"Systematic Localization of Common Disease-Associated Variation in Regulatory DNA"
The SOM PDF included only correlated DHSs overlapping GWAS SNPs (Table S7). Here is the complete set of 1,073,959 DHSs correlated in the 35 clustered cell types new to Maurano et al.
This file includes genomic coordinates (hg19) of all promoter DHSs and distal, non-promoter DHSs within ±500 kb correlated with them at threshold 0.7. The file format is the same as described for Supplementary Table 7 of the Thurman et al. Nature 2012.
The vectors of peak heights from which the correlations were calculated are available in this file.
This file contains consensus DHS coordinates across the genome;
it is a superset of the data used for the correlation analysis. The vectors are given as comma-delimited lists in column 4. The list order is given in Table S5.
Table S6 drew from assignments originally presented in Thurman et al. Nature 2012. For convenience, here is a link to the complete set of correlated DHSs for this set of cell types. This set is described in Supplementary Table 7 of the SOM.
The vectors of peak heights from which the correlations were calculated are available in this file.
This file contains consensus DHS coordinates across the genome;
it is a superset of the data used for the correlation analysis. The vectors are given as comma-delimited lists in column 4. The list order is given in Table S4.