006005	chr6:42006005:A:T	rs12210079	A	T	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	42006005	42006006	chr6:42006006:A:T	rs4711696	A	T	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	42136410	42136411	chr6:42136411:C:T	rs12215166	C	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr6	42189653	42189654	chr6:42189654:G:A	rs59004693	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr6	42536528	42536529	chr6:42536529:T:C	rs66503605	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	42565322	42565323	chr6:42565323:A:G	rs73436624	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr6	42889467	42889468	chr6:42889468:C:T	rs7952	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr6	42907726	42907727	chr6:42907727:T:C	rs9296401	T	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	43667949	43667950	chr6:43667950:C:T	rs1013868623	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	43833610	43833611	chr6:43833611:A:G	rs189979575	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	44003089	44003090	chr6:44003090:G:A	rs2295334	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr6	44968830	44968831	chr6:44968831:A:G	rs13215618	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	45106916	45106917	chr6:45106917:A:G	rs116589751	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	45757870	45757871	chr6:45757871:G:A	rs73450761	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	45791256	45791257	chr6:45791257:G:A	rs7744773	G	A	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	45930823	45930824	chr6:45930824:A:C	rs113445052	A	C	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr6	46014333	46014334	chr6:46014334:A:G	rs9472661	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.74067261241241	6.133852722563721	TTTAATTAGC
chr6	46032520	46032521	chr6:46032521:G:T	rs1578005	G	T	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	46129351	46129352	chr6:46129352:A:G	rs139142286	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	47774172	47774173	chr6:47774173:T:G	rs1312208801	T	G	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	48641842	48641843	chr6:48641843:T:C	rs1365720	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	48735950	48735951	chr6:48735951:T:C	rs12190767	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	49550339	49550340	chr6:49550340:C:G	rs72868364	C	G	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	50188610	50188611	chr6:50188611:A:T	rs1340841	A	T	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	50827040	50827041	chr6:50827041:C:G	rs114547915	C	G	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	50952752	50952753	chr6:50952753:G:C	rs3843526	G	C	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	51302905	51302906	chr6:51302906:G:A	rs1003225	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	51949976	51949977	chr6:51949977:T:C	rs1266914	T	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	51993471	51993472	chr6:51993472:C:T	rs77855336	C	T	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	53361755	53361756	chr6:53361756:G:A	rs78692655	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr6	53361776	53361777	chr6:53361777:T:G	rs552821283	T	G	T	Alx1.mouse_homeodomain_1	8	1	-	8.723290559459702	8.087347922669274	CCTAATTAAC
chr6	53929108	53929109	chr6:53929109:T:G	chr6:53929109:T:G	T	G	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	55395557	55395558	chr6:55395558:G:T	rs16886684	G	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	55400165	55400166	chr6:55400166:C:T	rs6918921	C	T	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	55704612	55704613	chr6:55704613:G:T	rs961571	G	T	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	55999751	55999752	chr6:55999752:A:G	rs111524788	A	G	G	Alx1.mouse_homeodomain_1	5	1	-	8.981982082767747	3.994260166498766	CCTAATTAAA
chr6	56096488	56096489	chr6:56096489:T:C	rs62404894	T	C	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr6	56227382	56227383	chr6:56227383:C:T	rs552162137	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	56227387	56227388	chr6:56227388:C:T	rs3846926	C	T	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	56241174	56241175	chr6:56241175:C:T	rs12205794	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr6	56279075	56279076	chr6:56279076:G:A	rs6920090	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	56576666	56576667	chr6:56576667:C:T	rs6931836	C	T	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	57315326	57315327	chr6:57315327:C:T	rs75441032	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	58059551	58059552	chr6:58059552:G:A	rs4928437	G	A	g	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr6	58886895	58886896	chr6:58886896:T:A	rs1211052121	T	A	.	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr6	60431845	60431846	chr6:60431846:C:T	rs2397527	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	60950464	60950465	chr6:60950465:A:G	rs3125358	A	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	61618818	61618819	chr6:61618819:G:A	rs9343452	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	61652961	61652962	chr6:61652962:C:T	rs1414803	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	61817919	61817920	chr6:61817920:T:C	rs1615528	T	C	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	62091009	62091010	chr6:62091010:C:G	rs208975	C	G	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr6	64302439	64302440	chr6:64302440:T:G	rs6454782	T	G	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	64405229	64405230	chr6:64405230:T:C	rs79649990	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.305181923889696	3.3174600076207157	CTTAATTAAC
chr6	64682496	64682497	chr6:64682497:C:T	rs6454966	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	65247666	65247667	chr6:65247667:G:A	rs17580078	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	65987288	65987289	chr6:65987289:A:G	rs12206707	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	66178658	66178659	chr6:66178659:A:G	rs9345776	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.981982082767747	6.084887573431371	CCTAATTAAA
chr6	66750737	66750738	chr6:66750738:T:C	rs716140	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	67010100	67010101	chr6:67010101:G:A	rs115998000	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	67910218	67910219	chr6:67910219:T:C	rs6918745	T	C	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	68021216	68021217	chr6:68021217:C:T	rs4707479	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	8.8478534449682	8.981982082767747	CCTAATTAGA
chr6	68181147	68181148	chr6:68181148:T:C	rs368709902	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.869260531930455	5.262440642081764	CCCAATTAAC
chr6	68343898	68343899	chr6:68343899:A:G	rs9283833	A	G	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	69020181	69020182	chr6:69020182:A:T	rs7756637	A	T	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr6	69106374	69106375	chr6:69106375:G:A	rs3757051	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	69815786	69815787	chr6:69815787:A:G	rs13195232	A	G	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	70264525	70264526	chr6:70264526:G:T	rs12197540	G	T	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	70981374	70981375	chr6:70981375:A:C	rs58141580	A	C	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	71366162	71366163	chr6:71366163:A:G	rs75413280	A	G	A	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr6	71727424	71727425	chr6:71727425:T:C	rs829470	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	72076483	72076484	chr6:72076484:C:T	rs80200934	C	T	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	72417292	72417293	chr6:72417293:T:C	rs12192184	T	C	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	72634067	72634068	chr6:72634068:A:G	rs6913237	A	G	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr6	73121428	73121429	chr6:73121429:A:G	rs140598309	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.981982082767747	4.010302429747005	CCTAATTAAA
chr6	73460354	73460355	chr6:73460355:G:C	rs72960023	G	C	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	74829223	74829224	chr6:74829224:G:T	rs113148354	G	T	g	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	74932565	74932566	chr6:74932566:C:T	rs11751258	C	T	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	75148190	75148191	chr6:75148191:C:T	rs184766	C	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	75300687	75300688	chr6:75300688:G:A	rs117950079	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	75300716	75300717	chr6:75300717:C:T	rs2842461	C	T	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	75454778	75454779	chr6:75454779:T:C	rs9447486	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	76522190	76522191	chr6:76522191:T:G	rs9361081	T	G	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	76761242	76761243	chr6:76761243:T:C	rs6922845	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	76761248	76761249	chr6:76761249:T:A	rs1457954	T	A	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	77261503	77261504	chr6:77261504:A:T	rs9443391	A	T	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr6	77698227	77698228	chr6:77698228:C:G	rs7771301	C	G	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr6	78718306	78718307	chr6:78718307:G:A	rs1180819	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr6	78868790	78868791	chr6:78868791:A:G	rs113131006	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	79072614	79072615	chr6:79072615:T:C	rs55696019	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.233317895140026	2.2616382421192847	CCCAATTACC
chr6	79263720	79263721	chr6:79263721:T:G	rs7763232	T	G	G	Alx1.mouse_homeodomain_1	2	1	+	8.723290559459702	5.723793004964697	CCTAATTAAC
chr6	79435974	79435975	chr6:79435975:C:T	rs565697586	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	79764080	79764081	chr6:79764081:C:T	rs75084318	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	79808531	79808532	chr6:79808532:G:T	rs9352767	G	T	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	79901121	79901122	chr6:79901122:G:A	rs2164166	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr6	80331867	80331868	chr6:80331868:A:G	rs1159506	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.867637029512398	8.298017703190137	TCTAATTAAG
chr6	80642616	80642617	chr6:80642617:G:T	rs3889467	G	T	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr6	80764398	80764399	chr6:80764399:G:A	rs76742345	G	A	.	Alx1.mouse_homeodomain_1	1	1	-	8.8478534449682	8.429744809398194	CCTAATTAGA
chr6	81684055	81684056	chr6:81684056:G:A	rs9350934	G	A	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr6	81748921	81748922	chr6:81748922:G:T	rs7742628	G	T	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr6	81902553	81902554	chr6:81902554:A:C	rs4613862	A	C	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr6	82113052	82113053	chr6:82113053:A:G	rs7741402	A	G	A	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	82208157	82208158	chr6:82208158:T:A	rs4706941	T	A	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr6	82208186	82208187	chr6:82208187:A:C	rs4706942	A	C	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	82262352	82262353	chr6:82262353:T:C	rs495720	T	C	t	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr6	82686890	82686891	chr6:82686891:T:A	rs2574988	T	A	A	Alx1.mouse_homeodomain_1	0	1	+	9.292909885781963	8.075112025548904	TCTAATTAAC
chr6	82955064	82955065	chr6:82955065:G:A	rs59491134	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	82955107	82955108	chr6:82955108:T:C	rs77968057	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr6	83192436	83192437	chr6:83192437:C:A	rs73749740	C	A	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr6	83411993	83411994	chr6:83411994:C:G	rs3798887	C	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	83849064	83849065	chr6:83849065:C:G	rs12173431	C	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	84085531	84085532	chr6:84085532:T:C	rs73752631	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr6	84645866	84645867	chr6:84645867:A:C	rs4470818	A	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr6	84759194	84759195	chr6:84759195:T:A	rs1535049	T	A	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	85345767	85345768	chr6:85345768:C:T	rs57115758	C	T	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr6	85472807	85472808	chr6:85472808:A:C	rs111716815	A	C	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	85866738	85866739	chr6:85866739:G:A	chr6:85866739:G:A	G	A	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	86491891	86491892	chr6:86491892:C:T	rs35711517	C	T	c	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	86856600	86856601	chr6:86856601:A:G	rs9450537	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	7.8208649373008745	5.214045047452184	GCTAATTAGC
chr6	87102085	87102086	chr6:87102086:C:T	rs9294366	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	87579593	87579594	chr6:87579594:G:C	rs141112833	G	C	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr6	87700084	87700085	chr6:87700085:C:A	rs6899982	C	A	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	87714790	87714791	chr6:87714791:T:C	rs2245777	T	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	88983176	88983177	chr6:88983177:C:A	rs9362597	C	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	88984447	88984448	chr6:88984448:A:G	rs4707504	A	G	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr6	89006621	89006622	chr6:89006622:T:C	rs13195096	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	90001522	90001523	chr6:90001523:G:A	rs79399228	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	90288602	90288603	chr6:90288603:A:G	rs644940	A	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	90413774	90413775	chr6:90413775:C:A	rs7745771	C	A	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr6	90413801	90413802	chr6:90413802:G:T	rs144716657	G	T	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	90480688	90480689	chr6:90480689:G:C	rs78393390	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	90634771	90634772	chr6:90634772:T:G	rs1556091	T	G	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr6	91704462	91704463	chr6:91704463:C:A	rs506122	C	A	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	91829494	91829495	chr6:91829495:G:A	rs1353700	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	93391818	93391819	chr6:93391819:G:C	rs574650	G	C	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	93412717	93412718	chr6:93412718:G:A	rs479191	G	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	93826060	93826061	chr6:93826061:C:T	rs951472	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	95227587	95227588	chr6:95227588:T:G	rs996105800	T	G	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	95326058	95326059	chr6:95326059:T:C	rs36158217	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	96014835	96014836	chr6:96014836:C:G	rs6913319	C	G	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	96147707	96147708	chr6:96147708:G:A	rs4278030	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr6	96152971	96152972	chr6:96152972:C:T	rs12191957	C	T	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	96152999	96153000	chr6:96153000:A:G	rs12194563	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	96721393	96721394	chr6:96721394:C:G	rs12528627	C	G	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	97040781	97040782	chr6:97040782:C:T	rs1737642	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	97048758	97048759	chr6:97048759:G:A	rs72930919	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	97627099	97627100	chr6:97627100:T:G	chr6:97627100:T:G	T	G	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	97989898	97989899	chr6:97989899:T:C	rs4240559	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr6	98366721	98366722	chr6:98366722:T:C	rs2388357	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	99821183	99821184	chr6:99821184:G:C	rs3935232	G	C	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr6	100268109	100268110	chr6:100268110:T:C	rs570121509	T	C	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	100382343	100382344	chr6:100382344:C:A	rs114458070	C	A	C	Alx1.mouse_homeodomain_1	2	1	+	7.233317895140026	5.9945040193600345	CCCAATTACC
chr6	100834416	100834417	chr6:100834417:C:T	rs76494678	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	101452237	101452238	chr6:101452238:T:C	rs2518160	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	101799797	101799798	chr6:101799798:T:C	rs6922753	T	C	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	102029941	102029942	chr6:102029942:G:A	rs9498808	G	A	a	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	102670861	102670862	chr6:102670862:A:G	rs73511802	A	G	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	103082276	103082277	chr6:103082277:C:T	rs176435	C	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	104754993	104754994	chr6:104754994:A:G	rs11156419	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr6	105460430	105460431	chr6:105460431:C:T	rs9486106	C	T	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	105753732	105753733	chr6:105753733:G:A	rs4946689	G	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	105785929	105785930	chr6:105785930:T:C	rs750401345	T	C	T	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	106070190	106070191	chr6:106070191:C:A	rs79101873	C	A	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr6	106525437	106525438	chr6:106525438:T:C	rs710096	T	C	T	Alx1.mouse_homeodomain_1	1	1	+	8.305181923889696	8.723290559459702	CTTAATTAAC
chr6	106613454	106613455	chr6:106613455:C:T	rs59962977	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	106689328	106689329	chr6:106689329:T:A	rs9384630	T	A	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr6	106849981	106849982	chr6:106849982:C:A	rs272584	C	A	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	107153399	107153400	chr6:107153400:T:C	rs9384650	T	C	T	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	107659201	107659202	chr6:107659202:A:T	rs10554	A	T	A	Alx1.mouse_homeodomain_1	8	1	-	8.312052953791037	9.292909885781963	TCTAATTATC
chr6	107680279	107680280	chr6:107680280:G:A	rs847003	G	A	g	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	107805620	107805621	chr6:107805621:A:C	rs10735716	A	C	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	108116785	108116786	chr6:108116786:G:T	rs116925534	G	T	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	108808341	108808342	chr6:108808342:T:G	rs8180534	T	G	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	110618957	110618958	chr6:110618958:C:T	rs79581912	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	110620082	110620083	chr6:110620083:A:C	rs9487464	A	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr6	110852969	110852970	chr6:110852970:G:A	rs812439	G	A	g	Alx1.mouse_homeodomain_1	9	1	-	8.17105328609015	7.43443768363584	CTTAATTAGC
chr6	111302270	111302271	chr6:111302271:A:T	rs142043997	A	T	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	111576063	111576064	chr6:111576064:C:G	rs79858430	C	G	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	111663805	111663806	chr6:111663806:T:A	rs9374270	T	A	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	111748135	111748136	chr6:111748136:G:A	rs117050043	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	111892583	111892584	chr6:111892584:A:G	rs6924139	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	111985611	111985612	chr6:111985612:T:C	rs74581555	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	112205786	112205787	chr6:112205787:T:C	rs73542518	T	C	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	112770925	112770926	chr6:112770926:A:G	rs4947202	A	G	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	112912752	112912753	chr6:112912753:G:A	rs375224778	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	113048121	113048122	chr6:113048122:A:C	rs78254924	A	C	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	113458396	113458397	chr6:113458397:G:A	rs139091772	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	113865695	113865696	chr6:113865696:C:A	rs74717803	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	7.802937221462287	6.209625295294503	TCCAATTACC
chr6	114134656	114134657	chr6:114134657:G:T	rs11153466	G	T	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	115078826	115078827	chr6:115078827:T:C	rs1367889	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr6	115078844	115078845	chr6:115078845:T:C	rs1367890	T	C	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	115511926	115511927	chr6:115511927:A:G	rs6568899	A	G	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	115995928	115995929	chr6:115995929:A:C	rs3798233	A	C	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	116047649	116047650	chr6:116047650:G:A	rs12524249	G	A	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	116429118	116429119	chr6:116429119:A:G	rs4946165	A	G	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr6	118300893	118300894	chr6:118300894:T:C	rs7747363	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	118681417	118681418	chr6:118681418:A:T	rs17349301	A	T	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr6	118821100	118821101	chr6:118821101:T:C	rs12190099	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr6	118841567	118841568	chr6:118841568:G:A	rs143154617	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	118935442	118935443	chr6:118935443:G:T	rs12200499	G	T	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	119039816	119039817	chr6:119039817:G:A	rs9387631	G	A	g	Alx1.mouse_homeodomain_1	9	1	-	8.438879858252715	7.702264255798406	TCCAATTAAC
chr6	119278281	119278282	chr6:119278282:A:T	rs6922115	A	T	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	119297571	119297572	chr6:119297572:A:G	rs17052758	A	G	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	120498752	120498753	chr6:120498753:G:A	rs76514106	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	7.920351646537226	TCTAATTACC
chr6	120588778	120588779	chr6:120588779:G:T	rs12204216	G	T	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	121674331	121674332	chr6:121674332:A:G	chr6:121674332:A:G	A	G	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	121754416	121754417	chr6:121754417:G:A	rs4245519	G	A	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	121967794	121967795	chr6:121967795:G:A	rs7747083	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	122011189	122011190	chr6:122011190:C:T	rs4615426	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	122027095	122027096	chr6:122027096:G:A	rs76250263	G	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	122370081	122370082	chr6:122370082:G:A	rs9401525	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	122408082	122408083	chr6:122408083:T:C	rs556675	T	C	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	123702529	123702530	chr6:123702530:C:T	rs17703235	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	124126024	124126025	chr6:124126025:A:G	rs163293	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	125094993	125094994	chr6:125094994:T:C	rs537804	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.874801250211958	6.267981360363268	TTTAATTAAC
chr6	125094997	125094998	chr6:125094998:T:C	rs10457459	T	C	T	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	125220704	125220705	chr6:125220705:A:G	rs1557052	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	125220715	125220716	chr6:125220716:G:A	rs3823222	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	125314198	125314199	chr6:125314199:G:A	rs74779619	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	125363104	125363105	chr6:125363105:A:G	rs17797377	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	8.874801250211958	8.305181923889696	TTTAATTAAC
chr6	127269254	127269255	chr6:127269255:C:T	rs2038378	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	127421113	127421114	chr6:127421114:A:T	rs73771687	A	T	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	127963625	127963626	chr6:127963626:G:A	rs802721	G	A	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	128054258	128054259	chr6:128054259:C:A	rs9375546	C	A	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	128258702	128258703	chr6:128258703:G:A	rs1738276	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr6	128522114	128522115	chr6:128522115:C:G	rs11963575	C	G	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	128656334	128656335	chr6:128656335:A:G	rs7771173	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr6	128676561	128676562	chr6:128676562:C:T	rs11961059	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	7.309859037861343	8.16388906539059	CCCAATTAGG
chr6	129639350	129639351	chr6:129639351:T:A	rs13203237	T	A	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	129779871	129779872	chr6:129779872:T:C	rs2876060	T	C	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	130070741	130070742	chr6:130070742:G:A	rs7759381	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr6	130184257	130184258	chr6:130184258:A:G	rs75482774	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.91565877229958	3.9439791192788376	TCTAATTACA
chr6	130227968	130227969	chr6:130227969:G:A	rs6569668	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.886642584883163	7.150026982428854	TTCAATTAGC
chr6	130394526	130394527	chr6:130394527:T:A	rs562197036	T	A	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	130604834	130604835	chr6:130604835:C:T	rs1933756	C	T	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr6	131067342	131067343	chr6:131067343:T:C	rs6901548	T	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	131103984	131103985	chr6:131103985:T:C	rs117828911	T	C	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	131122702	131122703	chr6:131122703:A:C	rs516473	A	C	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	131510365	131510366	chr6:131510366:C:T	rs9493008	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	131988997	131988998	chr6:131988998:C:T	rs233914	C	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	132973655	132973656	chr6:132973656:C:T	rs885488	C	T	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr6	133599962	133599963	chr6:133599963:G:T	rs79753905	G	T	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	133701373	133701374	chr6:133701374:C:T	rs77993542	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	9.292909885781963	8.556294283327654	TCTAATTAAC
chr6	133761777	133761778	chr6:133761778:A:G	rs73561562	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	134014746	134014747	chr6:134014747:A:G	rs2306649	A	G	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr6	134465323	134465324	chr6:134465324:T:A	rs7743107	T	A	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	134978820	134978821	chr6:134978821:T:C	rs13214669	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.233317895140026	4.626498005291335	CCCAATTACC
chr6	135708170	135708171	chr6:135708171:A:C	chr6:135708171:A:C	A	C	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	135795338	135795339	chr6:135795339:T:C	rs6925090	T	C	t	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	135940904	135940905	chr6:135940905:C:T	rs883799	C	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	135991322	135991323	chr6:135991323:G:A	rs76394910	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr6	136720927	136720928	chr6:136720928:T:C	rs9399193	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr6	137868377	137868378	chr6:137868378:A:G	rs5029926	A	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	137868388	137868389	chr6:137868389:G:A	rs186585061	G	A	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	138105136	138105137	chr6:138105137:G:A	rs12190191	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	139033000	139033001	chr6:139033001:C:G	rs9495317	C	G	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr6	139395803	139395804	chr6:139395804:T:G	rs9373237	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.312052953791037	3.496920560907099	TCTAATTATC
chr6	139651383	139651384	chr6:139651384:C:T	rs17069161	C	T	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr6	139841969	139841970	chr6:139841970:G:T	rs77405952	G	T	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr6	141729446	141729447	chr6:141729447:C:A	rs13199090	C	A	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	143592397	143592398	chr6:143592398:C:T	rs9321929	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	143609630	143609631	chr6:143609631:T:C	rs10484804	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	144646427	144646428	chr6:144646428:T:G	rs9390184	T	G	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	144777502	144777503	chr6:144777503:G:T	rs143001589	G	T	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	145022559	145022560	chr6:145022560:C:T	rs75845244	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.69757138156076	8.279462745990756	TCCAATTAAA
chr6	145368122	145368123	chr6:145368123:T:C	rs6902581	T	C	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr6	145405078	145405079	chr6:145405079:A:T	rs2328658	A	T	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr6	145554735	145554736	chr6:145554736:C:T	rs61358848	C	T	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	145554761	145554762	chr6:145554762:T:C	rs61638226	T	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	146431323	146431324	chr6:146431324:C:A	rs726714	C	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr6	146651761	146651762	chr6:146651762:T:C	rs9377014	T	C	C	Alx1.mouse_homeodomain_1	9	1	-	8.91565877229958	8.23169439272197	TCTAATTACA
chr6	146840357	146840358	chr6:146840358:A:C	rs60026048	A	C	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	146975257	146975258	chr6:146975258:C:A	rs1112833	C	A	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	147077700	147077701	chr6:147077701:C:A	rs149609037	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.981982082767747	7.388670156599962	CCTAATTAAA
chr6	147850233	147850234	chr6:147850234:C:T	rs75881935	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr6	148239720	148239721	chr6:148239721:T:G	rs7767314	T	G	G	Alx1.mouse_homeodomain_1	6	1	+	8.874801250211958	4.05966885732802	TTTAATTAAC
chr6	148472265	148472266	chr6:148472266:A:C	rs771113331	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.312052953791037	4.181640259860574	TCTAATTATC
chr6	148472276	148472277	chr6:148472277:C:T	rs117231855	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr6	148472278	148472279	chr6:148472279:C:T	rs143000015	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	148628755	148628756	chr6:148628756:A:T	rs75012252	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	9.551601409090008	5.8241201353984	TCTAATTAAA
chr6	148648517	148648518	chr6:148648518:C:T	rs56278915	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr6	148792009	148792010	chr6:148792010:C:T	rs35751268	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	148898694	148898695	chr6:148898695:C:T	rs900474	C	T	T	Alx1.mouse_homeodomain_1	1	1	+	9.551601409090008	9.133492773520002	TCTAATTAAA
chr6	148973962	148973963	chr6:148973963:A:G	rs561863284	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	148989754	148989755	chr6:148989755:G:T	rs2500523	G	T	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	149304475	149304476	chr6:149304476:T:C	rs597144	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr6	150635191	150635192	chr6:150635192:C:T	rs7775858	C	T	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr6	150978533	150978534	chr6:150978534:G:A	rs920562724	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr6	151276505	151276506	chr6:151276506:G:C	rs56827614	G	C	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr6	151396190	151396191	chr6:151396191:G:C	chr6:151396191:G:C	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	8.305181923889696	7.879909067620131	CTTAATTAAC
chr6	151413759	151413760	chr6:151413760:C:T	rs9479035	C	T	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr6	151453331	151453332	chr6:151453332:G:T	rs6557141	G	T	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	151765549	151765550	chr6:151765550:C:T	rs17081662	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr6	151900395	151900396	chr6:151900396:C:A	rs12174347	C	A	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	152322229	152322230	chr6:152322230:T:C	rs9322367	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	152461492	152461493	chr6:152461493:C:T	rs506181	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr6	154204327	154204328	chr6:154204328:A:G	rs192722089	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	154303792	154303793	chr6:154303793:C:T	rs73571026	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	154303814	154303815	chr6:154303815:C:T	rs192965676	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr6	154304227	154304228	chr6:154304228:A:T	rs35856845	A	T	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	154380650	154380651	chr6:154380651:A:T	rs9371797	A	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	154689796	154689797	chr6:154689797:G:A	rs9478578	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.981982082767747	8.563873447197741	CCTAATTAAA
chr6	154734469	154734470	chr6:154734470:G:A	rs79801576	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr6	155274563	155274564	chr6:155274564:G:T	rs9397799	G	T	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	155645310	155645311	chr6:155645311:T:G	rs12204654	T	G	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	155894060	155894061	chr6:155894061:G:A	rs6917967	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr6	157184566	157184567	chr6:157184567:G:A	rs187144497	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr6	157536582	157536583	chr6:157536583:C:A	rs9457716	C	A	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr6	157613433	157613434	chr6:157613434:T:C	rs4709438	T	C	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	157659843	157659844	chr6:157659844:A:G	rs628389	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.993823417438953	3.022143764418211	CCCAATTAGA
chr6	157740833	157740834	chr6:157740834:G:A	rs659978	G	A	-	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	158026221	158026222	chr6:158026222:C:T	rs59603776	C	T	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr6	158026258	158026259	chr6:158026259:C:A	rs573002078	C	A	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	158033841	158033842	chr6:158033842:A:G	rs2295893	A	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	158168622	158168623	chr6:158168623:C:G	rs62437115	C	G	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr6	158763644	158763645	chr6:158763645:C:T	rs2291385	C	T	C	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	158763655	158763656	chr6:158763656:T:G	rs369037182	T	G	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	158804203	158804204	chr6:158804204:C:T	rs3123126	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	158829262	158829263	chr6:158829263:T:C	rs5025999	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr6	158926791	158926792	chr6:158926792:T:A	rs9347276	T	A	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr6	159003618	159003619	chr6:159003619:G:A	rs3127176	G	A	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr6	159039542	159039543	chr6:159039543:A:G	rs1328488104	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	159152281	159152282	chr6:159152282:C:T	rs73019870	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	159456729	159456730	chr6:159456730:T:C	rs77233418	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	159789738	159789739	chr6:159789739:T:G	chr6:159789739:T:G	T	G	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	159789740	159789741	chr6:159789741:G:A	rs192473270	G	A	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	159789778	159789779	chr6:159789779:C:G	rs1482032106	C	G	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	160179104	160179105	chr6:160179105:T:G	rs791174	T	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	160272694	160272695	chr6:160272695:A:G	rs599507	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	160776054	160776055	chr6:160776055:A:G	rs1620921	A	G	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	160944403	160944404	chr6:160944404:A:T	rs1247348	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	7.886642584883163	2.4626607876668083	TTCAATTAGC
chr6	161493847	161493848	chr6:161493848:T:C	rs493806	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	7.886642584883163	7.317023258560902	TTCAATTAGC
chr6	161827136	161827137	chr6:161827137:C:T	rs2022991	C	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr6	162090990	162090991	chr6:162090991:C:T	rs7766005	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.17105328609015	7.43443768363584	CTTAATTAGC
chr6	162120673	162120674	chr6:162120674:G:T	rs876145	G	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	162465145	162465146	chr6:162465146:A:G	rs73606380	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr6	162528779	162528780	chr6:162528780:A:G	rs2846499	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	162539183	162539184	chr6:162539184:C:G	rs881830	C	G	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	163226871	163226872	chr6:163226872:T:G	rs12192550	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	9.133492773520002	2.844513538817043	TTTAATTAAA
chr6	163375477	163375478	chr6:163375478:C:T	rs1737319	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr6	163378821	163378822	chr6:163378822:T:A	rs1764013	T	A	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	163381890	163381891	chr6:163381891:T:A	rs73013553	T	A	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr6	163386715	163386716	chr6:163386716:C:G	rs1737329	C	G	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	163986082	163986083	chr6:163986083:G:A	rs595582	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr6	164247785	164247786	chr6:164247786:C:T	rs55667465	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	164998859	164998860	chr6:164998860:G:T	rs35139346	G	T	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr6	165532152	165532153	chr6:165532153:T:C	rs536093	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	165586589	165586590	chr6:165586590:C:T	rs73022152	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr6	165884860	165884861	chr6:165884861:C:A	rs58667017	C	A	c	Alx1.mouse_homeodomain_1	8	1	-	8.304751220453168	7.458022926261789	TCCAATTAGC
chr6	166241613	166241614	chr6:166241614:G:A	rs9348103	G	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	166241619	166241620	chr6:166241620:T:C	rs9356449	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	166256721	166256722	chr6:166256722:G:A	rs6930706	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr6	166493684	166493685	chr6:166493685:T:C	rs2235276	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.802937221462287	2.8312575684415457	TCCAATTACC
chr6	166775093	166775094	chr6:166775094:C:T	rs17518936	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	166937474	166937475	chr6:166937475:A:G	rs2757045	A	G	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	167260794	167260795	chr6:167260795:T:C	rs34446684	T	C	-	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr6	167428388	167428389	chr6:167428389:A:G	rs112610402	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	167812313	167812314	chr6:167812314:G:T	rs589006	G	T	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr6	168017945	168017946	chr6:168017946:T:C	rs41266301	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr6	168153787	168153788	chr6:168153788:G:A	rs75439690	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	168364271	168364272	chr6:168364272:G:T	rs9355064	G	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	168935478	168935479	chr6:168935479:A:T	rs56215486	A	T	A	Alx1.mouse_homeodomain_1	3	1	+	8.061628744770331	4.334147471078723	TCCAATTACA
chr6	169280728	169280729	chr6:169280729:C:T	rs116218089	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr6	169373824	169373825	chr6:169373825:T:G	rs11970074	T	G	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	6.133995219024997	TTTAATTAAA
chr6	169373834	169373835	chr6:169373835:T:A	rs11970075	T	A	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr6	169589806	169589807	chr6:169589807:T:C	rs12196723	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr6	169659835	169659836	chr6:169659836:A:T	rs79938197	A	T	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr6	169801882	169801883	chr6:169801883:T:G	chr6:169801883:T:G	T	G	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	169801895	169801896	chr6:169801896:T:G	chr6:169801896:T:G	T	G	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr6	169838706	169838707	chr6:169838707:G:A	rs9478016	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	169838714	169838715	chr6:169838715:C:T	rs117539939	C	T	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	169893347	169893348	chr6:169893348:G:C	rs1017199736	G	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr6	170172723	170172724	chr6:170172724:G:A	rs76613534	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr6	170186966	170186967	chr6:170186967:C:A	rs6934026	C	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr6	170223116	170223117	chr6:170223117:C:T	rs77398767	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	119130	119131	chr7:119131:C:T	rs779738492	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	159254	159255	chr7:159255:A:G	rs74448076	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr7	162530	162531	chr7:162531:A:T	rs73671738	A	T	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	250089	250090	chr7:250090:T:A	rs145548418	T	A	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	351636	351637	chr7:351637:A:T	rs181648274	A	T	a	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	6.4154977513127465	TTTAATTAAA
chr7	473972	473973	chr7:473973:G:A	rs35997106	G	A	g	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	556418	556419	chr7:556419:G:A	rs78062666	G	A	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	786464	786465	chr7:786465:G:A	rs62432898	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	809433	809434	chr7:809434:A:G	rs13244853	A	G	N	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	1066375	1066376	chr7:1066376:G:T	rs1104888	G	T	t	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	1239468	1239469	chr7:1239469:G:A	rs62435144	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr7	1255908	1255909	chr7:1255909:C:T	rs73670554	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	1289467	1289468	chr7:1289468:T:A	rs113670422	T	A	T	Alx1.mouse_homeodomain_1	6	1	+	8.589161921660155	5.357384974330892	CCTAATTAGC
chr7	1843147	1843148	chr7:1843148:T:G	rs571320475	T	G	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr7	1843158	1843159	chr7:1843159:G:A	rs73046323	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.346039445977318	8.91565877229958	CCTAATTACA
chr7	1990076	1990077	chr7:1990077:G:A	rs7798678	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	2030509	2030510	chr7:2030510:G:A	rs55695483	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	2166411	2166412	chr7:2166412:G:A	rs115967644	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	2179687	2179688	chr7:2179688:G:C	rs1637760	G	C	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	2547978	2547979	chr7:2547979:A:G	rs4721776	A	G	G	Alx1.mouse_homeodomain_1	0	1	-	8.304751220453168	7.735131894130908	TCCAATTAGC
chr7	2617268	2617269	chr7:2617269:C:T	rs1188572279	C	T	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	2736992	2736993	chr7:2736993:T:C	rs798520	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.879478364183603	2.907798711162862	TCCAATTAGG
chr7	2823939	2823940	chr7:2823940:G:A	rs2107964	G	A	G	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	2895162	2895163	chr7:2895163:G:C	rs867976	G	C	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	3374105	3374106	chr7:3374106:C:T	rs12673513	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	3408948	3408949	chr7:3408949:A:G	rs11972454	A	G	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr7	3471482	3471483	chr7:3471483:G:A	rs10232431	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr7	3915110	3915111	chr7:3915111:C:T	rs114815357	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	3943769	3943770	chr7:3943770:C:T	rs12536527	C	T	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr7	4307591	4307592	chr7:4307592:G:A	rs111983888	G	A	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	4434403	4434404	chr7:4434404:T:C	rs116679867	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.993823417438953	3.022143764418211	CCCAATTAGA
chr7	4561045	4561046	chr7:4561046:A:G	rs1996934	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	4746536	4746537	chr7:4746537:A:C	rs541328600	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	7.8208649373008745	3.6904522433704114	GCTAATTAGC
chr7	4845783	4845784	chr7:4845784:C:T	rs78016015	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	8.298017703190137	8.867637029512398	CCTAATTAAG
chr7	4858279	4858280	chr7:4858280:G:A	rs77600238	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr7	5231488	5231489	chr7:5231489:C:T	rs139325045	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	5423084	5423085	chr7:5423085:C:T	rs569036671	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	5534314	5534315	chr7:5534315:A:G	rs852389	A	G	a	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	5758996	5758997	chr7:5758997:G:A	rs370661308	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr7	5872088	5872089	chr7:5872089:T:G	rs566023467	T	G	.	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr7	5872100	5872101	chr7:5872101:G:A	rs118071245	G	A	.	Alx1.mouse_homeodomain_1	9	1	-	8.087347922669274	7.350732320214965	CCTAATTACC
chr7	6116368	6116369	chr7:6116369:G:T	rs73675827	G	T	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	6116371	6116372	chr7:6116372:A:G	rs117950169	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	6269588	6269589	chr7:6269589:T:G	rs76318475	T	G	T	Alx1.mouse_homeodomain_1	5	1	+	8.304751220453168	2.0157719857502094	TCCAATTAGC
chr7	6476805	6476806	chr7:6476806:T:G	rs17198191	T	G	T	Alx1.mouse_homeodomain_1	0	1	+	8.061628744770331	6.723712434088789	TCCAATTACA
chr7	6477152	6477153	chr7:6477153:T:C	rs1403782	T	C	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr7	7151171	7151172	chr7:7151172:C:T	rs4724956	C	T	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr7	7351394	7351395	chr7:7351395:A:G	rs1297792	A	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr7	7581830	7581831	chr7:7581831:A:G	rs2348338	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr7	7808153	7808154	chr7:7808154:A:G	rs6463726	A	G	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	7808160	7808161	chr7:7808161:C:A	rs6463727	C	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	7890068	7890069	chr7:7890069:G:C	rs10232828	G	C	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	8295800	8295801	chr7:8295801:A:G	rs117802970	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	9173310	9173311	chr7:9173311:G:T	rs1581686	G	T	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	9183964	9183965	chr7:9183965:A:G	rs7796895	A	G	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	9507734	9507735	chr7:9507735:C:A	rs58480132	C	A	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	9574930	9574931	chr7:9574931:C:T	rs2938841	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	10015803	10015804	chr7:10015804:A:G	rs547673102	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	3.156272402217758	CCCAATTAAA
chr7	11254413	11254414	chr7:11254414:A:G	rs10486113	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.01360700198315	3.041927348962409	TCCAATTAAG
chr7	11751157	11751158	chr7:11751158:T:G	rs17165166	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	7.233317895140026	2.418185502256089	CCCAATTACC
chr7	11910320	11910321	chr7:11910321:A:G	rs4422679	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	12105668	12105669	chr7:12105669:G:A	rs2110713	G	A	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	12710302	12710303	chr7:12710303:A:G	rs79382371	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr7	12779448	12779449	chr7:12779449:T:G	rs10807754	T	G	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	12861746	12861747	chr7:12861747:T:A	rs61475427	T	A	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	12861772	12861773	chr7:12861773:A:G	rs10240689	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	12866171	12866172	chr7:12866172:G:A	rs2357049	G	A	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	12899084	12899085	chr7:12899085:T:C	rs7785032	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.940983387749356	5.334163497900666	ACTAATTAGC
chr7	12919634	12919635	chr7:12919635:T:C	rs35942853	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	12952075	12952076	chr7:12952076:A:C	rs62446161	A	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	12952083	12952084	chr7:12952084:A:G	rs201310718	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.061628744770331	3.0899490917495904	TCCAATTACA
chr7	12952094	12952095	chr7:12952095:C:T	rs80122936	C	T	C	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr7	13927275	13927276	chr7:13927276:C:T	rs11505385	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	13939019	13939020	chr7:13939020:C:T	rs3801098	C	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	14210377	14210378	chr7:14210378:C:T	rs184404029	C	T	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	14219620	14219621	chr7:14219621:G:T	rs4584047	G	T	T	Alx1.mouse_homeodomain_1	8	1	-	7.49200941844807	8.1279520552385	CCCAATTACA
chr7	14605976	14605977	chr7:14605977:A:G	rs62445594	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.846603954486855	2.8749243014661134	TGTAATTAGC
chr7	14760113	14760114	chr7:14760114:T:C	rs979501	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	15054280	15054281	chr7:15054281:C:G	rs73066743	C	G	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	15581592	15581593	chr7:15581593:A:G	rs11772652	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	15683210	15683211	chr7:15683211:G:A	rs3801430	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	7.920351646537226	TCTAATTACC
chr7	15851274	15851275	chr7:15851275:C:T	rs2190942	C	T	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr7	16679447	16679448	chr7:16679448:T:C	rs10238254	T	C	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	16776160	16776161	chr7:16776161:C:G	rs2290836	C	G	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	17011018	17011019	chr7:17011019:A:C	rs706082	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	17015747	17015748	chr7:17015748:G:T	rs35175691	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	17320279	17320280	chr7:17320280:A:G	rs188698575	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.91565877229958	8.23169439272197	TCTAATTACA
chr7	17523910	17523911	chr7:17523911:C:T	rs1375233	C	T	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr7	17523917	17523918	chr7:17523918:C:T	rs11766613	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	7.886642584883163	8.020771222682711	TTCAATTAGC
chr7	17584072	17584073	chr7:17584073:G:T	rs11761930	G	T	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr7	17597441	17597442	chr7:17597442:G:T	rs6949722	G	T	t	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	17972128	17972129	chr7:17972129:A:T	rs12699927	A	T	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	18076454	18076455	chr7:18076455:T:C	rs4388360	T	C	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	18590584	18590585	chr7:18590585:A:C	rs1726610	A	C	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	18632857	18632858	chr7:18632858:T:A	rs801541	T	A	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	18680511	18680512	chr7:18680512:C:T	rs10257046	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	19328670	19328671	chr7:19328671:T:C	rs13232886	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.879478364183603	2.907798711162862	TCCAATTAGG
chr7	19777035	19777036	chr7:19777036:G:A	rs12536561	G	A	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	20064788	20064789	chr7:20064789:C:T	rs4721870	C	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	20420721	20420722	chr7:20420722:C:G	rs6964626	C	G	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	20794790	20794791	chr7:20794791:C:T	rs73087577	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	21269668	21269669	chr7:21269669:A:G	rs6461547	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	21605367	21605368	chr7:21605368:G:A	rs11976814	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.869260531930455	8.723290559459702	CCCAATTAAC
chr7	21656470	21656471	chr7:21656471:T:G	rs10499536	T	G	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	22082532	22082533	chr7:22082533:A:G	rs10271131	A	G	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	22250540	22250541	chr7:22250541:T:C	rs11980801	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	22295450	22295451	chr7:22295451:C:T	rs17146586	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	22584812	22584813	chr7:22584813:G:T	rs2961271	G	T	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	22843898	22843899	chr7:22843899:G:A	rs6973118	G	A	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr7	23055457	23055458	chr7:23055458:T:C	rs764009	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	23231411	23231412	chr7:23231412:A:C	rs1728313	A	C	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr7	23246726	23246727	chr7:23246727:C:T	rs765084584	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	23297995	23297996	chr7:23297996:G:T	rs199656	G	T	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	23350847	23350848	chr7:23350848:G:C	rs274054	G	C	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	23680463	23680464	chr7:23680464:C:T	rs183987805	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	24575653	24575654	chr7:24575654:A:G	rs80279245	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	24773606	24773607	chr7:24773607:T:A	rs1978122	T	A	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	24972422	24972423	chr7:24972423:A:G	rs2522237	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	3.156272402217758	CCCAATTAAA
chr7	25012670	25012671	chr7:25012671:G:A	rs67577159	G	A	A	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	25171484	25171485	chr7:25171485:T:C	rs13235643	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	8.16388906539059	7.309859037861343	CCTAATTAGG
chr7	25236804	25236805	chr7:25236805:T:C	rs757202	T	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr7	25256242	25256243	chr7:25256243:T:C	rs12538631	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	25304611	25304612	chr7:25304612:A:G	rs36044676	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	25455055	25455056	chr7:25455056:T:C	rs143972482	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr7	25455119	25455120	chr7:25455120:T:C	rs289990	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr7	25672652	25672653	chr7:25672653:C:T	rs10951084	C	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	26183810	26183811	chr7:26183811:C:T	rs73281527	C	T	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	26188156	26188157	chr7:26188157:A:C	rs10265394	A	C	c	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	26580834	26580835	chr7:26580835:T:C	rs17357990	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	26726367	26726368	chr7:26726368:T:G	rs11976472	T	G	T	Alx1.mouse_homeodomain_1	2	1	+	8.305181923889696	5.305684369394691	CTTAATTAAC
chr7	26730082	26730083	chr7:26730083:A:G	rs58988613	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	27139170	27139171	chr7:27139171:T:C	rs17471520	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	7.886642584883163	7.317023258560902	TTCAATTAGC
chr7	27139185	27139186	chr7:27139186:G:A	rs17500828	G	A	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr7	27162669	27162670	chr7:27162670:A:G	rs10259620	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.69757138156076	6.09075149171207	TCCAATTAAA
chr7	27289864	27289865	chr7:27289865:T:C	rs11564032	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	9.158781247982416	6.26168673864604	TCTAATTAGC
chr7	27459117	27459118	chr7:27459118:T:C	rs118038369	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	27842851	27842852	chr7:27842852:T:C	rs10486562	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	27910645	27910646	chr7:27910646:T:C	rs73685856	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr7	28356802	28356803	chr7:28356803:T:C	rs148515987	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.298017703190137	5.691197813341447	CCTAATTAAG
chr7	28971447	28971448	chr7:28971448:C:T	rs4719963	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	28971485	28971486	chr7:28971486:T:G	rs221181	T	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	29127871	29127872	chr7:29127872:T:A	rs245858	T	A	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	29148858	29148859	chr7:29148859:T:G	rs245884	T	G	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	29288658	29288659	chr7:29288659:A:G	rs2051839	A	G	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	29428293	29428294	chr7:29428294:T:C	rs6462138	T	C	t	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	29763330	29763331	chr7:29763331:C:A	rs2391797	C	A	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	30164648	30164649	chr7:30164649:A:G	rs116990984	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr7	30301805	30301806	chr7:30301806:A:G	rs77520275	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	30586109	30586110	chr7:30586110:C:T	rs4722992	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	30702507	30702508	chr7:30702508:C:A	rs255124	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	31115641	31115642	chr7:31115642:T:C	rs2192028	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	31133688	31133689	chr7:31133689:C:A	rs75282493	C	A	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr7	31770247	31770248	chr7:31770248:C:T	rs28844350	C	T	T	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	32014780	32014781	chr7:32014781:C:T	rs9639639	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	8.304751220453168	8.438879858252715	TCCAATTAGC
chr7	32715217	32715218	chr7:32715218:C:T	rs147821593	C	T	c	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	33039701	33039702	chr7:33039702:G:A	rs10085768	G	A	g	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	33472512	33472513	chr7:33472513:C:T	rs1419906	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	33472527	33472528	chr7:33472528:A:C	rs1419905	A	C	A	Alx1.mouse_homeodomain_1	9	1	+	9.417472771290461	9.158781247982416	TCTAATTAGA
chr7	33981534	33981535	chr7:33981535:A:T	rs1427478	A	T	A	Alx1.mouse_homeodomain_1	0	1	-	8.91565877229958	7.697860912066519	TCTAATTACA
chr7	34067325	34067326	chr7:34067326:G:C	rs940661725	G	C	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	34156325	34156326	chr7:34156326:A:T	rs57211072	A	T	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	34756073	34756074	chr7:34756074:C:G	rs35992792	C	G	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	36441237	36441238	chr7:36441238:C:T	rs3801306	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.852546319205846	8.422165645528107	CCTAATTAGT
chr7	36441266	36441267	chr7:36441267:C:T	rs3801305	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	36656769	36656770	chr7:36656770:C:T	rs12531648	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	36826020	36826021	chr7:36826021:G:A	rs116956192	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	37347045	37347046	chr7:37347046:G:C	rs1986567	G	C	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	37371773	37371774	chr7:37371774:T:G	rs56282157	T	G	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	37901549	37901550	chr7:37901550:T:C	rs1014938	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	37901594	37901595	chr7:37901595:G:A	rs1530821	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	38593050	38593051	chr7:38593051:T:C	rs12701637	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr7	39353847	39353848	chr7:39353848:A:C	rs950554330	A	C	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	39374481	39374482	chr7:39374482:A:G	rs1019083	A	G	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	40464302	40464303	chr7:40464303:G:C	rs34413977	G	C	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	40828116	40828117	chr7:40828117:G:T	rs61733279	G	T	G	Alx1.mouse_homeodomain_1	9	1	-	7.802937221462287	8.061628744770331	TCCAATTACC
chr7	40919786	40919787	chr7:40919787:T:C	rs29885	T	C	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	41010743	41010744	chr7:41010744:C:T	rs148186817	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr7	41028950	41028951	chr7:41028951:T:C	rs142660653	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	42194480	42194481	chr7:42194481:C:A	rs1457408423	C	A	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr7	42234847	42234848	chr7:42234848:T:C	rs79212655	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr7	42339373	42339374	chr7:42339374:C:G	rs16880579	C	G	C	Alx1.mouse_homeodomain_1	1	1	+	7.49200941844807	6.179832124952508	CCCAATTACA
chr7	42678044	42678045	chr7:42678045:T:A	rs115277719	T	A	T	Alx1.mouse_homeodomain_1	6	1	+	8.312052953791037	5.080276006461773	TCTAATTATC
chr7	43339244	43339245	chr7:43339245:G:A	rs978056	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	43436301	43436302	chr7:43436302:A:G	rs9655442	A	G	a	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	43528759	43528760	chr7:43528760:T:C	rs116752045	T	C	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	43615574	43615575	chr7:43615575:C:T	rs118149113	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	43615611	43615612	chr7:43615612:C:T	rs10215478	C	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	43721283	43721284	chr7:43721284:T:C	rs849167	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	44164418	44164419	chr7:44164419:A:G	rs111986273	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.305181923889696	3.333502270868955	CTTAATTAAC
chr7	44597887	44597888	chr7:44597888:G:A	rs7808258	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	44824902	44824903	chr7:44824903:C:T	rs144419703	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	45211760	45211761	chr7:45211761:C:T	rs34345812	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	45211771	45211772	chr7:45211772:A:T	rs16880990	A	T	A	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	45562192	45562193	chr7:45562193:A:G	rs58732257	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	45577399	45577400	chr7:45577400:A:G	rs149228627	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	45921945	45921946	chr7:45921946:T:C	rs2132572	T	C	C	Alx1.mouse_homeodomain_1	0	1	+	8.01360700198315	7.44398767566089	TCCAATTAAG
chr7	46126475	46126476	chr7:46126476:G:A	rs35597792	G	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	46126487	46126488	chr7:46126488:A:G	rs146893958	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.422165645528107	3.434443729259125	TCTAATTAGT
chr7	46607442	46607443	chr7:46607443:T:G	rs6945556	T	G	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	46607454	46607455	chr7:46607455:C:T	rs117807273	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr7	46881242	46881243	chr7:46881243:T:A	rs6966227	T	A	A	Alx1.mouse_homeodomain_1	7	1	-	7.309859037861343	4.591864015654087	CCCAATTAGG
chr7	47089280	47089281	chr7:47089281:C:T	rs6957383	C	T	T	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	47313847	47313848	chr7:47313848:A:G	rs117117522	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	47795428	47795429	chr7:47795429:A:G	rs9719534	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	47813798	47813799	chr7:47813799:G:A	rs4595031	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	47813814	47813815	chr7:47813815:A:G	rs6944477	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.802937221462287	2.8312575684415457	TCCAATTACC
chr7	48193279	48193280	chr7:48193280:A:G	rs143298995	A	G	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	48259550	48259551	chr7:48259551:A:G	rs60913257	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr7	48563704	48563705	chr7:48563705:T:C	rs59243715	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr7	49106420	49106421	chr7:49106421:G:A	rs10281127	G	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	49124896	49124897	chr7:49124897:A:G	rs11982395	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	49176468	49176469	chr7:49176469:C:A	rs529146014	C	A	C	Alx1.mouse_homeodomain_1	0	1	+	8.589161921660155	7.940983387749356	CCTAATTAGC
chr7	49176478	49176479	chr7:49176479:C:T	rs4571689	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	49527562	49527563	chr7:49527563:T:G	rs56013638	T	G	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	49631428	49631429	chr7:49631429:T:C	rs10276645	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr7	49643577	49643578	chr7:49643578:T:C	rs58694095	T	C	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr7	49983743	49983744	chr7:49983744:T:C	rs76627053	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	50061750	50061751	chr7:50061751:G:A	rs1911748	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	50121656	50121657	chr7:50121657:T:C	rs2366033	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	50309148	50309149	chr7:50309149:A:G	rs7782210	A	G	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	50309189	50309190	chr7:50309190:C:G	rs12718262	C	G	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	50478562	50478563	chr7:50478563:C:T	rs4580999	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	50529928	50529929	chr7:50529929:A:G	rs1982406	A	G	A	Alx1.mouse_homeodomain_1	1	1	-	8.23885861342153	8.656967248991535	TTTAATTACC
chr7	50703465	50703466	chr7:50703466:G:A	rs2715102	G	A	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr7	51081010	51081011	chr7:51081011:G:A	rs75759786	G	A	G	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	51620560	51620561	chr7:51620561:T:C	rs73125490	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	51761234	51761235	chr7:51761235:C:G	rs149814854	C	G	C	Alx1.mouse_homeodomain_1	9	1	+	7.735131894130908	7.309859037861343	CCCAATTAGC
chr7	51931418	51931419	chr7:51931419:T:C	rs383379	T	C	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	51957079	51957080	chr7:51957080:G:A	rs1031910	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr7	55063976	55063977	chr7:55063977:A:T	rs12669701	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	9.551601409090008	6.833606386882752	TCTAATTAAA
chr7	55064135	55064136	chr7:55064136:A:G	rs13244618	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	55192664	55192665	chr7:55192665:G:C	rs17337353	G	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr7	55208586	55208587	chr7:55208587:G:A	rs884419	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	55224845	55224846	chr7:55224846:C:G	rs6972050	C	G	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	55259579	55259580	chr7:55259580:T:C	rs7790808	T	C	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	55526970	55526971	chr7:55526971:C:T	rs76347287	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	56112916	56112917	chr7:56112917:C:G	rs73128323	C	G	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	57354869	57354870	chr7:57354870:T:C	rs4870647	T	C	N	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	57505225	57505226	chr7:57505226:G:A	rs10081282	G	A	.	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	64239433	64239434	chr7:64239434:G:A	rs10085751	G	A	-	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	64315485	64315486	chr7:64315486:C:T	rs73133695	C	T	C	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	64471173	64471174	chr7:64471174:C:A	rs80216832	C	A	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr7	64653211	64653212	chr7:64653212:C:T	rs1104867	C	T	N	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr7	64689631	64689632	chr7:64689632:C:T	rs2862798	C	T	c	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	64873059	64873060	chr7:64873060:C:T	rs10429185	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	65269158	65269159	chr7:65269159:T:C	chr7:65269159:T:C	T	C	T	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	65322409	65322410	chr7:65322410:T:A	rs538176599	T	A	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	66139634	66139635	chr7:66139635:C:T	rs316331	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr7	66152685	66152686	chr7:66152686:G:A	rs2292937	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	66415617	66415618	chr7:66415618:T:C	rs7803424	T	C	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	66554202	66554203	chr7:66554203:G:A	rs13536	G	A	N	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	66996212	66996213	chr7:66996213:A:G	rs375681391	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	66996224	66996225	chr7:66996225:A:C	rs184641529	A	C	a	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	66996225	66996226	chr7:66996226:A:T	rs4718437	A	T	N	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	66996226	66996227	chr7:66996227:T:A	rs189506212	T	A	t	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	67349253	67349254	chr7:67349254:A:T	rs73148499	A	T	N	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	67512543	67512544	chr7:67512544:A:G	rs77342661	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr7	67522905	67522906	chr7:67522906:A:G	rs4479994	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr7	67709596	67709597	chr7:67709597:T:C	rs2530447	T	C	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	67724002	67724003	chr7:67724003:G:C	rs12669579	G	C	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	67724038	67724039	chr7:67724039:G:T	rs7806722	G	T	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	68247339	68247340	chr7:68247340:T:C	rs77878213	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr7	68622865	68622866	chr7:68622866:T:C	rs79362511	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	69359500	69359501	chr7:69359501:G:C	rs13311894	G	C	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	69439027	69439028	chr7:69439028:T:A	rs996255768	T	A	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	69545100	69545101	chr7:69545101:A:G	rs10256311	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr7	69657071	69657072	chr7:69657072:T:C	rs548842691	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	9.133492773520002	8.563873447197741	TTTAATTAAA
chr7	69719987	69719988	chr7:69719988:G:A	rs74455112	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	70661159	70661160	chr7:70661160:A:G	rs4718978	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr7	70722587	70722588	chr7:70722588:A:G	rs55782022	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	70859527	70859528	chr7:70859528:C:T	rs1918420	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	71408271	71408272	chr7:71408272:T:C	rs17465622	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.01360700198315	3.041927348962409	TCCAATTAAG
chr7	71453543	71453544	chr7:71453544:T:C	rs79621326	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	71683635	71683636	chr7:71683636:C:T	rs150336228	C	T	c	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	71683640	71683641	chr7:71683641:T:C	rs137978306	T	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	72111124	72111125	chr7:72111125:T:A	rs12666578	T	A	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	72265589	72265590	chr7:72265590:A:G	rs7782517	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	72828848	72828849	chr7:72828849:T:A	rs184081098	T	A	t	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	73816477	73816478	chr7:73816478:T:C	rs11766186	T	C	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	74478894	74478895	chr7:74478895:G:T	rs1468418	G	T	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr7	75010695	75010696	chr7:75010696:C:T	rs3864390	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	75679121	75679122	chr7:75679122:A:T	chr7:75679122:A:T	A	T	a	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	3.053183508500595	CCCAATTAAA
chr7	75776397	75776398	chr7:75776398:G:C	rs78154784	G	C	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr7	76892021	76892022	chr7:76892022:C:T	rs184653242	C	T	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr7	76982033	76982034	chr7:76982034:A:G	rs2539638	A	G	.	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr7	77332416	77332417	chr7:77332417:T:A	rs11761838	T	A	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	77721147	77721148	chr7:77721148:G:T	rs55869229	G	T	g	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr7	77986851	77986852	chr7:77986852:T:C	rs13235414	T	C	T	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr7	77986890	77986891	chr7:77986891:A:G	rs13232467	A	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	78207405	78207406	chr7:78207406:G:T	rs10256412	G	T	T	Alx1.mouse_homeodomain_1	2	1	-	8.438879858252715	7.200065982472725	TCCAATTAAC
chr7	78303764	78303765	chr7:78303765:T:G	rs62463912	T	G	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	78489424	78489425	chr7:78489425:A:G	rs759335	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	80162074	80162075	chr7:80162075:G:A	rs77864381	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.233317895140026	6.81520925957002	CCCAATTACC
chr7	80275491	80275492	chr7:80275492:C:T	rs306694	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.312052953791037	7.575437351336728	TCTAATTATC
chr7	80637419	80637420	chr7:80637420:T:C	rs9918586	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	80832411	80832412	chr7:80832412:C:A	rs10251375	C	A	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	81155376	81155377	chr7:81155377:G:A	rs327729	G	A	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	81529958	81529959	chr7:81529959:C:T	rs150867893	C	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	81847200	81847201	chr7:81847201:A:T	rs56118176	A	T	A	Alx1.mouse_homeodomain_1	0	1	-	9.551601409090008	8.333803548856949	TCTAATTAAA
chr7	82184018	82184019	chr7:82184019:A:T	rs538497043	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	82319782	82319783	chr7:82319783:T:G	rs139132370	T	G	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	82319806	82319807	chr7:82319807:T:A	rs111855424	T	A	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	82322668	82322669	chr7:82322669:T:C	rs42047	T	C	T	Alx1.mouse_homeodomain_1	2	1	+	9.133492773520002	8.279462745990756	TTTAATTAAA
chr7	82692300	82692301	chr7:82692301:A:G	rs17156571	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	82985808	82985809	chr7:82985809:A:G	rs7778005	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	83150242	83150243	chr7:83150243:C:G	rs78684560	C	G	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	84021188	84021189	chr7:84021189:C:T	rs57531433	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	84548537	84548538	chr7:84548538:T:C	rs112710834	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	84598642	84598643	chr7:84598643:T:A	rs11979366	T	A	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	84638440	84638441	chr7:84638441:G:A	rs12672181	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	84823783	84823784	chr7:84823784:G:A	rs13235916	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	84946371	84946372	chr7:84946372:A:G	rs34462522	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	7.8208649373008745	5.214045047452184	GCTAATTAGC
chr7	85023671	85023672	chr7:85023672:A:C	rs1016027	A	C	C	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	85404910	85404911	chr7:85404911:G:T	rs1583081	G	T	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	85791615	85791616	chr7:85791616:T:C	rs149396246	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr7	86698150	86698151	chr7:86698151:A:G	rs117342224	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.061628744770331	3.0899490917495904	TCCAATTACA
chr7	86813177	86813178	chr7:86813178:G:T	rs10266758	G	T	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	87317220	87317221	chr7:87317221:A:C	rs144029120	A	C	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	87551361	87551362	chr7:87551362:A:T	rs4728702	A	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr7	87581657	87581658	chr7:87581658:C:A	rs1202172	C	A	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	87581749	87581750	chr7:87581750:T:C	rs73200315	T	C	t	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	87962282	87962283	chr7:87962283:G:C	rs138927920	G	C	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	88227095	88227096	chr7:88227096:A:G	rs773836205	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	8.304751220453168	5.6979313306044785	TCCAATTAGC
chr7	88523462	88523463	chr7:88523463:G:A	rs10487025	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.346039445977318	8.00112515077682	CCTAATTACA
chr7	88666899	88666900	chr7:88666900:T:A	rs12113484	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	89550172	89550173	chr7:89550173:T:C	rs2373874	T	C	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	90658456	90658457	chr7:90658457:C:A	rs1075012	C	A	C	Alx1.mouse_homeodomain_1	8	1	+	8.656967248991535	9.292909885781963	TCTAATTACC
chr7	90659993	90659994	chr7:90659994:C:T	rs4727234	C	T	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	90720533	90720534	chr7:90720534:T:A	rs17163109	T	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	90955988	90955989	chr7:90955989:G:C	rs2286697	G	C	G	Alx1.mouse_homeodomain_1	8	1	+	9.417472771290461	8.91565877229958	TCTAATTAGA
chr7	91005815	91005816	chr7:91005816:A:G	rs117804874	A	G	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr7	91137556	91137557	chr7:91137557:A:G	rs115089859	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	92025149	92025150	chr7:92025150:T:G	rs75237609	T	G	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr7	92447281	92447282	chr7:92447282:C:A	rs889440187	C	A	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	92447296	92447297	chr7:92447297:C:T	rs534130447	C	T	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	93014709	93014710	chr7:93014710:T:C	rs6973703	T	C	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	93187039	93187040	chr7:93187040:A:T	rs892396572	A	T	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	93921513	93921514	chr7:93921514:A:G	rs75457046	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	94052609	94052610	chr7:94052610:A:G	rs35616848	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	94060139	94060140	chr7:94060140:G:A	rs1159548	G	A	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	94079489	94079490	chr7:94079490:A:C	rs17165999	A	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	94355630	94355631	chr7:94355631:T:G	rs115740931	T	G	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	94393102	94393103	chr7:94393103:T:G	rs6962524	T	G	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	94422482	94422483	chr7:94422483:C:A	rs10235102	C	A	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	94434602	94434603	chr7:94434603:C:T	rs11979919	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	94450098	94450099	chr7:94450099:T:C	rs17268069	T	C	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	95003763	95003764	chr7:95003764:G:A	rs7795316	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr7	95200413	95200414	chr7:95200414:A:G	rs1534368	A	G	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	96246343	96246344	chr7:96246344:G:C	rs12704838	G	C	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr7	96832221	96832222	chr7:96832222:G:C	rs1947227	G	C	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	96991278	96991279	chr7:96991279:A:G	rs17168126	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	98495821	98495822	chr7:98495822:C:T	rs4729451	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr7	99275753	99275754	chr7:99275754:A:C	rs60205316	A	C	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	99510103	99510104	chr7:99510104:C:A	rs3901286	C	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	99990601	99990602	chr7:99990602:G:A	rs886453	G	A	.	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr7	100080962	100080963	chr7:100080963:G:A	rs188445679	G	A	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr7	100486090	100486091	chr7:100486091:A:G	rs567568603	A	G	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	101132948	101132949	chr7:101132949:A:T	rs2227676	A	T	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	101132972	101132973	chr7:101132973:G:T	rs2227677	G	T	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	101138627	101138628	chr7:101138628:C:T	rs2227714	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	7.49200941844807	7.147095123247572	CCCAATTACA
chr7	101456390	101456391	chr7:101456391:C:A	rs6973991	C	A	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	101456399	101456400	chr7:101456400:C:T	rs140208948	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	101567359	101567360	chr7:101567360:G:A	rs142888760	G	A	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	101618649	101618650	chr7:101618650:C:T	rs4727502	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	101637511	101637512	chr7:101637512:C:T	rs740203	C	T	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	101678662	101678663	chr7:101678663:G:A	rs933877822	G	A	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr7	101718076	101718077	chr7:101718077:T:C	rs371512486	T	C	T	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	101791027	101791028	chr7:101791028:T:G	rs2529219	T	G	g	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	101964799	101964800	chr7:101964800:A:G	rs441601	A	G	.	Alx1.mouse_homeodomain_1	5	1	-	8.01360700198315	3.0258850857141697	TCCAATTAAG
chr7	102098344	102098345	chr7:102098345:T:C	rs201461	T	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	102432156	102432157	chr7:102432157:A:G	rs13226125	A	G	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	103501413	103501414	chr7:103501414:C:T	rs79861185	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	103513323	103513324	chr7:103513324:C:T	rs3808033	C	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr7	103857525	103857526	chr7:103857526:A:C	rs2221785	A	C	t	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	103866591	103866592	chr7:103866592:T:C	rs3908281	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	103887758	103887759	chr7:103887759:T:C	rs13239321	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr7	103930318	103930319	chr7:103930319:C:T	rs6972635	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	103949453	103949454	chr7:103949454:A:G	rs35662900	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	104069664	104069665	chr7:104069665:A:G	rs6465961	A	G	a	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	105760324	105760325	chr7:105760325:T:C	rs758207334	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	105938519	105938520	chr7:105938520:G:T	rs193854	G	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	105938522	105938523	chr7:105938523:G:A	rs10267043	G	A	G	Alx1.mouse_homeodomain_1	0	1	+	7.9549935751004215	8.075112025548904	GCTAATTAAC
chr7	106420940	106420941	chr7:106420941:G:A	rs73723441	G	A	g	Alx1.mouse_homeodomain_1	1	1	-	7.735131894130908	7.317023258560902	CCCAATTAGC
chr7	106468688	106468689	chr7:106468689:G:T	rs718538	G	T	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	106570755	106570756	chr7:106570756:T:C	rs12705377	T	C	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	106737346	106737347	chr7:106737347:A:G	rs62481825	A	G	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	106737350	106737351	chr7:106737351:G:C	rs538920810	G	C	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	107258012	107258013	chr7:107258013:T:C	rs10487271	T	C	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	107463100	107463101	chr7:107463101:G:C	rs147352464	G	C	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	107890617	107890618	chr7:107890618:G:A	rs776521059	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	9.158781247982416	8.422165645528107	TCTAATTAGC
chr7	107946659	107946660	chr7:107946660:A:G	rs59659934	A	G	a	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	107966573	107966574	chr7:107966574:C:T	rs564206737	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr7	107994659	107994660	chr7:107994660:G:C	rs13247575	G	C	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	108099951	108099952	chr7:108099952:C:G	rs73725332	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	108419288	108419289	chr7:108419289:G:A	rs775487331	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	108526983	108526984	chr7:108526984:A:G	rs111664038	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr7	108863453	108863454	chr7:108863454:T:G	rs55944220	T	G	T	Alx1.mouse_homeodomain_1	2	1	+	7.8208649373008745	4.821367382805868	GCTAATTAGC
chr7	108985519	108985520	chr7:108985520:A:G	rs1849639	A	G	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr7	109244388	109244389	chr7:109244389:A:C	rs6951697	A	C	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr7	109503834	109503835	chr7:109503835:T:A	rs12111950	T	A	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	109637508	109637509	chr7:109637509:G:A	rs67462049	G	A	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	111107639	111107640	chr7:111107640:T:C	rs3823926	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	111140598	111140599	chr7:111140599:G:A	rs367646294	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	111291418	111291419	chr7:111291419:C:T	rs37757	C	T	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	111885131	111885132	chr7:111885132:C:T	rs2106739	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	112455566	112455567	chr7:112455567:C:G	rs3109112	C	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	112567027	112567028	chr7:112567028:A:T	rs78790686	A	T	A	Alx1.mouse_homeodomain_1	9	1	+	9.133492773520002	8.138185647757648	TTTAATTAAA
chr7	112994983	112994984	chr7:112994984:G:A	rs117482171	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	113067257	113067258	chr7:113067258:T:C	rs1852915	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.1279520552385	3.156272402217758	CCCAATTAAA
chr7	113715309	113715310	chr7:113715310:G:A	rs17619887	G	A	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	114131262	114131263	chr7:114131263:A:T	rs12666413	A	T	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	114202769	114202770	chr7:114202770:T:C	rs2222747	T	C	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	114519186	114519187	chr7:114519187:G:A	rs17372842	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	114645666	114645667	chr7:114645667:A:G	chr7:114645667:A:G	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	114657124	114657125	chr7:114657125:G:A	rs936145	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	115231302	115231303	chr7:115231303:T:G	rs116548735	T	G	T	Alx1.mouse_homeodomain_1	3	1	-	7.233317895140026	3.1029052012095635	CCCAATTACC
chr7	115300092	115300093	chr7:115300093:C:T	rs6968125	C	T	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	115300104	115300105	chr7:115300105:G:A	rs6968380	G	A	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	115475997	115475998	chr7:115475998:A:C	rs28642260	A	C	A	Alx1.mouse_homeodomain_1	8	1	+	8.981982082767747	8.346039445977318	CCTAATTAAA
chr7	116088414	116088415	chr7:116088415:G:A	rs4730709	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.312052953791037	7.575437351336728	TCTAATTATC
chr7	116148829	116148830	chr7:116148830:G:C	rs138430145	G	C	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr7	116168974	116168975	chr7:116168975:A:C	rs17138387	A	C	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	116277125	116277126	chr7:116277126:T:C	rs1819050	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	116320899	116320900	chr7:116320900:G:A	rs61557382	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	116446079	116446080	chr7:116446080:C:T	rs10215871	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	117005825	117005826	chr7:117005826:T:C	rs12669881	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr7	118635827	118635828	chr7:118635828:C:T	rs11771057	C	T	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	120780758	120780759	chr7:120780759:T:C	rs41614	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	120873741	120873742	chr7:120873742:G:A	rs74369618	G	A	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr7	120907957	120907958	chr7:120907958:T:C	rs74854997	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr7	120907962	120907963	chr7:120907963:C:T	rs74655738	C	T	T	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr7	121026493	121026494	chr7:121026494:T:G	rs144002107	T	G	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	121287737	121287738	chr7:121287738:G:A	rs2952556	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	121528994	121528995	chr7:121528995:A:G	rs7795140	A	G	a	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	121885429	121885430	chr7:121885430:C:T	rs2191783	C	T	c	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	121885440	121885441	chr7:121885441:A:G	rs740966	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	122302566	122302567	chr7:122302567:A:G	rs11978249	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	122557419	122557420	chr7:122557420:T:C	rs118090210	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.061628744770331	2.134724757610268	TCCAATTACA
chr7	122676577	122676578	chr7:122676578:C:A	rs7777183	C	A	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	123120638	123120639	chr7:123120639:C:A	rs75951857	C	A	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	123622767	123622768	chr7:123622768:G:T	chr7:123622768:G:T	G	T	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	123743460	123743461	chr7:123743461:G:C	rs28406929	G	C	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr7	124202003	124202004	chr7:124202004:A:G	rs79490203	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	124254964	124254965	chr7:124254965:G:A	rs12706574	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	124459246	124459247	chr7:124459247:C:T	rs17385987	C	T	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	124501517	124501518	chr7:124501518:C:A	rs11766249	C	A	C	Alx1.mouse_homeodomain_1	1	1	+	8.69757138156076	7.1042594553929765	TCCAATTAAA
chr7	125392145	125392146	chr7:125392146:C:T	rs7784402	C	T	C	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	125760605	125760606	chr7:125760606:T:G	rs144542216	T	G	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr7	126362990	126362991	chr7:126362991:C:T	rs335890	C	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	127366898	127366899	chr7:127366899:C:T	rs17864202	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	8.422165645528107	8.556294283327654	TCTAATTAGT
chr7	127958005	127958006	chr7:127958006:C:T	rs35774036	C	T	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	128085398	128085399	chr7:128085399:T:G	rs116566152	T	G	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	128100055	128100056	chr7:128100056:C:T	rs73239706	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr7	128190060	128190061	chr7:128190061:C:T	rs4728090	C	T	C	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	128288177	128288178	chr7:128288178:T:C	rs57060449	T	C	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	128507064	128507065	chr7:128507065:T:C	rs7806863	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	128528044	128528045	chr7:128528045:G:A	rs13226592	G	A	g	Alx1.mouse_homeodomain_1	9	1	-	8.74067261241241	8.004057009958101	TTTAATTAGC
chr7	128740524	128740525	chr7:128740525:C:T	rs62479563	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr7	129169072	129169073	chr7:129169073:T:A	rs142068870	T	A	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	129362765	129362766	chr7:129362766:A:G	rs75954998	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	129655951	129655952	chr7:129655952:A:G	rs2402965	A	G	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	129851370	129851371	chr7:129851371:C:G	rs151214659	C	G	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	130388247	130388248	chr7:130388248:C:T	rs17330508	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr7	130511852	130511853	chr7:130511853:T:G	rs10128	T	G	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr7	131011960	131011961	chr7:131011961:C:T	rs1588769	C	T	C	Alx1.mouse_homeodomain_1	9	1	+	8.589161921660155	7.852546319205846	CCTAATTAGC
chr7	131069303	131069304	chr7:131069304:G:C	rs148792817	G	C	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	131250649	131250650	chr7:131250650:A:T	rs7791813	A	T	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr7	131383402	131383403	chr7:131383403:A:G	rs3847105	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	7.869260531930455	2.8975808789097135	CCCAATTAAC
chr7	132117267	132117268	chr7:132117268:C:T	rs74540061	C	T	C	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr7	132177770	132177771	chr7:132177771:G:T	rs3734992	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	132215595	132215596	chr7:132215596:C:T	rs10156075	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	132474359	132474360	chr7:132474360:T:C	rs73442728	T	C	c	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	132474373	132474374	chr7:132474374:A:C	rs113247352	A	C	a	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	5.855046890259902	TTTAATTAAA
chr7	132474478	132474479	chr7:132474479:A:C	rs73724022	A	C	c	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	132474511	132474512	chr7:132474512:G:A	rs147130321	G	A	g	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr7	132878493	132878494	chr7:132878494:A:G	rs7799524	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.74067261241241	3.768992959391669	TTTAATTAGC
chr7	133045171	133045172	chr7:133045172:T:A	rs17337790	T	A	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	133620695	133620696	chr7:133620696:G:A	rs9641953	G	A	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	133957805	133957806	chr7:133957806:A:G	rs2971966	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr7	133957841	133957842	chr7:133957842:A:G	rs2971967	A	G	G	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	133957845	133957846	chr7:133957846:C:A	rs2971968	C	A	A	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	134317475	134317476	chr7:134317476:C:A	rs1646733	C	A	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	134509748	134509749	chr7:134509749:A:G	rs782520	A	G	G	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr7	134532865	134532866	chr7:134532866:C:T	rs77244289	C	T	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr7	134690091	134690092	chr7:134690092:T:C	rs75957732	T	C	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr7	134744658	134744659	chr7:134744659:T:C	rs12538586	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	134778396	134778397	chr7:134778397:A:C	rs3807334	A	C	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	134855105	134855106	chr7:134855106:G:A	rs741689	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	135261246	135261247	chr7:135261247:C:T	rs1646885	C	T	C	Alx1.mouse_homeodomain_1	8	1	-	7.886642584883163	8.020771222682711	TTCAATTAGC
chr7	135261247	135261248	chr7:135261248:T:G	rs1618426	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	7.886642584883163	4.608196701623063	TTCAATTAGC
chr7	135273340	135273341	chr7:135273341:T:C	rs75201531	T	C	T	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	135509643	135509644	chr7:135509644:G:A	rs140436150	G	A	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	135509647	135509648	chr7:135509648:C:G	rs531058837	C	G	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	135754979	135754980	chr7:135754980:T:A	rs56364051	T	A	T	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr7	135754981	135754982	chr7:135754982:G:T	rs55762215	G	T	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	135773797	135773798	chr7:135773798:G:T	rs7805728	G	T	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	135774466	135774467	chr7:135774467:G:A	rs36019693	G	A	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	135784713	135784714	chr7:135784714:G:A	rs6977424	G	A	g	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr7	136357526	136357527	chr7:136357527:T:G	chr7:136357527:T:G	T	G	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr7	136651610	136651611	chr7:136651611:T:A	rs139556785	T	A	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	137074041	137074042	chr7:137074042:G:A	rs12673281	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	138459849	138459850	chr7:138459850:T:A	rs536739056	T	A	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	138807093	138807094	chr7:138807094:G:A	rs4732339	G	A	A	Alx1.mouse_homeodomain_1	9	1	-	8.874801250211958	8.138185647757648	TTTAATTAAC
chr7	138908262	138908263	chr7:138908263:C:T	rs149966052	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	138963775	138963776	chr7:138963776:A:G	rs7791570	A	G	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	138963790	138963791	chr7:138963791:G:A	rs512927	G	A	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr7	140552706	140552707	chr7:140552707:G:T	rs4725750	G	T	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr7	141765562	141765563	chr7:141765563:T:C	rs6962760	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	142845163	142845164	chr7:142845164:A:G	rs11761928	A	G	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr7	143008318	143008319	chr7:143008319:C:T	chr7:143008319:C:T	C	T	c	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr7	143008328	143008329	chr7:143008329:T:C	rs13438029	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr7	143515199	143515200	chr7:143515200:C:T	rs13243737	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr7	143515200	143515201	chr7:143515201:G:A	rs17164352	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr7	143515223	143515224	chr7:143515224:G:T	rs577878407	G	T	G	Alx1.mouse_homeodomain_1	0	1	-	8.1279520552385	7.479773521327702	CCCAATTAAA
chr7	144908927	144908928	chr7:144908928:T:C	rs940766	T	C	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	145082815	145082816	chr7:145082816:G:A	rs118114357	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr7	145699047	145699048	chr7:145699048:A:G	rs850545	A	G	G	Alx1.mouse_homeodomain_1	3	1	+	8.981982082767747	6.375162192919057	CCTAATTAAA
chr7	145784506	145784507	chr7:145784507:A:C	rs2372128	A	C	A	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	146073285	146073286	chr7:146073286:A:T	rs12703761	A	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	147335455	147335456	chr7:147335456:G:C	rs747140	G	C	C	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	147486416	147486417	chr7:147486417:C:A	rs2286125	C	A	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr7	147578209	147578210	chr7:147578210:G:A	rs7780313	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr7	147585234	147585235	chr7:147585235:G:T	rs727640	G	T	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr7	147861570	147861571	chr7:147861571:C:T	rs10488351	C	T	C	Alx1.mouse_homeodomain_1	2	1	+	8.563442743761213	9.417472771290461	TCCAATTAGA
chr7	147909645	147909646	chr7:147909646:C:T	rs78049054	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	147912284	147912285	chr7:147912285:A:T	rs11561915	A	T	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr7	147978596	147978597	chr7:147978597:G:C	rs2373286	G	C	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	148303725	148303726	chr7:148303726:G:A	rs1104852	G	A	-	Alx1.mouse_homeodomain_1	0	1	-	7.309859037861343	7.879478364183603	CCCAATTAGG
chr7	148773226	148773227	chr7:148773227:C:T	rs2373414	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	9.158781247982416	8.74067261241241	TCTAATTAGC
chr7	148915881	148915882	chr7:148915882:T:A	rs12532430	T	A	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	149130772	149130773	chr7:149130773:G:A	rs12704062	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr7	149263245	149263246	chr7:149263246:A:T	rs569158293	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	9.133492773520002	6.4154977513127465	TTTAATTAAA
chr7	149263264	149263265	chr7:149263265:C:T	rs71529700	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr7	149600012	149600013	chr7:149600013:A:G	rs354042	A	G	-	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	149854902	149854903	chr7:149854903:C:T	rs553932431	C	T	C	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	149854903	149854904	chr7:149854904:A:G	rs4141214	A	G	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	149877178	149877179	chr7:149877179:T:C	rs10241201	T	C	.	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr7	150326309	150326310	chr7:150326310:C:G	rs540643190	C	G	c	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr7	150357833	150357834	chr7:150357834:G:T	rs73170198	G	T	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr7	150799348	150799349	chr7:150799349:G:C	rs7781814	G	C	G	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr7	151085103	151085104	chr7:151085104:T:G	chr7:151085104:T:G	T	G	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	151423832	151423833	chr7:151423833:A:T	rs55683955	A	T	A	Alx1.mouse_homeodomain_1	9	1	+	9.551601409090008	8.556294283327654	TCTAATTAAA
chr7	151426820	151426821	chr7:151426821:C:G	rs73476424	C	G	G	Alx1.mouse_homeodomain_1	9	1	+	7.735131894130908	7.309859037861343	CCCAATTAGC
chr7	151426834	151426835	chr7:151426835:C:T	rs886311072	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr7	151507452	151507453	chr7:151507453:T:C	rs73154876	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr7	152474206	152474207	chr7:152474207:T:C	rs77461343	T	C	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	152577170	152577171	chr7:152577171:G:A	rs35356475	G	A	G	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr7	152663098	152663099	chr7:152663099:G:A	rs3218458	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr7	152863861	152863862	chr7:152863862:C:T	rs7787344	C	T	-	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	153989834	153989835	chr7:153989835:T:C	rs188326461	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.061628744770331	3.073906828501351	TCCAATTACA
chr7	154620197	154620198	chr7:154620198:T:C	rs4960608	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	155824850	155824851	chr7:155824851:G:A	rs11576047	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.662075066399709	7.243966430829703	CCTAATTACG
chr7	155830770	155830771	chr7:155830771:A:G	rs288755	A	G	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr7	155924873	155924874	chr7:155924874:G:A	rs58181134	G	A	g	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	155924898	155924899	chr7:155924899:G:T	rs10227233	G	T	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr7	156028130	156028131	chr7:156028131:C:T	rs4716580	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr7	156042197	156042198	chr7:156042198:C:T	rs28605541	C	T	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	156195488	156195489	chr7:156195489:G:T	rs67064945	G	T	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr7	157064868	157064869	chr7:157064869:T:C	rs149226112	T	C	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	157152240	157152241	chr7:157152241:G:A	rs74671488	G	A	G	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr7	157435337	157435338	chr7:157435338:A:C	rs13233906	A	C	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	157435377	157435378	chr7:157435378:A:G	rs12698059	A	G	N	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr7	157686608	157686609	chr7:157686609:A:C	rs1452292566	A	C	.	Alx1.mouse_homeodomain_1	5	1	-	8.422165645528107	2.1331864108251475	TCTAATTAGT
chr7	157770362	157770363	chr7:157770363:T:G	rs1796259	T	G	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	158761394	158761395	chr7:158761395:C:T	rs112709510	C	T	C	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	158816177	158816178	chr7:158816178:A:C	rs555280922	A	C	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	159115604	159115605	chr7:159115605:G:A	rs6973238	G	A	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr7	159115613	159115614	chr7:159115614:T:G	rs181582448	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.867637029512398	5.589191146252298	TCTAATTAAG
chr7	159191597	159191598	chr7:159191598:G:A	rs378441	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	159291364	159291365	chr7:159291365:A:G	rs142166080	A	G	.	Alx1.mouse_homeodomain_1	3	1	+	9.551601409090008	6.9447815192413165	TCTAATTAAA
chr8	482584	482585	chr8:482585:C:A	rs6994164	C	A	A	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	610642	610643	chr8:610643:T:C	rs11987244	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	763980	763981	chr8:763981:C:T	rs4074580	C	T	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr8	764647	764648	chr8:764648:A:G	rs7825497	A	G	G	Alx1.mouse_homeodomain_1	4	1	+	9.417472771290461	4.445793118269719	TCTAATTAGA
chr8	893431	893432	chr8:893432:A:T	rs17065443	A	T	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr8	1214909	1214910	chr8:1214910:T:G	rs11996586	T	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	1214916	1214917	chr8:1214917:C:G	rs34086587	C	G	C	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	1267431	1267432	chr8:1267432:G:T	rs146212999	G	T	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr8	1267458	1267459	chr8:1267459:G:T	rs13281633	G	T	G	Alx1.mouse_homeodomain_1	2	1	-	7.735131894130908	6.496318018350917	CCCAATTAGC
chr8	1364711	1364712	chr8:1364712:G:C	rs117509880	G	C	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	1371540	1371541	chr8:1371541:C:G	rs72621158	C	G	C	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	1701771	1701772	chr8:1701772:T:A	rs6992443	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	8.312052953791037	5.59405793158378	TCTAATTATC
chr8	1701793	1701794	chr8:1701794:G:A	rs7005715	G	A	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	1800319	1800320	chr8:1800320:A:C	rs113231692	A	C	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	1899397	1899398	chr8:1899398:A:C	rs6990473	A	C	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	1973161	1973162	chr8:1973162:C:T	rs117671892	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	1975033	1975034	chr8:1975034:A:G	rs73671072	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	2079643	2079644	chr8:2079644:A:G	rs4389966	A	G	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr8	2079674	2079675	chr8:2079675:A:G	rs190588475	A	G	A	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	2093638	2093639	chr8:2093639:G:A	rs4559266	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.17105328609015	8.74067261241241	CTTAATTAGC
chr8	2138505	2138506	chr8:2138506:A:C	rs3779817	A	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	2161864	2161865	chr8:2161865:G:A	rs62501423	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	2161879	2161880	chr8:2161880:T:C	rs62501424	T	C	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	2658219	2658220	chr8:2658220:G:A	rs4876025	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	2658221	2658222	chr8:2658222:G:A	rs73657484	G	A	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	2658261	2658262	chr8:2658262:T:C	rs141864288	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	2665885	2665886	chr8:2665886:A:C	rs11777237	A	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	2947403	2947404	chr8:2947404:C:T	rs2670063	C	T	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	2947404	2947405	chr8:2947405:G:A	rs151086314	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	2953002	2953003	chr8:2953003:G:C	rs668789	G	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	3303839	3303840	chr8:3303840:T:C	rs12545641	T	C	T	Alx1.mouse_homeodomain_1	1	1	+	9.133492773520002	9.551601409090008	TTTAATTAAA
chr8	3490017	3490018	chr8:3490018:G:T	rs13280462	G	T	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	3584455	3584456	chr8:3584456:T:C	rs4875743	T	C	t	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	3654075	3654076	chr8:3654076:C:T	rs58587540	C	T	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	4305190	4305191	chr8:4305191:C:T	rs11776123	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr8	4373712	4373713	chr8:4373713:G:C	rs12549600	G	C	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	4386740	4386741	chr8:4386741:T:C	rs11785795	T	C	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr8	5229661	5229662	chr8:5229662:G:A	rs77908156	G	A	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	5275670	5275671	chr8:5275671:T:C	rs117877944	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	5686286	5686287	chr8:5686287:T:C	rs11774578	T	C	t	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	6076634	6076635	chr8:6076635:A:C	rs10090439	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	8.438879858252715	4.308467164322253	TCCAATTAAC
chr8	6076649	6076650	chr8:6076650:A:T	rs10090445	A	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	6127759	6127760	chr8:6127760:C:G	rs10089232	C	G	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	6246866	6246867	chr8:6246867:G:C	rs6559124	G	C	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr8	6246893	6246894	chr8:6246894:C:T	rs6559125	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	6434418	6434419	chr8:6434419:A:C	rs187285562	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	6517200	6517201	chr8:6517201:A:G	rs2916724	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.061628744770331	3.0899490917495904	TCCAATTACA
chr8	6560874	6560875	chr8:6560875:G:T	rs2959769	G	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	6700369	6700370	chr8:6700370:C:T	rs11137061	C	T	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	6726130	6726131	chr8:6726131:A:G	rs2980685	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr8	6792123	6792124	chr8:6792124:T:C	rs9314610	T	C	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr8	8247882	8247883	chr8:8247883:T:C	rs17594065	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.69757138156076	3.7258917285400193	TCCAATTAAA
chr8	8268550	8268551	chr8:8268551:T:C	rs712258	T	C	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	8280137	8280138	chr8:8280138:T:C	rs190909032	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.305181923889696	3.3174600076207157	CTTAATTAAC
chr8	8333272	8333273	chr8:8333273:T:C	rs2980496	T	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	8593831	8593832	chr8:8593832:A:T	rs112272852	A	T	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	8658172	8658173	chr8:8658173:G:A	rs11787033	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr8	8904770	8904771	chr8:8904771:A:G	rs28407621	A	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	9518433	9518434	chr8:9518434:C:T	rs17733293	C	T	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	9568187	9568188	chr8:9568188:A:C	rs10088969	A	C	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	9758467	9758468	chr8:9758468:G:A	rs74301631	G	A	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	9826503	9826504	chr8:9826504:A:C	rs13279794	A	C	C	Alx1.mouse_homeodomain_1	0	1	-	8.061628744770331	6.723712434088789	TCCAATTACA
chr8	10247936	10247937	chr8:10247937:C:G	rs4841296	C	G	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr8	10247937	10247938	chr8:10247938:T:C	rs4240636	T	C	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr8	10258388	10258389	chr8:10258389:C:G	rs144541777	C	G	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	10535743	10535744	chr8:10535744:A:G	rs12549246	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	11173671	11173672	chr8:11173672:A:T	rs7000298	A	T	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	11237375	11237376	chr8:11237376:G:A	rs6601574	G	A	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr8	11762816	11762817	chr8:11762817:T:A	rs17810775	T	A	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr8	12831048	12831049	chr8:12831049:A:C	rs11203841	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	12887443	12887444	chr8:12887444:A:C	rs56385022	A	C	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	12896757	12896758	chr8:12896758:G:A	rs17121552	G	A	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	12916700	12916701	chr8:12916701:C:G	rs2977127	C	G	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr8	12939788	12939789	chr8:12939789:G:A	rs6531011	G	A	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	13091699	13091700	chr8:13091700:G:C	rs510271	G	C	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	13109024	13109025	chr8:13109025:T:C	rs508097	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	13117785	13117786	chr8:13117786:C:T	rs4831393	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	13358217	13358218	chr8:13358218:G:A	rs73203990	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	13378045	13378046	chr8:13378046:C:T	rs6530629	C	T	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	13387044	13387045	chr8:13387045:A:T	rs13268767	A	T	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	13706513	13706514	chr8:13706514:A:G	rs62493075	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.01360700198315	3.041927348962409	TCCAATTAAG
chr8	13792130	13792131	chr8:13792131:A:C	rs11774435	A	C	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr8	14034275	14034276	chr8:14034276:T:A	rs12542704	T	A	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	14277280	14277281	chr8:14277281:T:C	rs7825535	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr8	14412477	14412478	chr8:14412478:A:G	rs28539573	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.69757138156076	8.01360700198315	TCCAATTAAA
chr8	14596272	14596273	chr8:14596273:T:A	rs114576378	T	A	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	14781128	14781129	chr8:14781129:G:C	rs2197108	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.422165645528107	7.109988352032546	TCTAATTAGT
chr8	14997583	14997584	chr8:14997584:T:C	rs13278622	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	15994793	15994794	chr8:15994794:A:G	rs73200464	A	G	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr8	16015259	16015260	chr8:16015260:C:T	rs2898430	C	T	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	16768219	16768220	chr8:16768220:A:T	rs4922231	A	T	A	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr8	16912820	16912821	chr8:16912821:T:A	rs115009942	T	A	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	17310628	17310629	chr8:17310629:A:G	rs62498846	A	G	a	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr8	17618910	17618911	chr8:17618911:C:T	rs2517214	C	T	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	17766277	17766278	chr8:17766278:G:T	rs144685294	G	T	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	18073095	18073096	chr8:18073096:A:C	rs6586686	A	C	A	Alx1.mouse_homeodomain_1	2	1	-	8.422165645528107	5.422668091033102	TCTAATTAGT
chr8	18177863	18177864	chr8:18177864:G:T	rs28513186	G	T	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	18262434	18262435	chr8:18262435:T:A	rs74715370	T	A	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	18320626	18320627	chr8:18320627:G:A	rs117688508	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.656967248991535	7.920351646537226	TCTAATTACC
chr8	18647339	18647340	chr8:18647340:A:T	rs7822186	A	T	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	18647342	18647343	chr8:18647343:T:G	rs11775173	T	G	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr8	18863369	18863370	chr8:18863370:C:G	rs17127355	C	G	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	18912526	18912527	chr8:18912527:A:G	rs138074633	A	G	A	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr8	18988522	18988523	chr8:18988523:T:C	rs2898483	T	C	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	18999243	18999244	chr8:18999244:C:T	rs74474376	C	T	C	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	19003896	19003897	chr8:19003897:G:A	rs79514962	G	A	A	Alx1.mouse_homeodomain_1	1	1	-	7.852546319205846	7.43443768363584	CCTAATTAGT
chr8	19003906	19003907	chr8:19003907:G:A	rs79221754	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	19159817	19159818	chr8:19159818:T:C	rs691872	T	C	c	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	19228842	19228843	chr8:19228843:C:T	rs1118972	C	T	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	19524333	19524334	chr8:19524334:C:T	rs7002464	C	T	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	19682925	19682926	chr8:19682926:A:G	rs4921665	A	G	A	Alx1.mouse_homeodomain_1	7	1	+	7.233317895140026	1.3064139079799624	CCCAATTACC
chr8	19682942	19682943	chr8:19682943:G:A	rs73599295	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr8	19813466	19813467	chr8:19813467:A:G	rs117858873	A	G	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	20187124	20187125	chr8:20187125:T:A	rs7820517	T	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	20369267	20369268	chr8:20369268:C:T	rs117166165	C	T	c	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	20412108	20412109	chr8:20412109:C:G	rs35673104	C	G	C	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	20552181	20552182	chr8:20552182:T:G	rs78293317	T	G	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	20772446	20772447	chr8:20772447:G:A	rs17604209	G	A	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr8	21534452	21534453	chr8:21534453:C:T	rs1600687	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	21562773	21562774	chr8:21562774:C:T	rs78977335	C	T	T	Alx1.mouse_homeodomain_1	9	1	-	7.309859037861343	7.993823417438953	CCCAATTAGG
chr8	21822836	21822837	chr8:21822837:G:A	rs7014068	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	21884795	21884796	chr8:21884796:T:C	rs67083652	T	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	22198247	22198248	chr8:22198248:C:T	rs1008934316	C	T	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	22777821	22777822	chr8:22777822:G:A	rs12676845	G	A	G	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr8	22778971	22778972	chr8:22778972:G:A	chr8:22778972:G:A	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr8	22879611	22879612	chr8:22879612:T:A	rs11135683	T	A	T	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	23097151	23097152	chr8:23097152:C:T	chr8:23097152:C:T	C	T	C	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr8	23171469	23171470	chr8:23171470:C:T	rs138693175	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr8	23753242	23753243	chr8:23753243:C:T	rs310289	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	23753285	23753286	chr8:23753286:T:G	rs1561105	T	G	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr8	23930881	23930882	chr8:23930882:C:G	rs1731265	C	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	24934038	24934039	chr8:24934039:A:C	rs196839	A	C	C	Alx1.mouse_homeodomain_1	4	1	+	8.1279520552385	2.666185404517345	CCCAATTAAA
chr8	24958615	24958616	chr8:24958616:C:T	rs2976437	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.233317895140026	6.81520925957002	CCCAATTACC
chr8	24958640	24958641	chr8:24958641:A:G	rs2976436	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	25168411	25168412	chr8:25168412:A:G	rs78918031	A	G	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr8	25252411	25252412	chr8:25252412:G:T	rs114338457	G	T	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	25298737	25298738	chr8:25298738:A:T	rs61205519	A	T	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	25737748	25737749	chr8:25737749:T:C	rs1425726	T	C	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr8	26635012	26635013	chr8:26635013:C:T	rs76617667	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	26635043	26635044	chr8:26635044:C:A	rs1867042	C	A	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	26764900	26764901	chr8:26764901:T:C	rs59917388	T	C	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	27205115	27205116	chr8:27205116:T:C	rs768566882	T	C	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr8	27274418	27274419	chr8:27274419:A:C	rs140103307	A	C	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	27443973	27443974	chr8:27443974:A:G	rs1991570	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.304751220453168	3.3330715674324276	TCCAATTAGC
chr8	27827821	27827822	chr8:27827822:A:G	rs111966103	A	G	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	28434934	28434935	chr8:28434935:G:T	rs6558058	G	T	g	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	28445269	28445270	chr8:28445270:G:C	rs1060409	G	C	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	28445280	28445281	chr8:28445281:G:A	rs1978678	G	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	28479526	28479527	chr8:28479527:A:G	rs6993584	A	G	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	28821254	28821255	chr8:28821255:C:T	rs9692981	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	29317933	29317934	chr8:29317934:T:C	rs609398	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.233317895140026	2.2616382421192847	CCCAATTACC
chr8	29420072	29420073	chr8:29420073:C:T	rs2670688	C	T	T	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	29611344	29611345	chr8:29611345:C:T	rs79802815	C	T	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr8	29645392	29645393	chr8:29645393:A:G	rs4073220	A	G	G	Alx1.mouse_homeodomain_1	9	1	+	8.91565877229958	8.23169439272197	TCTAATTACA
chr8	29791449	29791450	chr8:29791450:A:G	rs13261149	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	30148631	30148632	chr8:30148632:C:G	rs6991252	C	G	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr8	30202181	30202182	chr8:30202182:G:T	rs16876663	G	T	G	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr8	30269937	30269938	chr8:30269938:T:G	rs2938207	T	G	T	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	30269942	30269943	chr8:30269943:C:G	rs2938206	C	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	30517478	30517479	chr8:30517479:G:T	rs768514188	G	T	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	30648289	30648290	chr8:30648290:G:A	rs4486158	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	31185406	31185407	chr8:31185407:G:C	rs3213204	G	C	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	31318596	31318597	chr8:31318597:A:G	rs76321759	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	32038349	32038350	chr8:32038350:A:G	rs10954819	A	G	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	32307316	32307317	chr8:32307317:C:A	rs543140681	C	A	C	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	32408563	32408564	chr8:32408564:C:G	rs67961887	C	G	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	32590497	32590498	chr8:32590498:C:A	rs2439291	C	A	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	32618347	32618348	chr8:32618348:A:G	rs72612113	A	G	A	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	33203893	33203894	chr8:33203894:A:G	rs10092532	A	G	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	33413268	33413269	chr8:33413269:C:T	rs55883200	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	33640590	33640591	chr8:33640591:T:C	rs62511954	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr8	33895051	33895052	chr8:33895052:G:A	rs66475930	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	34421969	34421970	chr8:34421970:A:C	rs2120917	A	C	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	34531308	34531309	chr8:34531309:T:A	rs12680034	T	A	A	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	34826044	34826045	chr8:34826045:G:A	rs148114773	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	35209600	35209601	chr8:35209601:G:A	rs6997817	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	35542270	35542271	chr8:35542271:G:A	rs554097300	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	35863640	35863641	chr8:35863641:G:A	rs9642758	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr8	37080798	37080799	chr8:37080799:C:G	rs1111387	C	G	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	38571853	38571854	chr8:38571854:C:A	rs17582026	C	A	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	39000637	39000638	chr8:39000638:T:C	rs72638553	T	C	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	39886976	39886977	chr8:39886977:C:T	rs1421216	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	8.087347922669274	7.742433627468776	CCTAATTACC
chr8	40084332	40084333	chr8:40084333:C:A	rs16888729	C	A	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	40102366	40102367	chr8:40102367:G:C	rs10958600	G	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	40447776	40447777	chr8:40447777:C:T	rs77931751	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	40484725	40484726	chr8:40484726:A:C	rs13258721	A	C	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	40694095	40694096	chr8:40694096:C:A	rs57496181	C	A	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr8	40725302	40725303	chr8:40725303:C:A	rs4535727	C	A	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	40888536	40888537	chr8:40888537:G:A	rs116957037	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	41474263	41474264	chr8:41474264:G:T	rs72633863	G	T	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	41783127	41783128	chr8:41783128:G:C	rs10958697	G	C	C	Alx1.mouse_homeodomain_1	9	1	+	8.298017703190137	8.723290559459702	CCTAATTAAG
chr8	41783138	41783139	chr8:41783139:G:A	rs12156072	G	A	G	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr8	41816410	41816411	chr8:41816411:T:A	rs2010743	T	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	42245973	42245974	chr8:42245974:A:G	rs184395553	A	G	A	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	42898008	42898009	chr8:42898009:T:C	rs116884520	T	C	T	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	47736047	47736048	chr8:47736048:C:G	rs149306870	C	G	C	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr8	47736323	47736324	chr8:47736324:T:C	rs543678881	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	9.133492773520002	6.236398264183626	TTTAATTAAA
chr8	49219695	49219696	chr8:49219696:A:G	rs7013102	A	G	A	Alx1.mouse_homeodomain_1	9	1	+	8.346039445977318	7.662075066399709	CCTAATTACA
chr8	50003560	50003561	chr8:50003561:G:A	rs12681482	G	A	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	52615643	52615644	chr8:52615644:T:C	rs4637853	T	C	T	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	52948663	52948664	chr8:52948664:T:C	rs684070	T	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr8	53411952	53411953	chr8:53411953:C:T	rs140594593	C	T	C	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr8	53537334	53537335	chr8:53537335:T:G	rs16922709	T	G	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	53608027	53608028	chr8:53608028:A:G	rs7388300	A	G	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	53884641	53884642	chr8:53884642:A:G	rs77006324	A	G	A	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	54124504	54124505	chr8:54124505:C:G	rs79465179	C	G	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	54457036	54457037	chr8:54457037:A:C	rs12234926	A	C	A	Alx1.mouse_homeodomain_1	4	1	+	8.312052953791037	2.8502863030698813	TCTAATTATC
chr8	54467788	54467789	chr8:54467789:T:C	rs551382520	T	C	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	54690346	54690347	chr8:54690347:A:T	rs9650311	A	T	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	55955505	55955506	chr8:55955506:G:A	rs56181546	G	A	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	57519395	57519396	chr8:57519396:G:T	rs59467808	G	T	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	57798809	57798810	chr8:57798810:C:T	rs13260843	C	T	c	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	57798810	57798811	chr8:57798811:G:A	rs7838994	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	9.292909885781963	8.556294283327654	TCTAATTAAC
chr8	57804698	57804699	chr8:57804699:A:G	rs150780614	A	G	A	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	57850494	57850495	chr8:57850495:A:T	rs2117890	A	T	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	57929190	57929191	chr8:57929191:A:G	rs9650142	A	G	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr8	58196521	58196522	chr8:58196522:G:A	rs77222148	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	58355775	58355776	chr8:58355776:G:A	rs10216963	G	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	58851350	58851351	chr8:58851351:T:C	rs1075418	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.061628744770331	3.0899490917495904	TCCAATTACA
chr8	58945310	58945311	chr8:58945311:G:T	rs117720859	G	T	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr8	59014887	59014888	chr8:59014888:C:G	rs7007391	C	G	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr8	59014888	59014889	chr8:59014889:C:T	rs410519	C	T	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	59109937	59109938	chr8:59109938:A:C	rs4509306	A	C	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	59316892	59316893	chr8:59316893:A:G	rs4237032	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	7.49200941844807	2.5203297654273293	CCCAATTACA
chr8	59351333	59351334	chr8:59351334:A:G	rs953554045	A	G	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	59694438	59694439	chr8:59694439:T:A	rs185458102	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	59869232	59869233	chr8:59869233:T:C	rs56933815	T	C	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	60198518	60198519	chr8:60198519:C:T	rs10086417	C	T	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	60651387	60651388	chr8:60651388:C:T	rs78542490	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	60919887	60919888	chr8:60919888:C:T	rs58187777	C	T	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	60944211	60944212	chr8:60944212:T:A	rs61118409	T	A	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	61245944	61245945	chr8:61245945:A:T	rs2978556	A	T	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	61308343	61308344	chr8:61308344:C:T	rs2978565	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr8	61710944	61710945	chr8:61710945:G:T	rs28587878	G	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	62920602	62920603	chr8:62920603:A:G	rs7014513	A	G	.	Alx1.mouse_homeodomain_1	8	1	+	8.874801250211958	8.74067261241241	TTTAATTAAC
chr8	63117168	63117169	chr8:63117169:A:C	rs2117696	A	C	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	63823821	63823822	chr8:63823822:T:G	rs705985	T	G	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	64674147	64674148	chr8:64674148:T:G	rs13260704	T	G	G	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr8	64695902	64695903	chr8:64695903:A:G	rs7815372	A	G	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr8	66011368	66011369	chr8:66011369:G:A	rs116972997	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	66114445	66114446	chr8:66114446:T:C	rs7838582	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.1279520552385	5.521132165389809	CCCAATTAAA
chr8	66463283	66463284	chr8:66463284:T:C	rs2555575	T	C	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	66513901	66513902	chr8:66513902:G:A	rs17322654	G	A	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr8	67063660	67063661	chr8:67063661:G:A	rs73691192	G	A	A	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	67490643	67490644	chr8:67490644:T:C	rs73262688	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	67884555	67884556	chr8:67884556:A:G	rs4385454	A	G	A	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr8	67910116	67910117	chr8:67910117:C:G	rs34561815	C	G	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	68357145	68357146	chr8:68357146:G:A	rs814440	G	A	A	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr8	68729266	68729267	chr8:68729267:T:A	rs55821789	T	A	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr8	69075553	69075554	chr8:69075554:C:T	rs17694417	C	T	T	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr8	69399106	69399107	chr8:69399107:A:T	rs74634933	A	T	A	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	69958620	69958621	chr8:69958621:C:T	rs364641	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	69971570	69971571	chr8:69971571:C:T	rs6983569	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	69979932	69979933	chr8:69979933:C:T	rs79321069	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	70049193	70049194	chr8:70049194:C:T	rs7822888	C	T	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	71830939	71830940	chr8:71830940:A:G	rs10099332	A	G	G	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	71830940	71830941	chr8:71830941:G:T	rs115195646	G	T	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	71869007	71869008	chr8:71869008:T:C	rs9643633	T	C	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	72108018	72108019	chr8:72108019:T:C	rs16938029	T	C	T	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	72573856	72573857	chr8:72573857:G:A	rs1431651	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.8208649373008745	7.9549935751004215	GCTAATTAGC
chr8	72613764	72613765	chr8:72613765:T:C	rs55847011	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	72613807	72613808	chr8:72613808:T:G	rs10957608	T	G	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	72864838	72864839	chr8:72864839:A:C	rs565323656	A	C	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr8	72965477	72965478	chr8:72965478:C:T	rs11985784	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr8	73166193	73166194	chr8:73166194:T:C	rs60868269	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr8	73604893	73604894	chr8:73604894:T:C	rs59642272	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	7.735131894130908	2.747409977861927	CCCAATTAGC
chr8	74913563	74913564	chr8:74913564:G:A	rs2731985	G	A	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	75317965	75317966	chr8:75317966:T:C	rs72658038	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.312052953791037	3.3243310375220547	TCTAATTATC
chr8	75332465	75332466	chr8:75332466:G:A	rs150934963	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	75724301	75724302	chr8:75724302:G:A	rs16939148	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	75724305	75724306	chr8:75724306:G:T	rs4735694	G	T	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	76252748	76252749	chr8:76252749:G:A	rs2082216	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	77737155	77737156	chr8:77737156:C:T	rs1519345	C	T	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr8	78011967	78011968	chr8:78011968:T:C	rs13258410	T	C	T	Alx1.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	79018014	79018015	chr8:79018015:C:T	rs78607600	C	T	.	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	79183600	79183601	chr8:79183601:A:G	rs62519421	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr8	79799823	79799824	chr8:79799824:T:G	rs62514916	T	G	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	79822225	79822226	chr8:79822226:A:G	rs72684769	A	G	A	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	79891737	79891738	chr8:79891738:C:G	rs188703001	C	G	C	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	79924247	79924248	chr8:79924248:G:A	rs547863828	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr8	79960393	79960394	chr8:79960394:C:T	rs16907345	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr8	80091626	80091627	chr8:80091627:T:A	rs77670834	T	A	T	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	80143411	80143412	chr8:80143412:G:A	rs112752084	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	80149212	80149213	chr8:80149213:C:T	rs62516124	C	T	C	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	80247593	80247594	chr8:80247594:G:A	chr8:80247594:G:A	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	81555207	81555208	chr8:81555208:C:T	rs2581540	C	T	c	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr8	82354042	82354043	chr8:82354043:G:T	rs2045977	G	T	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr8	82360851	82360852	chr8:82360852:T:G	rs1031874	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	82360860	82360861	chr8:82360861:G:A	rs17720831	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	82961572	82961573	chr8:82961573:T:A	rs34422111	T	A	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	83042528	83042529	chr8:83042529:T:C	rs13271847	T	C	T	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	83073730	83073731	chr8:83073731:A:T	rs2122345	A	T	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr8	83704378	83704379	chr8:83704379:G:T	rs4323468	G	T	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr8	83858349	83858350	chr8:83858350:T:G	rs4512378	T	G	T	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	84897740	84897741	chr8:84897741:G:A	rs117437299	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	84900976	84900977	chr8:84900977:G:T	rs1346290	G	T	T	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr8	85007463	85007464	chr8:85007464:C:G	rs2896440	C	G	g	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	85959990	85959991	chr8:85959991:A:C	rs56381325	A	C	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr8	86176302	86176303	chr8:86176303:A:G	rs143917860	A	G	A	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	86706561	86706562	chr8:86706562:A:G	rs115400729	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.563442743761213	3.5917630907404723	TCCAATTAGA
chr8	88132506	88132507	chr8:88132507:C:T	rs28907614	C	T	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	89259846	89259847	chr8:89259847:T:C	rs7835496	T	C	C	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	89760981	89760982	chr8:89760982:G:A	rs390993	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	89799652	89799653	chr8:89799653:G:A	rs73694493	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	7.802937221462287	7.458022926261789	TCCAATTACC
chr8	90473349	90473350	chr8:90473350:A:T	rs1028255	A	T	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	91603179	91603180	chr8:91603180:T:C	rs843075	T	C	T	Alx1.mouse_homeodomain_1	7	1	-	8.087347922669274	2.1604439355092095	CCTAATTACC
chr8	93020514	93020515	chr8:93020515:G:T	rs2339774	G	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr8	93694527	93694528	chr8:93694528:G:T	rs77809716	G	T	G	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	93944239	93944240	chr8:93944240:G:C	rs78694574	G	C	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr8	94147575	94147576	chr8:94147576:T:A	rs10504933	T	A	T	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr8	94358689	94358690	chr8:94358690:T:C	rs2515161	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	94435905	94435906	chr8:94435906:C:T	rs2930964	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr8	94928571	94928572	chr8:94928572:A:G	rs2459965	A	G	A	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	94977354	94977355	chr8:94977355:T:A	rs10098025	T	A	a	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	95005768	95005769	chr8:95005769:A:G	rs180965318	A	G	A	Alx1.mouse_homeodomain_1	2	1	-	9.551601409090008	8.69757138156076	TCTAATTAAA
chr8	95017881	95017882	chr8:95017882:T:C	rs16917224	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr8	96097228	96097229	chr8:96097229:C:G	rs10955060	C	G	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	96261314	96261315	chr8:96261315:G:A	rs3808386	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.8208649373008745	7.9549935751004215	GCTAATTAGC
chr8	96575578	96575579	chr8:96575579:A:G	rs2589190	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	97105078	97105079	chr8:97105079:G:T	rs73268778	G	T	G	Alx1.mouse_homeodomain_1	2	1	-	7.886642584883163	6.647828709103172	TTCAATTAGC
chr8	97226038	97226039	chr8:97226039:A:G	rs13261274	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr8	97265514	97265515	chr8:97265515:C:T	rs117707026	C	T	C	Alx1.mouse_homeodomain_1	0	1	+	7.233317895140026	7.802937221462287	CCCAATTACC
chr8	97265519	97265520	chr8:97265520:T:C	rs62507229	T	C	C	Alx1.mouse_homeodomain_1	5	1	+	7.233317895140026	2.2455959788710453	CCCAATTACC
chr8	97778187	97778188	chr8:97778188:A:G	rs72671587	A	G	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	97824420	97824421	chr8:97824421:G:A	rs2513955	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	97867695	97867696	chr8:97867696:A:G	chr8:97867696:A:G	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	98162890	98162891	chr8:98162891:A:G	rs2514342	A	G	G	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	98495565	98495566	chr8:98495566:C:T	rs577375298	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	99636939	99636940	chr8:99636940:C:T	rs74749458	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr8	99715643	99715644	chr8:99715644:T:C	rs1667631	T	C	T	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr8	100158691	100158692	chr8:100158692:T:C	rs73279006	T	C	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	100376973	100376974	chr8:100376974:T:C	rs17339850	T	C	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	100416917	100416918	chr8:100416918:C:T	rs535611334	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	100442169	100442170	chr8:100442170:A:G	rs76013354	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.8478534449682	3.860131528699219	CCTAATTAGA
chr8	101172683	101172684	chr8:101172684:T:C	rs76850241	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	101206922	101206923	chr8:101206923:A:C	rs1017225397	A	C	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	101327004	101327005	chr8:101327005:G:A	rs16899281	G	A	G	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	101604362	101604363	chr8:101604363:T:G	rs117135803	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	101607043	101607044	chr8:101607044:G:A	rs7845751	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	101638713	101638714	chr8:101638714:G:A	rs2892326	G	A	g	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	101745539	101745540	chr8:101745540:C:T	rs10955274	C	T	T	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	101769875	101769876	chr8:101769876:A:G	rs144606040	A	G	A	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	101986858	101986859	chr8:101986859:A:C	rs11786361	A	C	A	Alx1.mouse_homeodomain_1	2	1	-	8.589161921660155	5.58966436716515	CCTAATTAGC
chr8	102012300	102012301	chr8:102012301:C:T	rs189902680	C	T	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	102405494	102405495	chr8:102405495:T:C	rs28421590	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr8	102653138	102653139	chr8:102653139:C:A	rs187659155	C	A	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	102790530	102790531	chr8:102790531:C:T	rs62522569	C	T	C	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	104223134	104223135	chr8:104223135:C:T	rs538966497	C	T	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	104720317	104720318	chr8:104720318:C:G	rs1992211	C	G	c	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr8	104952673	104952674	chr8:104952674:T:C	rs13249889	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	104952704	104952705	chr8:104952705:T:C	rs114019393	T	C	T	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	106378167	106378168	chr8:106378168:C:T	rs7833269	C	T	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	106398570	106398571	chr8:106398571:C:A	rs12547728	C	A	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	106416092	106416093	chr8:106416093:A:C	rs2000866	A	C	C	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr8	107180275	107180276	chr8:107180276:T:C	rs147177619	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.304751220453168	5.407656711116794	TCCAATTAGC
chr8	107196319	107196320	chr8:107196320:G:A	rs763561391	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	107460894	107460895	chr8:107460895:C:T	rs79779337	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr8	108247037	108247038	chr8:108247038:A:C	rs1148149	A	C	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr8	108468540	108468541	chr8:108468541:A:G	rs981019	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr8	108906814	108906815	chr8:108906815:C:T	rs6988622	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr8	109082790	109082791	chr8:109082791:A:C	chr8:109082791:A:C	A	C	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	109572196	109572197	chr8:109572197:A:G	rs6988341	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.23885861342153	3.2671789604007873	TTTAATTACC
chr8	109652582	109652583	chr8:109652583:G:A	rs57877857	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	7.9549935751004215	7.536884939530416	GCTAATTAAC
chr8	110416323	110416324	chr8:110416324:C:A	rs7814046	C	A	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	111237045	111237046	chr8:111237046:G:A	rs73325851	G	A	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	112150004	112150005	chr8:112150005:T:C	rs7831133	T	C	C	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	112525441	112525442	chr8:112525442:C:T	rs34737059	C	T	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	114122931	114122932	chr8:114122932:T:C	rs62542929	T	C	T	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	114766536	114766537	chr8:114766537:C:T	rs4876580	C	T	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	115348735	115348736	chr8:115348736:A:G	rs777596	A	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	115669496	115669497	chr8:115669497:C:G	rs76321771	C	G	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	115775841	115775842	chr8:115775842:T:C	rs117759059	T	C	T	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr8	116056713	116056714	chr8:116056714:T:C	rs6997637	T	C	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr8	116631533	116631534	chr8:116631534:G:A	rs9650068	G	A	G	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	117732210	117732211	chr8:117732211:A:T	rs3105768	A	T	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	118095965	118095966	chr8:118095966:G:A	rs7010382	G	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	118463908	118463909	chr8:118463909:G:A	rs6981538	G	A	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr8	119072025	119072026	chr8:119072026:A:G	rs1464182497	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr8	119929712	119929713	chr8:119929713:G:T	rs7007554	G	T	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	120198010	120198011	chr8:120198011:C:T	rs2305599	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	120216783	120216784	chr8:120216784:T:G	rs4870724	T	G	G	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	120405496	120405497	chr8:120405497:G:A	rs7820316	G	A	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	120630784	120630785	chr8:120630785:G:A	rs4324958	G	A	A	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	120878867	120878868	chr8:120878868:T:C	rs13279396	T	C	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	121237595	121237596	chr8:121237596:C:T	rs6988416	C	T	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	121328745	121328746	chr8:121328746:C:T	rs17276050	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	121406301	121406302	chr8:121406302:C:T	rs16895331	C	T	T	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	121611020	121611021	chr8:121611021:A:T	rs10956052	A	T	a	Alx1.mouse_homeodomain_1	2	1	-	8.74067261241241	6.647828709103172	TTTAATTAGC
chr8	122185703	122185704	chr8:122185704:T:C	rs73709568	T	C	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr8	122268840	122268841	chr8:122268841:T:C	rs57580753	T	C	T	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	122428736	122428737	chr8:122428737:T:C	rs75539272	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	123022510	123022511	chr8:123022511:T:C	rs889845518	T	C	T	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr8	123227092	123227093	chr8:123227093:G:T	rs55705246	G	T	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr8	123273479	123273480	chr8:123273480:C:G	rs1032941803	C	G	C	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr8	123485802	123485803	chr8:123485803:A:G	rs6999471	A	G	A	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr8	123565180	123565181	chr8:123565181:T:C	rs72709099	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	123630436	123630437	chr8:123630437:C:G	rs76043705	C	G	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr8	123945723	123945724	chr8:123945724:A:C	rs4871444	A	C	A	Alx1.mouse_homeodomain_1	3	1	+	7.940983387749356	3.810570693818894	ACTAATTAGC
chr8	124044800	124044801	chr8:124044801:T:G	chr8:124044801:T:G	T	G	T	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	124200685	124200686	chr8:124200686:C:T	rs116035685	C	T	c	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr8	124200725	124200726	chr8:124200726:C:A	rs566406097	C	A	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	125657476	125657477	chr8:125657477:A:G	rs1551405	A	G	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr8	125722211	125722212	chr8:125722212:C:T	chr8:125722212:C:T	C	T	C	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr8	126398256	126398257	chr8:126398257:C:T	rs10094456	C	T	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr8	126810665	126810666	chr8:126810666:C:T	rs34002467	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	8.087347922669274	7.669239287099268	CCTAATTACC
chr8	127395197	127395198	chr8:127395198:A:G	rs10505477	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.01360700198315	3.041927348962409	TCCAATTAAG
chr8	127553324	127553325	chr8:127553325:T:G	rs3924891	T	G	T	Alx1.mouse_homeodomain_1	4	1	-	7.802937221462287	2.3411705707411326	TCCAATTACC
chr8	127734764	127734765	chr8:127734765:C:A	rs117748025	C	A	C	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	127734765	127734766	chr8:127734766:C:A	rs28461617	C	A	c	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr8	127742840	127742841	chr8:127742841:G:A	rs62515808	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	127763564	127763565	chr8:127763565:G:A	rs56284488	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.23885861342153	7.50224301096722	TTTAATTACC
chr8	127895714	127895715	chr8:127895715:T:G	rs4733804	T	G	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	128848420	128848421	chr8:128848421:C:T	rs72726590	C	T	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr8	128973193	128973194	chr8:128973194:A:G	rs11787407	A	G	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	129221246	129221247	chr8:129221247:C:T	rs11787174	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr8	129221256	129221257	chr8:129221257:G:A	rs77939820	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	130030519	130030520	chr8:130030520:A:G	rs7813957	A	G	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr8	130244962	130244963	chr8:130244963:G:A	rs76701071	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	130259642	130259643	chr8:130259643:T:C	rs376437320	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	130528339	130528340	chr8:130528340:G:T	rs11782944	G	T	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr8	130533626	130533627	chr8:130533627:A:C	rs369997961	A	C	A	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr8	130962972	130962973	chr8:130962973:C:T	rs7014917	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	131646073	131646074	chr8:131646074:C:T	rs16904490	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	131862628	131862629	chr8:131862629:G:A	rs78589285	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	131862632	131862633	chr8:131862633:G:A	rs2970615	G	A	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr8	132520689	132520690	chr8:132520690:T:C	rs145349285	T	C	T	Alx1.mouse_homeodomain_1	5	1	+	8.17105328609015	3.1833313698211687	CTTAATTAGC
chr8	132520707	132520708	chr8:132520708:G:C	rs2721882	G	C	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr8	132521268	132521269	chr8:132521269:C:T	rs2721883	C	T	T	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	132955640	132955641	chr8:132955641:G:C	rs885196	G	C	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	133075215	133075216	chr8:133075216:C:T	rs4606039	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	133809914	133809915	chr8:133809915:G:A	rs75037592	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr8	133852015	133852016	chr8:133852016:G:A	rs115689610	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	135346225	135346226	chr8:135346226:G:A	rs882615	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	7.735131894130908	6.998516291676599	CCCAATTAGC
chr8	135825030	135825031	chr8:135825031:C:G	rs117817513	C	G	C	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr8	136290440	136290441	chr8:136290441:T:C	rs13272404	T	C	T	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr8	136452365	136452366	chr8:136452366:C:T	rs7009447	C	T	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr8	137200983	137200984	chr8:137200984:A:T	rs28571696	A	T	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	137598390	137598391	chr8:137598391:A:T	rs950022	A	T	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr8	137614976	137614977	chr8:137614977:G:C	rs149169140	G	C	G	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr8	137789744	137789745	chr8:137789745:A:G	rs6577837	A	G	A	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr8	137793188	137793189	chr8:137793189:G:A	rs6577840	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	138392363	138392364	chr8:138392364:T:C	rs11774641	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	138704358	138704359	chr8:138704359:T:C	rs12546630	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr8	138987111	138987112	chr8:138987112:A:G	rs16909925	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	9.133492773520002	4.161813120499261	TTTAATTAAA
chr8	138987131	138987132	chr8:138987132:T:A	rs11985057	T	A	T	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr8	139357661	139357662	chr8:139357662:G:A	rs16910519	G	A	G	Alx1.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	139496403	139496404	chr8:139496404:C:A	rs2447371	C	A	C	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr8	140610938	140610939	chr8:140610939:G:A	rs7001653	G	A	G	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	140724286	140724287	chr8:140724287:C:T	rs7834669	C	T	C	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr8	140987878	140987879	chr8:140987879:C:A	rs117060567	C	A	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	140987914	140987915	chr8:140987915:A:G	rs11990541	A	G	A	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr8	141079191	141079192	chr8:141079192:T:C	rs10046676	T	C	c	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	141571077	141571078	chr8:141571078:C:T	rs117134600	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr8	141927850	141927851	chr8:141927851:G:T	rs78770361	G	T	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	141966148	141966149	chr8:141966149:C:G	rs76329314	C	G	C	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	141976624	141976625	chr8:141976625:A:G	rs12676273	A	G	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr8	141976626	141976627	chr8:141976627:G:A	rs72698430	G	A	G	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr8	142236023	142236024	chr8:142236024:A:G	rs34643171	A	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr8	142259659	142259660	chr8:142259660:G:A	rs76751760	G	A	g	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr8	142949604	142949605	chr8:142949605:A:G	rs4132142	A	G	a	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr8	142954081	142954082	chr8:142954082:G:A	rs28469769	G	A	G	Alx1.mouse_homeodomain_1	2	1	-	7.49200941844807	8.346039445977318	CCCAATTACA
chr8	143672187	143672188	chr8:143672188:A:G	rs7002650	A	G	T	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr8	144337848	144337849	chr8:144337849:T:A	chr8:144337849:T:A	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	7.309859037861343	1.8858772406449866	CCCAATTAGG
chr8	144892219	144892220	chr8:144892220:T:C	rs2859703	T	C	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	306733	306734	chr9:306734:T:C	rs62533402	T	C	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	392681	392682	chr9:392682:C:T	rs16937757	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr9	448268	448269	chr9:448269:C:T	rs4741957	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	557843	557844	chr9:557844:G:A	rs73371066	G	A	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	904167	904168	chr9:904168:A:G	rs113476485	A	G	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr9	1492256	1492257	chr9:1492257:C:G	rs10961742	C	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	1492265	1492266	chr9:1492266:A:G	rs10961743	A	G	G	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr9	2133932	2133933	chr9:2133933:G:C	rs7029519	G	C	C	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr9	2284639	2284640	chr9:2284640:C:G	rs7043046	C	G	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr9	2355287	2355288	chr9:2355288:T:A	rs10965866	T	A	T	Alx1.mouse_homeodomain_1	7	1	-	9.551601409090008	6.833606386882752	TCTAATTAAA
chr9	2412295	2412296	chr9:2412296:A:G	rs1571840	A	G	G	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr9	2582504	2582505	chr9:2582505:T:C	rs10967054	T	C	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	2596568	2596569	chr9:2596569:C:T	rs1454637	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	2623105	2623106	chr9:2623106:G:A	rs77854824	G	A	G	Alx1.mouse_homeodomain_1	1	1	+	7.846603954486855	7.565469321814631	TGTAATTAGC
chr9	2785084	2785085	chr9:2785085:T:C	rs374708438	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.309859037861343	2.338179384840601	CCCAATTAGG
chr9	2857722	2857723	chr9:2857723:A:G	rs78709673	A	G	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	3012275	3012276	chr9:3012276:G:A	rs7031274	G	A	A	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	3018434	3018435	chr9:3018435:A:C	rs35515607	A	C	A	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	3263107	3263108	chr9:3263108:G:A	chr9:3263108:G:A	G	A	G	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr9	3343830	3343831	chr9:3343831:C:A	rs78425248	C	A	C	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr9	3755994	3755995	chr9:3755995:C:T	rs12686401	C	T	C	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	3981645	3981646	chr9:3981646:T:C	rs12351382	T	C	T	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	4340408	4340409	chr9:4340409:C:A	rs10758608	C	A	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	4679165	4679166	chr9:4679166:C:T	rs116415284	C	T	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr9	4679184	4679185	chr9:4679185:G:A	rs115786505	G	A	G	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	4742120	4742121	chr9:4742121:T:C	rs558817899	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.867637029512398	3.8959573764916557	TCTAATTAAG
chr9	4760537	4760538	chr9:4760538:G:C	rs10815070	G	C	G	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	5062815	5062816	chr9:5062816:C:A	rs61284219	C	A	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	6197376	6197377	chr9:6197377:A:G	rs10975479	A	G	A	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr9	6655055	6655056	chr9:6655056:T:C	rs7031325	T	C	C	Alx1.mouse_homeodomain_1	3	1	-	8.69757138156076	6.09075149171207	TCCAATTAAA
chr9	6795315	6795316	chr9:6795316:A:G	rs71505834	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	6795325	6795326	chr9:6795326:A:T	rs61138496	A	T	A	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	6986043	6986044	chr9:6986044:G:T	rs912210	G	T	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr9	6986044	6986045	chr9:6986045:G:T	rs912209	G	T	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr9	7147777	7147778	chr9:7147778:G:A	rs186357076	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	7178821	7178822	chr9:7178822:T:C	rs891936279	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.49200941844807	2.5203297654273293	CCCAATTACA
chr9	7267175	7267176	chr9:7267176:T:C	rs4740874	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.23885861342153	5.632038723572839	TTTAATTACC
chr9	8013158	8013159	chr9:8013159:G:T	rs9408723	G	T	G	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr9	8179591	8179592	chr9:8179592:G:A	rs10123017	G	A	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr9	8189401	8189402	chr9:8189402:A:G	rs10815780	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	8189407	8189408	chr9:8189408:A:T	rs12350923	A	T	a	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	8189408	8189409	chr9:8189409:T:A	rs12555432	T	A	a	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	8351538	8351539	chr9:8351539:G:C	rs10815830	G	C	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	8718632	8718633	chr9:8718633:T:C	rs16928318	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.422165645528107	7.852546319205846	TCTAATTAGT
chr9	8733360	8733361	chr9:8733361:G:C	rs182866849	G	C	G	Alx1.mouse_homeodomain_1	0	1	-	8.981982082767747	8.213685098408467	CCTAATTAAA
chr9	8851247	8851248	chr9:8851248:G:A	rs35884503	G	A	G	Alx1.mouse_homeodomain_1	11	0	+	0	0	.
chr9	9387948	9387949	chr9:9387949:C:T	rs7469900	C	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr9	9921117	9921118	chr9:9921118:G:A	rs57142535	G	A	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	10121265	10121266	chr9:10121266:A:G	rs184106	A	G	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	10165057	10165058	chr9:10165058:A:G	rs73396370	A	G	A	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	12846077	12846078	chr9:12846078:T:A	rs635655	T	A	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	13049379	13049380	chr9:13049380:C:T	rs10960914	C	T	C	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	13478440	13478441	chr9:13478441:G:T	rs117917021	G	T	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	13478474	13478475	chr9:13478475:G:A	rs913638047	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	13555881	13555882	chr9:13555882:A:G	rs2027069	A	G	G	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr9	13805996	13805997	chr9:13805997:T:G	rs112606360	T	G	T	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	13865892	13865893	chr9:13865893:C:T	rs12342957	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	15135244	15135245	chr9:15135245:A:T	rs78205922	A	T	A	Alx1.mouse_homeodomain_1	15	0	+	0	0	.
chr9	15357728	15357729	chr9:15357729:A:C	rs641274	A	C	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr9	15401640	15401641	chr9:15401641:G:T	rs74726857	G	T	G	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	16034539	16034540	chr9:16034540:G:T	rs3008706	G	T	A	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr9	16079375	16079376	chr9:16079376:A:G	rs1887678	A	G	A	Alx1.mouse_homeodomain_1	6	1	-	8.087347922669274	5.190253413332897	CCTAATTACC
chr9	16501217	16501218	chr9:16501218:G:C	rs10962458	G	C	C	Alx1.mouse_homeodomain_1	1	1	+	7.846603954486855	9.158781247982416	TGTAATTAGC
chr9	16625062	16625063	chr9:16625063:T:C	rs10810579	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.802937221462287	2.8312575684415457	TCCAATTACC
chr9	16722305	16722306	chr9:16722306:C:T	rs10810597	C	T	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	16768708	16768709	chr9:16768709:A:G	rs7859111	A	G	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr9	17323851	17323852	chr9:17323852:C:G	rs17761836	C	G	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	17580293	17580294	chr9:17580294:G:T	rs118073773	G	T	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	18298189	18298190	chr9:18298190:A:G	rs2809852	A	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	18346770	18346771	chr9:18346771:G:A	rs2226017	G	A	A	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	18394050	18394051	chr9:18394051:T:C	rs545998086	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr9	18944493	18944494	chr9:18944494:A:G	rs34388457	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr9	19029550	19029551	chr9:19029551:C:T	rs111977398	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr9	19029551	19029552	chr9:19029552:G:A	rs10811103	G	A	A	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr9	19178583	19178584	chr9:19178584:T:C	rs10964028	T	C	t	Alx1.mouse_homeodomain_1	7	1	-	8.69757138156076	2.770667394400697	TCCAATTAAA
chr9	19284149	19284150	chr9:19284150:T:C	rs10811163	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.886642584883163	2.914962931862422	TTCAATTAGC
chr9	19558818	19558819	chr9:19558819:C:T	rs7858369	C	T	T	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	19700804	19700805	chr9:19700805:T:C	rs12000666	T	C	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	20242732	20242733	chr9:20242733:G:A	rs188973565	G	A	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	20622126	20622127	chr9:20622127:C:T	rs555810827	C	T	c	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr9	20679280	20679281	chr9:20679281:C:T	rs10964656	C	T	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	20921332	20921333	chr9:20921333:A:G	rs12353255	A	G	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	20940130	20940131	chr9:20940131:C:A	rs7041086	C	A	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	21005397	21005398	chr9:21005398:A:C	rs4129715	A	C	C	Alx1.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	21675361	21675362	chr9:21675362:G:A	rs2039586	G	A	G	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	21675373	21675374	chr9:21675374:A:C	rs2039585	A	C	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	21773167	21773168	chr9:21773168:C:G	rs9886831	C	G	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr9	21810531	21810532	chr9:21810532:T:G	rs7871477	T	G	G	Alx1.mouse_homeodomain_1	3	1	-	7.44398767566089	3.3135749817304267	CCCAATTAAG
chr9	22470187	22470188	chr9:22470188:A:T	rs1250291448	A	T	A	Alx1.mouse_homeodomain_1	9	1	+	8.061628744770331	7.066321619007978	TCCAATTACA
chr9	22470200	22470201	chr9:22470201:T:C	rs16906176	T	C	T	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	22600729	22600730	chr9:22600730:A:C	rs10811746	A	C	A	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	23011771	23011772	chr9:23011772:C:G	rs1463008	C	G	C	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr9	23089139	23089140	chr9:23089140:G:T	rs73454582	G	T	G	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	23983556	23983557	chr9:23983557:T:C	rs2218806	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	25913758	25913759	chr9:25913759:G:T	rs985381	G	T	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr9	26163455	26163456	chr9:26163456:A:G	rs2245570	A	G	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	26797829	26797830	chr9:26797830:T:C	rs62544362	T	C	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	26950049	26950050	chr9:26950050:C:T	rs143927861	C	T	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	26974123	26974124	chr9:26974124:G:A	rs34173736	G	A	G	Alx1.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	27353893	27353894	chr9:27353894:A:G	rs117503352	A	G	A	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	27533453	27533454	chr9:27533454:T:C	rs4879541	T	C	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	28327564	28327565	chr9:28327565:C:T	rs6476056	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.23885861342153	7.50224301096722	TTTAATTACC
chr9	28753620	28753621	chr9:28753621:G:T	rs321736	G	T	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr9	28853784	28853785	chr9:28853785:C:T	rs2148784	C	T	C	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	29294453	29294454	chr9:29294454:A:G	rs10126023	A	G	G	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	30771460	30771461	chr9:30771461:G:A	rs147089969	G	A	G	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr9	31054015	31054016	chr9:31054016:A:G	rs1932123	A	G	A	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr9	31104161	31104162	chr9:31104162:T:C	rs11791961	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	31140582	31140583	chr9:31140583:A:T	rs7036866	A	T	A	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	31140625	31140626	chr9:31140626:T:C	rs7022462	T	C	T	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	32821062	32821063	chr9:32821063:A:G	rs664407	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.298017703190137	3.326338050169395	CCTAATTAAG
chr9	33031019	33031020	chr9:33031020:A:C	rs143636261	A	C	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	33140353	33140354	chr9:33140354:A:C	rs7864705	A	C	C	Alx1.mouse_homeodomain_1	3	1	+	9.133492773520002	5.00308007958954	TTTAATTAAA
chr9	33425148	33425149	chr9:33425149:T:G	rs60223038	T	G	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	33506302	33506303	chr9:33506303:T:C	rs10971542	T	C	T	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr9	33510750	33510751	chr9:33510751:T:G	rs370349362	T	G	.	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	33858698	33858699	chr9:33858699:G:A	rs10971744	G	A	G	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr9	34048054	34048055	chr9:34048055:C:T	rs116195421	C	T	C	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr9	34326984	34326985	chr9:34326985:A:G	rs16935533	A	G	A	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr9	35085148	35085149	chr9:35085149:A:G	rs546982	A	G	A	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr9	35258217	35258218	chr9:35258218:C:T	rs144616974	C	T	C	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	35424502	35424503	chr9:35424503:T:C	rs1887783	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	7.802937221462287	7.233317895140026	TCCAATTACC
chr9	35489179	35489180	chr9:35489180:T:C	rs77445063	T	C	t	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	35640947	35640948	chr9:35640948:C:T	rs10814264	C	T	c	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr9	35805136	35805137	chr9:35805137:T:C	rs7864199	T	C	T	Alx1.mouse_homeodomain_1	9	1	+	7.852546319205846	8.589161921660155	CCTAATTAGT
chr9	35890926	35890927	chr9:35890927:A:T	rs7866581	A	T	a	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	36940902	36940903	chr9:36940903:A:C	rs7043783	A	C	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr9	36965654	36965655	chr9:36965655:A:G	rs7044533	A	G	G	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	36988853	36988854	chr9:36988854:T:C	rs7850976	T	C	T	Alx1.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	37076620	37076621	chr9:37076621:A:T	rs62533744	A	T	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr9	37420319	37420320	chr9:37420320:G:A	rs60485412	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.23885861342153	7.50224301096722	TTTAATTACC
chr9	38017332	38017333	chr9:38017333:G:A	rs116986264	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr9	38669434	38669435	chr9:38669435:G:A	rs10973965	G	A	g	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr9	38674218	38674219	chr9:38674219:A:G	rs7861861	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr9	39036022	39036023	chr9:39036023:A:C	rs796651381	A	C	-	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	39036032	39036033	chr9:39036033:G:T	rs796189180	G	T	-	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	41652450	41652451	chr9:41652451:C:T	rs7043599	C	T	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	42370293	42370294	chr9:42370294:C:T	rs1285829586	C	T	c	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	42782325	42782326	chr9:42782326:C:T	rs28466573	C	T	c	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	61634692	61634693	chr9:61634693:G:C	rs74694569	G	C	.	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	62801088	62801089	chr9:62801089:T:C	rs12552831	T	C	.	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr9	62848364	62848365	chr9:62848365:C:T	rs369782934	C	T	.	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr9	67388133	67388134	chr9:67388134:T:C	rs62562294	T	C	t	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	67537583	67537584	chr9:67537584:G:A	rs796598795	G	A	g	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	68499892	68499893	chr9:68499893:C:A	rs7874438	C	A	C	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr9	68782270	68782271	chr9:68782271:G:A	rs75064770	G	A	G	Alx1.mouse_homeodomain_1	0	1	-	8.305181923889696	8.874801250211958	CTTAATTAAC
chr9	68802970	68802971	chr9:68802971:T:C	rs60824041	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.852546319205846	2.8808666661851037	CCTAATTAGT
chr9	69077220	69077221	chr9:69077221:T:G	rs11145063	T	G	T	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	69378122	69378123	chr9:69378123:G:C	rs10867426	G	C	G	Alx1.mouse_homeodomain_1	8	1	+	7.886642584883163	7.384828585892281	TTCAATTAGC
chr9	69546436	69546437	chr9:69546437:A:C	chr9:69546437:A:C	A	C	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	69546444	69546445	chr9:69546445:A:T	chr9:69546445:A:T	A	T	A	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	69916683	69916684	chr9:69916684:G:A	rs10780701	G	A	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	70000952	70000953	chr9:70000953:A:G	rs953372	A	G	G	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr9	70474311	70474312	chr9:70474312:A:T	rs1537874	A	T	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	70680213	70680214	chr9:70680214:T:G	rs10868871	T	G	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr9	70837350	70837351	chr9:70837351:C:G	rs35672482	C	G	C	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr9	70856835	70856836	chr9:70856836:T:C	rs17470958	T	C	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr9	70856866	70856867	chr9:70856867:T:C	rs34543029	T	C	T	Alx1.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	71769770	71769771	chr9:71769771:G:T	rs150725596	G	T	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	72025337	72025338	chr9:72025338:G:T	rs730475	G	T	g	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	72701225	72701226	chr9:72701226:T:G	rs12552056	T	G	T	Alx1.mouse_homeodomain_1	6	1	+	8.69757138156076	3.8824389886768236	TCCAATTAAA
chr9	73161735	73161736	chr9:73161736:A:C	rs10521451	A	C	A	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	73754905	73754906	chr9:73754906:C:A	rs921548248	C	A	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr9	74284999	74285000	chr9:74285000:G:C	rs73651830	G	C	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	74743051	74743052	chr9:74743052:C:T	rs877809	C	T	T	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr9	75131887	75131888	chr9:75131888:T:C	rs2281662	T	C	T	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr9	75131893	75131894	chr9:75131894:G:A	rs181462505	G	A	A	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr9	75176625	75176626	chr9:75176626:A:G	rs773006	A	G	A	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	75358703	75358704	chr9:75358704:G:A	rs7041316	G	A	G	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr9	75453185	75453186	chr9:75453186:A:G	rs500859	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr9	75841784	75841785	chr9:75841785:A:G	rs7031123	A	G	A	Alx1.mouse_homeodomain_1	0	1	+	7.940983387749356	7.8208649373008745	ACTAATTAGC
chr9	75996484	75996485	chr9:75996485:A:G	rs1340507	A	G	A	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	76010318	76010319	chr9:76010319:C:G	rs7875951	C	G	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	76010723	76010724	chr9:76010724:T:C	rs1339248	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr9	76137646	76137647	chr9:76137647:A:G	rs11144761	A	G	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	76307183	76307184	chr9:76307184:T:G	rs2351466	T	G	T	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	76610373	76610374	chr9:76610374:T:C	rs11144977	T	C	T	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr9	76610411	76610412	chr9:76610412:A:C	rs11144978	A	C	C	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	76704133	76704134	chr9:76704134:A:C	rs620476	A	C	C	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	76790016	76790017	chr9:76790017:A:G	chr9:76790017:A:G	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.305181923889696	3.3174600076207157	CTTAATTAAC
chr9	76987559	76987560	chr9:76987560:G:A	rs10869860	G	A	g	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	77228768	77228769	chr9:77228769:A:G	rs12343878	A	G	A	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	77598826	77598827	chr9:77598827:G:A	rs17788791	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	77598832	77598833	chr9:77598833:C:T	rs34839153	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.44398767566089	7.025879040090884	CCCAATTAAG
chr9	78440008	78440009	chr9:78440009:A:T	rs7039065	A	T	A	Alx1.mouse_homeodomain_1	7	1	+	7.852546319205846	5.13455129699859	CCTAATTAGT
chr9	79395820	79395821	chr9:79395821:G:A	rs117059072	G	A	G	Alx1.mouse_homeodomain_1	9	1	-	8.723290559459702	7.986674957005393	CCTAATTAAC
chr9	79571223	79571224	chr9:79571224:C:G	rs73652214	C	G	C	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	79895394	79895395	chr9:79895395:C:T	rs116722381	C	T	C	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr9	80062773	80062774	chr9:80062774:A:T	rs62570581	A	T	A	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr9	80466080	80466081	chr9:80466081:A:T	rs745968	A	T	A	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	80673491	80673492	chr9:80673492:G:A	rs79720832	G	A	G	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr9	80673492	80673493	chr9:80673493:G:A	rs75290178	G	A	G	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	81465763	81465764	chr9:81465764:C:G	rs552076815	C	G	C	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	81636345	81636346	chr9:81636346:A:C	rs942601065	A	C	A	Alx1.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	81680220	81680221	chr9:81680221:G:A	rs7043136	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	81694032	81694033	chr9:81694033:G:A	rs2796441	G	A	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr9	82406842	82406843	chr9:82406843:G:C	rs112814855	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.981982082767747	7.6698047892721855	CCTAATTAAA
chr9	82489079	82489080	chr9:82489080:T:C	rs112397981	T	C	T	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	82706922	82706923	chr9:82706923:A:G	rs492860	A	G	G	Alx1.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	82793464	82793465	chr9:82793465:C:G	rs4578027	C	G	G	Alx1.mouse_homeodomain_1	9	1	+	8.312052953791037	7.886780097521472	TCTAATTATC
chr9	83367623	83367624	chr9:83367624:T:C	rs7847924	T	C	C	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	83385810	83385811	chr9:83385811:T:G	rs72745016	T	G	t	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	83401918	83401919	chr9:83401919:G:T	rs10868004	G	T	G	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	83509773	83509774	chr9:83509774:C:T	rs559843771	C	T	C	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	83674544	83674545	chr9:83674545:T:C	rs7045761	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	83980482	83980483	chr9:83980483:G:C	rs183235415	G	C	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	84543132	84543133	chr9:84543133:C:G	rs10868190	C	G	C	Alx1.mouse_homeodomain_1	14	0	-	0	0	.
chr9	84718826	84718827	chr9:84718827:G:A	rs2489162	G	A	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	84894823	84894824	chr9:84894824:A:C	rs12346884	A	C	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	85098789	85098790	chr9:85098790:T:C	rs13293921	T	C	T	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	85111096	85111097	chr9:85111097:C:T	rs4877295	C	T	T	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	85229100	85229101	chr9:85229101:C:T	rs11140900	C	T	c	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	85402294	85402295	chr9:85402295:C:T	rs1190850087	C	T	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr9	86455276	86455277	chr9:86455277:G:A	rs139082055	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.735131894130908	7.869260531930455	CCCAATTAGC
chr9	86503490	86503491	chr9:86503491:A:G	rs12002204	A	G	A	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	86605183	86605184	chr9:86605184:A:G	rs114492405	A	G	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	86923012	86923013	chr9:86923013:A:C	rs1022994	A	C	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	87116536	87116537	chr9:87116537:C:A	rs1348561	C	A	A	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	87591090	87591091	chr9:87591091:G:A	rs1473180	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr9	87649410	87649411	chr9:87649411:A:G	rs3118873	A	G	A	Alx1.mouse_homeodomain_1	19	0	+	0	0	.
chr9	88033481	88033482	chr9:88033482:C:T	rs10122903	C	T	.	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr9	88252820	88252821	chr9:88252821:A:C	rs7031912	A	C	-	Alx1.mouse_homeodomain_1	6	1	-	7.802937221462287	2.98780482857835	TCCAATTACC
chr9	88252829	88252830	chr9:88252830:G:A	rs10780915	G	A	-	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	88381495	88381496	chr9:88381496:A:G	rs764727337	A	G	A	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr9	89463602	89463603	chr9:89463603:G:C	rs4877094	G	C	G	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr9	89662294	89662295	chr9:89662295:A:G	rs1109998	A	G	A	Alx1.mouse_homeodomain_1	0	1	-	7.886642584883163	7.317023258560902	TTCAATTAGC
chr9	89839842	89839843	chr9:89839843:G:T	rs36167018	G	T	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	89873064	89873065	chr9:89873065:G:A	rs1041687022	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	90301217	90301218	chr9:90301218:T:G	rs1754076	T	G	G	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	90301227	90301228	chr9:90301228:T:C	rs1754075	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	7.879478364183603	7.309859037861343	TCCAATTAGG
chr9	90538282	90538283	chr9:90538283:A:G	rs7852932	A	G	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr9	90858680	90858681	chr9:90858681:G:A	rs290203	G	A	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	91026730	91026731	chr9:91026731:G:C	rs296625	G	C	G	Alx1.mouse_homeodomain_1	9	1	-	7.233317895140026	6.8080450388704605	CCCAATTACC
chr9	91742090	91742091	chr9:91742091:C:T	rs150286144	C	T	C	Alx1.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	91746417	91746418	chr9:91746418:T:C	rs3935601	T	C	T	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr9	91934807	91934808	chr9:91934808:A:G	rs117451286	A	G	A	Alx1.mouse_homeodomain_1	17	0	-	0	0	.
chr9	91934825	91934826	chr9:91934826:C:A	rs7038397	C	A	C	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	91951085	91951086	chr9:91951086:T:C	rs10820926	T	C	T	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr9	92094693	92094694	chr9:92094694:G:A	chr9:92094694:G:A	G	A	-	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr9	92678345	92678346	chr9:92678346:A:C	rs10992404	A	C	A	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	92686098	92686099	chr9:92686099:A:C	rs10992414	A	C	a	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	92721220	92721221	chr9:92721221:A:G	rs10992433	A	G	A	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr9	92929039	92929040	chr9:92929040:A:G	rs6479440	A	G	G	Alx1.mouse_homeodomain_1	6	1	-	9.551601409090008	6.654506899753632	TCTAATTAAA
chr9	93025022	93025023	chr9:93025023:C:T	rs34274030	C	T	C	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr9	93025031	93025032	chr9:93025032:C:T	rs79885005	C	T	C	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr9	93502373	93502374	chr9:93502374:T:C	rs16909199	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	7.44398767566089	4.837167785812199	CCCAATTAAG
chr9	93974421	93974422	chr9:93974422:G:A	rs1933670	G	A	G	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	94263696	94263697	chr9:94263697:C:T	rs3131899	C	T	C	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr9	94413817	94413818	chr9:94413818:C:T	rs9632920	C	T	c	Alx1.mouse_homeodomain_1	23	0	-	0	0	.
chr9	94619428	94619429	chr9:94619429:A:G	rs4574908	A	G	A	Alx1.mouse_homeodomain_1	4	1	+	8.91565877229958	3.9439791192788376	TCTAATTACA
chr9	95080196	95080197	chr9:95080197:T:G	rs17679141	T	G	T	Alx1.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	95297573	95297574	chr9:95297574:T:G	rs4647376	T	G	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	95747061	95747062	chr9:95747062:A:G	rs1093398	A	G	G	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr9	95748855	95748856	chr9:95748856:T:C	rs700965	T	C	C	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	95887884	95887885	chr9:95887885:A:G	rs56063686	A	G	A	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr9	96075145	96075146	chr9:96075146:C:A	rs35187581	C	A	C	Alx1.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	96164844	96164845	chr9:96164845:C:T	rs2147256	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	96449657	96449658	chr9:96449658:A:G	rs79671858	A	G	A	Alx1.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	96449676	96449677	chr9:96449677:G:A	rs537090981	G	A	G	Alx1.mouse_homeodomain_1	9	1	+	7.309859037861343	7.993823417438953	CCCAATTAGG
chr9	97307537	97307538	chr9:97307538:G:A	rs73559834	G	A	G	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	97858129	97858130	chr9:97858130:T:C	rs4460498	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.312052953791037	3.3403733007702945	TCTAATTATC
chr9	97874841	97874842	chr9:97874842:C:T	rs75791738	C	T	C	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	98065935	98065936	chr9:98065936:C:T	rs113350892	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	98149228	98149229	chr9:98149229:A:G	rs715910	A	G	A	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr9	98274983	98274984	chr9:98274984:C:T	rs7859655	C	T	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr9	98341381	98341382	chr9:98341382:A:C	rs1435251	A	C	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr9	98481569	98481570	chr9:98481570:T:C	rs2779548	T	C	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	98504948	98504949	chr9:98504949:T:C	rs11789969	T	C	C	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	98555638	98555639	chr9:98555639:C:T	rs2900512	C	T	T	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	98806709	98806710	chr9:98806710:T:A	rs11791355	T	A	T	Alx1.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	98911316	98911317	chr9:98911317:T:C	rs80131783	T	C	T	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr9	99027397	99027398	chr9:99027398:G:A	rs58180460	G	A	G	Alx1.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	99038569	99038570	chr9:99038570:C:T	rs41283638	C	T	C	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	99346907	99346908	chr9:99346908:G:A	rs734251	G	A	G	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	100309101	100309102	chr9:100309102:A:T	rs7035619	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	8.23885861342153	2.8148768162051736	TTTAATTACC
chr9	100774518	100774519	chr9:100774519:C:T	rs1933794	C	T	T	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	101809481	101809482	chr9:101809482:T:C	rs4743491	T	C	C	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr9	101940812	101940813	chr9:101940813:T:C	rs10760820	T	C	C	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	101940817	101940818	chr9:101940818:C:G	rs111555431	C	G	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	102427092	102427093	chr9:102427093:A:C	rs10990081	A	C	A	Alx1.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	102745637	102745638	chr9:102745638:A:G	rs4743577	A	G	G	Alx1.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	102760986	102760987	chr9:102760987:T:C	rs78717165	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.346039445977318	3.3743597929565765	CCTAATTACA
chr9	103904548	103904549	chr9:103904549:T:C	rs10990986	T	C	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	104143526	104143527	chr9:104143527:T:A	rs77250904	T	A	A	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	104579342	104579343	chr9:104579343:T:C	rs12552267	T	C	T	Alx1.mouse_homeodomain_1	9	1	-	8.91565877229958	8.23169439272197	TCTAATTACA
chr9	104765634	104765635	chr9:104765635:G:A	rs2487714	G	A	G	Alx1.mouse_homeodomain_1	8	1	-	8.91565877229958	8.570744477099081	TCTAATTACA
chr9	104765641	104765642	chr9:104765642:G:A	rs145408637	G	A	G	Alx1.mouse_homeodomain_1	1	1	-	8.91565877229958	8.497550136729574	TCTAATTACA
chr9	104932240	104932241	chr9:104932241:C:T	rs2487042	C	T	C	Alx1.mouse_homeodomain_1	17	0	+	0	0	.
chr9	105044877	105044878	chr9:105044878:A:G	rs10820766	A	G	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	105063748	105063749	chr9:105063749:A:C	rs187364673	A	C	A	Alx1.mouse_homeodomain_1	27	0	-	0	0	.
chr9	105063756	105063757	chr9:105063757:G:T	rs28497830	G	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr9	106111520	106111521	chr9:106111521:T:G	rs893402356	T	G	T	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	106865769	106865770	chr9:106865770:A:G	rs73667301	A	G	A	Alx1.mouse_homeodomain_1	5	1	-	8.1279520552385	3.140230138969519	CCCAATTAAA
chr9	107243274	107243275	chr9:107243275:C:T	rs35062164	C	T	C	Alx1.mouse_homeodomain_1	8	1	+	8.061628744770331	7.716714449569833	TCCAATTACA
chr9	107422735	107422736	chr9:107422736:T:C	rs35936672	T	C	T	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr9	107422759	107422760	chr9:107422760:A:T	rs1891028	A	T	A	Alx1.mouse_homeodomain_1	5	1	-	8.981982082767747	3.5580002855513917	CCTAATTAAA
chr9	107472772	107472773	chr9:107472773:G:A	rs75312582	G	A	G	Alx1.mouse_homeodomain_1	24	0	+	0	0	.
chr9	107949659	107949660	chr9:107949660:G:A	rs2039803	G	A	G	Alx1.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	108083395	108083396	chr9:108083396:T:C	rs10979192	T	C	t	Alx1.mouse_homeodomain_1	12	0	+	0	0	.
chr9	108720571	108720572	chr9:108720572:T:C	rs2417934	T	C	T	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr9	108720580	108720581	chr9:108720581:G:T	rs2900472	G	T	T	Alx1.mouse_homeodomain_1	29	0	+	0	0	.
chr9	109183264	109183265	chr9:109183265:C:T	rs142871474	C	T	A	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr9	109183292	109183293	chr9:109183293:T:C	rs112799892	T	C	T	Alx1.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	109219212	109219213	chr9:109219213:T:C	rs1401632	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	109304387	109304388	chr9:109304388:A:G	rs10979814	A	G	G	Alx1.mouse_homeodomain_1	9	1	+	8.69757138156076	8.01360700198315	TCCAATTAAA
chr9	109477362	109477363	chr9:109477363:C:T	rs75862441	C	T	C	Alx1.mouse_homeodomain_1	26	0	+	0	0	.
chr9	109525660	109525661	chr9:109525661:T:A	rs4978821	T	A	T	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	109772575	109772576	chr9:109772576:G:A	rs1327793	G	A	A	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr9	110578221	110578222	chr9:110578222:T:C	rs74404084	T	C	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr9	110578251	110578252	chr9:110578252:C:T	rs73657607	C	T	T	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	110746227	110746228	chr9:110746228:G:C	rs2846447	G	C	C	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr9	110889799	110889800	chr9:110889800:T:C	rs7037351	T	C	C	Alx1.mouse_homeodomain_1	16	0	+	0	0	.
chr9	110921004	110921005	chr9:110921005:G:A	rs2766992	G	A	A	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr9	111066979	111066980	chr9:111066980:T:G	rs741223	T	G	G	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr9	111095056	111095057	chr9:111095057:T:C	rs7861175	T	C	T	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr9	111482125	111482126	chr9:111482126:T:C	rs10980910	T	C	T	Alx1.mouse_homeodomain_1	6	1	+	8.69757138156076	5.800476872224386	TCCAATTAAA
chr9	111800887	111800888	chr9:111800888:G:A	rs10981080	G	A	G	Alx1.mouse_homeodomain_1	20	0	-	0	0	.
chr9	111942970	111942971	chr9:111942971:G:A	rs75976798	G	A	G	Alx1.mouse_homeodomain_1	18	0	+	0	0	.
chr9	111960607	111960608	chr9:111960608:T:C	rs2418182	T	C	C	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	111987039	111987040	chr9:111987040:C:T	rs2805481	C	T	T	Alx1.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	112383824	112383825	chr9:112383825:C:T	rs12335731	C	T	C	Alx1.mouse_homeodomain_1	1	1	+	7.309859037861343	6.891750402291337	CCCAATTAGG
chr9	112753316	112753317	chr9:112753317:C:T	rs2796035	C	T	T	Alx1.mouse_homeodomain_1	9	1	+	8.656967248991535	7.920351646537226	TCTAATTACC
chr9	113347420	113347421	chr9:113347421:T:A	rs61161242	T	A	T	Alx1.mouse_homeodomain_1	5	1	+	8.656967248991535	3.232985451775179	TCTAATTACC
chr9	114011324	114011325	chr9:114011325:G:A	rs17793015	G	A	G	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	114994335	114994336	chr9:114994336:G:A	rs114503937	G	A	G	Alx1.mouse_homeodomain_1	28	0	+	0	0	.
chr9	114998674	114998675	chr9:114998675:A:G	rs10759748	A	G	A	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	115020202	115020203	chr9:115020203:C:G	rs10982496	C	G	G	Alx1.mouse_homeodomain_1	0	1	+	8.981982082767747	8.213685098408467	CCTAATTAAA
chr9	115022873	115022874	chr9:115022874:G:A	rs72758630	G	A	g	Alx1.mouse_homeodomain_1	29	0	-	0	0	.
chr9	115248042	115248043	chr9:115248043:A:G	rs2989511	A	G	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	115265834	115265835	chr9:115265835:C:T	rs12001569	C	T	C	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	115691850	115691851	chr9:115691851:T:A	rs733387	T	A	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	115774002	115774003	chr9:115774003:G:C	rs2188079	G	C	G	Alx1.mouse_homeodomain_1	1	1	-	8.69757138156076	7.3853940880652	TCCAATTAAA
chr9	115921263	115921264	chr9:115921264:A:T	rs28611225	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	8.061628744770331	4.829851797441069	TCCAATTACA
chr9	115929681	115929682	chr9:115929682:T:C	rs10983015	T	C	T	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr9	115952699	115952700	chr9:115952700:T:A	rs76887630	T	A	t	Alx1.mouse_homeodomain_1	18	0	-	0	0	.
chr9	116156503	116156504	chr9:116156504:G:A	rs28729821	G	A	G	Alx1.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	116623044	116623045	chr9:116623045:A:G	rs16933755	A	G	A	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	116757308	116757309	chr9:116757309:G:A	rs1372330	G	A	G	Alx1.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	116789396	116789397	chr9:116789397:A:C	rs192421562	A	C	A	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr9	116870677	116870678	chr9:116870678:C:T	rs115836334	C	T	C	Alx1.mouse_homeodomain_1	14	0	+	0	0	.
chr9	117757998	117757999	chr9:117757999:T:C	rs7026522	T	C	C	Alx1.mouse_homeodomain_1	6	1	+	8.981982082767747	6.084887573431371	CCTAATTAAA
chr9	119026433	119026434	chr9:119026434:G:A	rs724975	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	7.879478364183603	8.01360700198315	TCCAATTAGG
chr9	119639700	119639701	chr9:119639701:G:A	rs77068602	G	A	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	119639700	119639701	chr9:119639701:G:C	chr9:119639701:G:C	G	C	A	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	120650469	120650470	chr9:120650470:C:G	rs56331312	C	G	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	120915688	120915689	chr9:120915689:G:A	rs62578381	G	A	G	Alx1.mouse_homeodomain_1	8	1	+	8.74067261241241	8.874801250211958	TTTAATTAGC
chr9	120915701	120915702	chr9:120915702:C:A	rs10985090	C	A	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	120932663	120932664	chr9:120932664:T:C	rs7031096	T	C	C	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	120965715	120965716	chr9:120965716:C:T	rs7035682	C	T	T	Alx1.mouse_homeodomain_1	19	0	-	0	0	.
chr9	121076873	121076874	chr9:121076874:G:A	rs7856416	G	A	G	Alx1.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	121076878	121076879	chr9:121076879:G:C	rs7856420	G	C	G	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	121364339	121364340	chr9:121364340:G:A	rs16910566	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	121839182	121839183	chr9:121839183:T:C	rs12348138	T	C	T	Alx1.mouse_homeodomain_1	0	1	+	8.91565877229958	8.346039445977318	TCTAATTACA
chr9	121839203	121839204	chr9:121839204:C:T	rs117163679	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	122084589	122084590	chr9:122084590:C:A	rs72767757	C	A	C	Alx1.mouse_homeodomain_1	20	0	+	0	0	.
chr9	122420443	122420444	chr9:122420444:G:T	rs75508402	G	T	G	Alx1.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	122611445	122611446	chr9:122611446:A:G	rs1329959	A	G	G	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	122901193	122901194	chr9:122901194:A:G	rs77579008	A	G	A	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	123064158	123064159	chr9:123064159:G:C	rs1341046100	G	C	G	Alx1.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	123395523	123395524	chr9:123395524:G:C	rs555214641	G	C	G	Alx1.mouse_homeodomain_1	24	0	-	0	0	.
chr9	123395543	123395544	chr9:123395544:T:C	rs150569560	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	7.735131894130908	2.7634522411101665	CCCAATTAGC
chr9	124190318	124190319	chr9:124190319:G:T	rs75883516	G	T	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	124212524	124212525	chr9:124212525:C:G	rs10818929	C	G	G	Alx1.mouse_homeodomain_1	21	0	-	0	0	.
chr9	124212534	124212535	chr9:124212535:G:A	rs1398395716	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr9	124212546	124212547	chr9:124212547:A:G	rs115633430	A	G	A	Alx1.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	124228840	124228841	chr9:124228841:C:T	rs55641821	C	T	C	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	125339362	125339363	chr9:125339363:A:G	rs416340	A	G	G	Alx1.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	125760245	125760246	chr9:125760246:C:T	rs35888131	C	T	C	Alx1.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	125892217	125892218	chr9:125892218:T:C	rs75001292	T	C	C	Alx1.mouse_homeodomain_1	25	0	-	0	0	.
chr9	126380962	126380963	chr9:126380963:A:G	rs917778	A	G	G	Alx1.mouse_homeodomain_1	16	0	-	0	0	.
chr9	126551254	126551255	chr9:126551255:G:T	rs62578113	G	T	G	Alx1.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	126902859	126902860	chr9:126902860:C:T	rs13293831	C	T	C	Alx1.mouse_homeodomain_1	22	0	+	0	0	.
chr9	128901622	128901623	chr9:128901623:T:G	rs183310557	T	G	T	Alx1.mouse_homeodomain_1	27	0	+	0	0	.
chr9	129387706	129387707	chr9:129387707:T:C	rs7032809	T	C	T	Alx1.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	129482165	129482166	chr9:129482166:C:T	rs968468	C	T	C	Alx1.mouse_homeodomain_1	28	0	-	0	0	.
chr9	129488336	129488337	chr9:129488337:G:A	rs914650597	G	A	g	Alx1.mouse_homeodomain_1	12	0	-	0	0	.
chr9	129488341	129488342	chr9:129488342:T:G	chr9:129488342:T:G	T	G	T	Alx1.mouse_homeodomain_1	7	1	-	8.23885861342153	4.960412730161428	TTTAATTACC
chr9	130288830	130288831	chr9:130288831:T:C	rs947510	T	C	C	Alx1.mouse_homeodomain_1	4	1	-	8.23885861342153	3.2671789604007873	TTTAATTACC
chr9	130481906	130481907	chr9:130481907:G:T	rs480313	G	T	T	Alx1.mouse_homeodomain_1	25	0	+	0	0	.
chr9	130739587	130739588	chr9:130739588:G:A	rs2789769	G	A	A	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	130835986	130835987	chr9:130835987:T:G	rs138630513	T	G	T	Alx1.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	131407166	131407167	chr9:131407167:G:A	rs141039710	G	A	G	Alx1.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	131761474	131761475	chr9:131761475:G:A	rs3012765	G	A	A	Alx1.mouse_homeodomain_1	2	1	-	7.886642584883163	8.74067261241241	TTCAATTAGC
chr9	132514815	132514816	chr9:132514816:C:T	rs4962184	C	T	C	Alx1.mouse_homeodomain_1	23	0	+	0	0	.
chr9	132591338	132591339	chr9:132591339:T:C	rs11243835	T	C	T	Alx1.mouse_homeodomain_1	26	0	-	0	0	.
chr9	133559039	133559040	chr9:133559040:A:G	rs7847448	A	G	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr9	133559063	133559064	chr9:133559064:G:T	rs775368110	G	T	G	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	133715318	133715319	chr9:133715319:G:A	rs2427983	G	A	G	Alx1.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	133884732	133884733	chr9:133884733:T:G	rs35233677	T	G	T	Alx1.mouse_homeodomain_1	10	0	+	0	0	.
chr9	133987809	133987810	chr9:133987810:C:A	rs34288869	C	A	c	Alx1.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	134022603	134022604	chr9:134022604:T:C	rs10993895	T	C	T	Alx1.mouse_homeodomain_1	4	1	-	8.74067261241241	3.768992959391669	TTTAATTAGC
chr9	134198924	134198925	chr9:134198925:G:C	rs940527169	G	C	g	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	134243771	134243772	chr9:134243772:A:T	rs73663443	A	T	T	Alx1.mouse_homeodomain_1	22	0	-	0	0	.
chr9	134367925	134367926	chr9:134367926:C:T	rs529316258	C	T	C	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	134455978	134455979	chr9:134455979:A:G	rs112473792	A	G	A	Alx1.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	135137672	135137673	chr9:135137673:G:A	rs76802846	G	A	G	Alx1.mouse_homeodomain_1	11	0	-	0	0	.
chr9	135261003	135261004	chr9:135261004:C:G	rs10125722	C	G	G	Alx1.mouse_homeodomain_1	10	0	-	0	0	.
chr9	135328400	135328401	chr9:135328401:T:C	rs11794722	T	C	T	Alx1.mouse_homeodomain_1	3	1	-	8.346039445977318	5.739219556128628	CCTAATTACA
chr9	135340460	135340461	chr9:135340461:T:C	rs6538017	T	C	T	Alx1.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	135392710	135392711	chr9:135392711:G:A	rs4841977	G	A	G	Alx1.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	135773225	135773226	chr9:135773226:A:T	rs34257069	A	T	A	Alx1.mouse_homeodomain_1	6	1	-	8.304751220453168	5.072974273123907	TCCAATTAGC
chr9	136049069	136049070	chr9:136049070:A:G	rs906731929	A	G	A	Alx1.mouse_homeodomain_1	3	1	+	7.879478364183603	5.272658474334913	TCCAATTAGG
chr9	136049079	136049080	chr9:136049080:A:C	rs4842090	A	C	A	Alx1.mouse_homeodomain_1	13	0	+	0	0	.
chr9	136093294	136093295	chr9:136093295:A:G	rs1717455	A	G	A	Alx1.mouse_homeodomain_1	13	0	-	0	0	.
chr9	136149481	136149482	chr9:136149482:G:A	rs118097984	G	A	G	Alx1.mouse_homeodomain_1	15	0	-	0	0	.
chr9	136287603	136287604	chr9:136287604:G:A	rs890688333	G	A	G	Alx1.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	136312521	136312522	chr9:136312522:C:T	rs892870590	C	T	C	Alx1.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	136386178	136386179	chr9:136386179:C:T	rs11145824	C	T	C	Alx1.mouse_homeodomain_1	21	0	+	0	0	.
chr9	138016356	138016357	chr9:138016357:G:A	rs78950305	G	A	G	Alx1.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	138179247	138179248	chr9:138179248:G:A	rs2434911	G	A	.	Alx1.mouse_homeodomain_1	-4	0	+	0	0	.